View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13218_low_26 (Length: 318)

Name: NF13218_low_26
Description: NF13218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13218_low_26
NF13218_low_26
[»] chr2 (79 HSPs)
chr2 (74-305)||(13761750-13761971)
chr2 (174-305)||(24019970-24020101)
chr2 (174-288)||(25071454-25071575)
chr2 (120-266)||(18710200-18710346)
chr2 (174-266)||(5039859-5039951)
chr2 (177-256)||(16669139-16669218)
chr2 (174-288)||(41877823-41877937)
chr2 (174-266)||(4038305-4038397)
chr2 (174-266)||(31616351-31616443)
chr2 (174-261)||(41796712-41796799)
chr2 (181-300)||(43285709-43285828)
chr2 (189-275)||(6807492-6807578)
chr2 (177-274)||(2758918-2759015)
chr2 (174-234)||(650777-650837)
chr2 (174-234)||(2266149-2266209)
chr2 (174-234)||(2546321-2546381)
chr2 (174-234)||(3377476-3377536)
chr2 (174-266)||(4385490-4385582)
chr2 (178-298)||(6153395-6153515)
chr2 (174-234)||(7400388-7400448)
chr2 (174-234)||(8688959-8689019)
chr2 (174-234)||(8815297-8815357)
chr2 (174-234)||(13111739-13111799)
chr2 (174-234)||(15521563-15521623)
chr2 (174-234)||(16486966-16487026)
chr2 (174-234)||(17263750-17263810)
chr2 (174-234)||(24402049-24402109)
chr2 (174-234)||(28382677-28382737)
chr2 (174-234)||(29514917-29514977)
chr2 (174-234)||(36712533-36712593)
chr2 (174-234)||(37356253-37356313)
chr2 (174-234)||(38579005-38579065)
chr2 (174-234)||(39167835-39167895)
chr2 (177-261)||(40869329-40869413)
chr2 (174-234)||(41322840-41322900)
chr2 (174-266)||(43135701-43135793)
chr2 (174-234)||(43507559-43507619)
chr2 (178-261)||(6760574-6760657)
chr2 (174-288)||(6222582-6222696)
chr2 (74-300)||(13351535-13351760)
chr2 (174-234)||(4453520-4453580)
chr2 (174-234)||(21865331-21865391)
chr2 (174-234)||(26911595-26911655)
chr2 (174-234)||(36999573-36999633)
chr2 (174-234)||(38880779-38880839)
chr2 (174-234)||(40024939-40024999)
chr2 (110-201)||(41877729-41877820)
chr2 (174-232)||(42132751-42132809)
chr2 (177-234)||(10393032-10393089)
chr2 (174-234)||(6232277-6232337)
chr2 (174-234)||(8070617-8070677)
chr2 (174-234)||(9887076-9887136)
chr2 (178-234)||(10839577-10839633)
chr2 (174-300)||(23356908-23357041)
chr2 (174-268)||(34884894-34884989)
chr2 (174-228)||(7213664-7213718)
chr2 (174-234)||(38842919-38842979)
chr2 (174-234)||(44275746-44275806)
chr2 (174-288)||(2221473-2221594)
chr2 (174-233)||(9053128-9053187)
chr2 (176-294)||(15250191-15250316)
chr2 (181-234)||(2047318-2047371)
chr2 (223-300)||(2757312-2757389)
chr2 (181-234)||(8340070-8340123)
chr2 (174-298)||(10727914-10728045)
chr2 (178-234)||(598979-599035)
chr2 (174-234)||(7823544-7823604)
chr2 (149-232)||(7569825-7569908)
chr2 (77-185)||(15250072-15250180)
chr2 (74-185)||(23357050-23357155)
chr2 (181-234)||(13527901-13527954)
chr2 (174-234)||(4055974-4056034)
chr2 (181-260)||(5520032-5520118)
chr2 (174-266)||(37674503-37674595)
chr2 (74-141)||(24019846-24019917)
chr2 (217-286)||(3337194-3337263)
chr2 (110-234)||(7511707-7511831)
chr2 (110-234)||(7515991-7516115)
chr2 (73-141)||(6153558-6153626)
[»] chr8 (74 HSPs)
chr8 (74-305)||(39677349-39677580)
chr8 (174-294)||(13970061-13970181)
chr8 (174-300)||(29189653-29189786)
chr8 (174-300)||(39746873-39746999)
chr8 (174-299)||(3427556-3427681)
chr8 (121-298)||(42203339-42203516)
chr8 (174-266)||(31688018-31688110)
chr8 (174-266)||(36112809-36112901)
chr8 (174-266)||(1893809-1893901)
chr8 (174-266)||(41313461-41313553)
chr8 (174-266)||(43276739-43276831)
chr8 (174-288)||(2855168-2855282)
chr8 (174-234)||(2642418-2642478)
chr8 (174-234)||(6338404-6338464)
chr8 (174-234)||(8270992-8271052)
chr8 (174-234)||(10618892-10618952)
chr8 (174-234)||(28716750-28716810)
chr8 (174-234)||(31581780-31581840)
chr8 (174-234)||(36681447-36681507)
chr8 (174-234)||(37560529-37560589)
chr8 (174-234)||(39702392-39702452)
chr8 (174-234)||(41693906-41693966)
chr8 (174-234)||(44827317-44827377)
chr8 (174-234)||(45141455-45141515)
chr8 (174-232)||(17081740-17081798)
chr8 (174-232)||(28709393-28709451)
chr8 (174-234)||(11741103-11741163)
chr8 (174-234)||(16422915-16422975)
chr8 (174-234)||(17115624-17115684)
chr8 (174-234)||(23676958-23677018)
chr8 (174-234)||(25023392-25023452)
chr8 (174-234)||(27781188-27781248)
chr8 (174-234)||(31478162-31478222)
chr8 (174-274)||(32099623-32099723)
chr8 (174-234)||(32541309-32541369)
chr8 (174-234)||(39871350-39871410)
chr8 (174-234)||(44157283-44157343)
chr8 (174-261)||(9211072-9211159)
chr8 (174-234)||(3511304-3511364)
chr8 (174-234)||(22877925-22877985)
chr8 (174-234)||(35243352-35243412)
chr8 (174-234)||(36590223-36590282)
chr8 (174-234)||(38171427-38171487)
chr8 (174-234)||(39320066-39320126)
chr8 (174-234)||(40223084-40223143)
chr8 (174-234)||(42142735-42142795)
chr8 (175-234)||(38780748-38780807)
chr8 (174-275)||(1363751-1363852)
chr8 (177-234)||(43849207-43849264)
chr8 (177-234)||(44263396-44263453)
chr8 (174-234)||(9370316-9370376)
chr8 (174-234)||(11298041-11298101)
chr8 (174-234)||(13888327-13888387)
chr8 (174-261)||(34395319-34395407)
chr8 (174-245)||(37587707-37587778)
chr8 (101-229)||(44318243-44318371)
chr8 (177-234)||(7378937-7378994)
chr8 (174-234)||(24652353-24652413)
chr8 (67-118)||(29189855-29189906)
chr8 (211-293)||(14171685-14171767)
chr8 (189-275)||(37801089-37801175)
chr8 (178-234)||(40045489-40045546)
chr8 (177-234)||(40551898-40551954)
chr8 (189-266)||(2732313-2732390)
chr8 (177-297)||(8436454-8436581)
chr8 (178-234)||(10651115-10651171)
chr8 (178-234)||(22957399-22957455)
chr8 (181-228)||(16831619-16831666)
chr8 (212-275)||(45152131-45152194)
chr8 (74-115)||(2855063-2855104)
chr8 (181-222)||(26293860-26293901)
chr8 (181-222)||(26307117-26307158)
chr8 (72-141)||(44262987-44263056)
chr8 (74-134)||(40045366-40045426)
[»] chr4 (112 HSPs)
chr4 (177-305)||(20511495-20511623)
chr4 (174-305)||(36196957-36197088)
chr4 (174-305)||(21633739-21633877)
chr4 (110-300)||(17715583-17715773)
chr4 (175-300)||(41864015-41864140)
chr4 (174-300)||(11050400-11050526)
chr4 (174-300)||(4465406-4465532)
chr4 (174-288)||(20148749-20148863)
chr4 (174-266)||(37115252-37115344)
chr4 (174-266)||(55495849-55495941)
chr4 (172-294)||(24954155-24954284)
chr4 (174-300)||(37832005-37832130)
chr4 (100-266)||(45780726-45780892)
chr4 (178-266)||(29664016-29664104)
chr4 (174-266)||(31679052-31679144)
chr4 (177-300)||(37047115-37047239)
chr4 (174-298)||(42085659-42085783)
chr4 (174-266)||(43225646-43225738)
chr4 (189-300)||(8716853-8716964)
chr4 (110-234)||(42124680-42124804)
chr4 (174-256)||(48056585-48056667)
chr4 (221-298)||(3932179-3932256)
chr4 (174-259)||(35777362-35777447)
chr4 (180-300)||(52713583-52713710)
chr4 (174-234)||(3009794-3009854)
chr4 (174-234)||(4517192-4517252)
chr4 (174-234)||(4939387-4939447)
chr4 (174-234)||(5465411-5465471)
chr4 (174-234)||(7706455-7706515)
chr4 (174-234)||(8829816-8829876)
chr4 (174-234)||(11151940-11152000)
chr4 (174-234)||(12233968-12234028)
chr4 (174-234)||(18582927-18582987)
chr4 (174-234)||(21369963-21370023)
chr4 (174-234)||(22892611-22892671)
chr4 (174-234)||(22944275-22944335)
chr4 (174-234)||(25440485-25440545)
chr4 (174-234)||(26826604-26826664)
chr4 (174-234)||(27185633-27185693)
chr4 (174-234)||(28307338-28307398)
chr4 (174-234)||(29413614-29413674)
chr4 (174-266)||(33005077-33005169)
chr4 (174-234)||(45906222-45906282)
chr4 (174-234)||(46895366-46895426)
chr4 (174-234)||(52670077-52670137)
chr4 (174-234)||(53407272-53407332)
chr4 (174-234)||(55358339-55358399)
chr4 (174-234)||(55764642-55764702)
chr4 (175-234)||(8941988-8942047)
chr4 (174-261)||(40497370-40497457)
chr4 (174-261)||(55829087-55829174)
chr4 (75-185)||(21633886-21633996)
chr4 (183-260)||(30562824-30562901)
chr4 (177-234)||(37970380-37970437)
chr4 (174-234)||(9031996-9032056)
chr4 (174-234)||(9043611-9043671)
chr4 (178-234)||(11600770-11600826)
chr4 (174-234)||(19513883-19513943)
chr4 (174-234)||(22430718-22430778)
chr4 (174-234)||(23867870-23867930)
chr4 (174-234)||(27397767-27397827)
chr4 (174-234)||(35822300-35822360)
chr4 (174-234)||(42116979-42117039)
chr4 (178-234)||(51011066-51011122)
chr4 (174-234)||(55856528-55856588)
chr4 (174-234)||(56372518-56372578)
chr4 (174-261)||(32101709-32101796)
chr4 (174-234)||(4355593-4355653)
chr4 (72-233)||(26443286-26443447)
chr4 (174-234)||(30366147-30366207)
chr4 (174-234)||(31338501-31338561)
chr4 (174-234)||(33115058-33115118)
chr4 (174-234)||(39087559-39087619)
chr4 (174-274)||(44525720-44525820)
chr4 (174-266)||(47417444-47417536)
chr4 (174-234)||(56270092-56270152)
chr4 (174-300)||(23113404-23113537)
chr4 (174-261)||(31435089-31435176)
chr4 (174-261)||(35580919-35581006)
chr4 (176-234)||(22038358-22038416)
chr4 (174-228)||(35468098-35468152)
chr4 (174-232)||(53224310-53224368)
chr4 (177-234)||(4391709-4391766)
chr4 (174-298)||(15636025-15636156)
chr4 (174-234)||(23162684-23162745)
chr4 (177-234)||(25235231-25235288)
chr4 (177-234)||(35190617-35190674)
chr4 (174-267)||(50502323-50502416)
chr4 (177-234)||(55684781-55684838)
chr4 (174-234)||(4392727-4392786)
chr4 (178-234)||(36008019-36008075)
chr4 (71-141)||(36196834-36196904)
chr4 (172-269)||(40119901-40120005)
chr4 (174-234)||(43078197-43078257)
chr4 (174-234)||(44442165-44442224)
chr4 (181-300)||(31953245-31953364)
chr4 (174-237)||(38048875-38048938)
chr4 (174-209)||(53273201-53273236)
chr4 (174-268)||(31011004-31011098)
chr4 (211-285)||(44375726-44375800)
chr4 (219-288)||(30623322-30623391)
chr4 (74-115)||(41864207-41864248)
chr4 (192-300)||(1031388-1031495)
chr4 (199-234)||(35842610-35842645)
chr4 (155-234)||(49239220-49239299)
chr4 (72-114)||(30623376-30623418)
chr4 (180-234)||(37337728-37337782)
chr4 (74-115)||(20511386-20511427)
chr4 (177-234)||(36486386-36486443)
chr4 (101-141)||(45906129-45906169)
chr4 (221-297)||(52707930-52708006)
chr4 (174-234)||(52708000-52708059)
[»] chr5 (80 HSPs)
chr5 (174-300)||(11100687-11100813)
chr5 (174-299)||(648617-648742)
chr5 (174-288)||(16474857-16474978)
chr5 (172-298)||(7896597-7896722)
chr5 (174-266)||(4221432-4221524)
chr5 (154-234)||(4657592-4657672)
chr5 (177-298)||(3669630-3669751)
chr5 (174-266)||(9587145-9587237)
chr5 (174-266)||(39246796-39246888)
chr5 (174-234)||(1174870-1174930)
chr5 (174-234)||(2236507-2236567)
chr5 (174-234)||(3670364-3670424)
chr5 (177-300)||(5381862-5381992)
chr5 (174-234)||(5997885-5997945)
chr5 (174-234)||(8023975-8024035)
chr5 (174-234)||(9160683-9160743)
chr5 (174-234)||(12363603-12363663)
chr5 (174-234)||(12774662-12774722)
chr5 (174-266)||(13156845-13156937)
chr5 (174-234)||(13228464-13228524)
chr5 (174-234)||(14647348-14647408)
chr5 (174-234)||(19347792-19347852)
chr5 (174-234)||(24794058-24794118)
chr5 (174-234)||(27130419-27130479)
chr5 (174-234)||(30299784-30299844)
chr5 (174-234)||(30412603-30412663)
chr5 (174-234)||(31168978-31169038)
chr5 (174-234)||(32381665-32381725)
chr5 (174-234)||(32382935-32382995)
chr5 (174-234)||(35235718-35235778)
chr5 (174-234)||(35236658-35236718)
chr5 (174-234)||(35640026-35640086)
chr5 (174-234)||(36685902-36685962)
chr5 (174-234)||(39744533-39744593)
chr5 (174-232)||(30774185-30774243)
chr5 (178-234)||(1711194-1711250)
chr5 (174-234)||(2178846-2178906)
chr5 (178-266)||(2671504-2671592)
chr5 (174-234)||(3037416-3037476)
chr5 (174-234)||(5591674-5591734)
chr5 (174-234)||(6603901-6603961)
chr5 (174-234)||(10697355-10697415)
chr5 (174-234)||(12713398-12713458)
chr5 (174-234)||(15530521-15530581)
chr5 (174-234)||(19525835-19525895)
chr5 (174-266)||(29392066-29392158)
chr5 (174-234)||(39275509-39275569)
chr5 (177-268)||(13936281-13936372)
chr5 (114-298)||(25872155-25872339)
chr5 (174-300)||(13921811-13921936)
chr5 (177-234)||(11062898-11062955)
chr5 (177-234)||(26699097-26699154)
chr5 (177-234)||(26968830-26968887)
chr5 (174-234)||(4379344-4379404)
chr5 (174-234)||(5521384-5521444)
chr5 (170-234)||(6349422-6349486)
chr5 (174-234)||(11663882-11663942)
chr5 (174-234)||(15443542-15443602)
chr5 (174-234)||(19956299-19956358)
chr5 (177-300)||(22977123-22977253)
chr5 (174-234)||(43402530-43402590)
chr5 (175-234)||(36027982-36028041)
chr5 (174-268)||(2497649-2497743)
chr5 (174-274)||(6893330-6893430)
chr5 (174-234)||(7651726-7651786)
chr5 (110-185)||(16474773-16474848)
chr5 (178-234)||(9627145-9627201)
chr5 (175-234)||(42323598-42323657)
chr5 (71-141)||(13936129-13936199)
chr5 (181-234)||(4875737-4875790)
chr5 (174-226)||(23920543-23920595)
chr5 (174-259)||(7157416-7157500)
chr5 (174-288)||(31408008-31408127)
chr5 (76-140)||(19347674-19347737)
chr5 (212-275)||(8638214-8638277)
chr5 (100-141)||(1711307-1711348)
chr5 (100-141)||(9587291-9587332)
chr5 (100-141)||(41826388-41826429)
chr5 (81-141)||(4379230-4379290)
chr5 (189-249)||(41471885-41471945)
[»] chr3 (88 HSPs)
chr3 (174-300)||(39719440-39719566)
chr3 (174-300)||(42217750-42217876)
chr3 (177-297)||(193487-193607)
chr3 (174-266)||(44748759-44748851)
chr3 (175-266)||(40479994-40480085)
chr3 (181-300)||(52595273-52595392)
chr3 (178-288)||(33897844-33897954)
chr3 (174-268)||(37489895-37489989)
chr3 (174-294)||(44947139-44947266)
chr3 (174-266)||(21707238-21707330)
chr3 (174-266)||(43525830-43525922)
chr3 (174-266)||(46247937-46248029)
chr3 (174-266)||(48943076-48943168)
chr3 (174-234)||(2121914-2121974)
chr3 (174-234)||(2579932-2579992)
chr3 (177-300)||(2851907-2852037)
chr3 (174-234)||(4240365-4240425)
chr3 (174-266)||(8872960-8873052)
chr3 (174-234)||(16127144-16127204)
chr3 (174-234)||(19948323-19948383)
chr3 (174-234)||(24536559-24536619)
chr3 (174-234)||(28676895-28676955)
chr3 (174-234)||(29081286-29081346)
chr3 (174-234)||(29718206-29718266)
chr3 (174-234)||(30864513-30864573)
chr3 (174-234)||(35499688-35499748)
chr3 (174-234)||(37088371-37088431)
chr3 (174-234)||(37528728-37528788)
chr3 (174-266)||(37713938-37714030)
chr3 (174-274)||(39876701-39876801)
chr3 (174-234)||(40563368-40563428)
chr3 (174-274)||(41246336-41246436)
chr3 (174-234)||(42497081-42497141)
chr3 (174-234)||(44845711-44845771)
chr3 (174-234)||(47897611-47897671)
chr3 (174-234)||(50499849-50499909)
chr3 (174-234)||(52794982-52795042)
chr3 (178-261)||(2598686-2598769)
chr3 (175-300)||(37713071-37713204)
chr3 (174-232)||(46318766-46318824)
chr3 (174-232)||(48378313-48378371)
chr3 (174-234)||(21603885-21603945)
chr3 (174-234)||(26541047-26541107)
chr3 (174-234)||(38185857-38185917)
chr3 (174-234)||(45345013-45345073)
chr3 (174-234)||(45693391-45693451)
chr3 (174-234)||(46972120-46972180)
chr3 (174-234)||(49853048-49853108)
chr3 (174-234)||(50317034-50317094)
chr3 (174-234)||(51709098-51709158)
chr3 (174-234)||(52166095-52166155)
chr3 (174-234)||(52857983-52858043)
chr3 (178-298)||(52931086-52931206)
chr3 (174-234)||(53779118-53779178)
chr3 (174-266)||(54541908-54542000)
chr3 (174-234)||(54672185-54672245)
chr3 (174-234)||(55305114-55305174)
chr3 (174-233)||(30548831-30548890)
chr3 (174-288)||(52868130-52868244)
chr3 (177-234)||(33391993-33392050)
chr3 (174-234)||(12063733-12063793)
chr3 (178-234)||(25570470-25570526)
chr3 (190-274)||(35100284-35100368)
chr3 (174-234)||(46627502-46627562)
chr3 (174-234)||(52225372-52225432)
chr3 (178-300)||(32026341-32026470)
chr3 (177-234)||(45368700-45368757)
chr3 (174-234)||(29203032-29203092)
chr3 (174-234)||(38891991-38892051)
chr3 (174-234)||(51003334-51003394)
chr3 (177-297)||(5506719-5506846)
chr3 (177-234)||(24628204-24628261)
chr3 (177-234)||(41518451-41518508)
chr3 (181-234)||(42465032-42465085)
chr3 (174-268)||(20450545-20450646)
chr3 (177-234)||(7041151-7041208)
chr3 (227-300)||(41538451-41538524)
chr3 (174-207)||(47173655-47173688)
chr3 (178-261)||(612143-612226)
chr3 (175-230)||(32982921-32982976)
chr3 (74-141)||(45368577-45368644)
chr3 (72-141)||(52225257-52225319)
chr3 (174-228)||(30814261-30814315)
chr3 (189-234)||(22257755-22257800)
chr3 (239-300)||(29757473-29757534)
chr3 (96-162)||(40480118-40480184)
chr3 (174-234)||(27446514-27446574)
chr3 (101-141)||(37490042-37490082)
[»] chr1 (97 HSPs)
chr1 (174-300)||(33151984-33152117)
chr1 (174-288)||(34087056-34087170)
chr1 (174-266)||(13121537-13121629)
chr1 (177-300)||(41004905-41005035)
chr1 (174-303)||(50540862-50540991)
chr1 (174-266)||(7710907-7710999)
chr1 (174-266)||(17046819-17046911)
chr1 (174-298)||(25602076-25602200)
chr1 (174-266)||(38967417-38967509)
chr1 (174-266)||(39826690-39826782)
chr1 (177-300)||(49240200-49240323)
chr1 (174-294)||(7781082-7781209)
chr1 (175-288)||(42963919-42964032)
chr1 (177-266)||(47134484-47134573)
chr1 (174-234)||(1918115-1918175)
chr1 (174-234)||(2498012-2498072)
chr1 (174-234)||(19898893-19898953)
chr1 (174-234)||(26204364-26204424)
chr1 (174-234)||(29586248-29586308)
chr1 (174-234)||(29704069-29704129)
chr1 (174-234)||(30721608-30721668)
chr1 (174-234)||(30774171-30774231)
chr1 (174-234)||(31150410-31150470)
chr1 (174-234)||(34319479-34319539)
chr1 (174-234)||(36301090-36301150)
chr1 (174-234)||(36838680-36838740)
chr1 (174-234)||(42064302-42064362)
chr1 (174-234)||(44909930-44909990)
chr1 (175-234)||(40887966-40888025)
chr1 (172-274)||(7024911-7025013)
chr1 (178-300)||(18347335-18347457)
chr1 (180-261)||(9169151-9169232)
chr1 (175-288)||(44956369-44956482)
chr1 (174-234)||(322955-323015)
chr1 (174-234)||(1507728-1507788)
chr1 (174-234)||(3270748-3270808)
chr1 (174-234)||(3661035-3661095)
chr1 (178-234)||(15313337-15313393)
chr1 (174-234)||(17499870-17499930)
chr1 (174-234)||(32368324-32368384)
chr1 (174-234)||(33524618-33524678)
chr1 (174-234)||(49220458-49220518)
chr1 (174-234)||(50351122-50351182)
chr1 (177-234)||(29374423-29374480)
chr1 (174-234)||(5697567-5697627)
chr1 (174-234)||(22099008-22099068)
chr1 (174-234)||(26843841-26843901)
chr1 (174-234)||(36043285-36043345)
chr1 (174-234)||(37703760-37703820)
chr1 (174-234)||(38676579-38676639)
chr1 (178-234)||(42614120-42614176)
chr1 (178-234)||(50171282-50171338)
chr1 (175-234)||(16085596-16085655)
chr1 (212-300)||(31259494-31259584)
chr1 (175-234)||(34318497-34318556)
chr1 (174-288)||(46056357-46056471)
chr1 (184-234)||(46369904-46369954)
chr1 (174-232)||(52703098-52703156)
chr1 (181-274)||(30495140-30495233)
chr1 (174-234)||(3391210-3391270)
chr1 (174-234)||(15348914-15348974)
chr1 (151-227)||(33632305-33632381)
chr1 (174-234)||(37672335-37672395)
chr1 (178-234)||(49185170-49185226)
chr1 (174-234)||(51422969-51423029)
chr1 (175-234)||(39583187-39583246)
chr1 (175-234)||(46928969-46929028)
chr1 (174-236)||(25134938-25135000)
chr1 (110-185)||(52703165-52703240)
chr1 (181-234)||(36379131-36379184)
chr1 (172-233)||(40935893-40935954)
chr1 (177-234)||(43727114-43727171)
chr1 (178-234)||(9894931-9894987)
chr1 (174-234)||(13570778-13570838)
chr1 (231-299)||(13800826-13800894)
chr1 (76-140)||(29374302-29374366)
chr1 (174-234)||(49822152-49822212)
chr1 (175-266)||(44718924-44719015)
chr1 (174-228)||(9769964-9770018)
chr1 (174-232)||(40719564-40719622)
chr1 (115-205)||(52071202-52071292)
chr1 (170-234)||(6814113-6814177)
chr1 (174-234)||(8221220-8221280)
chr1 (77-185)||(25134821-25134929)
chr1 (223-300)||(19715386-19715463)
chr1 (174-300)||(28868920-28869056)
chr1 (175-242)||(2028953-2029020)
chr1 (199-234)||(2479261-2479296)
chr1 (178-261)||(10628787-10628870)
chr1 (199-234)||(33561894-33561929)
chr1 (174-300)||(46087912-46088045)
chr1 (216-286)||(27264510-27264580)
chr1 (201-267)||(27659317-27659383)
chr1 (74-115)||(28429018-28429059)
chr1 (73-141)||(18347513-18347581)
chr1 (174-202)||(28429119-28429147)
chr1 (69-141)||(46088098-46088170)
[»] scaffold0343 (1 HSPs)
scaffold0343 (174-288)||(9316-9430)
[»] chr6 (53 HSPs)
chr6 (221-305)||(22756562-22756646)
chr6 (174-300)||(23648280-23648406)
chr6 (174-266)||(31099983-31100075)
chr6 (174-300)||(5301529-5301662)
chr6 (176-298)||(6104608-6104729)
chr6 (175-305)||(11443033-11443170)
chr6 (174-300)||(34439769-34439902)
chr6 (174-294)||(21894338-21894465)
chr6 (174-234)||(558447-558507)
chr6 (174-234)||(2442511-2442571)
chr6 (174-266)||(10856219-10856311)
chr6 (174-234)||(12297451-12297511)
chr6 (174-234)||(14227536-14227596)
chr6 (174-234)||(20805076-20805136)
chr6 (174-234)||(30811149-30811209)
chr6 (174-234)||(32731845-32731905)
chr6 (174-234)||(34685016-34685076)
chr6 (174-288)||(3107945-3108066)
chr6 (174-234)||(2970761-2970821)
chr6 (174-234)||(5681606-5681666)
chr6 (174-234)||(5943078-5943138)
chr6 (174-234)||(7317611-7317671)
chr6 (174-234)||(12432621-12432681)
chr6 (174-234)||(28076509-28076569)
chr6 (174-234)||(33540726-33540786)
chr6 (174-234)||(34232915-34232975)
chr6 (178-234)||(34904037-34904093)
chr6 (174-300)||(12140806-12140939)
chr6 (174-232)||(33453822-33453880)
chr6 (178-234)||(29414924-29414980)
chr6 (174-266)||(31451923-31452014)
chr6 (174-232)||(3636643-3636701)
chr6 (178-251)||(5893877-5893950)
chr6 (181-234)||(6709696-6709749)
chr6 (174-234)||(11015676-11015736)
chr6 (174-234)||(31049420-31049480)
chr6 (176-234)||(29823036-29823094)
chr6 (174-234)||(15591151-15591211)
chr6 (174-232)||(20563480-20563538)
chr6 (178-234)||(7292549-7292605)
chr6 (115-199)||(3832337-3832421)
chr6 (68-115)||(3832407-3832454)
chr6 (223-300)||(10432378-10432455)
chr6 (181-229)||(1225525-1225573)
chr6 (174-206)||(1806343-1806375)
chr6 (178-234)||(9896796-9896852)
chr6 (78-141)||(29823149-29823212)
chr6 (100-141)||(1806428-1806469)
chr6 (231-300)||(10544405-10544474)
chr6 (100-141)||(12297357-12297398)
