View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13212_low_6 (Length: 598)

Name: NF13212_low_6
Description: NF13212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13212_low_6
NF13212_low_6
[»] chr2 (44 HSPs)
chr2 (19-417)||(41656350-41656748)
chr2 (427-564)||(6204506-6204643)
chr2 (360-423)||(4003397-4003461)
chr2 (360-423)||(1364802-1364866)
chr2 (360-423)||(11515013-11515077)
chr2 (360-423)||(37194236-37194300)
chr2 (360-419)||(15555394-15555454)
chr2 (360-423)||(34757574-34757638)
chr2 (428-524)||(39063805-39063901)
chr2 (360-423)||(43190587-43190651)
chr2 (360-419)||(43572592-43572652)
chr2 (360-419)||(3737274-3737333)
chr2 (371-423)||(6656087-6656140)
chr2 (360-424)||(26905772-26905837)
chr2 (360-423)||(13018526-13018590)
chr2 (428-524)||(33361755-33361851)
chr2 (360-419)||(36030786-36030846)
chr2 (427-501)||(16871538-16871612)
chr2 (360-409)||(40211986-40212036)
chr2 (428-501)||(20268028-20268101)
chr2 (428-501)||(20268122-20268195)
chr2 (360-419)||(5322167-5322227)
chr2 (360-423)||(21626092-21626156)
chr2 (359-419)||(26051696-26051756)
chr2 (360-423)||(26599297-26599361)
chr2 (428-524)||(34229047-34229143)
chr2 (391-423)||(35412278-35412310)
chr2 (428-467)||(9375273-9375312)
chr2 (441-524)||(10147799-10147882)
chr2 (441-524)||(10148586-10148669)
chr2 (366-417)||(11949881-11949932)
chr2 (380-423)||(21834910-21834953)
chr2 (360-418)||(41100153-41100212)
chr2 (371-425)||(39181045-39181099)
chr2 (390-423)||(16625860-16625893)
chr2 (360-421)||(28539474-28539535)
chr2 (359-419)||(39750124-39750185)
chr2 (428-517)||(41983245-41983334)
chr2 (428-524)||(4854473-4854569)
chr2 (360-416)||(16813611-16813667)
chr2 (360-416)||(16852890-16852946)
chr2 (360-424)||(30523215-30523279)
chr2 (460-524)||(34173832-34173896)
chr2 (359-419)||(35550205-35550265)
[»] chr7 (28 HSPs)
chr7 (428-590)||(18947286-18947448)
chr7 (428-550)||(18948200-18948322)
chr7 (427-585)||(43702721-43702880)
chr7 (360-425)||(42113007-42113072)
chr7 (360-423)||(6746617-6746681)
chr7 (360-423)||(15748997-15749061)
chr7 (360-419)||(45940448-45940508)
chr7 (427-524)||(41347090-41347187)
chr7 (360-416)||(43741681-43741738)
chr7 (360-423)||(4058187-4058251)
chr7 (360-423)||(23466045-23466109)
chr7 (360-416)||(24924628-24924684)
chr7 (360-423)||(38505382-38505446)
chr7 (363-417)||(10592002-10592056)
chr7 (360-420)||(17884242-17884300)
chr7 (360-423)||(16805615-16805679)
chr7 (428-524)||(25675719-25675815)
chr7 (434-509)||(16980477-16980552)
chr7 (360-411)||(30301972-30302023)
chr7 (360-415)||(42267055-42267110)
chr7 (363-408)||(42253942-42253988)
chr7 (428-498)||(46295646-46295716)
chr7 (360-412)||(13697262-13697315)
chr7 (360-409)||(44858149-44858198)
chr7 (360-416)||(19791667-19791723)
chr7 (360-419)||(33872159-33872219)
chr7 (360-416)||(38233784-38233840)
chr7 (428-464)||(42252829-42252865)
[»] chr5 (24 HSPs)
chr5 (427-585)||(29984736-29984895)
chr5 (360-420)||(35683521-35683582)
chr5 (360-419)||(10843017-10843077)
chr5 (436-524)||(19778734-19778822)
chr5 (360-423)||(39649540-39649604)
chr5 (360-419)||(43496909-43496968)
chr5 (428-538)||(43379443-43379553)
chr5 (360-423)||(2679914-2679978)
chr5 (360-419)||(5772768-5772828)
chr5 (360-425)||(5836854-5836921)
chr5 (360-419)||(22103490-22103548)
chr5 (427-501)||(33529735-33529809)
chr5 (363-423)||(38568418-38568479)
chr5 (428-524)||(3635495-3635591)
chr5 (360-419)||(6491157-6491217)
chr5 (360-423)||(10955738-10955802)
chr5 (361-423)||(15974309-15974372)
chr5 (360-419)||(19389866-19389925)
chr5 (360-411)||(29022600-29022651)
chr5 (360-422)||(3925829-3925891)
chr5 (371-419)||(13569336-13569385)
chr5 (360-424)||(29709491-29709556)
chr5 (360-423)||(10437955-10438019)
chr5 (433-505)||(37839967-37840039)
[»] chr3 (36 HSPs)
chr3 (430-550)||(46461865-46461984)
chr3 (360-425)||(38639556-38639622)
chr3 (427-515)||(34936714-34936802)
chr3 (360-424)||(50948174-50948239)
chr3 (360-419)||(1339946-1340006)
chr3 (360-419)||(33944688-33944748)
chr3 (360-423)||(53664647-53664711)
chr3 (428-527)||(55444550-55444649)
chr3 (366-418)||(517685-517738)
chr3 (366-423)||(30995839-30995896)
chr3 (360-419)||(1132973-1133033)
chr3 (360-423)||(3537177-3537241)
chr3 (360-416)||(29623213-29623269)
chr3 (360-423)||(35283056-35283120)
chr3 (360-423)||(37674188-37674252)
chr3 (360-423)||(40118932-40118996)
chr3 (428-504)||(40613792-40613868)
chr3 (360-418)||(25754150-25754209)
chr3 (365-419)||(27197225-27197279)
chr3 (433-523)||(55439870-55439960)
chr3 (380-417)||(22225341-22225378)
chr3 (428-524)||(20918278-20918374)
chr3 (428-524)||(20927240-20927336)
chr3 (360-419)||(21777684-21777744)
chr3 (360-411)||(24588331-24588383)
chr3 (360-419)||(32858803-32858863)
chr3 (371-425)||(5939840-5939895)
chr3 (380-423)||(33909018-33909061)
chr3 (360-423)||(49183665-49183728)
chr3 (360-411)||(54089502-54089553)
chr3 (360-421)||(45570991-45571053)
chr3 (427-464)||(46462682-46462719)
chr3 (363-419)||(48908925-48908982)
chr3 (428-524)||(37886654-37886750)
chr3 (360-419)||(49855856-49855916)
chr3 (367-423)||(54917740-54917796)
[»] scaffold0031 (1 HSPs)
scaffold0031 (360-425)||(93554-93620)
[»] chr6 (15 HSPs)
chr6 (428-515)||(18065719-18065806)
chr6 (360-423)||(1567250-1567314)
chr6 (360-419)||(32719424-32719484)
chr6 (360-424)||(33590376-33590440)
chr6 (360-423)||(11180207-11180271)
chr6 (360-423)||(20820578-20820642)
chr6 (360-414)||(22788566-22788620)
chr6 (360-425)||(32221970-32222036)
chr6 (360-411)||(4089445-4089496)
chr6 (380-423)||(28551954-28551997)
chr6 (360-423)||(33212301-33212364)
chr6 (427-517)||(3163488-3163578)
chr6 (380-424)||(2502436-2502480)
chr6 (360-411)||(24379618-24379670)
chr6 (360-423)||(26713832-26713896)
[»] chr4 (30 HSPs)
chr4 (427-524)||(39310395-39310492)
chr4 (360-423)||(12708882-12708946)
chr4 (360-423)||(29114281-29114345)
chr4 (360-423)||(30198819-30198883)
chr4 (363-425)||(8828249-8828311)
chr4 (360-425)||(46176975-46177041)
chr4 (433-524)||(24484788-24484879)
chr4 (360-423)||(28175512-28175576)
chr4 (360-423)||(35959165-35959229)
chr4 (360-423)||(38136882-38136946)
chr4 (360-418)||(16318591-16318650)
chr4 (360-423)||(44076573-44076636)
chr4 (380-423)||(52636730-52636773)
chr4 (380-418)||(368043-368081)
chr4 (360-417)||(45823530-45823588)
chr4 (360-420)||(54205811-54205872)
chr4 (360-411)||(516045-516097)
chr4 (428-524)||(31414820-31414916)
chr4 (380-415)||(8827888-8827923)
chr4 (360-418)||(25843818-25843877)
chr4 (428-479)||(29079298-29079349)
chr4 (360-415)||(32866779-32866833)
chr4 (428-498)||(9483662-9483732)
chr4 (360-425)||(21081317-21081383)
chr4 (360-425)||(47063660-47063725)
chr4 (363-411)||(21443004-21443052)
chr4 (380-424)||(27143145-27143189)
chr4 (375-419)||(27485306-27485350)
chr4 (360-423)||(42650605-42650669)
chr4 (360-419)||(50494696-50494756)
[»] chr1 (31 HSPs)
chr1 (360-420)||(52068185-52068246)
chr1 (360-423)||(5584474-5584538)
chr1 (360-423)||(17760523-17760587)
chr1 (360-425)||(69701-69766)
chr1 (360-419)||(29092059-29092119)
chr1 (360-423)||(34154376-34154440)
chr1 (360-423)||(36269712-36269776)
chr1 (360-423)||(37649664-37649728)
chr1 (360-419)||(41817347-41817407)
chr1 (428-501)||(18526899-18526972)
chr1 (360-416)||(46001542-46001599)
chr1 (359-411)||(52073495-52073548)
chr1 (428-496)||(21071279-21071347)
chr1 (360-423)||(27255178-27255242)
chr1 (360-411)||(28848837-28848889)
chr1 (375-423)||(33324603-33324651)
chr1 (360-423)||(32672583-32672646)
chr1 (360-423)||(41432814-41432877)
chr1 (380-415)||(42333622-42333657)
chr1 (380-423)||(50587016-50587059)
chr1 (383-425)||(18909116-18909158)
chr1 (363-417)||(41428045-41428099)
chr1 (428-501)||(15668275-15668348)
chr1 (360-416)||(23412001-23412058)
chr1 (384-425)||(37955142-37955183)
chr1 (360-424)||(50226008-50226073)
chr1 (363-415)||(10449780-10449832)
chr1 (360-423)||(27102872-27102936)
chr1 (360-408)||(33579219-33579267)
chr1 (360-423)||(43036361-43036424)
chr1 (360-424)||(50097596-50097660)
[»] scaffold0136 (1 HSPs)
scaffold0136 (360-419)||(2071-2131)
[»] scaffold0128 (1 HSPs)
scaffold0128 (360-423)||(26348-26412)
[»] chr8 (25 HSPs)
chr8 (360-419)||(23932606-23932666)
chr8 (434-501)||(39309664-39309731)
chr8 (494-560)||(2581193-2581259)
chr8 (427-501)||(39308667-39308741)
chr8 (428-486)||(43235431-43235489)
chr8 (363-419)||(21173909-21173966)
chr8 (380-425)||(43007685-43007730)
chr8 (360-423)||(4166690-4166754)
chr8 (429-484)||(43235993-43236048)
chr8 (373-419)||(13227683-13227729)
chr8 (360-425)||(43438342-43438407)
chr8 (360-423)||(79661-79725)
chr8 (428-524)||(6461880-6461976)
chr8 (360-423)||(26772690-26772754)
chr8 (360-423)||(39193900-39193964)
chr8 (360-423)||(31149882-31149945)
chr8 (391-421)||(13258470-13258500)
chr8 (360-410)||(22330673-22330723)
chr8 (436-465)||(5940760-5940789)
chr8 (375-423)||(4873323-4873371)
chr8 (360-423)||(12506244-12506308)
chr8 (360-411)||(40985122-40985174)
chr8 (428-539)||(41889323-41889435)
chr8 (428-524)||(42578709-42578805)
chr8 (365-417)||(44251611-44251663)
[»] scaffold0051 (4 HSPs)
scaffold0051 (361-422)||(740-801)
scaffold0051 (361-422)||(3617-3678)
scaffold0051 (360-416)||(6805-6862)
scaffold0051 (360-416)||(7788-7845)
[»] scaffold0248 (1 HSPs)
scaffold0248 (360-419)||(244-304)
[»] scaffold0330 (2 HSPs)
scaffold0330 (433-524)||(13214-13305)
scaffold0330 (428-524)||(12517-12613)
[»] scaffold0053 (1 HSPs)
scaffold0053 (360-417)||(29219-29277)
[»] scaffold0263 (1 HSPs)
scaffold0263 (378-423)||(12316-12361)
[»] scaffold0002 (1 HSPs)
scaffold0002 (378-423)||(90942-90987)
[»] scaffold0151 (1 HSPs)
scaffold0151 (473-539)||(20785-20851)
[»] scaffold0388 (1 HSPs)
scaffold0388 (380-425)||(7037-7082)
[»] scaffold0274 (1 HSPs)
scaffold0274 (360-417)||(15893-15950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (360-419)||(82769-82829)
[»] scaffold0024 (1 HSPs)
scaffold0024 (380-408)||(44988-45016)


Alignment Details
Target: chr2 (Bit Score: 379; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 19 - 417
Target Start/End: Original strand, 41656350 - 41656748
Alignment:
Q  19 aaatgagacgtatcaattaattcctcaatacacagtctatacgcgctacatacagaatatttcccgttcctttccgctttccaaatgaccttatcctgct 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41656350 aaatgagacgtatcaattaattcctcaacacacagtctatacgcgctacatacagaatatttcccgttcctttccgctttccaaatgagcttatcctgct 41656449  T
