View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13218_high_36 (Length: 237)
Name: NF13218_high_36
Description: NF13218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13218_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 50569584 - 50569364
Alignment:
| Q |
1 |
tacttgcttcttccatgtgagactgaactttcagcaagtttaatagctggtccattgtcaatcatcatcaatttcatctgtttcttcatttcacacttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50569584 |
tacttgcttcttccatgtgagactgaactttcagcaagtttaatagctggtccattgtcaatcatcatcaatttcatctgtttcttcatttcacacttca |
50569485 |
T |
|
| Q |
101 |
actcctttagcaatgagtccaaccatataagctgacatgctgctgcaaatgttactgcaatatattcaacttcatatgaggattaagtcaatatattttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
50569484 |
actcctttagcaatgagtccaaccatataagctgacatgctgctgcaaatgttactgcaatatattcaacttcataagaggattaagtcaatatattttc |
50569385 |
T |
|
| Q |
201 |
atataattttgaggagcttat |
221 |
Q |
| |
|
|||||||| |||||||||||| |
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|
| T |
50569384 |
atataattatgaggagcttat |
50569364 |
T |
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