View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13210_low_14 (Length: 217)
Name: NF13210_low_14
Description: NF13210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13210_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 36886103 - 36886193
Alignment:
| Q |
114 |
gttgcacatattatttgatccttatttggaaaagttcagattgcattcatggtttgctttcacagatccaaaaaatttcaaggattcaagt |
204 |
Q |
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| T |
36886103 |
gttgcacatattatttgatccttatttggaaaagttcagattgcattcatggtttgctttcacagatccataaaatttcaaggattcaagt |
36886193 |
T |
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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 36886006 - 36886036
Alignment:
| Q |
17 |
atatagcaataaagaggagtacatatctatg |
47 |
Q |
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| T |
36886006 |
atatagcaataaagaggagtacatatctatg |
36886036 |
T |
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