Q  119 gtacctgaacaatcagaggcatatttaatatgacagcagcaatgtcatgactaaagatatgcctaatgagaggttcattccattttttctcattttcctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41656450 gtacctgaacaatcagaggcatatttaatatgacagcagcaatgtcatgactaaagatatgcctaatgagaggttcattccattttttctcattttcctc 41656549  T
Q  219 catcaaactgttgacagcaaaattctgaataagttgtgcgccttcaatatttccatcaatacgcctaccattcaaaagctaaggttcattaaggagtgaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41656550 catcaaactgttgacagcaaaattctgaataagttgtgcgccttcaatatttccatcaatacgcctaccattcaaaagctaaggttcattaaggagagaa 41656649  T
Q  319 atagaatcacctgtacccatactccatcttgcacccccacgtacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41656650 atagaatcacctgtaccaatactccatcttgcacccccacgtacaatttttgagttcccccaatgaggagagttttgtattatgaagaaaaattaaccc 41656748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 427 - 564
Target Start/End: Original strand, 6204506 - 6204643
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 526  Q
    |||| |||||||||||||||||| | ||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||||||  ||||||| |    
T  6204506 cgagagcatctttgctccatttaaggagcctccatttataccaattcacttcacagatgtttaacatgtggcaaatataaaatcaatggcagagattaaa 6204605  T
Q  527 aggcttagaaaaagcatttatttatcggaaaataaaca 564  Q
    ||| ||  ||||| ||||| ||||  ||||||||||||    
T  6204606 aggttttaaaaaatcatttgtttactggaaaataaaca 6204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 4003461 - 4003397
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  4003461 tacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 4003397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 1364866 - 1364802
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1364866 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 1364802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 11515077 - 11515013
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  11515077 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 11515013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 37194300 - 37194236
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  37194300 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 37194236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 15555394 - 15555454
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  15555394 tacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaattaaccccc 15555454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 34757638 - 34757574
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||  |||||||||||||    
T  34757638 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaggttaaccccccaaa 34757574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 39063805 - 39063901
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| |||||||||||||||||||   |||| |||||| |  ||||||||||| |||||  |||||||||||||| ||||| ||||||||| |||||    
T  39063805 gagtccatctttgctccatttaggtttcctcaatttattcattttcactttattgatgtatgacatgtggcaaatgtaaaaacaatggttgggatta 39063901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 43190587 - 43190651
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  43190587 tacaatttttgatttcctccaaatgatgagagttttgtattatgaagaaaagttaacccctcaaa 43190651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 43572592 - 43572652
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  43572592 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 43572652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 3737274 - 3737333
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||    
T  3737274 tacaatttttgagttcttcaaatgaggatgattttgtattatgaagaaaaattaaccccc 3737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 6656140 - 6656087
Alignment:
Q  371 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  6656140 agttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 6656087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 26905837 - 26905772
Alignment:
Q  360 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| ||||||||| ||||||||| ||||||||| |||||||||| |||||||| |||||    
T  26905837 tacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaacccctcaaaa 26905772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 13018526 - 13018590
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||| ||||| ||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||    
T  13018526 tacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaactccccaaa 13018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 524
Target Start/End: Complemental strand, 33361851 - 33361755
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  ||||||||||||| | ||| |||| || ||||||||    
T  33361851 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcattgatgtatgacatgtggcaaaaacaaacccaaaggatgagatta 33361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 36030846 - 36030786
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||||||||||| |||||||    
T  36030846 tacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaatgaaccccc 36030786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 501
Target Start/End: Complemental strand, 16871612 - 16871538
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||||  | |||||||   |||||||||||||    
T  16871612 cgagttcatctttgctccatttaggaagcttcaatttatcccatttcaactcatagatgactgacatgtggcaaa 16871538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 40212036 - 40211986
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaa 409  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  40212036 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 40211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 501
Target Start/End: Complemental strand, 20268101 - 20268028
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  |||||||||||||    
T  20268101 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcatcgatgtatgacatgtggcaaa 20268028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 20268122 - 20268195
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  |||||||||||||    
T  20268122 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcatcgatgtatgacatgtggcaaa 20268195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 5322167 - 5322227
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||| |||||||||||| |||| |||||||  ||||||||||||||||||||| |||||||    
T  5322167 tacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatgaaccccc 5322227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 21626156 - 21626092
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||| |||| ||||||  |||||||||||||||||||| |||||||||||||    
T  21626156 tacaactttttagttcccccaaatgaggatggttttgtattatgaagaaaagttaaccccccaaa 21626092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 26051696 - 26051756
Alignment:
Q  359 gtacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||| ||| |||||| ||| ||||||||||||||||   |||||||||||||||||    
T  26051696 gtacaatttgtgaattcctcaaataaggagagttttgtatttcaaagaaaaattaaccccc 26051756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 26599297 - 26599361
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||| |||||||| |||| ||||||| |  ||||||||||||||||||| |||||||||||    
T  26599297 tacaatttgtgagttcccccaaatgaggagggaattgtattatgaagaaaaatgaaccccccaaa 26599361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Complemental strand, 34229143 - 34229047
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| ||  |||| |||||  |||||| |  | ||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  34229143 gagtccatctttgctccatttaagattcctcaatttaccccattttaagtcatagatgtgtgacatgtggaaaaaataaaaccaatggctgagatta 34229047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 423
Target Start/End: Original strand, 35412278 - 35412310
Alignment:
Q  391 ttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||||||||||||||||||||||||||    
T  35412278 ttttgtattatgaagaaaaattaaccccccaaa 35412310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 467
Target Start/End: Original strand, 9375273 - 9375312
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttatac 467  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  9375273 gagtgcatctttgctccatttaggagggctccatttatac 9375312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 524
Target Start/End: Original strand, 10147799 - 10147882
Alignment:
Q  441 ctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||| ||||||||||||||||||| |||||||| |   | |||||  ||||||||||||| |||||| |||  ||||||||||    
T  10147799 ctccagttaggaagcctccatttatcccatttcattcgttggatgtgtgacatgtggcaaaaataaaatcaagcgttgagatta 10147882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 524
Target Start/End: Complemental strand, 10148669 - 10148586
Alignment:
Q  441 ctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||||||||||||||||||||||  |||||||| |   | |||||  ||||||||| ||| |||||| ||| |||||||||||    
T  10148669 ctccatttaggaagcctccatttaccccatttcattccttggatgtgtgacatgtggtaaaaataaaatcaagggttgagatta 10148586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 11949932 - 11949881
Alignment:
Q  366 ttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||| |||||    
T  11949932 tttttagttccccaaatgagaagagttttgtattatgaagaaaaataaaccc 11949881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 21834953 - 21834910
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||| ||||||||||||||||||| || |||||    
T  21834953 aatgaggagagttttatattatgaagaaaaattaatcctccaaa 21834910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 41100153 - 41100212
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatga-agaaaaattaacccc 418  Q
    |||||||||| |||||| | ||||||||| |||||||||||||| |||||| ||||||||    
T  41100153 tacaattttttagttccccaaatgaggagggttttgtattatgatagaaaagttaacccc 41100212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 39181099 - 39181045
Alignment:
Q  371 agttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||| ||||||||||||||| |||| ||||||||||| | || ||||||||    
T  39181099 agttcctcaaatgaggagagttttatattttgaagaaaaataagcctcccaaaac 39181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 16625860 - 16625893
Alignment:
Q  390 gttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||| ||||||||||||||||||||||||    
T  16625860 gttttgtatcatgaagaaaaattaaccccccaaa 16625893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 28539474 - 28539535