chr6 (215-300)||(20584433-20584518)
chr6 (74-123)||(22756521-22756570)
chr6 (189-233)||(19415382-19415426)
[»] chr7 (71 HSPs)
chr7 (174-300)||(11465981-11466107)
chr7 (174-296)||(27869508-27869630)
chr7 (174-298)||(17192386-17192510)
chr7 (174-266)||(42375759-42375851)
chr7 (177-300)||(46757800-46757924)
chr7 (174-266)||(47587081-47587173)
chr7 (174-300)||(17844631-17844764)
chr7 (174-266)||(19831966-19832058)
chr7 (174-234)||(482990-483050)
chr7 (174-234)||(9487494-9487554)
chr7 (178-266)||(21313765-21313853)
chr7 (174-234)||(21374720-21374780)
chr7 (174-234)||(31511387-31511447)
chr7 (174-234)||(33026963-33027023)
chr7 (17-73)||(34540975-34541031)
chr7 (174-234)||(34709320-34709380)
chr7 (174-234)||(35587666-35587726)
chr7 (174-234)||(36246384-36246444)
chr7 (174-234)||(36407315-36407375)
chr7 (174-266)||(36436240-36436332)
chr7 (174-234)||(40258944-40259004)
chr7 (174-234)||(40637168-40637228)
chr7 (174-234)||(42587391-42587451)
chr7 (174-234)||(43254190-43254250)
chr7 (174-234)||(44596697-44596757)
chr7 (174-234)||(45686924-45686984)
chr7 (181-300)||(35000806-35000925)
chr7 (174-299)||(23029877-23030009)
chr7 (177-234)||(27655681-27655738)
chr7 (174-234)||(10312037-10312097)
chr7 (174-234)||(21254705-21254765)
chr7 (174-234)||(21742059-21742119)
chr7 (174-234)||(27089664-27089724)
chr7 (174-234)||(27188577-27188637)
chr7 (174-234)||(43134491-43134551)
chr7 (174-234)||(45222081-45222141)
chr7 (174-234)||(48832061-48832121)
chr7 (175-257)||(45672382-45672464)
chr7 (174-275)||(22642218-22642319)
chr7 (174-234)||(12345075-12345135)
chr7 (174-234)||(33203676-33203736)
chr7 (174-234)||(44743804-44743864)
chr7 (174-234)||(47470970-47471030)
chr7 (180-300)||(47584185-47584305)
chr7 (178-234)||(48313432-48313488)
chr7 (177-234)||(46879532-46879589)
chr7 (178-300)||(1342867-1342997)
chr7 (174-234)||(28425619-28425679)
chr7 (174-234)||(40106013-40106073)
chr7 (174-234)||(48590801-48590861)
chr7 (174-234)||(49148419-49148479)
chr7 (199-298)||(32168931-32169030)
chr7 (175-234)||(38531191-38531249)
chr7 (178-232)||(39698930-39698984)
chr7 (177-234)||(791341-791398)
chr7 (177-234)||(19757524-19757581)
chr7 (174-234)||(9485803-9485863)
chr7 (76-140)||(27655795-27655859)
chr7 (178-234)||(40893463-40893519)
chr7 (189-288)||(7884638-7884736)
chr7 (221-300)||(33609064-33609143)
chr7 (182-228)||(38481375-38481421)
chr7 (181-234)||(36612119-36612172)
chr7 (76-140)||(11466161-11466225)
chr7 (74-141)||(19757637-19757704)
chr7 (174-228)||(48620544-48620598)
chr7 (178-215)||(21316611-21316648)
chr7 (172-292)||(48729547-48729667)
chr7 (177-234)||(24170866-24170923)
chr7 (120-185)||(40893384-40893450)
chr7 (214-242)||(12651080-12651108)
[»] scaffold0087 (1 HSPs)
scaffold0087 (174-266)||(52989-53081)
[»] scaffold0016 (2 HSPs)
scaffold0016 (174-288)||(84342-84456)
scaffold0016 (174-234)||(93386-93446)
[»] scaffold0027 (1 HSPs)
scaffold0027 (100-234)||(41765-41899)
[»] scaffold0362 (1 HSPs)
scaffold0362 (174-266)||(5494-5586)
[»] scaffold1360 (1 HSPs)
scaffold1360 (221-298)||(1174-1251)
[»] scaffold1632 (1 HSPs)
scaffold1632 (174-234)||(37-97)
[»] scaffold0418 (1 HSPs)
scaffold0418 (174-261)||(4578-4665)
[»] scaffold0197 (2 HSPs)
scaffold0197 (178-234)||(28076-28132)
scaffold0197 (174-266)||(30145-30237)
[»] scaffold0116 (1 HSPs)
scaffold0116 (174-234)||(22681-22741)
[»] scaffold0031 (1 HSPs)
scaffold0031 (174-234)||(126760-126820)
[»] scaffold0011 (1 HSPs)
scaffold0011 (174-234)||(63930-63990)
[»] scaffold0002 (2 HSPs)
scaffold0002 (174-234)||(431344-431404)
scaffold0002 (174-234)||(119239-119299)
[»] scaffold0122 (1 HSPs)
scaffold0122 (175-234)||(12717-12776)
[»] scaffold0246 (1 HSPs)
scaffold0246 (174-234)||(7143-7203)
[»] scaffold0009 (1 HSPs)
scaffold0009 (174-234)||(192099-192159)
[»] scaffold0041 (2 HSPs)
scaffold0041 (178-234)||(72765-72821)
scaffold0041 (120-185)||(72834-72900)
[»] scaffold0076 (1 HSPs)
scaffold0076 (174-226)||(10849-10901)
[»] scaffold0075 (1 HSPs)
scaffold0075 (174-209)||(27159-27194)
[»] scaffold0347 (1 HSPs)
scaffold0347 (212-267)||(11846-11901)


Alignment Details
Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 74 - 305
Target Start/End: Original strand, 13761750 - 13761971
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttac 173  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||       ||||||||||||||||       | |||||||||||||||||||||||    
T  13761750 gggtctgtttggtaagcccactaaatgagcttatagcttatagct-------tataagctcgtttgacaaaaaa-gctctgtttggtaatggtctcttac 13761841  T
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13761842 cacgagcttataagctatttttcagaagtta--ccaagtagcgtttgagcttatagcttatcatcttttcttccatttatacccttattattttatctaa 13761939  T
Q  274 aaaccaattttacccattataatttatcactc 305  Q
    ||||||||||||||||||||||||||||||||    
T  13761940 aaaccaattttacccattataatttatcactc 13761971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 174 - 305
Target Start/End: Original strand, 24019970 - 24020101
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  24019970 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcatcttttattccatttataccattattattttatctaa 24020069  T
Q  274 aaaccaattttacccattataatttatcactc 305  Q
    ||||||||||||||||||||||||||||||||    
T  24020070 aaaccaattttacccattataatttatcactc 24020101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 25071454 - 25071575
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  25071454 cacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattattt 25071553  T
Q  267 tatctaaaaaccaattttaccc 288  Q
    ||||||||||||| || |||||    
T  25071554 tatctaaaaaccatttataccc 25071575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 18710200 - 18710346
Alignment:
Q  120 atagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgttt 219  Q
    ||||||||||||||||||||||       | ||||||||||||   | | |||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  18710200 atagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttataagctattttttagaagctattccaagtagcgttt 18710299  T
Q  220 gagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  18710300 gagcttatagcttctcactttttcttccaattttacccttattattt 18710346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 5039859 - 5039951
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  5039859 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 5039951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 16669139 - 16669218
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacc 256  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||    
T  16669139 gagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatcatcttttattccatttttacc 16669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 41877823 - 41877937
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||| |||||||| || | |||||||   ||||| |||||    
T  41877823 cacgagcttataaactatttttcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttcaatctttacccttgctattttctctaa 41877922  T
Q  274 aaaccaattttaccc 288  Q
    ||||||||| |||||    
T  41877923 aaaccaattctaccc 41877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 4038397 - 4038305
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  4038397 cacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 4038305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 31616443 - 31616351
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  31616443 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31616351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 41796799 - 41796712
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  41796799 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 41796712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 43285709 - 43285828
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaa 280  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||| | || ||||||||| |||| |||||||  |||     
T  43285709 ttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttctacttttacccttattatttcatctaaattccat 43285808  T
Q  281 ttttacccattataatttat 300  Q
    ||||||||| || |||||||    
T  43285809 ttttacccactacaatttat 43285828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 6807492 - 6807578
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaa 275  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||    
T  6807492 tatttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttcttccaattttacccttattattttatctaaaa 6807578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 2758918 - 2759015
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||||||| |||||||| ||||||||| | |||| |||||    
T  2758918 gagcttataagctattttttagacgctattccaagtagcgtttgagcttataatttatcatcttttattccatttttacccttattagtttaactaaa 2759015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 650837 - 650777
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  650837 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 650777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 2266209 - 2266149
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2266209 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 2546381 - 2546321
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2546381 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3377476 - 3377536
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3377476 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3377536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 4385582 - 4385490
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  4385582 cacgagcttataagctatttttcagaaactatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 4385490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 6153515 - 6153395
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaac 277  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||||| || || ||||||||| |||| || ||||  |    
T  6153515 agcttataagctatttttcagaagttattccaagtagtgtttgagcttatagcttctcattttttctttcaattttacccttattatttcatttaaattc 6153416  T
Q  278 caattttacccattataattt 298  Q
    || ||||| |||||| |||||    
T  6153415 catttttatccattacaattt 6153395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 7400448 - 7400388
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7400448 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 7400388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8689019 - 8688959
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8689019 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8688959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 8815297 - 8815357
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8815297 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8815357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 13111799 - 13111739
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13111799 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 13111739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15521563 - 15521623
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15521563 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 15521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 16486966 - 16487026
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16486966 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 16487026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 17263810 - 17263750
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17263810 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 17263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 24402109 - 24402049
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24402109 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24402049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 28382737 - 28382677
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28382737 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 29514917 - 29514977
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29514917 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29514977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36712593 - 36712533
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36712593 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36712533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 37356253 - 37356313
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37356253 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 38579065 - 38579005
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38579065 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 38579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 39167835 - 39167895
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39167835 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 39167895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 40869413 - 40869329
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  40869413 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 40869329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 41322840 - 41322900
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41322840 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41322900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 43135701 - 43135793
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||  | || ||||||||| ||||    
T  43135701 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctttgaattttacccttattattt 43135793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 43507619 - 43507559
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43507619 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 43507559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 6760657 - 6760574
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  6760657 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 6760574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 6222696 - 6222582
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||| ||| ||| ||| | |||||||   ||||| |||||    
T  6222696 cacgagcttataagctatttttcagaagctatttcaagcagcatttgaacttatagcttatcatttttgctttcatctttacccttgctattttctctaa 6222597  T
Q  274 aaaccaattttaccc 288  Q
    ||||||||| |||||    
T  6222596 aaaccaattctaccc 6222582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 300
Target Start/End: Complemental strand, 13351760 - 13351535
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttac 173  Q
    ||||||||||||||||  ||  ||| |||||||||    ||||  ||||||||||||||||||||||        |||||||||||||||| | |   ||    
T  13351760 gggtctgtttggtaaggacagaaaaagagcttatagtgaatagtgaatagcttataagctcgtttgattaaaaaagttctgtttggtaatgtttttccac 13351661  T
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||| |||||| |||||||||||| |||||| || |||||||||||||||||||||| | || ||||||| || || ||||||||| |||| || |||    
T  13351660 cacgagtttataa-ctatttttcagacgctatttcaagtagcgtttgagcttatagcttcttattttttctttcaattttacccttattatttcatttaa 13351562  T
Q  274 aaaccaattttacccattataatttat 300  Q
    |  ||| ||||| | |||| |||||||    
T  13351561 attccatttttatctattacaatttat 13351535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 4453580 - 4453520
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  4453580 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 4453520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21865331 - 21865391
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  21865331 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 21865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26911595 - 26911655
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26911595 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 26911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 36999573 - 36999633
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  36999573 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 36999633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 38880839 - 38880779
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38880839 cacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 38880779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 40024999 - 40024939
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  40024999 cacgagcttataagctatttttcagaagctattccaagtagcctttgagcttatagcttat 40024939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 41877729 - 41877820
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaag 201  Q
    ||||||||| |||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41877729 cttatagcttatagcttataagttcgtttgacaaaaaaaactctgtttggtaatggtctcttaccacgagcttataaactatttttcagaag 41877820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 42132751 - 42132809
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42132751 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagctt 42132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 10393089 - 10393032
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  10393089 gagcttataagctatttttcagaagctattccaagtagcgtttgagtttatagcttat 10393032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 6232337 - 6232277
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  6232337 cacgagcttataagctatttttcagaagatatttcaagtagcgtttgagcttatagcttat 6232277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8070677 - 8070617
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  8070677 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagtttat 8070617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 9887076 - 9887136
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  9887076 cacgagcttataagctatttttcataagctatttcaagtagcgtttgagcttatagcttat 9887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 10839633 - 10839577
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  10839633 agcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 10839577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 23357041 - 23356908
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata-------gcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||||||||       |||| | ||||||| |||||||| ||||||||| ||||    
T  23357041 cacgagcttatatgctatttttcagaagctatttcaagtagcgtctgagcttatagcttttagctttttatcttttgttccatttttacccttattattt 23356942  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    || ||||||  ||| ||||||| |||| ||||||    
T  23356941 taactaaaagtcaaatttaccctttatcatttat 23356908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 34884894 - 34884989
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttcca-tttatacccttataatttta 268  Q
    ||||||||||||  ||||||||||||  |||||||| |||| |||| |||||||||||| |||| |||||||||| ||| ||||||||||||||||    
T  34884894 cacgagcttatagcctatttttcagactctattccaagtagtgtttcagcttatagcttctcattttttcttccattttttacccttataatttta 34884989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7213718 - 7213664
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7213718 cacgagcttataagctatttttcagaagctattccaagtagcgtttgtgcttata 7213664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 38842919 - 38842979
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  38842919 cacgagcttataaactatttttcagaagctatttcaagtagcgtttgaacttatagcttat 38842979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44275746 - 44275806
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||    
T  44275746 cacgagcttataatctatttttcagaagttattccaattagcgtttgagcttatagcttat 44275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 2221473 - 2221594
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||| |||||||||||||||| ||||||||| ||| ||||||       | |||||| |||||||| |||||||||  || ||||||||| ||||    
T  2221473 cacgagcttctaagctatttttcagacgctattccaagtaacgtttgaacttataacttataacttatcattttttcttcctattttacccttattattt 2221572  T
Q  267 tatctaaaaaccaattttaccc 288  Q
    ||||||||| ||| ||||||||    
T  2221573 tatctaaaatccatttttaccc 2221594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 9053187 - 9053128
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta 233  Q
    ||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||    
T  9053187 cacgagcttataaactattcttcagaagctatttcaagtagcgtttgagcttatagctta 9053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 15250191 - 15250316
Alignment:
Q  176 cgagcttataagctatttttcagaagctattccaggtagcgtttgagc-------ttatagcttatcatcttttcttccatttatacccttataatttta 268  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||       ||||||||| |||| |||| |||||||| ||||||||| ||||||    
T  15250191 cgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagtttatagcttgtcatgttttgttccatttctacccttatcatttta 15250290  T
Q  269 tctaaaaaccaattttacccattata 294  Q
      ||||| |||  ||||||| |||||    
T  15250291 attaaaacccacatttaccccttata 15250316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 2047371 - 2047318
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  2047371 ttataagctatttttcagaagttattctaagtagcgtttgagcttatagcttat 2047318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 2757312 - 2757389
Alignment:
Q  223 cttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||||| |||||||| ||||||| ||||| ||||||||| |||||||||||||  || || |||||||||||||||||    
T  2757312 cttataacttatcattttttctttcatttttacccttattattttatctaaaattcacttatacccattataatttat 2757389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 8340070 - 8340123
