View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13214_low_28 (Length: 231)
Name: NF13214_low_28
Description: NF13214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13214_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 25307320 - 25307484
Alignment:
| Q |
21 |
gttttcaatgtaagtagtggccctggttgcttggcttcaatgtgggaatgaatgactaagaaccactaaaaatcaattgagaacaaagtgagtctgtgtg |
120 |
Q |
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| T |
25307320 |
gtttttaatgtaagtagtggccctggttgcttggctttaatgtgggaatgaatgactaagaaccactgaaaatcaattgagaacaaagtgagtctgtgtg |
25307419 |
T |
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| Q |
121 |
gctcattctcccgtagcaacaatgttgcacaccacaccctcttcctcctacgtccactcaacaac |
185 |
Q |
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| T |
25307420 |
gctcattctcccgtagcaacaatgttgcataccataccctcttcctcctacgtccactcaacaac |
25307484 |
T |
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