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacccccca 421  Q
    |||||||||| ||| || | |||||||||||||| | ||||||||||||| ||||| |||||    
T  28539474 tacaattttttagtcccccaaatgaggagagtttagcattatgaagaaaagttaactcccca 28539535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 39750185 - 39750124
Alignment:
Q  359 gtacaatttttgagttcctccaatgaggagagttttgtatta-tgaagaaaaattaaccccc 419  Q
    ||||||||||| |||||| | ||||||||| ||||||| ||| ||||||||| |||||||||    
T  39750185 gtacaattttttagttccccaaatgaggagggttttgtgttattgaagaaaagttaaccccc 39750124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 517
Target Start/End: Complemental strand, 41983334 - 41983245
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggtt 517  Q
    ||||||||||||||||||||||  ||| ||| |||||| || |||| ||| | ||||||  |||||||||| || |||||| ||| ||||    
T  41983334 gagtgcatctttgctccatttaccaaggctcaatttatcccttttcccttcacagatgtgtgacatgtggccaaaataaaatcaaaggtt 41983245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 4854473 - 4854569
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| |  | |||||||||  || ||||| | |||||||||  ||||| ||| ||| |||||  |||||||||||||||    
T  4854473 gagttcatctttgctccatttatgttgactccatttactccttttcaatgtatagatgtgtgacatatggtaaaaataaattcaatggttgagatta 4854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 16813667 - 16813611
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||| ||||  || ||| |||||||||| ||||||||||||||| ||||||    
T  16813667 tacaattttttagtttttcaaataaggagagtttagtattatgaagaaaagttaacc 16813611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 16852946 - 16852890
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||| ||||  || ||| |||||||||| ||||||||||||||| ||||||    
T  16852946 tacaattttttagtttttcaaataaggagagtttagtattatgaagaaaagttaacc 16852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 30523279 - 30523215
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| |||||| | ||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  30523279 tacaattttttagttccccaaattagaaggattttgtattatgaagaaaatttaacccaccaaaa 30523215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 34173896 - 34173832
Alignment:
Q  460 atttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||||| || ||||| ||||| |||||  |||||||| ||||| ||||| |||||||||||||||    
T  34173896 atttattccttttcattttattgatgtgtgacatgtgacaaatgtaaaaacaatggttgagatta 34173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 35550205 - 35550265
Alignment:
Q  359 gtacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||| |||| |||||| | ||||||||| |||| ||||||||||||| | |||||||||    
T  35550205 gtacaactttttagttccccaaatgaggagggtttagtattatgaagaacagttaaccccc 35550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 3e-77; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 428 - 590
Target Start/End: Original strand, 18947286 - 18947448
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18947286 gagtgcatctttgctccatttagggagcctccatttataccatttcacttcatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 18947385  T
Q  528 ggcttagaaaaagcatttatttatcggaaaataaacagacgcctctgctcttcctcctttgct 590  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  18947386 ggcttagaaaaagcatttatttaccggaaaataaacacacgcctctgctcttcctcctttgct 18947448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 428 - 550
Target Start/End: Complemental strand, 18948322 - 18948200
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 527  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||  ||||| |||||||| ||    
T  18948322 gagtgcatctttgctccatttagggagccttcatttataccatttcacttcatggatgtttgacatgtggcaaatataaaattaatggctgagattaaaa 18948223  T
Q  528 ggcttagaaaaagcatttattta 550  Q
    |||||||||||| ||||| ||||    
T  18948222 ggcttagaaaaaacatttcttta 18948200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 427 - 585
Target Start/End: Original strand, 43702721 - 43702880
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 526  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||| |||||||||  | |||||||||| ||||||  ||||  ||||| || |    
T  43702721 cgagtgcatctttgctccatttaaggagcctccatttatacaaattcacttcatagatgtttcatatgtggcaaaaataaaataaatgactgagagtaaa 43702820  T
Q  527 aggcttagaaaaagcatttatttatcggaaaataaacagac-gcctctgctcttcctcct 585  Q
    | | ||||||||| ||||  |||| || |||||||||| ||  |||||||||||||||||    
T  43702821 atgtttagaaaaaacattattttaccgaaaaataaacacacaccctctgctcttcctcct 43702880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 42113007 - 42113072
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||| |||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  42113007 tacaactttttagttccccaaatgaggagagtttagtattatgaagaaaaattaaccccccaaaac 42113072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 6746617 - 6746681
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  6746617 tacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaa 6746681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 15748997 - 15749061
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  15748997 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 15749061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 45940448 - 45940508
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  45940448 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 45940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 427 - 524
Target Start/End: Original strand, 41347090 - 41347187
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||| |||||||||| ||||||| |||||||||||||| ||  || | ||| |||||||  |||||||||||||||| ||| ||| || ||||||||    
T  41347090 cgagttcatctttgcttcatttagcaagcctccatttatccctgtttattttgtagatgtctgacatgtggcaaatattaaatcaagggctgagatta 41347187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 43741738 - 43741681
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 416  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  43741738 tacaatttttgagttctcccaaatgaggagagttttgtattatgaagaaaagttaacc 43741681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 4058187 - 4058251
Alignment:
Q  360 tacaatttttgagttcctccaat-gaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||| ||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  4058187 tacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaagttaaccccccaaa 4058251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 23466045 - 23466109
Alignment:
Q  360 tacaatttttgagttcc-tccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||| |||||||| || ||||||||| |||||||||||| ||||||||| |||||||||||    
T  23466045 tacaatttgtgagttccctcaaatgaggagggttttgtattataaagaaaaatgaaccccccaaa 23466109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 24924628 - 24924684
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||    
T  24924628 tacaattttcaagttcctcaaatgaggagggttttgtattatgaagaaaaatgaacc 24924684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 38505382 - 38505446
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||  |||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  38505382 tacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 38505446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 10592002 - 10592056
Alignment:
Q  363 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||||||| | |||||||| | ||||||||||||||||||| |||||||    
T  10592002 aatttttgagttccccaaatgaggatacttttgtattatgaagaaaagttaaccc 10592056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 17884242 - 17884300
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacccccc 420  Q
    |||||||||| |||||||| ||| || ||  ||||||||||||||||||||||||||||||    
T  17884242 tacaattttttagttcctcaaataagaag--ttttgtattatgaagaaaaattaacccccc 17884300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 16805615 - 16805679
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||| ||  |||||||||||||||||||| |||| ||||||||    
T  16805615 tacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaa 16805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Complemental strand, 25675815 - 25675719
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| |  | |||||||||  || ||||| | |||||||||  ||||||||| ||| |||||  |||||||||||||||    
T  25675815 gagttcatctttgctccatttatgttggctccatttactccttttcaatgtatagatgtgtgacatgtggtaaaaataaattcaatggttgagatta 25675719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 509
Target Start/End: Original strand, 16980477 - 16980552
Alignment:
Q  434 atctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaac 509  Q
    ||||||||||||||||| ||||||| |||||  || |||||||||| ||||||  ||||| || |||| |||||||    
T  16980477 atctttgctccatttagcaagcctcaatttactccttttcactttacagatgtgtgacatctgtcaaaaataaaac 16980552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 30301972 - 30302023
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||||| |||| ||| ||||||||||||||| |||| |||||||||||    
T  30301972 tacaattttttagtttctcaaatgaggagagttttatattttgaagaaaaat 30302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 42267055 - 42267110
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 415  Q
    |||||||||||| |||  | |||||  |||||||||||||||||||||||||||||    
T  42267055 tacaatttttgaattctccaaatgataagagttttgtattatgaagaaaaattaac 42267110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 42253988 - 42253942
Alignment:
Q  363 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaa 408  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  42253988 aattttttagttcctccaaatgaggagggttttgtattatgaagaaa 42253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 498
Target Start/End: Complemental strand, 46295716 - 46295646
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggc 498  Q
    ||||| ||||||||||||||||  ||  |||||||||| || ||||| |||||||||||  ||||||||||    
T  46295716 gagtgaatctttgctccatttatcaatgctccatttatcccttttcattttatagatgtgtgacatgtggc 46295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 13697315 - 13697262
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaatt 412  Q
    ||||| |||| |||||| |||| ||||||| |||||||||||||||||||||||    
T  13697315 tacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaatt 13697262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 44858149 - 44858198
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaa 409  Q
    |||||||||| |||||| ||||||||||| |||| || ||||||||||||    