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  8340070 ttataagctatttttcaaaagctattccaagtagcgtttgagcttaaagcttat 8340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 10727914 - 10728045
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgag-------cttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||| |||||||||||||||||| || |||||||| ||||||||||||       |||||||||| |||  |||||||||| || ||||||||| ||||    
T  10727914 cacgaacttataagctatttttcaaaaactattccaagtagcgtttgagcttataacttatagcttctcactttttcttccaattttacccttattattt 10728013  T
Q  267 tatctaaaaaccaattttacccattataattt 298  Q
    ||| ||||  ||| ||||| |||||| |||||    
T  10728014 tatttaaattccatttttatccattacaattt 10728045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 598979 - 599035
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||||| ||||    
T  598979 agcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagtttat 599035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 7823604 - 7823544
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| | |||||| | || ||||||||||||||||||||||||    
T  7823604 cacgagcttataagctattttttataagctacttcaagtagcgtttgagcttatagcttat 7823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 7569825 - 7569908
Alignment:
Q  149 gttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    ||||||||||||||   | | |||||| ||||||||||||||||||||||||| ||||  | ||| ||||||||||||||||||    
T  7569825 gttctgtttggtaacacttttttaccatgagcttataagctatttttcagaagttattttaagtaacgtttgagcttatagctt 7569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 15250072 - 15250180
Alignment:
Q  77 tctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccac 176  Q
    ||||||||| |||||||  ||||||||||||| ||||||||  |||||||||||| |||||||||         |||||||| ||||||||| | |||||    
T  15250072 tctgtttggcaagatcaagaaatgagcttatagcttatagcagatagcttataagttcgtttgacaaaaaaaaatctgtttgataatggtctttcaccac 15250171  T
Q  177 gagcttata 185  Q
    |||||||||    
T  15250172 gagcttata 15250180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 23357155 - 23357050
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttac 173  Q
    ||||||||||||||||  || |||||||||||||| |||||||      |||||||||||||||||||       | | |||||||||||| ||||||||    
T  23357155 gggtctgtttggtaagcccattaaatgagcttatagcttatag------gcttataagctcgtttgacaaaaaaagctatgtttggtaatgctctcttac 23357062  T
Q  174 cacgagcttata 185  Q
    ||||||||||||    
T  23357061 cacgagcttata 23357050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 13527954 - 13527901
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  13527954 ttataagctatttttcagaagctatttcaagtaacgtttgaacttatagcttat 13527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 4055974 - 4056034
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||| ||||||||||||||  ||||||||  |||||||||| ||||||||||||    
T  4055974 cacgagcttattagctatttttcagacactattccaaatagcgtttgaacttatagcttat 4056034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 5520118 - 5520032
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagctta-------tagcttatcatcttttcttccatttataccctta 260  Q
    ||||||||||||||||||| |||||| ||  |||||||||||||||       ||||||||||| |||| |||||||||||||||||    
T  5520118 ttataagctatttttcagatgctattacaaatagcgtttgagcttatagcatatagcttatcatattttattccatttataccctta 5520032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 37674503 - 37674595
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||| ||| |||| ||| ||| ||||||||| |||||||||||| ||||||||| |||  |||||||||| || || |||||| ||||    
T  37674503 cacgagcttgtaaactatattttagacgctattccaagtagcgtttgagtttatagcttctcactttttcttccacttttatccttattattt 37674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 24019846 - 24019917
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagct----aatagcttataagctcgtttgac 141  Q
    ||||||||||||||||  ||||||||||||||||| |||||| ||     ||||||||||||||||||||||    
T  24019846 gggtctgtttggtaagcccactaaatgagcttatagcttataacttatatatagcttataagctcgtttgac 24019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 3337194 - 3337263
Alignment:
Q  217 tttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttac 286  Q
    |||||||||||||||||||||||||| || |||||  |||||||| | |||| |||||| ||| ||||||    
T  3337194 tttgagcttatagcttatcatcttttatttcattttcacccttatcactttaactaaaatccatttttac 3337263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 7511831 - 7511707
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattcca 209  Q
    ||||||||| |||||||||||||||||  |||       | ||||||| |||| | | | |||| | ||||||||||||||||||||| |||||| |       
T  7511831 cttatagctgatagcttataagctcgtcagacaaaaaaagctctgtttcgtaacgcttttttacaatgagcttataagctatttttcaaaagctacttag 7511732  T
Q  210 ggtagcgtttgagcttatagcttat 234  Q
     ||||| ||||||||||||||||||    
T  7511731 agtagcatttgagcttatagcttat 7511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 7516115 - 7515991
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattcca 209  Q
    ||||||||| |||||||||||||||||  |||       | ||||||| |||| | | | |||| | ||||||||||||||||||||| |||||| |       
T  7516115 cttatagctgatagcttataagctcgtcagacaaaaaaagctctgtttcgtaacgcttttttacaatgagcttataagctatttttcaaaagctacttag 7516016  T
Q  210 ggtagcgtttgagcttatagcttat 234  Q
     ||||| ||||||||||||||||||    
T  7516015 agtagcatttgagcttatagcttat 7515991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 6153626 - 6153558
Alignment:
Q  73 tgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||||||||||||| |||   ||| |||||| || ||  ||||| ||||||||||||||||||||||    
T  6153626 tgggtctgtttggtaacatccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 6153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 74 - 305
Target Start/End: Original strand, 39677349 - 39677580
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttac 173  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||       |||||||| |||||||       |||||||||||||||||||||||||    
T  39677349 gggtctgtttggtaagcccactaaatgagcttatagcttatagct-------tataagcttgtttgacaaaaaaagttctgtttggtaatggtctcttac 39677441  T
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||       ||||||||||||||||||||||||||||||||||||||||| ||||    
T  39677442 cacgagcttataagctatttttcaaaagctattccaagtagtgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattattt 39677541  T
Q  267 tatctaaaaaccaattttacccattataatttatcactc 305  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39677542 tatctaaaaaccaattttactcattataatttatcactc 39677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 13970061 - 13970181
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||  |||    
T  13970061 cacgagcttataagctatttttcagacgctattcgaagtagcgtttgagcttatagcttatcatattttcttccatttttacccttatcattttaattaa 13970160  T
Q  274 aaaccaattttacccattata 294  Q
    || ||| |||||||| |||||    
T  13970161 aacccacttttaccctttata 13970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 29189786 - 29189653
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat-------catcttttcttccatttatacccttataattt 266  Q
    |||||||||||| | ||||||| ||||||||||||| |||||||||||||||| |||||||       ||||||||||||||||| ||||||||| ||||    
T  29189786 cacgagcttatatgttatttttaagaagctattccaagtagcgtttgagcttacagcttatagcttctcatcttttcttccatttttacccttattattt 29189687  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||| ||||||||||||||||||||||||    
T  29189686 tatctaaaatccaattttacccattataatttat 29189653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 39746999 - 39746873
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || |||||||||| || |||||||||  ||||||||||    
T  39746999 cacgagcttataagctatttttcagatgctattccaagtagcgtttgagcttatagcttataattttttcttccaattttacccttattgttttatctaa 39746900  T
Q  274 aaaccaattttacccattataatttat 300  Q
    ||  |  |||||||| |||||||||||    
T  39746899 aattcttttttaccctttataatttat 39746873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 3427681 - 3427556
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||   |||||||||||| ||||||||  |||||||||||    
T  3427681 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttctcaatatttcttccatttttacccttaatattttatctaa 3427582  T
Q  274 aaaccaattttacccattataattta 299  Q
    ||  || ||||| || ||||||||||    
T  3427581 aattcatttttatcctttataattta 3427556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 298
Target Start/End: Complemental strand, 42203516 - 42203339
Alignment:
Q  121 tagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgtttg 220  Q
    |||||||||||||||||||||       | ||||||||||||   | | | |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  42203516 tagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccacgagcttataagctatttttcagaagctattctaagtagcgtttg 42203417  T
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattt 298  Q
    |||||||||||| |||  |||||||||| || ||||||||| |||| || ||||  ||| ||||| |||||| |||||    
T  42203416 agcttatagcttctcacattttcttccaattttacccttattatttcatttaaattccatttttatccattacaattt 42203339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 31688110 - 31688018
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  31688110 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31688018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 36112901 - 36112809
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  36112901 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 36112809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 1893901 - 1893809
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  1893901 cacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttctcactttttcttccaattttacccttattattt 1893809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 41313461 - 41313553
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  41313461 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 41313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 43276831 - 43276739
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  43276831 cacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttacccttattattt 43276739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 2855168 - 2855282
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||| || ||||| ||||| | |||||||   ||||| |||||    
T  2855168 cacgagcttataagctatttttcaaaagttatttcaagtagcgtttgagcttatagcttattattttttcctccatctttacccttgctattttctctaa 2855267  T
Q  274 aaaccaattttaccc 288  Q
    ||||||||| |||||    
T  2855268 aaaccaattctaccc 2855282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 2642478 - 2642418
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2642478 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2642418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 6338404 - 6338464
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6338404 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 6338464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 8270992 - 8271052
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8270992 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8271052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 10618892 - 10618952
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10618892 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 10618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 28716750 - 28716810
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28716750 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28716810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 31581780 - 31581840
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31581780 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31581840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36681507 - 36681447
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36681507 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36681447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 37560589 - 37560529
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37560589 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37560529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 39702392 - 39702452
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39702392 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 39702452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 41693966 - 41693906
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41693966 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41693906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 44827377 - 44827317
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44827377 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44827317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 45141515 - 45141455
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45141515 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45141455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 17081740 - 17081798
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17081740 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 17081798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 28709393 - 28709451
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28709393 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 28709451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 11741163 - 11741103
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  11741163 cacgagcttataagctatttttcagaatctattccaagtagcgtttgagcttatagcttat 11741103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 16422915 - 16422975
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  16422915 cacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 16422975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 17115624 - 17115684
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  17115624 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 17115684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 23676958 - 23677018
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23676958 cacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 23677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 25023392 - 25023452
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25023392 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 25023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 27781188 - 27781248
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27781188 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 27781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 31478162 - 31478222
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  31478162 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 31478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 32099623 - 32099723
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||  |||  ||||| || ||||||||| ||| || ||||    
T  32099623 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacccttattattctaactaa 32099722  T
Q  274 a 274  Q
    |    
T  32099723 a 32099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 32541309 - 32541369
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  32541309 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 32541369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 39871350 - 39871410
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  39871350 cacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 39871410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44157283 - 44157343
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44157283 cacgagcttataagctatttttgagaagctattccaagtagcgtttgagcttatagcttat 44157343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 9211072 - 9211159
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  9211072 cacgagcttataaactatttttcagaagctatcccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 9211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3511304 - 3511364
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  3511304 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttat 3511364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 22877985 - 22877925
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  22877985 cacgagcttataagctatttttcagaagctattctcagtagcgtttgagcttatagcttat 22877925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 35243412 - 35243352
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  35243412 cacgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagcttat 35243352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 36590223 - 36590282
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36590223 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagctt-tagcttat 36590282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 38171487 - 38171427
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  38171487 cacgagcttataagttgtttttcagaagctattccaagtagcgtttgagcttatagcttat 38171427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 39320126 - 39320066
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  39320126 cacgagcttataagctatttttcagaagctattccaagtagcgttcgagcttataacttat 39320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 40223143 - 40223084
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40223143 cacgagcttataa-ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 42142795 - 42142735
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  42142795 cacgagcttataagctatttttcagaagctattccaaatagtgtttgagcttatagcttat 42142735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 38780748 - 38780807
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  38780748 acgagcttataaactatttttcagacgctattccaagtagcgtttgagcttatagcttat 38780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 1363852 - 1363751
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttctt-ccatttatacccttataattttatcta 272  Q
    |||||| |||||||||||| |||||| ||||||| | ||||||||||| ||||||||||| ||| ||||||| |||||| || |||||| ||||||||||    
T  1363852 cacgagtttataagctattattcagacgctattctaagtagcgtttgaacttatagcttaacattttttctttccattt-tatccttattattttatcta 1363754  T
Q  273 aaa 275  Q
    |||    
T  1363753 aaa 1363751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 43849264 - 43849207
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  43849264 gagcttataagctatttttcagatgctattacaagtagcgtttgagcttatagcttat 43849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 44263396 - 44263453
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  44263396 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 44263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 9370376 - 9370316
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  9370376 cacgagcttataagctatttttcaaaagttatttcaagtagcgtttgagcttatagcttat 9370316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 11298101 - 11298041
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| |||||||||||||||||||||  || ||||||||||||||||||||    
T  11298101 cacgagcttataagatatttttcagaagctattccaaataacgtttgagcttatagcttat 11298041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 13888327 - 13888387
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  13888327 cacgagcttataaactatttttcagacgctattccaagtagcgtttaagcttatagcttat 13888387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 34395407 - 34395319
Alignment:
Q  174 cacgagcttataagctattttt-cagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||||| |||| |||| |  ||||| |||||||||    
T  34395407 cacgagcttataagctattttttcagaagctattcaaagtagcgtttgaacttatagcttctcattttttgtctcatttttacccttat 34395319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 37587778 - 37587707
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttctt 245  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| |||  |||||||    
T  37587778 cacgagcttataagttatttttcagaagttattccaagtagcgtttgagcttttagcttctcactttttctt 37587707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 44318243 - 44318371
Alignment:
Q  101 agcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaa 200  Q
    |||||||| ||||||||  |||| ||||||| |||||||||       |||  ||||| ||||| ||| | ||||||||||||||||||||||||||||     
T  44318243 agcttatagcttatagcggatagtttataagttcgtttgactaaaaaagttaagtttgataatgttctttgaccacgagcttataagctatttttcagac 44318342  T
Q  201 gctattccaggtagcgtttgagcttatag 229  Q
    | |||| || ||||| |||||||||||||    
T  44318343 gttatttcaagtagcatttgagcttatag 44318371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 7378937 - 7378994
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || |||| |||||||||||||||||||    
T  7378937 gagcttataagctatttttcagaagctacttcaagtagtgtttgagcttatagcttat 7378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 24652353 - 24652413
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||| |||||| |||||||||| || ||||| ||||||||||||||||||    
T  24652353 cacgagcttataagccattttttagaagctatttcaagtagcatttgagcttatagcttat 24652413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 29189906 - 29189855
Alignment:
Q  67 atatattgggtctgtttggtaagatcactaaatgagcttataccttatagct 118  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  29189906 atatatggggtctgtttggtaagctcactaaatgagcttatagcttatagct 29189855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 14171685 - 14171767
Alignment:
Q  211 gtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattat 293  Q
