View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13212_low_27 (Length: 272)
Name: NF13212_low_27
Description: NF13212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13212_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 44561370 - 44561128
Alignment:
| Q |
17 |
tacaatgcatataatatgagcagaacaaaaaccgtgtgatttgaattcccttttgatttcgggatgtgaacaactgaacatgatttacattttccttgct |
116 |
Q |
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| T |
44561370 |
tacaatgcatataatatgagcagaacaaaaaccgtgtgatttgaattcccttttgatttcgggatgtgaacaactgaacatgatttgcattttccttgct |
44561271 |
T |
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| Q |
117 |
gaatgaatatcaaatgacaatacttgtttcttgtttggactcaaattacaaaacttcaatgaatacttgtgaattcttactaccctgaagttatgattct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44561270 |
gaatgaatatcaaatgacaatacttgtttcttgtttggactcaaattacaaaacttcaatgaatacttgtgaattcttactaccctgaagttatgattct |
44561171 |
T |
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| Q |
217 |
tatggagttgcgtacccatcctctaaagattaaaagatctatt |
259 |
Q |
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| T |
44561170 |
tatggagttgcgtacccatcctctaaagattaaaagatctatt |
44561128 |
T |
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