T  44858149 tacaattttttagttcccccaatgaggagggtttagttttatgaagaaaa 44858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 19791723 - 19791667
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||| |||||| | ||||||| | |||| ||||||||||||||| ||||||    
T  19791723 tacaattttttagttccccaaatgaggtgggtttagtattatgaagaaaagttaacc 19791667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 33872159 - 33872219
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||| | |||||| |||| ||||||| |||| ||||||||||||||| |||||||||    
T  33872159 tacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccccc 33872219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 38233784 - 38233840
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    ||||| |||| |||||||| |||||| || |||||||| ||| ||||||||||||||    
T  38233784 tacaactttttagttcctcaaatgagaagggttttgtaatatcaagaaaaattaacc 38233840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 464
Target Start/End: Original strand, 42252829 - 42252865
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccattta 464  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  42252829 gagttcatctttgctccatttatgaagcctccattta 42252865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 427 - 585
Target Start/End: Complemental strand, 29984895 - 29984736
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 526  Q
    |||||||||||||||| | |||||  ||||||||||||||||| ||||||| || |||||| ||||||||  ||||| ||||||||||| |||||||| |    
T  29984895 cgagtgcatctttgcttcctttagagagcctccatttataccaattcacttcatggatgtttgacatgtgaaaaataaaaaaccaatggctgagattaaa 29984796  T
Q  527 aggcttagaaaaagc-atttatttatcggaaaataaacagacgcctctgctcttcctcct 585  Q
    |||||| ||||||   | || ||||| |||||||||||| ||||||||||||||||||||    
T  29984795 aggcttcgaaaaaaatacttgtttattggaaaataaacacacgcctctgctcttcctcct 29984736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 35683521 - 35683582
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 420  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  35683521 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccc 35683582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 10843077 - 10843017
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  10843077 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 10843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 524
Target Start/End: Complemental strand, 19778822 - 19778734
Alignment:
Q  436 ctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||| ||||||||| ||||| || ||| ||||||| |||||| |||||||||||||| |||||  || |||||||||||    
T  19778822 ctttcctccatttaagaagcctccgtttattcctttttactttattgatgtttgacatgtggcaaatgtaaaaataagggttgagatta 19778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 39649604 - 39649540
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||    
T  39649604 tacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaa 39649540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 43496909 - 43496968
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| |||||| | |||||| ||||||||||||||| |||||||||||||||||    
T  43496909 tacaatttttaagttccccaaatgagcagagttttgtattattaagaaaaattaaccccc 43496968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 428 - 538
Target Start/End: Complemental strand, 43379553 - 43379443
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 527  Q
    |||| ||||||||||||||||| |||| |||||||||| ||||| ||  |  |||||||  ||||||||||||| |||||| ||| ||||| ||||| ||    
T  43379553 gagttcatctttgctccatttatgaaggctccatttatcccattccagctcttagatgtgtgacatgtggcaaaaataaaagcaagggttgggattaaaa 43379454  T
Q  528 ggcttagaaaa 538  Q
    || || |||||    
T  43379453 ggtttggaaaa 43379443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 2679914 - 2679978
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||||||| ||| ||| ||| |||||||||||||||| ||||||| |||||||||||||    
T  2679914 tacaatttttgagtcccttcaaatgatgagagttttgtattataaagaaaagttaaccccccaaa 2679978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 5772768 - 5772828
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| | ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  5772768 tacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 5772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 5836921 - 5836854
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaac-cccccaaaac 425  Q
    |||||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||| ||||||||||    
T  5836921 tacaatttttaagttcccccaaatgagaagagttttgtattatgaagaaaaatgaactcccccaaaac 5836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 22103548 - 22103490
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| |||||| | ||||| ||| ||||||||||||||||||||||||||||||    
T  22103548 tacaattttt-agttccccgaatgatgagggttttgtattatgaagaaaaattaaccccc 22103490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 501
Target Start/End: Original strand, 33529735 - 33529809
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||||  | |||||||   |||||||||||||    
T  33529735 cgagttcatctttgctccatttaggaagcttcaatttatcccatttcaactcatagatgactgacatgtggcaaa 33529809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 38568418 - 38568479
Alignment:
Q  363 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||| |||||| |||| ||||||| |||| ||||||||||||||| |||||||||||||    
T  38568418 aattttttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccccccaaa 38568479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 3635495 - 3635591
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| |||| || ||||| | || |||||  | |||||||   |||||||||||||| |||||| || |||||||||||    
T  3635495 gagtccatctttgctccatttaagaagacttcatttttcccttttcatctcatagatgactgacatgtggcaaatttaaaacgaaaggttgagatta 3635591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 6491217 - 6491157
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||||||||| |||| ||||||   ||||||||||||||||||||| |||||||    
T  6491217 tacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaatgaaccccc 6491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 10955738 - 10955802
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||| ||| |||||| |||| ||||||| |||||||||||||| ||||| |||||||||||||    
T  10955738 tacaatcttttagttcccccaaatgaggagggttttgtattatgatgaaaagttaaccccccaaa 10955802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 15974372 - 15974309
Alignment:
Q  361 acaatttttgagttc-ctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||| ||||| ||| |||||||||||| | ||||||||||||||| ||||||| |||||    
T  15974372 acaattttttagttctctcaaatgaggagagtatagtattatgaagaaaagttaaccctccaaa 15974309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 19389866 - 19389925
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| |||||| | |||||||||  |||||||||||||||| |||| |||||||    
T  19389866 tacaattttttagttccccaaatgaggaggattttgtattatgaagataaatgaaccccc 19389925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 29022651 - 29022600
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||||| |||||||  ||||||||||||||| |||| |||||||||||    
T  29022651 tacaattttttagttccttaaatgaggagagttttatattttgaagaaaaat 29022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 3925829 - 3925891
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 422  Q
    |||||||||| |||||| | |||||||||| || | ||| ||||||||||||||| |||||||    
T  3925829 tacaattttttagttccccaaatgaggagaattctatatcatgaagaaaaattaatcccccaa 3925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 13569385 - 13569336
Alignment:
Q  371 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  13569385 agttcctccaaatgaggaaaattttgtattatgaagaaaagttaaccccc 13569336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 29709556 - 29709491
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| ||||||| ||| |||||||| |||||||||||| |||||| | |||||| |||||    
T  29709556 tacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaacccctcaaaa 29709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 10438019 - 10437955
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||||| || |||||||  ||||||||||| ||||||| |||||||||||||    
T  10438019 tacaactttttagttcctctaaatgaggaggattttgtattataaagaaaagttaaccccccaaa 10437955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 37839967 - 37840039
Alignment:
Q  433 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatata 505  Q
    ||||||||||||||||| |||  || ||||||| || ||||||||||| || ||  |||||||||||| ||||    
T  37839967 catctttgctccatttaagaacgcttcatttatcccttttcactttattgacgtgtgacatgtggcaagtata 37840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 430 - 550
Target Start/End: Original strand, 46461865 - 46461984
Alignment:
Q  430 gtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaagg 529  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| || || |||||| |||||||||||||||||||| |||||| |||||||| || |    
T  46461865 gtgcatctttgctccattaagagagcctccatttataccatttcatttcatggatgtttgacatgtggcaaatataaaatcaatggctgagatta-aaag 46461963  T
Q  530 cttagaaaaagcatttattta 550  Q
     ||||||||||||||| ||||    
T  46461964 tttagaaaaagcatttgttta 46461984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 38639622 - 38639556
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  38639622 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaaac 38639556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 34936714 - 34936802
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatgg 515  Q
    |||||||||||||||||||||||  |  ||||||||||| || |||||||| |||||| |  ||||||||||||| |||||||||||||    
T  34936714 cgagtgcatctttgctccatttaccatacctccatttatcccttttcacttcatagatttgtgacatgtggcaaaaataaaaccaatgg 34936802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 50948239 - 50948174
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||    
T  50948239 tacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaa 50948174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 1339946 - 1340006
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||    
T  1339946 tacaatttttgagttccttcaaatgatgagagttatgtattatgaagaaaaattaaccccc 1340006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 33944688 - 33944748
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  33944688 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 33944748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 53664647 - 53664711