    ||||||||||||||||||||||||||| |||| ||| |||| || | |||| ||||||||||||| ||| ||| |||| ||||    
T  14171685 gtagcgtttgagcttatagcttatcattttttattctatttttatctttattattttatctaaaatccattttcaccctttat 14171767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 37801175 - 37801089
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaa 275  Q
    ||||||||| | |||||| || | || |||||| |||||| ||||||||||||| |||||||| ||||||||| |||||| ||||||    
T  37801175 tatttttcatacgctattacaagcagtgtttgaacttataacttatcatcttttattccatttctacccttattattttaactaaaa 37801089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 40045489 - 40045546
Alignment:
Q  178 agcttataagct-atttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||    
T  40045489 agcttataagcttatttttcagacgctatttcaagtagcgtttgagcttatagcttat 40045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 40551898 - 40551954
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  40551898 gagcttata-gctatttttcagaagctatttcagatagcgtttgagcttatagtttat 40551954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 2732390 - 2732313
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||| | |||| || || | |||||| |||||| ||||||||||||| |||||||| ||||||||| ||||    
T  2732390 tatttttcagacgttatttcaagtggtgtttgaacttatatcttatcatcttttattccatttttacccttattattt 2732313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 297
Target Start/End: Complemental strand, 8436581 - 8436454
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttga-------gcttatagcttatcatcttttcttccatttatacccttataattttat 269  Q
    ||||||||||| ||||||||||| |||||| ||  || |||||||       |||||||||||||||| |||| |||||||||||||||||  | ||||     
T  8436581 gagcttataagttatttttcagatgctattacaaatatcgtttgaacttatagcttatagcttatcatgttttattccatttatacccttaccactttaa 8436482  T
Q  270 ctaaaaaccaattttacccattataatt 297  Q
    |||||| |||  ||||||| | ||||||    
T  8436481 ctaaaacccatgtttacccttaataatt 8436454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 10651115 - 10651171
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||| |||||| |||  | |||||||||||| |||||||||||    
T  10651115 agcttataagctattttttagaagcaattttaagtagcgtttgagtttatagcttat 10651171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 22957399 - 22957455
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||||||||||| | |||| ||||||| |||||| ||||    
T  22957399 agcttataagttatttttcagaagctattctaagtagtgtttgagtttatagtttat 22957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 16831619 - 16831666
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||||||    
T  16831619 ttataagctatttttcataagctattttaagtagcgtttgagcttata 16831666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 45152131 - 45152194
Alignment:
Q  212 tagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaa 275  Q
    ||||||||||||||||| |||| ||  ||||||||||||| | ||||||  |||||||||||||    
T  45152131 tagcgtttgagcttataacttaccactttttcttccattttttcccttactattttatctaaaa 45152194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 2855063 - 2855104
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttata 115  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  2855063 gggtctgtttggtaagcacactaaatgagcttataacttata 2855104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 26293860 - 26293901
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgag 222  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  26293860 ttataagctatttttcagacactattccaagtagcgtttgag 26293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 26307117 - 26307158
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgag 222  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  26307117 ttataagctatttttcagacactattccaagtagcgtttgag 26307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 44262987 - 44263056
Alignment:
Q  72 ttgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||||||||||| |||   |||  |||||||| ||||||||| |||| |||||||||||| ||||    
T  44262987 ttgggtctgtttggtaacatccaaaaagaagcttatagcttatagctgatagtttataagctcgtctgac 44263056  T

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Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 40045366 - 40045426
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctc 134  Q
    ||||||||||||||||| ||  |||||||||||||  | ||| || |||||||||||||||    
T  40045366 gggtctgtttggtaagaccagaaaatgagcttatagttcataacttatagcttataagctc 40045426  T

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Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 112)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 177 - 305
Target Start/End: Original strand, 20511495 - 20511623
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  20511495 gagcttataagctatttttcagacgctattccaagtagcgtttgagcttataacttatcatcttttcttccatttatacccttattattttatctaaaaa 20511594  T
Q  277 ccaattttacccattataatttatcactc 305  Q
    ||||||||| |||||||||||||||||||    
T  20511595 ccaattttatccattataatttatcactc 20511623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 174 - 305
Target Start/End: Original strand, 36196957 - 36197088
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36196957 cacgagcttataaactatttttcagaagctattctaagtagtgtttgagcttatagcttatcatcttttcttccatttatacccttattattttatctaa 36197056  T
Q  274 aaaccaattttacccattataatttatcactc 305  Q
    |||||||||||| |||||||||||||||||||    
T  36197057 aaaccaattttatccattataatttatcactc 36197088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 21633877 - 21633739
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat-------catcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||    
T  21633877 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattattt 21633778  T
Q  267 tatctaaaaaccaattttacccattataatttatcactc 305  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21633777 tatctaaaaaccaattttacccattataatttatcactc 21633739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 110 - 300
Target Start/End: Original strand, 17715583 - 17715773
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattcca 209  Q
    ||||||||| ||||||||||||||||||||||       | |||||||||||||||| | | |||||||||||||||||||||||||||| |||||||||    
T  17715583 cttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttataagctatttttcagacgctattcca 17715682  T
Q  210 ggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
     |||||||||||| |||||||||||  | |||||||||| || | ||||||  | ||||||||||| ||  |||||||| |||||||||||    
T  17715683 agtagcgtttgagattatagcttattgttttttcttccacttttgcccttactaatttatctaaaatccccttttaccctttataatttat 17715773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 41864140 - 41864015
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    |||| |||||||||||||||| |||||||||||||  |||||||| || ||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  41864140 acgaacttataagctatttttaagaagctattccaaatagcgtttaagtttatagcttctcatcttttcttccatttttacccttattattttatctaaa 41864041  T
Q  275 aaccaattttacccattataatttat 300  Q
    | ||||||||||||||||||||||||    
T  41864040 atccaattttacccattataatttat 41864015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 11050400 - 11050526
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||   || ||||||||| ||||||||  |||||||||||    
T  11050400 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcaaaattccttccatttttacccttaatattttatctaa 11050499  T
Q  274 aaaccaattttacccattataatttat 300  Q
    || ||| ||||| || |||||||||||    
T  11050500 aatccatttttatcctttataatttat 11050526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 4465532 - 4465406
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||  | ||||||||| ||||||  |||    
T  4465532 cacgagcttataaactatttttcagacgctgttccaagtagcgtttgagcttgtagcttatcatcttttcttccacctttacccttattattttaaataa 4465433  T
Q  274 aaaccaattttacccattataatttat 300  Q
    || |||  ||||||| |||||||||||    
T  4465432 aacccatatttaccctttataatttat 4465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 20148863 - 20148749
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||| | |||||||   ||||| |||||    
T  20148863 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttatcattttttcttccatctttacccttgctattttctctaa 20148764  T
Q  274 aaaccaattttaccc 288  Q
    || |||||| |||||    
T  20148763 aacccaattctaccc 20148749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 37115344 - 37115252
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  37115344 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 37115252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 55495941 - 55495849
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  55495941 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 55495849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 24954284 - 24954155
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc-------ttatcatcttttcttccatttatacccttataat 264  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||       |||||||||||| |||||||| ||||||||| ||    
T  24954284 accacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatagcttatcatcttttgttccatttttacccttatcat 24954185  T
Q  265 tttatctaaaaaccaattttacccattata 294  Q
    ||||  ||||| ||| |||||||| |||||    
T  24954184 tttaattaaaacccacttttaccctttata 24954155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 37832005 - 37832130
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| || |||  |||||||||| || ||||||||| |||| ||||||    
T  37832005 cacgagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagtttctcactttttcttccactt-tacccttattatttcatctaa 37832103  T
Q  274 aaaccaattttacccattataatttat 300  Q
    |  ||| ||||||||| || |||||||    
T  37832104 attccatttttacccactacaatttat 37832130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 266
Target Start/End: Complemental strand, 45780892 - 45780726
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcaga 199  Q
    |||||| || ||| ||||| ||||||||||||||||||||||       | ||| ||||||||   | | | |||| |||||||||||||||||||||||    
T  45780892 gagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttataagctatttttcaga 45780793  T
Q  200 agctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||| |||||||||||||||||||||| |||  ||||||| || || ||||||||| ||||    
T  45780792 agctattccaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 45780726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 29664016 - 29664104
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||| || ||||||||| ||||    
T  29664016 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttctcactttttcatccaattttacccttattattt 29664104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 31679052 - 31679144
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  31679052 cacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31679144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 37047115 - 37047239
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    |||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||| ||||||||||||| || ||||||   |||||||||||     
T  37047115 gagcttataagctatttttcagaagctacttcaaatagcgtttgagcttatagcttatcatattttcttccatttttatccttattgatttatctaaaac 37047214  T
Q  277 ccaatttta-cccattataatttat 300  Q
    ||| || || ||| |||||||||||    
T  37047215 ccatttctacccctttataatttat 37047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 42085783 - 42085659
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||||||| ||||||| || || ||||||||  ||||  |||||    
T  42085783 cacgagcttataagctttttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttctttcaattttacccttaatatttattctaa 42085684  T
Q  274 aaaccaattttacccattataattt 298  Q
    ||  || |||||||| |||||||||    
T  42085683 aattcagttttaccctttataattt 42085659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 43225738 - 43225646
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  43225738 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 43225646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 8716964 - 8716853
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttaccc 288  Q
    |||||| |||| |||||| || |||| |||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||  || ||||||||    
T  8716964 tattttccagaggctatttcaagtagtgtttgagcttatagtttatcattttttcttccatttctacccttattattttatctaaaattcatttttaccc 8716865  T
Q  289 attataatttat 300  Q
    |||| |||||||    
T  8716864 attacaatttat 8716853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 42124804 - 42124680
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattcca 209  Q
    |||||||| |||||||||||||||||||||||       | | |||||||||||| | | | ||||||||||||||| |||| ||||||| |||||||||    
T  42124804 cttatagcgaatagcttataagctcgtttgaccaaaaaagctatgtttggtaatgttttttcaccacgagcttataaactatctttcagacgctattcca 42124705  T
Q  210 ggtagcgtttgagcttatagcttat 234  Q
     ||||||||||||||||||||||||    
T  42124704 agtagcgtttgagcttatagcttat 42124680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 48056667 - 48056585
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacc 256  Q
    ||||| |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||    
T  48056667 cacgaacttataagttatttttcagacgctattccaagtagcgtttgagcttatagcttatcatcttttattccatttttacc 48056585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 3932256 - 3932179
Alignment:
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattt 298  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3932256 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttacccattataattt 3932179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 35777447 - 35777362
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttataccctt 259  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||  |||||||||| || |||||||    
T  35777447 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataccttctcactttttcttccaattttaccctt 35777362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 52713583 - 52713710
Alignment:
Q  180 cttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat-------catcttttcttccatttatacccttataattttatcta 272  Q
    |||||||| ||||||| |||  |||||| | ||||||||||||||||||||||||       ||||||||||||||||| ||||||||| ||||||||||    
T  52713583 cttataagttatttttaagacactattctaagtagcgtttgagcttatagcttataacttctcatcttttcttccatttttacccttattattttatcta 52713682  T
Q  273 aaaaccaattttacccattataatttat 300  Q
    |||  ||| |||||||||||||||||||    
T  52713683 aaattcaactttacccattataatttat 52713710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3009794 - 3009854
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3009794 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 4517252 - 4517192
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4517252 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 4939447 - 4939387
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4939447 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4939387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 5465471 - 5465411
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5465471 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5465411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 7706455 - 7706515
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7706455 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 7706515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8829876 - 8829816
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8829876 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 11152000 - 11151940
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11152000 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 11151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 12234028 - 12233968
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12234028 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 18582927 - 18582987
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18582927 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 18582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21369963 - 21370023
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21369963 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21370023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22892611 - 22892671
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22892611 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 22892671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22944275 - 22944335
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22944275 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 22944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 25440545 - 25440485
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25440545 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 25440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26826604 - 26826664
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26826604 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 26826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 27185693 - 27185633
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27185693 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27185633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 28307338 - 28307398
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28307338 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28307398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 29413614 - 29413674
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29413614 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 33005169 - 33005077
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  33005169 cacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttacccttattattt 33005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 45906222 - 45906282
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45906222 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45906282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 46895366 - 46895426
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46895366 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 46895426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 52670077 - 52670137
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52670077 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 52670137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 53407272 - 53407332
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53407272 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 53407332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 55358399 - 55358339
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55358399 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 55358339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 55764642 - 55764702
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55764642 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 55764702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 8941988 - 8942047
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8941988 acgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 40497457 - 40497370
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  40497457 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 40497370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 55829087 - 55829174
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  55829087 cacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 55829174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 21633996 - 21633886
Alignment:
Q  75 ggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttacc 174  Q
    |||||||||||||||   |||||||||| ||||| ||||||||| |||||||||||| |||||||||       ||| |||||||||||| |||||||||    
T  21633996 ggtctgtttggtaagcctactaaatgagtttatagcttatagcttatagcttataagttcgtttgacaaaaaaagttttgtttggtaatgttctcttacc 21633897  T
Q  175 acgagcttata 185  Q
    |||||||||||    
T  21633896 acgagcttata 21633886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 30562901 - 30562824
Alignment:
Q  183 ataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttataccctta 260  Q
    ||||||||||||||||| |||||| || ||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  30562901 ataagctatttttcagatgctattacaagtagcgtttaagcttatagcttatcatgttttattccatttataccctta 30562824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 37970380 - 37970437
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37970380 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 9032056 - 9031996
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  9032056 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 9031996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 9043671 - 9043611
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9043671 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 9043611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 11600770 - 11600826
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11600770 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 11600826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 19513943 - 19513883
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19513943 cacgagcttataagctatttttcagaagctattccaagtagcgttttagcttatagcttat 19513883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22430718 - 22430778
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22430718 cacgagcttataagctatttttcagatgctattccaagtagcgtttgagcttatagcttat 22430778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 23867930 - 23867870
