View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13212_high_33 (Length: 250)
Name: NF13212_high_33
Description: NF13212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13212_high_33 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 250
Target Start/End: Original strand, 37719684 - 37719931
Alignment:
| Q |
5 |
tgtccaagtatataatccaaaccctatatgcaccaaggatatactataagctccataaaagccatagtttgttgcaagtagaaattcaaacccttttact |
104 |
Q |
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| T |
37719684 |
tgtccaagcaaataatccaaaccctagaagcaccaaggatatactataagctccataaaagccatagtttgttgcaagtagaaattcaaacccttttact |
37719783 |
T |
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| Q |
105 |
acagggcatgtggttaaggattccatggaatnnnnnnnntgatctatttgagcatagaaatcattaaataattaaaatcacaataaatataagaagcaaa |
204 |
Q |
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| T |
37719784 |
acagggcatgtggttaaggattccatggaataaaaaaaatgatctatttgagcatagaaatcattaaataattaaaatcacaataaatataagaagcaaa |
37719883 |
T |
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| Q |
205 |
tttgacaaacgcctttatactatgtttgaaatt--agtgtgatgtaat |
250 |
Q |
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| T |
37719884 |
tttgacaaacgcctttatactatgtttgaaattagagtgtgatgtaat |
37719931 |
T |
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