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||    
T  53664647 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccctcaaa 53664711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 527
Target Start/End: Complemental strand, 55444649 - 55444550
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 527  Q
    |||| |||||||||| |||||| |||  |||||||||| || ||||||||||| |||||  |||||||||||||| ||||| ||| || || ||||||||    
T  55444649 gagtccatctttgcttcatttaagaatgctccatttatcccttttcactttattgatgtgtgacatgtggcaaatgtaaaaacaagggctgggattagaa 55444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 517685 - 517738
Alignment:
Q  366 ttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 418  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  517685 ttttgagttcccccaaatgaggagggttttgtattatgaagaaaaattaacccc 517738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 30995896 - 30995839
Alignment:
Q  366 ttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||| |||||| | |||||| |||||||||||||||||||||||||||||| ||||||    
T  30995896 tttttagttccccaaatgagtagagttttgtattatgaagaaaaattaacctcccaaa 30995839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 1132973 - 1133033
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| ||||| |||||||    
T  1132973 tacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaatgaaccccc 1133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 3537241 - 3537177
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  3537241 tacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaacctcccaaa 3537177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 29623269 - 29623213
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 416  Q
    ||||| ||||||||| | | ||||||||| |||||||||||||||||||||||||||    
T  29623269 tacaacttttgagtttcccaaatgaggagggttttgtattatgaagaaaaattaacc 29623213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 35283120 - 35283056
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| ||||| |||| |||||||||||||||||||||||    
T  35283120 tacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaa 35283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 37674188 - 37674252
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||||| || ||||||| ||||||||| |||||||||| |||||||||||||    
T  37674188 tacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaa 37674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 40118932 - 40118996
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| ||||||| | ||||||||||||||||||||||||    
T  40118932 tacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaa 40118996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 40613868 - 40613792
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatat 504  Q
    |||| |||||||||||||||||| |||||||||||||| ||  |||| ||| |||||||  ||||||||||| ||||    
T  40613868 gagttcatctttgctccatttagcaagcctccatttatccctgttcattttgtagatgtctgacatgtggcacatat 40613792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 25754150 - 25754209
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 418  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  25754150 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtcaacccc 25754209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 27197279 - 27197225
Alignment:
Q  365 tttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||| |||||||| ||||||||| |||||||||||||||||| | |||||||||    
T  27197279 ttttttagttcctcaaatgaggagggttttgtattatgaagaatagttaaccccc 27197225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 523
Target Start/End: Original strand, 55439870 - 55439960
Alignment:
Q  433 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatt 523  Q
    ||||||||||||||||| |||  || ||||||| || ||||||||||| |||||  ||||| |||||| |||| || ||| ||||||||||    
T  55439870 catctttgctccatttaagaatgcttcatttatcccttttcactttattgatgtgtgacatatggcaagtatacaatcaagggttgagatt 55439960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 22225378 - 22225341
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22225378 aatgaggagagtttagtattatgaagaaaaattaaccc 22225341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 20918278 - 20918374
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||| || |||||| |||| |||||||| | || |||||| | |||||||   |||||||||||||| |||||| || |||||||||||    
T  20918278 gagtccatctttacttcatttaagaaggctccatttttcccttttcacctcatagatgactgacatgtggcaaatttaaaacgaagggttgagatta 20918374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 20927240 - 20927336
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||| || |||||| |||| |||||||| | || |||||| | |||||||   |||||||||||||| |||||| || |||||||||||    
T  20927240 gagtccatctttacttcatttaagaaggctccatttttcccttttcacctcatagatgactgacatgtggcaaatttaaaacgaagggttgagatta 20927336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 21777684 - 21777744
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||||| |||  |||| ||| |||||||||||||||||||||||||| |||||||    
T  21777684 tacaatttttgatttctcccaaatgatgagagttttgtattatgaagaaaaatgaaccccc 21777744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 24588331 - 24588383
Alignment:
Q  360 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||||||||||    
T  24588331 tacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaaat 24588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 32858863 - 32858803
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||||||||| |||| |||||||  |||| |||||||||||||||| |||||||    
T  32858863 tacaatttttgagttcccccaaatgaggaggattttatattatgaagaaaaatgaaccccc 32858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 5939840 - 5939895
Alignment:
Q  371 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||||||||| ||||||   ||||||||||||||||||| |||||||||||||||    
T  5939840 agttcctccaaatgaggaagattttgtattatgaagaaaagttaaccccccaaaac 5939895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 33909018 - 33909061
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||    
T  33909018 aatgaggagggttttgtattatgaagaaaagttaatcccccaaa 33909061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 49183728 - 49183665
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||  | ||||||||| | || ||||||||||||||| |||||||||||||    
T  49183728 tacaattttttagttctccaaatgaggagggattagtattatgaagaaaagttaaccccccaaa 49183665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 54089502 - 54089553
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||||| |||| ||| |||||| ||||||||||||||| |||||||||    
T  54089502 tacaattttttagtttctcaaatgagaagagttttgtattataaagaaaaat 54089553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 45570991 - 45571053
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccca 421  Q
    |||||||||| |||||| |||| ||||||| ||||  |||||||||||||||| |||||||||    
T  45570991 tacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaatgaacccccca 45571053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 464
Target Start/End: Complemental strand, 46462719 - 46462682
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccattta 464  Q
    |||||||||||||||||||||||| || ||||||||||    
T  46462719 cgagtgcatctttgctccatttagcaaccctccattta 46462682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 48908925 - 48908982
Alignment:
Q  363 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||| ||||||||||| | | ||| |||||||||||||||||||| |||||||||    
T  48908925 aattttttagttcctccaaattatgagggttttgtattatgaagaaaagttaaccccc 48908982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 37886654 - 37886750
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||| |||||| ||||||||   |||| |||||| || ||||||||||| |||||  |||||||||||||| ||||  ||| ||||| |||||    
T  37886654 gagtccatttttgcttcatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaatgtaaagtcaagggttgggatta 37886750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 49855856 - 49855916
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||||||||||||| || |||| |   ||||||||||||||||||||| |||||||    
T  49855856 tacaatttttgagttcctctaaatgagaattattttgtattatgaagaaaaatgaaccccc 49855916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 54917796 - 54917740
Alignment:
Q  367 tttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| | ||| |||||  |||||||||| |||||||||| |||||||||||    
T  54917796 tttgagttccccaaattaggaggattttgtattacgaagaaaaataaaccccccaaa 54917740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 93554 - 93620
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  93554 tacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaaccccccaaaac 93620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 428 - 515
Target Start/End: Original strand, 18065719 - 18065806
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatgg 515  Q
    ||||||||||||||||||||||  || ||||||||||| || ||| ||||||||||| |  ||||||||||||| |||||||||||||    
T  18065719 gagtgcatctttgctccatttaccaaacctccatttatccctttttactttatagatatatgacatgtggcaaaaataaaaccaatgg 18065806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 1567314 - 1567250
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1567314 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 1567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 32719424 - 32719484
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  32719424 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 32719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 33590376 - 33590440
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||||||| ||||||||||||||    
T  33590376 tacaattttttagctccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaaa 33590440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 11180207 - 11180271
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||| || ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||    
T  11180207 tacaattctttagttcctccaaatgaggagggttttgtattatggagaaaagttaaccccccaaa 11180271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 20820578 - 20820642
Alignment:
Q  360 tacaatttttgagttcctccaat-gaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| ||||  ||||||||||| ||||||||||||||| |||||||||||||    
T  20820578 tacaattttttagttcccccaaacgaggagagtttagtattatgaagaaaagttaaccccccaaa 20820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 22788566 - 22788620