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23867930 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 23867870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 27397827 - 27397767
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  27397827 cacgagcttataagctatttttcataagctattccaagtagcgtttgagcttatagcttat 27397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 35822360 - 35822300
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35822360 cacgagattataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 42116979 - 42117039
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42116979 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 42117039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 51011122 - 51011066
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51011122 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 51011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 55856588 - 55856528
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  55856588 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 55856528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 56372518 - 56372578
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  56372518 cacgagcttataagctatttttcagaagctattccaagcagcgtttgagcttatagcttat 56372578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 32101796 - 32101709
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    ||||||||||||| |||||| | ||| | ||||||| |||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  32101796 cacgagcttataaactatttctaagacgttattccaagtagcgtttgagcttatagcttattatcttttcttccaattttacccttat 32101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 4355653 - 4355593
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  4355653 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 4355593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 26443286 - 26443447
Alignment:
Q  72 ttgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctctt 171  Q
    ||||||||||||||||| |||   ||| ||||||||| ||||||||  |||||||||||||||||||||         ||||||||||||| | | | ||    
T  26443286 ttgggtctgtttggtaacatccaaaaaagagcttatagcttatagcagatagcttataagctcgtttgataaaaaaaattctgtttggtaacgctttttt 26443385  T
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta 233  Q
    || |||||||||||| |||||||||| |||||| | || ||| ||||| |||||||| ||||    
T  26443386 acaacgagcttataaactatttttcaaaagctacttcaagtaacgtttaagcttataactta 26443447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 30366207 - 30366147
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  30366207 cacgagcttataaactatttttcagaagctattctaagtagcgtttgagcttatagcttat 30366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 31338561 - 31338501
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31338561 cacgggcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 31338501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 33115058 - 33115118
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  33115058 cacgagcttataagctatttttcagaagctatttcaagtatcgtttgagcttatagcttat 33115118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 39087619 - 39087559
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  39087619 cacgagtttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 39087559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 44525720 - 44525820
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||  |||  ||||| || ||||||||| ||| || ||||    
T  44525720 cacgagcttataagctatttttcagaaactatttcaagtagcgtttgagcttatagcttctcacttttaattccaattttacccttattattctaactaa 44525819  T
Q  274 a 274  Q
    |    
T  44525820 a 44525820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 47417536 - 47417444
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||| ||||| ||||||||||| | |||||||||||||||| ||| |||  |||||||||| || ||||||||| ||||    
T  47417536 cacgagcttataagctatctttcataagctattccaagcagcgtttgagcttataacttctcactttttcttccaattttacccttattattt 47417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 56270152 - 56270092
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  56270152 cacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttttagcttat 56270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 23113537 - 23113404
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgag-------cttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||       |||||| ||| |||| |||| | |||||| ||||||||| ||||    
T  23113537 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagtttataacttataacttctcatattttatcccatttttacccttattattt 23113438  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||  ||||| |||  ||||||| |||||||||||    
T  23113437 taattaaaatccatatttaccctttataatttat 23113404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 31435089 - 31435176
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||| ||||||| ||||||||| | ||||||||| |||||||||||| ||||| ||||||||||||| |||||||| |||| ||||    
T  31435089 cacgagtttataagttatttttcatacgctattccaagtagcgtttgaggttataacttatcatcttttattccatttttacctttat 31435176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 35581006 - 35580919
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    ||||||||||||| |||||||||||| |||||| || |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  35581006 cacgagcttataaactatttttcagaggctatttcaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 35580919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 22038416 - 22038358
Alignment:
Q  176 cgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22038416 cgagcttataggctatttttcagaagctattccaagtaacgtttgagcttatagcttat 22038358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 35468098 - 35468152
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  35468098 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttata 35468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 53224310 - 53224368
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  53224310 cacgagtttataagctatttttcaaaagctattccaagtagcgtttgagcttatagctt 53224368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 4391766 - 4391709
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  4391766 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 4391709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 15636025 - 15636156
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||       |||||||||||| |||  |||||||||| || ||||||||| ||||    
T  15636025 cacgagcttataaactatttttcagaagctattccaagtagcgtttgattttatagcttatagcttctcactttttcttccaattttacccttattattt 15636124  T
Q  267 tatctaaaaaccaattttacccattataattt 298  Q
     || ||||  ||| ||||| |||||| |||||    
T  15636125 catttaaattccatttttatccattacaattt 15636156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 23162684 - 23162745
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-agcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  23162684 cacgagcttataagctatttttcagaagctattccaagtagcttttgaagcttatagcttat 23162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 25235231 - 25235288
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  25235231 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 25235288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 35190674 - 35190617
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  35190674 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 35190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 50502323 - 50502416
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttt 267  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||||||| | |||| |   ||||||||| || ||||||||| |||||    
T  50502323 cacgagcttataagctatttttcagacgctattccaagtagtgtttgagcttatggattattaatatttcttccacttctacccttattatttt 50502416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 55684781 - 55684838
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  55684781 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 55684838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 4392786 - 4392727
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  4392786 cacgagcttataagctatttt-cataagctattccaagtagcgtttgagcttatagcttat 4392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 36008075 - 36008019
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  36008075 agcttataagctgtttttcagaagctattccaagtagcgtttgagtttatagcttat 36008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 36196834 - 36196904
Alignment:
Q  71 attgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||||||||||||||||  || ||||||||||||||  |||||||| |||| |||||||||||||||||    
T  36196834 attgggtctgtttggtaagcccattaaatgagcttatagtttatagcttatagtttataagctcgtttgac 36196904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 40119901 - 40120005
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataat 264  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||       ||||||||||||| |||||||||| || ||||||||  ||    
T  40119901 accacgagcttataaactatttttcagacgctattccaagtagcatttgagcttgtagcctatagcttatcatattttcttccacttttacccttactat 40120000  T
Q  265 tttat 269  Q
    |||||    
T  40120001 tttat 40120005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 43078257 - 43078197
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||| |||||| || ||||| ||||||||||||||||||    
T  43078257 cacgagcttataaactatttttcagacgctatttcaagtagcatttgagcttatagcttat 43078197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44442165 - 44442224
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| || ||||||||||||||||||| || ||||||||||||||||||||||||    
T  44442165 cacgagcttaaaa-ctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 44442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 31953245 - 31953364
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaa 280  Q
    |||||| |||||||| |||   |||| || |||||||||||||||||||||| |||  |||||||||| || |||| |||| |||| || ||||  |||     
T  31953245 ttataaactattttttagacattatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacctttattatttcatttaaattccat 31953344  T
Q  281 ttttacccattataatttat 300  Q
    ||||| |||||| |||||||    
T  31953345 ttttatccattacaatttat 31953364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 38048938 - 38048875
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcat 237  Q
    |||||| |||||| |||||||||||| |||||||||  |||| |||||| ||||||||||||||    
T  38048938 cacgagtttataaactatttttcagacgctattccaaatagcatttgagtttatagcttatcat 38048875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 53273201 - 53273236
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattcca 209  Q
    ||||||||||||||||||||||||||||||||||||    
T  53273201 cacgagcttataagctatttttcagaagctattcca 53273236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 31011004 - 31011098
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttta 268  Q
    |||||||||||||||||| ||| | || |||||| |  || ||||| |||||||| ||| |||| ||||||||||| | ||||||||| ||||||    
T  31011004 cacgagcttataagctatattttaaaatctattctaaatatcgtttaagcttataacttctcattttttcttccatatttacccttatcatttta 31011098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 44375800 - 44375726
Alignment:
Q  211 gtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaatttta 285  Q
    |||||| |||| |||||| ||| | ||||||||||||| ||||| |||||| ||||||||||||| ||| |||||    
T  44375800 gtagcgcttgaacttataacttgttatcttttcttccaattatatccttatcattttatctaaaatccattttta 44375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 30623391 - 30623322
Alignment:
Q  219 tgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttaccc 288  Q
    |||||||||| |||||||| ||||||||||| | |||| ||   |||||||||||||||||||| |||||    
T  30623391 tgagcttataacttatcattttttcttccatctttaccattgctattttatctaaaaaccaattctaccc 30623322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 41864248 - 41864207
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttata 115  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  41864248 gggtctgtttggtaagctcactaaatgagcttataacttata 41864207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 1031388 - 1031495
Alignment:
Q  192 ttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccatt 291  Q
    |||||||| |||||| ||| ||  ||||||||||| ||||||||||||||||| | |||| |||||  || ||||||||| ||| ||| | ||| || ||    
T  1031388 ttttcagacgctatttcagatattgtttgagcttacagcttatcatcttttctacaatttttaccc-cattattttatcttaaatccattgttatccttt 1031486  T
Q  292 ataatttat 300  Q
    |||||||||    
T  1031487 ataatttat 1031495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 35842645 - 35842610
Alignment:
Q  199 aagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35842645 aagctattccaagtagcgtttgagcttatagcttat 35842610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 49239299 - 49239220
Alignment:
Q  155 tttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| | | ||||| ||||||||| |||||||||||| ||||||  | ||| ||||||| ||||||| ||||    
T  49239299 tttggtaatggtttttcaccacaagcttataaactatttttcagacgctattataagtaacgtttgaacttatagtttat 49239220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 30623418 - 30623376
Alignment:
Q  72 ttgggtctgtttggtaagatcactaaatgagcttataccttat 114  Q
    ||||||||||||||||||  ||||||||||||||||| |||||    
T  30623418 ttgggtctgtttggtaagcccactaaatgagcttataacttat 30623376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 37337728 - 37337782
Alignment:
Q  180 cttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||| |||||| | || ||||||||||| ||||||| ||||    
T  37337728 cttataagctatttttcataagctacttcaagtagcgtttgaacttatagtttat 37337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 20511386 - 20511427
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttata 115  Q
    |||||||||||||||| || ||||||||||||||| ||||||    
T  20511386 gggtctgtttggtaaggtccctaaatgagcttatagcttata 20511427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 36486443 - 36486386
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| |||||||||| ||||||||  | ||| ||||||| ||||||||||||    
T  36486443 gagcttataaactatttttcataagctattttaagtaacgtttgaacttatagcttat 36486386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 45906129 - 45906169
Alignment:
Q  101 agcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  45906129 agcttttaccttttagcttatagcttataagctcgtttgac 45906169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 52708006 - 52707930
Alignment:
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatt 297  Q
    |||||||| |||||||| |||| |||||||||||||||||  | |||| |||||| |||  ||||||| | ||||||    
T  52708006 agcttatatcttatcatgttttattccatttatacccttaccactttaactaaaacccatgtttacccttaataatt 52707930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 52708059 - 52708000
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||| | |||| || ||| || |||||||||||||||||    
T  52708059 cacgagcttataaactatttttcagatgttattacaagtaacg-ttgagcttatagcttat 52708000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 80)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 11100813 - 11100687
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||| ||||    
T  11100813 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatcattttttcttccatctttacccttattattttaactaa 11100714  T
Q  274 aaaccaattttacccattataatttat 300  Q
    || |||  ||||||| |||||||||||    
T  11100713 aacccatatttaccctttataatttat 11100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 648617 - 648742
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||||||  |||||||||||    
T  648617 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcaaaatttcttccatttttacccttaatattttatctaa 648716  T
Q  274 aaaccaattttacccattataattta 299  Q
    || ||| ||||| || ||||||||||    
T  648717 aatccatttttatcctttataattta 648742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 16474857 - 16474978
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  16474857 cacgagattataagctattttttagaagctattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattattt 16474956  T
Q  267 tatctaaaaaccaattttaccc 288  Q
    ||||||||||||| || |||||    
T  16474957 tatctaaaaaccatttataccc 16474978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 7896597 - 7896722
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatct 271  Q
    ||||||||||||||||||||||| || | |||||| ||  ||||||||||| ||||||||||| ||||||||||| |||| ||||||||| |||||||||    
T  7896597 accacgagcttataagctatttt-caaacgctatttcaaatagcgtttgagtttatagcttataatcttttcttctatttttacccttattattttatct 7896695  T
Q  272 aaaaaccaattttacccattataattt 298  Q
    ||||  |||||||||| ||||||||||    
T  7896696 aaaattcaattttacctattataattt 7896722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 4221524 - 4221432
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  4221524 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 4221432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 4657672 - 4657592
Alignment:
Q  154 gtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||    
T  4657672 gtttggtaatggtctcttaccacgagcttataagctatttttcagaaactatttcaagtagagtttgagcttatagcttat 4657592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 3669630 - 3669751
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||  |||||||||| || ||||||||| |||| || ||||      
T  3669630 gagcttataagctatttttcagaagctattcaaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattatttcatttaaatt 3669729  T
Q  277 ccaattttacccattataattt 298  Q
    ||| || || ||||||||||||    
T  3669730 ccatttctatccattataattt 3669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 9587237 - 9587145
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||| ||||| || ||||||||| ||||    
T  9587237 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttattccaattttacccttattattt 9587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 39246888 - 39246796
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||| ||||| ||||    
T  39246888 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacacttattattt 39246796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 1174870 - 1174930
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1174870 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 2236567 - 2236507
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2236567 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2236507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3670364 - 3670424
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3670364 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 5381992 - 5381862
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta-------tcatcttttcttccatttatacccttataattttat 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||  |||||||||| || ||||||||| |||| ||    
T  5381992 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatagcttctcactttttcttccacttttacccttattatttcat 5381893  T
Q  270 ctaaaaaccaattttacccattataatttat 300  Q
    |||||  ||| ||||||||| || |||||||    
T  5381892 ctaaattccatttttacccactacaatttat 5381862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 5997945 - 5997885
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5997945 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5997885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8024035 - 8023975
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8024035 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8023975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 9160743 - 9160683
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9160743 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 9160683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 12363663 - 12363603
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12363663 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 12774662 - 12774722
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12774662 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12774722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 13156937 - 13156845
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  13156937 cacgagtttataagctatttttcagaagctattccaagtagcttttgagcttatagcttctcactttttcttccaattttacccttattattt 13156845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 13228524 - 13228464
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13228524 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 13228464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 14647408 - 14647348
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14647408 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 14647348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 19347792 - 19347852
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19347792 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19347852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 24794058 - 24794118
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24794058 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24794118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 27130419 - 27130479
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27130419 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 30299784 - 30299844
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30299784 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 30412663 - 30412603
