View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13218_high_32 (Length: 261)
Name: NF13218_high_32
Description: NF13218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13218_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 2684172 - 2683939
Alignment:
| Q |
9 |
gaagaatatgacttttcaattcacattttatgttattactgtgtaaagtttagtttgacataaaagtagagactaatgttgttgtacaactataaaagtc |
108 |
Q |
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| T |
2684172 |
gaagaaaatgacttttcaattcacattgtatgttattactgtgtaaagtttagtttgacataaa-gtagagactaatgttgt---acaactataaaagtc |
2684077 |
T |
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| Q |
109 |
gttattattgcgcatgcattgatacatgttttttgaatttgaatttgaatttggaaagcaaaatagaaatttggttggagtaggaaagaagttaagtagt |
208 |
Q |
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| T |
2684076 |
gttattattgcgcatgcattgatacatgttttttgaatttgaatttgaatttggaaagcaaaatagaaatttggttggagtaggaaagaagttaagtagt |
2683977 |
T |
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| Q |
209 |
cgtccttaatgaaagtagaaaaaagattcattgatgtt |
246 |
Q |
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| T |
2683976 |
cgtccttaatgaaagtagaaaaaagattcattgatgtt |
2683939 |
T |
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