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaa 414  Q
    |||||||||| |||||||| |||||| ||||||||||||||| ||||||| ||||    
T  22788566 tacaattttttagttcctcaaatgagaagagttttgtattatcaagaaaagttaa 22788620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 32222036 - 32221970
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| ||||||||||| ||||||||||||  |||||| ||||||| |||||||| ||||||    
T  32222036 tacaattttttagttcctccaaatgaggagagtttgatattataaagaaaagttaacccctcaaaac 32221970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 4089445 - 4089496
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||| | |||||||| ||||||||||||||| |||| |||||||||||    
T  4089445 tacaatttcttagttcctcaaatgaggagagttttatattttgaagaaaaat 4089496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 28551954 - 28551997
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  28551954 aatgaggagagttttgtattatgaagaaaagctaacccctcaaa 28551997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 33212364 - 33212301
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||| | |||||| ||||| |||||||||||||| ||||||||||| ||||    
T  33212364 tacaactttttagttccccaaatgagcagagtgttgtattatgaagacaaattaacccctcaaa 33212301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 517
Target Start/End: Original strand, 3163488 - 3163578
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggtt 517  Q
    |||||||| |||  ||||||||||  | ||||||||||  || ||||| |||||||||||  |||||||| |||| |||||||||| ||||    
T  3163488 cgagtgcaacttcactccatttagctatcctccatttaccccttttcagtttatagatgtgcgacatgtgtcaaaaataaaaccaagggtt 3163578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 2502436 - 2502480
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  2502436 aatgaagagagttttatattataaagaaaaataaaccccccaaaa 2502480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 24379670 - 24379618
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 411  Q
    ||||||||||||||| ||| || ||||||| |||||||||| |||||||||||    
T  24379670 tacaatttttgagtttctctaaatgaggagggttttgtattttgaagaaaaat 24379618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 26713896 - 26713832
Alignment:
Q  360 tacaatttttgagttcctccaatgagga-gagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||||| | |||||||| || |||  ||| ||||||||||||||||||| ||||    
T  26713896 tacaatttttgagttccccaaatgaggaggattttcttatcatgaagaaaaattaacccctcaaa 26713832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 427 - 524
Target Start/End: Original strand, 39310395 - 39310492
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||| ||||||||||||||||| ||  |||| |||||| ||||||||  ||||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  39310395 cgagtccatctttgctccatttaagattcctcaatttatcccatttcaagttatagatgtatgacatgtggaaaaaataaaaccaatggctgagatta 39310492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 12708882 - 12708946
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  12708882 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 12708946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 29114281 - 29114345
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  29114281 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 29114345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 30198819 - 30198883
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  30198819 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 30198883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 425
Target Start/End: Original strand, 8828249 - 8828311
Alignment:
Q  363 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||    
T  8828249 aatttttcagttcctcaaatgaggagagttttgtattatgaagaaaattaaactccccaaaac 8828311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 46176975 - 46177041
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  46176975 tacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaac 46177041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 524
Target Start/End: Original strand, 24484788 - 24484879
Alignment:
Q  433 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    ||||||||||||||||| ||  |||| |||||| | ||||||  ||||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  24484788 catctttgctccatttaagattcctcaatttatcctatttcaagttatagatgtgtgacatgtggaaaaaataaaaccaatggctgagatta 24484879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 28175512 - 28175576
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| |||||||  ||||||||||||||||||| |||||| ||||||    
T  28175512 tacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaagttaacctcccaaa 28175576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 35959229 - 35959165
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  35959229 tacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaa 35959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 38136882 - 38136946
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||| |||| |||||||||||||    
T  38136882 tacaattttttagttcctccaaatgagaagggttttgtattatgaaaaaaagttaaccccccaaa 38136946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 16318650 - 16318591
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 418  Q
    |||||||||| ||||||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  16318650 tacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaagttaacccc 16318591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 44076636 - 44076573
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||   | |||| |||||||||||||||||||||||||||| ||||||||    
T  44076636 tacaattttttagttccctaagtgagaagagttttgtattatgaagaaaaattaatcccccaaa 44076573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 52636773 - 52636730
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  52636773 aatgaggagggttttatattatgaagaaaaattaaccccccaaa 52636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 368081 - 368043
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaacccc 418  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  368081 aatgaggagggttttgtattatgaagaaaaattaacccc 368043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 45823588 - 45823530
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||||||| |||||||    
T  45823588 tacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaagttaaccc 45823530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 54205872 - 54205811
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 420  Q
    ||||||||||||||||| |||| |||||||  |||||| |||||||||||||| ||||||||    
T  54205872 tacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaatgaacccccc 54205811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 516097 - 516045
Alignment:
Q  360 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaat 411  Q
    ||||||||||||||| |||  |||||||||| |||||||||||||||||||||    
T  516097 tacaatttttgagtttctctgaatgaggagaattttgtattatgaagaaaaat 516045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Complemental strand, 31414916 - 31414820
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| |   |||| |||||| || ||||||||||| ||| |  |||||||||||||| |||||  || |||||||||||    
T  31414916 gagtccatctttgctccatttaagtttcctcaatttattccttttcactttattgatatgtgacatgtggcaaatgtaaaaagaagggttgagatta 31414820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 415
Target Start/End: Original strand, 8827888 - 8827923
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaac 415  Q
    |||||||||||||||||||||||||||| |||||||    
T  8827888 aatgaggagagttttgtattatgaagaataattaac 8827923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 25843877 - 25843818
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 418  Q
    |||| |||||||||| | |||| |||| ||||||||||||||||| ||||||||||||||    
T  25843877 tacactttttgagtttccccaaatgagaagagttttgtattatgatgaaaaattaacccc 25843818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Complemental strand, 29079349 - 29079298
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcacttta 479  Q
    ||||||||||||||||||||||| ||||||| |||||  || ||||||||||    
T  29079349 gagtgcatctttgctccatttagcaagcctcaatttactccttttcacttta 29079298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 32866779 - 32866833
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 415  Q
    |||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||    
T  32866779 tacaattttttagttcc-caaatgaggagaactttgtattatgaagaaaaattaac 32866833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 498
Target Start/End: Complemental strand, 9483732 - 9483662
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggc 498  Q
    |||||||||||||||||||||   |||  ||||||||| || |||||||| ||||||||  ||||||||||    
T  9483732 gagtgcatctttgctccatttgcaaaggttccatttatcccttttcacttcatagatgtgtgacatgtggc 9483662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 21081383 - 21081317
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| |||| | |||| ||||||| ||||||| |||||||||||||| ||||| |||||||    
T  21081383 tacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaac 21081317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 47063725 - 47063660
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| |||||| | ||||||||| ||||| |||| | ||||||||| | |||||||||||    
T  47063725 tacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataagccccccaaaac 47063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 21443052 - 21443004
Alignment:
Q  363 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 411  Q
    ||||||| |||||||| ||||||||| ||||| |||| |||||||||||    
T  21443052 aattttttagttcctcaaatgaggagggttttatattttgaagaaaaat 21443004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 27143189 - 27143145
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  27143189 aatgaagagagttttatattataaagaaaaataaaccccccaaaa 27143145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 27485306 - 27485350
Alignment:
Q  375 cctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||| |||||||||  ||||||||||||||||||||| |||||||    
T  27485306 cctcaaatgaggaggattttgtattatgaagaaaaatgaaccccc 27485350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 42650669 - 42650605
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| ||||| |||| ||||||||||| || ||||||||    
T  42650669 tacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataaaacccccaaa 42650605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 50494696 - 50494756