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30412663 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 31169038 - 31168978
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31169038 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 32381725 - 32381665
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32381725 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32381665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 32382935 - 32382995
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32382935 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 35235778 - 35235718
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35235778 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35235718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 35236718 - 35236658
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35236718 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35236658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 35640026 - 35640086
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35640026 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 36685902 - 36685962
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36685902 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36685962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 39744593 - 39744533
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39744593 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 39744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 30774243 - 30774185
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30774243 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 30774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 1711250 - 1711194
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1711250 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1711194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2178846 - 2178906
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2178846 cacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2178906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 2671504 - 2671592
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||   ||||||| || || ||||||||| ||||    
T  2671504 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcgctttttctttcaattttacccttattattt 2671592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 3037476 - 3037416
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  3037476 cacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 3037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5591674 - 5591734
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5591674 cacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5591734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 6603961 - 6603901
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  6603961 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 6603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 10697355 - 10697415
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  10697355 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 10697415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 12713398 - 12713458
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12713398 cacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 12713458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15530521 - 15530581
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15530521 cacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 15530581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 19525835 - 19525895
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19525835 cacgagcttataagctatttttcagaagctattccaagcagcgtttgagcttatagcttat 19525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 29392158 - 29392066
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  29392158 cacgagcttataagctattttttaaaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 29392066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 39275509 - 39275569
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  39275509 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 39275569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 13936281 - 13936372
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttta 268  Q
    ||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||  |||| |||||||  ||||||||| ||||||    
T  13936281 gagcttataagctatttttcagacgctatttcaagtagcatttgagcttatagcttatcactttttattccattattacccttattatttta 13936372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 298
Target Start/End: Complemental strand, 25872339 - 25872155
Alignment:
Q  114 tagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggta 213  Q
    ||||| ||||||||||||||| ||||||       | ||||||||||||   | | | |||| || |||||||  ||||||||||||||||||||| |||    
T  25872339 tagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacactttttcaccatgaacttataatttatttttcagaagctattccaagta 25872240  T
Q  214 gcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattt 298  Q
    | ||||||||||||||||| ||| ||||||||| | || ||||||||| |||| || ||||  ||| ||||| |||||| |||||    
T  25872239 gagtttgagcttatagcttctcaccttttcttctaattttacccttattatttcatttaaattccatttttatccattacaattt 25872155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 13921811 - 13921936
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||| ||||||||||||||| |||||| || ||||||||||| |||||| |||||||| |||||||| | || || ||||||  ||||||||||    
T  13921811 cacgagcttaaaagctatttttcagacgctatttcaagtagcgtttgaacttataacttatcattttttcttctaattttatccttattgttttatctaa 13921910  T
Q  274 aaaccaattttacccattataatttat 300  Q
    ||  |  |||||||| |||||||||||    
T  13921911 aattc-tttttaccctttataatttat 13921936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 11062955 - 11062898
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11062955 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagtttat 11062898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 26699154 - 26699097
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26699154 gagcttataagctatttttcagaggctattccaagtagcgtttgagcttatagcttat 26699097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 26968887 - 26968830
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26968887 gagcttataagctatttttcagaggctattccaagtagcgtttgagcttatagcttat 26968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 4379344 - 4379404
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  4379344 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 4379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5521384 - 5521444
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  5521384 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagtttatagcttat 5521444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 6349422 - 6349486
Alignment:
Q  170 ttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  6349422 ttaccacgagcttataaactatttttcagacgctattctaagtagcgtttgagcttatagcttat 6349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 11663942 - 11663882
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  11663942 cacgagcttataagttatttttcagaagctattctaagtagcgtttgagcttatagcttat 11663882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15443542 - 15443602
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  15443542 cacgagcttataaactatttttcagaagctattccaaatagcgtttgagcttatagcttat 15443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 19956358 - 19956299
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19956358 cacgagcttataagctatttt-cagaagctattccaagtagcgtttgagcttatagcttat 19956299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 22977253 - 22977123
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta-------tcatcttttcttccatttatacccttataattttat 269  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||       |||  |||||||||| || ||||||||| |||| ||    
T  22977253 gagcttataaactatttttcataagctattccaagtagcgtttgagcttatagcttatagcttctcactttttcttccacttttacccttattatttcat 22977154  T
Q  270 ctaaaaaccaattttacccattataatttat 300  Q
    |||||  ||| ||||||||| || |||||||    
T  22977153 ctaaattccatttttacccactacaatttat 22977123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 43402530 - 43402590
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  43402530 cacgagcttataagctatttttcaaaagctatttcaagtagcgtttgagcttatagcttat 43402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 36028041 - 36027982
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  36028041 acgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 36027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 2497649 - 2497743
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttta 268  Q
    |||||||||||||| ||||||||| ||||||||| |  ||||||||||||||||| ||||||||||||| ||  |||| |||| |||| ||||||    
T  2497649 cacgagcttataagttatttttcaaaagctattctaaatagcgtttgagcttataacttatcatcttttattaaatttttaccgttattatttta 2497743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 274
Target Start/End: Complemental strand, 6893430 - 6893330
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |||| |||  ||| | || ||||||||| ||| || ||||    
T  6893430 cacgagcttataaactagttttcagaagttattccaagtagcgtttgagcttatagcttctcatttttaattctagttttacccttattattctagctaa 6893331  T
Q  274 a 274  Q
    |    
T  6893330 a 6893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 7651726 - 7651786
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||    
T  7651726 cacgagcttataatctatttttcagaagctatttcaagtagtgtttgagcttatagcttat 7651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 16474773 - 16474848
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttata 185  Q
    ||||||||| ||||||||||| ||||||||||       | |||||||||||||||||||||||||||||||||||    
T  16474773 cttatagcttatagcttataaactcgtttgacaaaaatagctctgtttggtaatggtctcttaccacgagcttata 16474848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 9627201 - 9627145
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||||| |||||    
T  9627201 agcttataagctatttttcagaagctacttcaagtagcgtttgagcttataacttat 9627145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 42323657 - 42323598
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| ||||||||||||||||||| ||||||| | |||| |||||||||||||||||||    
T  42323657 acgagtttataagctatttttcagacgctattctaagtagtgtttgagcttatagcttat 42323598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 13936129 - 13936199
Alignment:
Q  71 attgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||| |||||||||||||  ||  |||| |||||||||||||||||  ||||||||||||||||||||||    
T  13936129 attggctctgtttggtaagggcagaaaattagcttataccttatagcggatagcttataagctcgtttgac 13936199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 4875737 - 4875790
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||| | ||||||||| | ||||||||||||||||||||||||    
T  4875737 ttataagctattttttaaaagctattcaaagtagcgtttgagcttatagcttat 4875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 23920543 - 23920595
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagctta 226  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||| ||||    
T  23920543 cacgagcttataagctatttttcagacgctattccaagtagtgtttgaactta 23920595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 7157500 - 7157416
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttataccctt 259  Q
    |||||||||||| ||| ||||| |||||||||| ||  |||| ||| | |||||||||| |||  |||||||||||||||||||||    
T  7157500 cacgagcttata-gctttttttgagaagctatttcaaatagcttttaaacttatagcttttcacattttcttccatttataccctt 7157416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 31408008 - 31408127
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagct------tatagcttatcatcttttcttccatttatacccttataatttt 267  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| || |      |||||||||| || |||||||||| |  ||||||||| | |||    
T  31408008 cacgagcttataagctatttgtcagacgctattccaattagcgtttaagattataactatagcttattat-ttttcttccaatactacccttattacttt 31408106  T
Q  268 atctaaaaaccaattttaccc 288  Q
    |||||||| ||| ||||||||    
T  31408107 atctaaaatccagttttaccc 31408127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 19347674 - 19347737
Alignment:
Q  76 gtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttga 140  Q
    |||||||||||||| |  ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  19347674 gtctgtttggtaaggttcctaaatgagctta-agcttatagcttttagcttataagctcgtttga 19347737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 8638277 - 8638214
Alignment:
Q  212 tagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaa 275  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||| ||||  |||| ||||||||    
T  8638277 tagcgtttgaacttatagcttatcattttttctttcatttttactcttaatatttgatctaaaa 8638214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 1711348 - 1711307
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  1711348 gagcttttagcttatagcttatagcttataagctcgtttgac 1711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 9587332 - 9587291
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  9587332 gagcttttagcttatagcttatagcttataagctcgtttgac 9587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 41826388 - 41826429
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  41826388 gagcttatagcttatagttgatagcttataagctcgtttgac 41826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 4379230 - 4379290
Alignment:
Q  81 tttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||||||  ||||||||||||||||| | ||||| | ||||||||| || |||||||||    
T  4379230 tttggtaagcccactaaatgagcttatagcatatagtttatagcttattagttcgtttgac 4379290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 41471945 - 41471885
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccat 249  Q
    |||||| |||| |||||| ||  ||| ||||||||||||||||||| || |||||||||||    
T  41471945 tattttccagacgctatttcaaatagtgtttgagcttatagcttattattttttcttccat 41471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 39719440 - 39719566
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||| |||| |  |||||||||||||  ||||||||||| ||||||||| | |||||||||||||||| ||||||||| |||||||||||    
T  39719440 cacgagcttataagttattatgaagaagctattccaaatagcgtttgagtttatagctttttatcttttcttccatttttacccttattattttatctaa 39719539  T
Q  274 aaaccaattttacccattataatttat 300  Q
    || ||||||||||||||||||||||||    
T  39719540 aatccaattttacccattataatttat 39719566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 42217750 - 42217876
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||| |  ||||| ||||||||| ||||||  |||    
T  42217750 cacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcatattttatctcatttttacccttattattttaattaa 42217849  T
Q  274 aaaccaattttacccattataatttat 300  Q
    || |||  ||||||| |||||||||||    
T  42217850 aatccatgtttaccctttataatttat 42217876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 193487 - 193607
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| |||| |||||||||||||||||  | |||| ||||||     
T  193487 gagcttataagctatttttcagatgctattacaagtagcgtttgagcttatagcttatcatgttttattccatttatacccttaccactttaactaaaac 193586  T
Q  277 ccaattttacccattataatt 297  Q
    |||  ||||||| | ||||||    
T  193587 ccatgtttacccttaataatt 193607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 44748851 - 44748759
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  44748851 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 44748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 40480085 - 40479994
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  40480085 acgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 40479994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 52595392 - 52595273
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaa 280  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |||   |||||||||||| ||||||||  ||||||||||||| |||     
T  52595392 ttataagctatttttcagaagctattccaagtagcgttggagcttataacttctcaaaatttcttccatttttacccttaatattttatctaaaatccat 52595293  T
Q  281 ttttacccattataatttat 300  Q
    ||||| || |||||||||||    
T  52595292 ttttatcctttataatttat 52595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 33897954 - 33897844
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaac 277  Q
    |||||||||||||||||||||| |||||||||  |||||||||| |||||| |||||||| |||||||||  || ||||||||| ||||||||||||| |    
T  33897954 agcttataagctatttttcagacgctattccaaatagcgtttgaacttataacttatcattttttcttcctattgtacccttattattttatctaaaatc 33897855  T
Q  278 caattttaccc 288  Q
    || ||||||||    
T  33897854 catttttaccc 33897844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 37489989 - 37489895
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttta 268  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| |||| |||||||||||||  |||||||| ||||||    
T  37489989 cacgagcttataagctatttttcagacactattccaagtagcgtttgagcttatagcttctcattttttcttccattttaacccttatcatttta 37489895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 44947266 - 44947139
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc-------ttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| | || |||||||||||||||       ||||||||||||||||||||| ||||||||| ||||    
T  44947266 cacgagcttataagctatttttcagaagctattccaagcagtgtttgagcttatagcttatagcttatcatcttttcttccatttttacccttatcattt 44947167  T
Q  267 tatctaaaaaccaattttacccattata 294  Q
    ||  ||||| ||| |||||||| |||||    
T  44947166 taattaaaacccacttttaccctttata 44947139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 21707238 - 21707330
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  21707238 cacgagcttataagctatttttcagaagctattccaagtagcttttgagcttatagcttctcactttttcttccaattttacccttattattt 21707330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 43525830 - 43525922
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || |||| |||| ||||    
T  43525830 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacctttattattt 43525922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 46248029 - 46247937
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  46248029 cacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttacccttattattt 46247937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 48943076 - 48943168
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || || |||||| ||||    
T  48943076 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttatccttattattt 48943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2121914 - 2121974
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2121914 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 2579992 - 2579932
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2579992 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2579932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 2851907 - 2852037
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta-------tcatcttttcttccatttatacccttataattttat 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||  |||||||||| || ||||||||| |||| ||    
T  2851907 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatagcttctcactttttcttccacttttacccttattatttcat 2852006  T
Q  270 ctaaaaaccaattttacccattataatttat 300  Q
    |||||  ||| ||||||||| || |||||||    
T  2852007 ctaaattccatttttacccactacaatttat 2852037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 4240365 - 4240425
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4240365 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4240425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 8872960 - 8873052
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||  ||||||| || || ||||||||| ||||    
T  8872960 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 8873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 16127204 - 16127144
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16127204 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 16127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 19948383 - 19948323
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19948383 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19948323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 24536619 - 24536559
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24536619 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24536559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 28676955 - 28676895
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28676955 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28676895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 29081346 - 29081286
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29081346 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29081286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 29718266 - 29718206
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29718266 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 30864513 - 30864573
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30864513 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 35499688 - 35499748
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35499688 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35499748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 37088371 - 37088431
