View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1320_low_74 (Length: 251)

Name: NF1320_low_74
Description: NF1320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1320_low_74
NF1320_low_74
[»] chr3 (13 HSPs)
chr3 (30-251)||(1107246-1107466)
chr3 (31-176)||(1050129-1050274)
chr3 (31-176)||(1077046-1077191)
chr3 (31-176)||(1090852-1090997)
chr3 (31-176)||(1299829-1299974)
chr3 (31-150)||(13854818-13854937)
chr3 (33-145)||(20342703-20342815)
chr3 (33-145)||(5445376-5445488)
chr3 (33-145)||(5849870-5849982)
chr3 (33-145)||(5453959-5454071)
chr3 (33-145)||(5502001-5502113)
chr3 (34-145)||(5489152-5489263)
chr3 (33-145)||(5803443-5803555)
[»] scaffold0090 (1 HSPs)
scaffold0090 (31-150)||(8559-8678)
[»] chr2 (2 HSPs)
chr2 (32-125)||(2662801-2662894)
chr2 (30-113)||(34328559-34328642)
[»] chr5 (2 HSPs)
chr5 (37-150)||(28419616-28419729)
chr5 (37-93)||(22689686-22689742)
[»] chr6 (2 HSPs)
chr6 (31-147)||(3979328-3979444)
chr6 (33-145)||(25810324-25810436)
[»] chr8 (4 HSPs)
chr8 (31-144)||(23555189-23555302)
chr8 (34-116)||(23341769-23341851)
chr8 (55-149)||(23360929-23361023)
chr8 (34-116)||(23385283-23385365)
[»] chr4 (1 HSPs)
chr4 (31-128)||(36438066-36438163)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 1107246 - 1107466
Alignment:
Q  30 gaaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1107246 gaaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgccgaacagaagcttagat 1107345  T
Q  130 tcatttctttttggttagtaactctattaggtttgatcattattatacagttaaattacaatttaatatannnnnnncattttggaaagnnnnnnnnctc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||        |||    
T  1107346 tcatttctttttggttagtaactctattaggtttgatcattattatacagttaaattacaatttaatata-ttttttcattttggaaagaaaaaaaactc 1107444  T
Q  230 taatcaataaaatgaatatttt 251  Q
    ||||||||||||||||||||||    
T  1107445 taatcaataaaatgaatatttt 1107466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 1050129 - 1050274
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  1050129 aaacttcaacaccgaaatcttgttaaggttcttggttgttgcattcaaggagaagagagaatgcttatctatgaatatatgcccaacaaaagcttagatt 1050228  T
Q  131 catttctttttggttagtaactctattaggtttgatcattattata 176  Q
    |||||||||||||| |||| |||||||| | |||| ||||| ||||    
T  1050229 catttctttttggtaagtatctctattaagcttgaacattaatata 1050274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 1077046 - 1077191
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||     
T  1077046 aaacttcaacatcgaaatcttgttaaggttcttggttgttgcattcaaggagaagagagaatgcttatctatgaatatatgcccaacaaaagcttagatg 1077145  T
Q  131 catttctttttggttagtaactctattaggtttgatcattattata 176  Q
    |||||||||||||| |||| |||||||| | |||||||||| ||||    
T  1077146 catttctttttggtgagtatctctattaagcttgatcattaatata 1077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 1090852 - 1090997
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  1090852 aaacttcaacatcgaaatcttgttaaggttcttggttgttgcattcaaggagaagagagaatgcttatctatgaatatatgcccaacaaaagcttagatt 1090951  T
Q  131 catttctttttggttagtaactctattaggtttgatcattattata 176  Q
    |||||||||||||| |||| |||||||| | |||| ||||| ||||    
T  1090952 catttctttttggtaagtatctctattaagcttgaacattaatata 1090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 1299974 - 1299829
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  1299974 aaacttcaacatcgaaatcttgttaaggttcttggttgttgcattcaaggagaagagagaatgcttatctatgaatatatgcccaacaaaagcttagatt 1299875  T
Q  131 catttctttttggttagtaactctattaggtttgatcattattata 176  Q
    |||||||||||||| |||| |||||||| | |||| ||||| ||||    
T  1299874 catttctttttggtgagtatctctattaagcttgaacattaatata 1299829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 13854818 - 13854937
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| | || |||||||| ||| |||||| |||  | ||||    
T  13854818 aaacttcaacaccgaaatcttgtaaaggttgttggttgttgtattgaaggagaagagaaaatgttgatatatgaatacatgtccaacaaaagtctcgatt 13854917  T
Q  131 catttctttttggttagtaa 150  Q
    |||||||||||||| |||||    