Alignment:
Q  360 tacaatttttgagtt-cctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| |||| |||  ||||||||| ||||||| |||||||||||| |||||||||    
T  50494696 tacaattttttagtttccttgaatgaggagggttttgtgttatgaagaaaacttaaccccc 50494756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 52068185 - 52068246
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 420  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52068185 tacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaacccccc 52068246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 5584538 - 5584474
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  5584538 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 5584474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 17760523 - 17760587
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  17760523 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 17760587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 69766 - 69701
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||| |||||||| || |||||| |||| ||||||||||||||| |||||||||||||||    
T  69766 tacaattttttagttcctcaaacgaggagggtttagtattatgaagaaaagttaaccccccaaaac 69701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 29092119 - 29092059
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  29092119 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 29092059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 34154376 - 34154440
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||||| |||||||||||||    
T  34154376 tacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaagttaaccccccaaa 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 36269776 - 36269712
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  36269776 tacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 36269712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 37649664 - 37649728
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||| ||||||| ||||| |||||||    
T  37649664 tacaattttttagttcctccaaatgaggagggttttgtattataaagaaaagttaacaccccaaa 37649728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 41817347 - 41817407
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  41817347 tacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaaccccc 41817407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 501
Target Start/End: Complemental strand, 18526972 - 18526899
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    |||| ||| ||||||||||||||||||||| ||||||| || |||||| | |||||||   |||||||||||||    
T  18526972 gagtccatatttgctccatttaggaagccttcatttatcccttttcacctcatagatgactgacatgtggcaaa 18526899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 46001599 - 46001542
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||| ||||||||||| ||||||| ||||| |||||||||||||| ||||||    
T  46001599 tacaattttttagttcctccaaatgaggagggttttatattatgaagaaaagttaacc 46001542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 52073495 - 52073548
Alignment:
Q  359 gtacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 411  Q
    |||||||||||||||||| |||| ||||||| |||||| |||||||||||||||    
T  52073495 gtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaat 52073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 496
Target Start/End: Complemental strand, 21071347 - 21071279
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtg 496  Q
    ||||||||||| ||||||||||| ||  |||||||||| || ||||| |||||||||||  ||||||||    
T  21071347 gagtgcatcttcgctccatttagcaattctccatttatcccttttcattttatagatgtgcgacatgtg 21071279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 27255242 - 27255178
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||| ||||| ||||||| ||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  27255242 tacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaagttaacctcccaaa 27255178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 28848837 - 28848889
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 411  Q
    ||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  28848837 tacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaaat 28848889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 33324651 - 33324603
Alignment:
Q  375 cctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||| ||||||||| |||| ||||||||||||||| |||||||||||||    
T  33324651 cctcaaatgaggagggtttagtattatgaagaaaagttaaccccccaaa 33324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 32672646 - 32672583
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||| ||| || |||||| |||| |||| |||||||||| |||||||||||||    
T  32672646 tacaattttttagtttctcaaacgaggagggtttagtatgatgaagaaaagttaaccccccaaa 32672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 41432814 - 41432877
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||||||| || | ||||||||| ||||| |||||||||||||||| || ||||||||    
T  41432814 tacaaattttgagtcccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaa 41432877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 415
Target Start/End: Complemental strand, 42333657 - 42333622
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaac 415  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42333657 aatgaggagggttttgtattatgaagaaaaattaac 42333622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 50587059 - 50587016
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||  ||||||||||||||||||||| |||||||||||    
T  50587059 aatgaggaggattttgtattatgaagaaaaatgaaccccccaaa 50587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 425
Target Start/End: Original strand, 18909116 - 18909158
Alignment:
Q  383 gaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  18909116 gaggagagttttgtattatgaaaaaaaattaaccttccaaaac 18909158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 41428045 - 41428099
Alignment:
Q  363 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||||||| | |||||||||| | ||  |||||||||||||||||||||    
T  41428045 aatttttgagttccccaaatgaggagattctttcattatgaagaaaaattaaccc 41428099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 501
Target Start/End: Complemental strand, 15668348 - 15668275
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    |||| ||||||||||||||||| |||| |||||||||  || ||||||| | | |||||  |||||||||||||    
T  15668348 gagtccatctttgctccatttaagaaggctccatttactccttttcactgtttggatgtgtgacatgtggcaaa 15668275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 23412001 - 23412058
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||||||| ||||||||||| |||||||  ||||| ||||||||||||||| ||||    
T  23412001 tacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaaatgaacc 23412058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 37955183 - 37955142
Alignment:
Q  384 aggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||| ||||||||||||||||||||||||| | |||||||    
T  37955183 aggagaattttgtattatgaagaaaaattaacactccaaaac 37955142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 50226073 - 50226008
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    |||||||||| ||||| ||||| |||| || ||||  |||||||||||||| ||||||||||||||    
T  50226073 tacaattttttagttcttccaaatgagaagggtttaatattatgaagaaaagttaaccccccaaaa 50226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 10449832 - 10449780
Alignment:
Q  363 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 415  Q
    ||||||||||||   | ||||| |||||||||||||||||||||||| |||||    
T  10449832 aatttttgagttttccaaatgaagagagttttgtattatgaagaaaagttaac 10449780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 27102872 - 27102936
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||||||| | |||| ||| |||  ||||||||||||||||||||| |||| ||||||    
T  27102872 tacaatttttgagtttccccaaatgaagagcattttgtattatgaagaaaaatgaacctcccaaa 27102936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 33579267 - 33579219
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaa 408  Q
    ||||| ||||||||||| | ||||||||| |||||||||||| ||||||    
T  33579267 tacaacttttgagttccccaaatgaggagggttttgtattataaagaaa 33579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 43036361 - 43036424
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||  |||| ||||||| ||||| |||| |||||||||||||||||||||||    
T  43036361 tacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaaa 43036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 50097660 - 50097596
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 424  Q
    ||||| |||| |||||||| ||| ||||  ||||| |||| ||||||||||| ||||||||||||    
T  50097660 tacaactttttagttcctcaaataaggatggttttatattttgaagaaaaataaaccccccaaaa 50097596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 2071 - 2131
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  2071 tacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 26412 - 26348
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  26412 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttatccccccaaa 26348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 23932606 - 23932666
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  23932606 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 23932666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 501
Target Start/End: Complemental strand, 39309731 - 39309664
Alignment:
Q  434 atctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    |||||||||||||||||||| ||||||||||| || |||||| | ||||||| | |||||||||||||    
T  39309731 atctttgctccatttaggaaacctccatttatcccttttcacctcatagatgattgacatgtggcaaa 39309664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 560
Target Start/End: Original strand, 2581193 - 2581259
Alignment:
Q  494 gtggcaaatataaaaccaatggttgagattagaaggcttagaaaaagcatttatttatcggaaaata 560  Q
    ||||||||||| ||||||||||||||||||| || ||||| ||||||||||| ||||  ||||||||    
T  2581193 gtggcaaatatgaaaccaatggttgagattaaaaagcttaaaaaaagcatttgtttactggaaaata 2581259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 427 - 501
Target Start/End: Original strand, 39308667 - 39308741
Alignment:
Q  427 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 501  Q
    ||||| ||||||||||||||||||||| ||||||||||| || |||||| | |||||||   |||||||||||||    
T  39308667 cgagtccatctttgctccatttaggaaacctccatttatcccttttcacctcatagatgactgacatgtggcaaa 39308741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 43235431 - 43235489
