View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13212_low_39 (Length: 237)
Name: NF13212_low_39
Description: NF13212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13212_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 33504256 - 33504474
Alignment:
| Q |
18 |
aagagttcttacacattacaccattagatgctgcaaacaaccaatggtgtgcaagcataagaaccattcttctataagaacctggnnnnnnnnnn--gta |
115 |
Q |
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| T |
33504256 |
aagagttcttacacattacaccattagatgctgcaaacaaccaatggtgtgcaagcataagaaccattcttctataagaacctggttttttttttttgta |
33504355 |
T |
|
| Q |
116 |
acactaaggttaaacatgtgttaggttttgtggccacaaaaaataattttgtaaaattgattgttgaaagcgagttgaatgtaaattgatagtgtttgga |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |
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| T |
33504356 |
acactaaggttaaacatgtgttaggttttgtggccacaaaaaataattttgtaaaattgattgttgaaagcgagttgaaggtaaattgacagagtttgga |
33504455 |
T |
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| Q |
216 |
ttcattcatgtaaaagtgg |
234 |
Q |
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||||||||||||||||||| |
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| T |
33504456 |
ttcattcatgtaaaagtgg |
33504474 |
T |
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