T  13854918 catttctttttggtgagtaa 13854937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 20342815 - 20342703
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || || ||| | ||||||||||  ||||||||||||||||| ||||      
T  20342815 acttcaacaccgtaatcttgtaaaacttcttggttgttctattcaacaagatgaaaagatgttgatctatgaattcatgcccaacagaagcttggatttc 20342716  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  20342715 tttatttttggtt 20342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 5445488 - 5445376
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || || ||| | ||||| ||||  ||||||||||||||||| ||||      
T  5445488 acttcaacaccgtaatcttgtaaaacttcttggttgttctattcaacaagatgaaaagatgttgatctacgaattcatgcccaacagaagcttggatttc 5445389  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  5445388 tttatttttggtt 5445376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 5849870 - 5849982
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || ||  || | ||||||||||  ||||||||||||||||| ||||      
T  5849870 acttcaacaccgtaatcttgtaaaacttcttggttgttctattcaacaagatgaaaagttgttgatctatgaattcatgcccaacagaagcttggattac 5849969  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  5849970 tttatttttggtt 5849982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 5454071 - 5453959
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || ||  || | ||||| ||||  ||||||||||||||||| ||||      
T  5454071 acttcaacaccgtaatcttgtaaaacttcttggttgttctattcaacaagatgaaaagttgttgatctacgaattcatgcccaacagaagcttggattgc 5453972  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  5453971 tttatttttggtt 5453959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 5502113 - 5502001
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || ||  || | ||||||||||  ||| ||||||||||||| ||||      
T  5502113 acttcaacaccgtaatcttgttaaacttcttggttgttctattcaacaagatgaaaagttgttgatctatgaattcatggccaacagaagcttggattac 5502014  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  5502013 tttatttttggtt 5502001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 5489263 - 5489152
Alignment:
Q  34 cttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattcat 133  Q
    ||||||||||| |||||||| ||  |||||||||||| ||||| |  |||||| ||  || | ||||||||||  ||| ||||||||||||| ||||  |    
T  5489263 cttcaacaccgtaatcttgtaaaacttcttggttgttctattcgacaagaagaaaagttgttgatctatgaattcatggccaacagaagcttggattact 5489164  T
Q  134 ttctttttggtt 145  Q
    || |||||||||    
T  5489163 ttatttttggtt 5489152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 5803443 - 5803555
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| ||||| || ||  ||||||| |||| |||||||  ||| || ||  || | ||||||||||  ||||||||||||||||| ||||      
T  5803443 acttcaacaccgtaatctagtaaaacttcttggctgttctattcaacaagatgaaaagttgttgatctatgaattcatgcccaacagaagcttggattac 5803542  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  5803543 tttatttttggtt 5803555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 8678 - 8559
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||| | || |||||||| ||| |||||| |||  | |||     
T  8678 aaacttcaacaccgaaatcttgttaaggttgttggttgttgtattgaaggagatgagaaaatgttgatttatgaatacatgtccaacaaaagtctcgata 8579  T
Q  131 catttctttttggttagtaa 150  Q
    |||||||||||||| |||||    
T  8578 catttctttttggtgagtaa 8559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 2662894 - 2662801
Alignment:
Q  32 aacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagctt 125  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||| |  |||||||||||||||| || ||||||||    
T  2662894 aacttcaacatcgaaatctcgtcaagcttcttggttgttgtattcaaggagaagataaaatgttggtctatgaatatatgccaaatagaagctt 2662801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 34328559 - 34328642
Alignment:
Q  30 gaaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcc 113  Q
    |||||||||||||||||||||||| ||| |||||||||||||  || ||||||| |||||||||||  | |||||||| |||||    