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgt 486  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||| ||||||||    
T  43235431 gagtgcatctttgctccatttaccaagcctccatttatcccttttcacttcatagatgt 43235489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 21173909 - 21173966
Alignment:
Q  363 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  21173909 aattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 21173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 43007730 - 43007685
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  43007730 aatgaggagagttttgtattataaagaaaagttaaccccccaaaac 43007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 4166690 - 4166754
Alignment:
Q  360 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| ||||||| | |||||| |||||||||||||||||||||||||| ||||||||||    
T  4166690 tacaactttttagttccttcgaatgagaagagttttgtattatgaagaaaaatttaccccccaaa 4166754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 484
Target Start/End: Complemental strand, 43236048 - 43235993
Alignment:
Q  429 agtgcatctttgctccatttaggaagcctccatttataccatttcactttatagat 484  Q
    |||||||||||||||||||||  ||||||||||||||  | |||||||||||||||    
T  43236048 agtgcatctttgctccatttaccaagcctccatttatctcttttcactttatagat 43235993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 13227729 - 13227683
Alignment:
Q  373 ttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||    
T  13227729 ttcctcaaatgaggagagttttgtataatgaagaaaagttaaccccc 13227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 43438342 - 43438407
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||||||||||||||||| |||| | ||| ||||||||||| ||||||||| |||| || |||||    
T  43438342 tacaatttttgagttcctcaaatgggaagaattttgtattataaagaaaaatgaacctccaaaaac 43438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 79661 - 79725
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| |||| |||||||||||||||  ||||||||||||    
T  79661 tacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaa 79725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 6461880 - 6461976
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| |||||||||||||||| ||    ||| ||||||  |||||||  ||||||||||  ||||||||||||| |||||| ||||||||| |||||    
T  6461880 gagttcatctttgctccatttcggtttgctcaatttatttcatttcaagttatagatgtatgacatgtggcaaaaataaaatcaatggttgtgatta 6461976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 26772690 - 26772754
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| ||||||| ||| ||| ||| |||||||||||||||||||| |||||| ||||||    
T  26772690 tacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaagttaacctcccaaa 26772754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 39193964 - 39193900
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||| |||| ||| ||| ||||| ||||||||||||||||||||||||||||    
T  39193964 tacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaattaaccccccaaa 39193900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 31149945 - 31149882
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||| |||| |||||| | ||||||||   |||||||||| ||||||||||||||||||||||    
T  31149945 tacaactttttagttccccaaatgaggatgattttgtattaggaagaaaaattaaccccccaaa 31149882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 421
Target Start/End: Complemental strand, 13258500 - 13258470
Alignment:
Q  391 ttttgtattatgaagaaaaattaacccccca 421  Q
    |||||||||||||||||||||||||||||||    
T  13258500 ttttgtattatgaagaaaaattaacccccca 13258470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 22330723 - 22330673
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaa 410  Q
    |||||||||| |||||||  || ||||||| ||||||||||||||||||||    
T  22330723 tacaattttttagttcctaaaaagaggagaattttgtattatgaagaaaaa 22330673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 465
Target Start/End: Complemental strand, 5940789 - 5940760
Alignment:
Q  436 ctttgctccatttaggaagcctccatttat 465  Q
    ||||||||||||||||||||||||||||||    
T  5940789 ctttgctccatttaggaagcctccatttat 5940760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 4873323 - 4873371
Alignment:
Q  375 cctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||| ||||||||| ||||  |||||||||||||| |||||||||||||    
T  4873323 cctcaaatgaggagggtttcatattatgaagaaaagttaaccccccaaa 4873371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 12506244 - 12506308
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    |||||||||| |||||| |||| ||||||| ||||  |||| ||||||||| |||||||||||||    
T  12506244 tacaattttttagttcccccaaatgaggagggtttaatattttgaagaaaagttaaccccccaaa 12506308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 40985122 - 40985174
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 411  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||| ||||||    
T  40985122 tacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaat 40985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 539
Target Start/End: Original strand, 41889323 - 41889435
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatat-aaaaccaatggttgagattaga 526  Q
    |||| |||||||| |||||||| |||| |||||||||  || ||||||| | | |||||  ||||||||||||| || |||| ||| || |||||||| |    
T  41889323 gagtccatctttgttccatttaagaaggctccatttactccttttcactgtttggatgtgtgacatgtggcaaaaatgaaaatcaagggctgagattaaa 41889422  T
Q  527 aggcttagaaaaa 539  Q
    ||| || ||||||    
T  41889423 agggttggaaaaa 41889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 42578709 - 42578805
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||||||||| |    ||| |||||  ||||||||  | ||||||||  ||||||||||||| |||||| |||||| ||||||||    
T  42578709 gagtccatctttgctccatttatgtttgctcaatttaccccatttcaagtcatagatgtatgacatgtggcaaaaataaaatcaatggctgagatta 42578805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 44251611 - 44251663
Alignment:
Q  365 tttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    ||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||    
T  44251611 ttttttagttcctcaaatgagaagaatttagtattatgaagaaaagttaaccc 44251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 740 - 801
Alignment:
Q  361 acaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 422  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||||| ||||    
T  740 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 3617 - 3678
Alignment:
Q  361 acaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 422  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||||| ||||    
T  3617 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 6805 - 6862
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||| ||| ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  6805 tacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacc 6862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 7788 - 7845
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 416  Q
    |||||| ||| ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  7788 tacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacc 7845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 244 - 304
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    |||||||||| ||||||||||| | ||||| |||||||||||||||||||| |||||||||    
T  244 tacaattttttagttcctccaaataaggagggttttgtattatgaagaaaagttaaccccc 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 524
Target Start/End: Complemental strand, 13305 - 13214
Alignment:
Q  433 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||||||||||||||||||   |||| |||||| || ||||||||||| |||||  |||||||||||||| ||||  ||| ||||| |||||    
T  13305 catctttgctccatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaatttaaagtcaagggttgggatta 13214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 524
Target Start/End: Original strand, 12517 - 12613
Alignment:
Q  428 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 524  Q
    |||| ||||||||||| ||||| |   |||| |||||| || ||||||||||| | |||  |||||||||||||| ||||| ||| ||||| |||||    
T  12517 gagttcatctttgctctatttaagtttcctcaatttattccttttcactttattgttgtgtgacatgtggcaaatgtaaaaacaagggttgggatta 12613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 29277 - 29219
Alignment:
Q  360 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  29277 tacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaaccc 29219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 12316 - 12361
Alignment:
Q  378 ccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  12316 ccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaa 12361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 90942 - 90987
Alignment:
Q  378 ccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 423  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  90942 ccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaa 90987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 539
Target Start/End: Original strand, 20785 - 20851
Alignment:
Q  473 cactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaaggcttagaaaaa 539  Q
    |||||| |||||||  ||||||||| ||| ||||||||||||| |||||||| |||| || ||||||    
T  20785 cactttctagatgtgtgacatgtggtaaaaataaaaccaatggctgagattaaaaggtttggaaaaa 20851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 7082 - 7037
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 425  Q
    ||||||||| |||||||||||||||||||| | |||| ||||||||    
T  7082 aatgaggagggttttgtattatgaagaaaagtaaacctcccaaaac 7037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 15950 - 15893
Alignment:
Q  360 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 417  Q
    |||||||||| | |||| | |||||||||| ||||  |||||||||||||||||||||    
T  15950 tacaatttttaaattccccaaatgaggagattttttcattatgaagaaaaattaaccc 15893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 82829 - 82769
Alignment:
Q  360 tacaatttttgagttcc-tccaatgaggagagttttgtattatgaagaaaaattaaccccc 419  Q
    ||||||||| ||||||| || ||| |||||  ||||||||||||||||||||| |||||||    
T  82829 tacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataaaccccc 82769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 44988 - 45016
Alignment:
Q  380 aatgaggagagttttgtattatgaagaaa 408  Q
    |||||||||||||||||||||||||||||    
T  44988 aatgaggagagttttgtattatgaagaaa 45016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University