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37088371 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37088431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 37528788 - 37528728
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37528788 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 37714030 - 37713938
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||  ||||||| || || ||||||||| ||||    
T  37714030 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 37713938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 39876701 - 39876801
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||  ||||| || ||||||||| ||| || ||||    
T  39876701 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccaattttacccttattattctaactaa 39876800  T
Q  274 a 274  Q
    |    
T  39876801 a 39876801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 40563428 - 40563368
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40563428 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 41246336 - 41246436
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||  ||||| || ||||||||| ||| || ||||    
T  41246336 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacccttattattctaactaa 41246435  T
Q  274 a 274  Q
    |    
T  41246436 a 41246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 42497081 - 42497141
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42497081 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42497141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44845711 - 44845771
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44845711 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44845771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 47897671 - 47897611
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47897671 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 47897611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 50499849 - 50499909
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50499849 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 50499909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 52794982 - 52795042
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52794982 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 52795042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 2598686 - 2598769
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||| ||| |||| |||||||||    
T  2598686 agcttataagctatttttcagaagttattccaagtagcgtttgagcttataacttatgatcttttattctatttttacccttat 2598769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 37713204 - 37713071
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata---------gcttatcatcttttcttccatttatacccttataatt 265  Q
    |||||||||||| |||||||| ||||| ||||| | ||||||||||||||||||         |||| |||||||||||||||||| ||||||||| | |    
T  37713204 acgagcttataaactatttttaagaagttattctaagtagcgtttgagcttatataacttatagcttctcatcttttcttccatttttacccttattaat 37713105  T
Q  266 ttatctaaaaaccaattttacccattataatttat 300  Q
    |||||||||| || |||||||||||||||||||||    
T  37713104 ttatctaaaatcc-attttacccattataatttat 37713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 46318824 - 46318766
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46318824 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 46318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 48378313 - 48378371
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48378313 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 48378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21603885 - 21603945
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  21603885 cacgagcttataagctacttttcagaagctattccaagtagcgtttgagcttatagcttat 21603945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26541047 - 26541107
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  26541047 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttacagcttat 26541107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 38185857 - 38185917
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38185857 cacgagcttataagctatttttcagaagctattccaagtagcgtttgaacttatagcttat 38185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 45345073 - 45345013
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  45345073 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttat 45345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 45693451 - 45693391
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45693451 cacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45693391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 46972120 - 46972180
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  46972120 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 46972180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 49853108 - 49853048
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  49853108 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 49853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 50317094 - 50317034
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  50317094 cacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 50317034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 51709098 - 51709158
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  51709098 cacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagcttat 51709158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 52166155 - 52166095
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  52166155 cacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 52166095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 52857983 - 52858043
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52857983 cacgagcttataagctatttttcagaagctattccaagtatcgtttgagcttatagcttat 52858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 52931206 - 52931086
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaac 277  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||  ||||||| || || ||||||||| |||| || ||||  |    
T  52931206 agcttataagttatttttcagaagctattccaagtagcgtttaagcttatagcttctcactttttctttcaattttacccttattatttcatttaaattc 52931107  T
Q  278 caattttacccattataattt 298  Q
    || ||||| |||||| |||||    
T  52931106 catttttatccattacaattt 52931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 53779118 - 53779178
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  53779118 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 53779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 54542000 - 54541908
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  || |||  |||||||||| || ||||||||| ||||    
T  54542000 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttataatttctcactttttcttccaattttacccttattattt 54541908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 54672245 - 54672185
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  54672245 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataccttat 54672185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 55305174 - 55305114
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  55305174 cacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagcttat 55305114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 30548831 - 30548890
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta 233  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30548831 cacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagctta 30548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 52868244 - 52868130
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||| |||||||||| || |||| ||||||||||||| |||||  | |||||||||| || ||||||| | ||||||| | |    
T  52868244 cacgagcttataagctatttttgagaagctatttcaagtagtgtttgagcttataacttattgttttttcttccacttttacccttgttattttatttga 52868145  T
Q  274 aaaccaattttaccc 288  Q
    | |||| ||||||||    
T  52868144 ataccagttttaccc 52868130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 33391993 - 33392050
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  33391993 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 33392050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 12063793 - 12063733
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  12063793 cacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatatcttat 12063733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 25570470 - 25570526
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25570470 agcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 25570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 35100284 - 35100368
Alignment:
Q  190 atttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||| || ||||||||| ||| || |||||    
T  35100284 atttttcagaagctattccaagtagcgtttgagcttatagcttatcatttttaattccaattttacccttattattctaactaaa 35100368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 46627562 - 46627502
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  46627562 cacgaggttataagctaattttcagaagctattccaagtagcgtttgagcttatagcttat 46627502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 52225372 - 52225432
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  52225372 cacgagtttataagctatttttcagaagctattcaaagtagcgtttgagcttatagcttat 52225432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 32026470 - 32026341
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataattttatc 270  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||       ||||||||||  | |||||||||| || | ||||||  ||||||||    
T  32026470 agcttataagctatttttcagatgctattccaagtagcgtttgagcttataacttatagcttattgttttttcttccacttttgcccttactattttatc 32026371  T
Q  271 taaaaaccaattttacccattataatttat 300  Q
    ||||| ||  |||||||| |||||||||||    
T  32026370 taaaatccccttttaccctttataatttat 32026341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 45368700 - 45368757
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  45368700 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 45368757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 29203092 - 29203032
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||    
T  29203092 cacgagcttataagctatttttcagacgctatttcaagtagcatttgagcttatagcttat 29203032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 38892051 - 38891991
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  38892051 cacgagcctataagctatttttcagaaactattccaagtagcatttgagcttatagcttat 38891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 51003334 - 51003394
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| | |||| || ||||||||||||||||||||||||    
T  51003334 cacgagcttataagctatttttcagacgttatttcaagtagcgtttgagcttatagcttat 51003394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 5506719 - 5506846
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataattttat 269  Q
    |||||||||||||||||||||||  ||||| || ||||||||||||||       ||||||||||||| |||| |||||||||||||||||  | ||||     
T  5506719 gagcttataagctatttttcagatactattacaagtagcgtttgagcttatagcttatagcttatcatgttttattccatttatacccttaccactttaa 5506818  T
Q  270 ctaaaaaccaattttacccattataatt 297  Q
    |||||| |||  ||||||| | ||||||    
T  5506819 ctaaaatccatgtttacccttaataatt 5506846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 24628261 - 24628204
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||    
T  24628261 gagcttataagctatttttcagaagctattccaagtaacatttgaacttatagcttat 24628204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 41518451 - 41518508
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||    
T  41518451 gagcttataaactatttttcagaagctacttcaagtagcgtttgagcttatagcttat 41518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 42465085 - 42465032
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  42465085 ttataagctatttttcagaagctattctaagtagcgtttgagattatagcttat 42465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 20450545 - 20450646
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||| ||||||||||| |||||| || ||||||||||       | ||||||| |||||||||||| |||||||| ||||||||| ||||    
T  20450545 cacgagcttataagttatttttcagacgctattgcaagtagcgtttgtgcttataacttatagtttatcatcttttattccatttctacccttattattt 20450644  T
Q  267 ta 268  Q
    ||    
T  20450645 ta 20450646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 7041151 - 7041208
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||| ||||||||| ||||    
T  7041151 gagcttataagctatttttcagaagctacttcaagtagcgtttaagcttatagtttat 7041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 41538451 - 41538524
Alignment:
Q  227 tagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||||| |||||||||| || ||||||||| |||||||||||||  || |||||| || ||||||||||    
T  41538451 tagcttatcattttttcttccaattttacccttattattttatctaaaatacatttttactcaatataatttat 41538524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 47173655 - 47173688
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattc 207  Q
    ||||||||||||||||||||||||||||||||||    
T  47173655 cacgagcttataagctatttttcagaagctattc 47173688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 612143 - 612226
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||  |||||| || | || ||| || |||||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  612143 agcttataacttattttccatacgccatttcaagtagcgtttgagcttatagcttataatcttttgtcccatttttacctttat 612226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 32982976 - 32982921
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc 230  Q
    |||||||||||||||||||||| ||||||||| || |||  | |||||||||||||    
T  32982976 acgagcttataagctatttttcggaagctatttcaagtaatgcttgagcttatagc 32982921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 45368577 - 45368644
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||||||||| | |   ||| ||||||||| ||||||||| ||||||||||||||||| ||||    
T  45368577 gggtctgtttggtaacacccaaaaaggagcttatagcttatagctgatagcttataagctcgtctgac 45368644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 52225257 - 52225319
Alignment:
Q  72 ttgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||||||||||||||||  |||||||       ||||||||| ||||||||||||||||||||||    
T  52225257 ttgggtctgtttggtaagatcagaaaatgag-------cttatagctcatagcttataagctcgtttgac 52225319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 30814315 - 30814261
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    |||||| ||||||| |||||||| ||| |||||||| ||||||||||| ||||||    
T  30814315 cacgagtttataagatatttttcggaaactattccaagtagcgtttgaacttata 30814261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 22257755 - 22257800
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||| | |||||| || ||||||||||||||||||||||||    
T  22257755 tatttttcaaatgctatttcaagtagcgtttgagcttatagcttat 22257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 29757534 - 29757473
Alignment:
Q  239 ttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||||||| ||||||| | |||||||| ||||  |||||| | ||||||||||||||    
T  29757534 ttttcttccatttttacccttgttattttatcaaaaattcaatttaatccattataatttat 29757473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 40480184 - 40480118
Alignment:
Q  96 aaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaa 162  Q
    |||||||||| || ||| ||||| ||||||||||||||||||||||       ||||||||||||||    
T  40480184 aaatgagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaa 40480118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 27446514 - 27446574
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||| |||||||||||||||||||| ||  |||||| |||| ||||| |||||    
T  27446514 cacgagtttatatgctatttttcagaagctatttcaaatagcgtctgagtttataacttat 27446574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 37490082 - 37490042
Alignment:
Q  101 agcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||||| ||||||||| |||||||||||||| |||||||    
T  37490082 agcttatagcttatagctgatagcttataagcttgtttgac 37490042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 97)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 33151984 - 33152117
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagctt-------atagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||||||       ||||||| |||||||||||||||||| ||||||||| ||||    
T  33151984 cacgagcttataagctatttttaagaagctatttcaagtagcgtttgagcttgtaacttatagcttctcatcttttcttccatttttacccttattattt 33152083  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    |||||||||  |||||||||||||||||||||||    
T  33152084 tatctaaaattcaattttacccattataatttat 33152117  T

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Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 34087056 - 34087170
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| || ||||||| | ||||||| | |    
T  34087056 cacgagcttataagctatttttgagaagctattccaggtagcgtttgagcttatagcttattattttttcttccacttttacccttgttattttatttga 34087155  T
Q  274 aaaccaattttaccc 288  Q
    | |||| ||||||||    
T  34087156 ataccagttttaccc 34087170  T

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Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 13121629 - 13121537
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| || ||||||||| ||||    
T  13121629 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcactttttcttccaattttacccttattattt 13121537  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 41005035 - 41004905
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat-------catcttttcttccatttatacccttataattttat 269  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||| ||||||||||||       ||||||||||||||||| ||||||||| |||||||    
T  41005035 gagcttataagttatttttaagaagctatttcaagtagcgtttgaacttatagcttatagcttctcatcttttcttccatttttacccttattattttat 41004936  T
Q  270 ctaaaaaccaattttacccattataatttat 300  Q
    |||||| ||||||||| ||||||||||||||    
T  41004935 ctaaaatccaattttatccattataatttat 41004905  T

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Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 50540862 - 50540991
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||| |  ||||| ||||||||| ||||||  |||    
T  50540862 cacgagtttataagctatttttcagaagctattacaagtagcgtttgagcttatagcttctcatattttatctcatttttacccttattattttaattaa 50540961  T
Q  274 aaaccaattttacccattataatttatcac 303  Q
    || |||  ||||||| ||||||||||||||    
T  50540962 aatccatgtttaccctttataatttatcac 50540991  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 7710999 - 7710907
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  7710999 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 7710907  T

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Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 17046819 - 17046911
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  17046819 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 17046911  T

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Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 25602076 - 25602200
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||  |||||||||| || ||||||||| |||| || |||    
T  25602076 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattatttcatttaa 25602175  T
Q  274 aaaccaattttacccattataattt 298  Q
    |  ||| ||||| |||||| |||||    
T  25602176 attccatttttatccattacaattt 25602200  T

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Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 38967509 - 38967417
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  38967509 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 38967417  T

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Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 39826690 - 39826782
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  39826690 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacattttcttccaattttacccttattattt 39826782  T

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Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 49240323 - 49240200
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||    ||||||||||| ||||||||  |||||||||||||     
T  49240323 gagcttataagctatttttcagaagctatttcaaatagcgtttgagcttatagcttctcaaaagttcttccatttttacccttaatattttatctaaaat 49240224  T
Q  277 ccaattttacccattataatttat 300  Q
    ||| ||||| || |||||||||||    
T  49240223 ccatttttatcctttataatttat 49240200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 7781209 - 7781082
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc-------ttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||       ||||||||||||||| ||||| ||||||||| ||||    
T  7781209 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttatagcttatcatcttttctttcatttttacccttatcattt 7781110  T
Q  267 tatctaaaaaccaattttacccattata 294  Q
    ||  ||||| ||| |||||||| |||||    
T  7781109 taattaaaacccacttttaccctttata 7781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 42963919 - 42964032
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    ||||| ||||||||||||||| |||||||||| || |||||||||||||||| |||||||  | |||||||||| || ||||||||| ||||||| | ||    
T  42963919 acgagtttataagctatttttgagaagctatttcaagtagcgtttgagcttacagcttattgttttttcttccacttttacccttattattttatttgaa 42964018  T
Q  275 aaccaattttaccc 288  Q
     |||||||||||||    
T  42964019 taccaattttaccc 42964032  T

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Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 47134573 - 47134484
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  |||||||| | || ||||||||| ||||    