T  34328559 gaaacttcaacaccgaaatcttgtaaagcttcttggttgttgccttgaaggagaggagaaaatgctggtttatgaatacatgcc 34328642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 28419616 - 28419729
Alignment:
Q  37 caacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattcatttc 136  Q
    ||||| ||||||||||| ||||||||||||||||| ||| ||||||| || ||| || | ||||||||||| ||||| |||| |||| | ||||||||||    
T  28419616 caacatcgaaatcttgttaaggttcttggttgttgcattgaaggagatgaaaaactgttaatctatgaatacatgccaaacaaaagccttgattcatttc 28419715  T
Q  137 tttttggttagtaa 150  Q
    ||||||||| ||||    
T  28419716 tttttggtttgtaa 28419729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 22689742 - 22689686
Alignment:
Q  37 caacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatg 93  Q
    ||||| ||||||||||| |||||| |||||||||| ||| ||||||| |||||||||    
T  22689742 caacatcgaaatcttgttaaggttattggttgttgcattgaaggagacgagaaaatg 22689686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 3979444 - 3979328
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    |||||||||||||| |||||||||||  ||||||| || || ||| |||||| ||| | |||||| ||||||||||| |||||||||| |||||| || |    
T  3979444 aaacttcaacaccgtaatcttgtcaaacttcttggatgctgcattgaaggaggagaaacaatgctgatctatgaatacatgcccaacaaaagcttggact 3979345  T
Q  131 catttctttttggttag 147  Q
      ||| |||||||||||    
T  3979344 actttgtttttggttag 3979328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 25810324 - 25810436
Alignment:
Q  33 acttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattca 132  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||  ||| || || ||| | ||||| ||||  ||||||||||||||||| ||||      
T  25810324 acttcaacaccgtaatcttgtaaaacttcttggttgttctattcaacaagatgaaaagatgttgatctaagaattcatgcccaacagaagcttggattac 25810423  T
Q  133 tttctttttggtt 145  Q
    ||| |||||||||    
T  25810424 tttatttttggtt 25810436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 23555189 - 23555302
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagatt 130  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||| ||  ||| |||||||| ||  | |||||| | ||| | |||| | |||| ||||    
T  23555189 aaacttcaacaccgaaatcttgttaaggtgattggttgttgcattgaaaaagatgagaaaatactggtttatgaacacatgtcaaacaaaggcttggatt 23555288  T
Q  131 catttctttttggt 144  Q
    ||||| ||||||||    
T  23555289 catttatttttggt 23555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 23341851 - 23341769
Alignment:
Q  34 cttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaa 116  Q
    ||||| ||||| |||||||| ||| |||| ||||||||||||||  |||| || ||| || | ||||||||||| ||||||||    
T  23341851 cttcagcaccgtaatcttgtgaagcttctcggttgttgtattcacagagaggaaaaattgttgatctatgaatacatgcccaa 23341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 23360929 - 23361023
Alignment:
Q  55 aaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttagattcatttctttttggttagta 149  Q
    ||||||||||| | ||| ||| ||| | | |||||| | || |||||||||||||||||||| | ||||||||| |  |||||||||||| ||||    
T  23360929 aaggttcttggcttttgcattgaagaacatgagaaattactcatctatgaatatatgcccaataaaagcttagacttctttctttttggtaagta 23361023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 23385283 - 23385365
Alignment:
Q  34 cttcaacaccgaaatcttgtcaaggttcttggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaa 116  Q
    ||||| ||||| |||||||| ||| |||| ||||||||||||||  |||| || ||| || | ||||||||||| ||||||||    
T  23385283 cttcagcaccgtaatcttgtgaagcttctcggttgttgtattcacagagaggaaaaattgttgatctatgaatacatgcccaa 23385365  T

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Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 36438163 - 36438066
Alignment:
Q  31 aaacttcaacaccgaaatcttgtcaaggttctt-ggttgttgtattcaaggagaagagaaaatgcttatctatgaatatatgcccaacagaagcttaga 128  Q
    |||||||||||| |||||||||| | || |||| ||||| ||  |||||||||||||||| ||| | |||||||| ||| |||| |||| |||||||||    
T  36438163 aaacttcaacacagaaatcttgtga-ggatcttaggttgctgcgttcaaggagaagagaagatgttaatctatgagtatttgcctaacaaaagcttaga 36438066  T

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