T  47134573 gagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttatcactttttcttctaattttacccttattattt 47134484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 1918115 - 1918175
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1918115 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1918175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2498012 - 2498072
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2498012 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2498072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 19898953 - 19898893
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19898953 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19898893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26204364 - 26204424
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26204364 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 26204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 29586248 - 29586308
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29586248 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29586308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 29704129 - 29704069
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29704129 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29704069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 30721668 - 30721608
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30721668 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30721608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 30774171 - 30774231
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30774171 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 31150470 - 31150410
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31150470 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31150410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 34319479 - 34319539
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34319479 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34319539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36301150 - 36301090
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36301150 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36838740 - 36838680
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36838740 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36838680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 42064362 - 42064302
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42064362 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42064302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44909930 - 44909990
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44909930 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44909990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 40887966 - 40888025
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40887966 acgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40888025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 7024911 - 7025013
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatct 271  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||  ||||| || ||||||||| ||| || ||    
T  7024911 accatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacccttattattctaact 7025010  T
Q  272 aaa 274  Q
    |||    
T  7025011 aaa 7025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 18347457 - 18347335
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaac 277  Q
    ||||||||||||||||||||||  |||||||| |||| ||||||||||||||||| |||  |||||||||| || ||||||||| |||| || ||||  |    
T  18347457 agcttataagctatttttcagacactattccaagtagtgtttgagcttatagcttctcactttttcttccaattttacccttattatttcatttaaattc 18347358  T
Q  278 caattttacccattataatttat 300  Q
    || ||||| |||||| |||||||    
T  18347357 catttttatccattacaatttat 18347335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 9169151 - 9169232
Alignment:
Q  180 cttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||   |||||||||| || |||||||||    
T  9169151 cttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctccctttttcttccaattttacccttat 9169232  T

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Target: chr1; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 44956369 - 44956482
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    ||||| ||||||| ||||||||||| ||||||||| |||| ||||||||||||| |||||||| ||||||||||||| ||| |||||   ||||||||||    
T  44956369 acgagattataagttatttttcagatgctattccaagtagagtttgagcttataacttatcatattttcttccatttttacgcttattgatttatctaaa 44956468  T
Q  275 aaccaattttaccc 288  Q
    | ||| || |||||    
T  44956469 atccatttctaccc 44956482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 322955 - 323015
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  322955 cacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 323015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 1507788 - 1507728
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  1507788 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 1507728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3270748 - 3270808
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3270748 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 3270808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3661035 - 3661095
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  3661035 cacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 3661095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 15313337 - 15313393
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15313337 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 15313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 17499930 - 17499870
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17499930 cacgagcttataagctatttttcagaagctattccaagtagcgtttaagcttatagcttat 17499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 32368384 - 32368324
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32368384 cacgagcttatatgctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32368324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 33524618 - 33524678
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33524618 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagtttat 33524678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 49220518 - 49220458
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  49220518 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 49220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 50351122 - 50351182
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  50351122 cacgagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagcttat 50351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 29374423 - 29374480
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29374423 gagcttataagctatttttcagaagctattccaagtagagtttgagcttatagcttat 29374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5697567 - 5697627
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  5697567 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttataccttat 5697627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22099008 - 22099068
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  22099008 cacgagtttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 22099068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26843841 - 26843901
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  26843841 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagtttatagcttat 26843901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36043345 - 36043285
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36043345 cacgagcttataagctatttttcagatgctattctaagtagcgtttgagcttatagcttat 36043285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 37703760 - 37703820
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  37703760 cacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttataacttat 37703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 38676579 - 38676639
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  38676579 cacgaacttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 38676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 42614176 - 42614120
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  42614176 agcttataagctatttttcagaagctattccaagtagcgtttgaggttatagcttat 42614120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 50171338 - 50171282
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  50171338 agcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 50171282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 16085655 - 16085596
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  16085655 acgagcttataagctatttttcagatgctatttcaagtagcgtttgagcttatagcttat 16085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 31259584 - 31259494
Alignment:
Q  212 tagcgtttgagcttatagcttatcatctttt--cttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||||||||||||||||||||||||| ||||  |||| |||| ||||||| | ||||||||||||| ||| ||||||||||||| ||||||    
T  31259584 tagcgtttgagcttatagcttatcattttttttcttctatttctacccttgttattttatctaaaatccatttttacccattatcatttat 31259494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 34318497 - 34318556
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  34318497 acgagcttataagctatttttcagatgctattccaagtagtgtttgagcttatagcttat 34318556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 46056471 - 46056357
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||||||||||| ||||||||||| |||||| || ||||| ||| |||||||||||||| ||||||| || ||||| |||||| || | ||||  |||    
T  46056471 cacgagcttataagatatttttcagacgctatttcaagtagcatttaagcttatagcttattatcttttgtttcatttttaccctcatcactttaattaa 46056372  T
Q  274 aaaccaattttaccc 288  Q
    || ||| ||||||||    
T  46056371 aatccatttttaccc 46056357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 46369904 - 46369954
Alignment:
Q  184 taagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46369904 taagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 46369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 52703156 - 52703098
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  52703156 cacgagcttataagttatttttcagaagctatttcaagtagcgtttgagcttatagctt 52703098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 30495233 - 30495140
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaa 274  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||| |||  |||  ||||| || ||||||||| ||| ||||||||    
T  30495233 ttataagctatttttcagaagctatttcaagtagcgtttcagcttatagcttctcacttttaattccagttttacccttattattctatctaaa 30495140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3391210 - 3391270
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  3391210 cacgagcttataaactatttttcagaagctattccaagtaacgtttaagcttatagcttat 3391270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15348914 - 15348974
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15348914 cacgagcttataaattatttttcagaagctattccaagtagcgtttgagcttatagtttat 15348974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 33632305 - 33632381
Alignment:
Q  151 tctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttat 227  Q
    |||||||||||||| | | | |||| |||||||||||||||||||||||||||||||||   |||||||||||||||    
T  33632305 tctgtttggtaatgctttttcaccatgagcttataagctatttttcagaagctattccaaacagcgtttgagcttat 33632381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 37672395 - 37672335
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  37672395 cacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttataacttat 37672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 49185226 - 49185170
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  49185226 agcttataaactatttttcagaagctattccaagtaacgtttgagcttatagcttat 49185170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 51423029 - 51422969
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  51423029 cacgagtttataaactattttttagaagctattccaagtagcgtttgagcttatagcttat 51422969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 39583187 - 39583246
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  39583187 acgagtttataagctatttttcagaagctattccaagtagcgtttgagtttataccttat 39583246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 46929028 - 46928969
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||    
T  46929028 acgagcttataagctatttttcagaagctattctaattagcgtttgtgcttatagcttat 46928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 25134938 - 25135000
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatca 236  Q
    |||||||||||||||||||||||||| ||||||  | |||| |||||||||||||||||||||    
T  25134938 cacgagcttataagctatttttcagacgctattttaagtagtgtttgagcttatagcttatca 25135000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 52703240 - 52703165
Alignment:
Q  110 cttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttata 185  Q
    ||||||||| ||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  52703240 cttatagcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaatgctctcttaccacgagcttata 52703165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 36379184 - 36379131
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  36379184 ttataagttatttttcaaaagctattccaagtagcgtttgagcttatagcttat 36379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 40935954 - 40935893
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta 233  Q
    |||| ||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  40935954 accatgagtttataaactatttttcagaaactattccaagtagcgtttgagcttatagctta 40935893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 43727114 - 43727171
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  43727114 gagcttataaactatttttcagaagttattccaagtagcgtttgaacttatagcttat 43727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 9894931 - 9894987
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||||    
T  9894931 agcttataagctatttttcagacgctattcaaagtagcgtttgagcttatagtttat 9894987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 13570838 - 13570778
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||| |||||||||||||||||||| |||||||||  |||||||||| ||||||||||||    
T  13570838 cacgaacttataagctatttttcagacgctattccaaatagcgtttgaacttatagcttat 13570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 13800826 - 13800894
Alignment:
Q  231 ttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattta 299  Q
    ||||||| ||||||||||||| ||| ||||  |||| |||||||| |||||||||||||||||||||||    
T  13800826 ttatcattttttcttccatttttactcttactatttaatctaaaatccaattttacccattataattta 13800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 29374302 - 29374366
Alignment:
Q  76 gtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttga 140  Q
    |||||||||||||| |  ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  29374302 gtctgtttggtaaggttcctaaatgagcttatagcttatagcttttagcttataagctcgtttga 29374366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 49822212 - 49822152
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||| ||||| |||| || ||||||||||||||||||||||||    
T  49822212 cacgagcttataaactattttttagaagttatttcaagtagcgtttgagcttatagcttat 49822152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 44719015 - 44718924
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||| |||||||||||| |||||| || ||||||||| |||||||| ||| |||  ||||||| || || ||||||||| ||||    
T  44719015 acgagcttataaactatttttcagacgctatttcaagtagcgtttaagcttataacttctcactttttctttcaattttacccttattattt 44718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 9770018 - 9769964
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||||||||||    
T  9770018 cacgagcttataagctatttttcaaaagctattccaaataacgtttgagcttata 9769964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 40719564 - 40719622
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    ||||||||||||| |||||||||||||| |||| || |||||||||||| |||||||||    
T  40719564 cacgagcttataaactatttttcagaagttatttcaagtagcgtttgagtttatagctt 40719622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 52071292 - 52071202
Alignment:
Q  115 agctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcagaagctat 205  Q
    |||| ||||||||||||||| ||||||       | |||||||||||||||| | | ||||||||||||||| |||||||||||| |||||    
T  52071292 agcttatagcttataagctcatttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttataaactatttttcagacgctat 52071202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 6814113 - 6814177
Alignment:
Q  170 ttaccacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||| |||| |||||||| ||||||||||| |||||| || |||||||||||||||||| |||||    
T  6814113 ttacaacgaacttataagttatttttcagacgctatttcaagtagcgtttgagcttataacttat 6814177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8221280 - 8221220
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| || ||||||||  ||||||||||  |||||||||||    
T  8221280 cacgagcttataagctatttttcaaaaactattccaaatagcgtttgaatttatagcttat 8221220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 25134821 - 25134929
Alignment:
Q  77 tctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccac 176  Q
    ||||||||| |||  || ||||| ||||||||  |||||||||||||||||||||||||| ||||       ||||||||||||||  || | |||| ||    
T  25134821 tctgtttggcaagggcagtaaattagcttataatttatagctaatagcttataagctcgtctgacaaaaaaagttctgtttggtaacagttttttacaac 25134920  T
Q  177 gagcttata 185  Q
    |||||||||    
T  25134921 gagcttata 25134929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 19715386 - 19715463
Alignment:
Q  223 cttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||||||||| ||| |||||| ||  |||||||| |||||||||||||  |  |||||||| |||||||||||    
T  19715386 cttatagcttatcatttttacttccaatttcacccttattattttatctaaaattcttttttaccctttataatttat 19715463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 28869056 - 28868920
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat-------catcttttctt---ccatttatacccttataa 263  Q
    |||||||||||||  ||||||| ||||  |||| || ||| ||||||||||||||||||||       |||||||| ||   ||||||  || ||||| |    
T  28869056 cacgagcttataaattatttttaagaaattatttcaagtaacgtttgagcttatagcttatagtttctcatcttttttttttccattttgactcttatta 28868957  T
Q  264 ttttatctaaaaaccaattttacccattataatttat 300  Q
    |||||||||||| |||||||||  |||||||||||||    
T  28868956 ttttatctaaaatccaattttattcattataatttat 28868920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 2029020 - 2028953
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatctttt 242  Q
    ||||| |||||| |||||||||||| |||||| || ||| ||||| || ||||| |||||||||||||    
T  2029020 acgagtttataaactatttttcagacgctatttcaagtaccgtttaagattataacttatcatctttt 2028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 234
Target Start/End: Original strand, 2479261 - 2479296
Alignment:
Q  199 aagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||| ||||||||||||||||||||||||    
T  2479261 aagctattccaagtagcgtttgagcttatagcttat 2479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 10628870 - 10628787
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||  |||||||||||   |||| || |||||||||||||||||| ||||||| ||||| ||| |||| |||| ||||    
T  10628870 agcttataacttatttttcagacattatttcaagtagcgtttgagcttataacttatcaccttttattctatttttacctttat 10628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 33561929 - 33561894
Alignment:
Q  199 aagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33561929 aagctattccaagtagcgtttgagcttatagcttat 33561894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 46088045 - 46087912
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||| ||||||||||||||||||| | ||||||| |||   ||||       ||||||||||||||||| |||||||||| || ||| |||||  |||    
T  46088045 cacgagtttataagctatttttcagacgttattccaagtaatatttgagcttgtagcttatagcttatcattttttcttccaattttactcttattgttt 46087946  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||||| |||  |  |||||||| |||||||||||    
T  46087945 tatcttaaattcttttttaccctttataatttat 46087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 27264510 - 27264580
Alignment:
Q  216 gtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttac 286  Q
    ||||||||||||| ||||  || |||||||| | || ||||||||| ||||||||||||| ||| ||||||    
T  27264510 gtttgagcttataccttaatatattttcttctaattttacccttattattttatctaaaatccatttttac 27264580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 27659383 - 27659317
Alignment:
Q  201 gctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttt 267  Q
    |||||| || |||||||||||||||||| ||||||||||||| |   |||| ||||||||| |||||    
T  27659383 gctatttcaagtagcgtttgagcttataacttatcatcttttatcttatttttacccttattatttt 27659317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 28429018 - 28429059
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttata 115  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  28429018 gggtctgtttggtaagcccactaaatgagcttatagcttata 28429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 18347581 - 18347513
Alignment:
Q  73 tgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||||||||| ||||| |   || |||||||||| ||||||||| |||||||||||| | |||||||    
T  18347581 tgggtctgtttgataagacccaaaagtgagcttatagcttatagcttatagcttataagtttgtttgac 18347513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 28429119 - 28429147
Alignment:
Q  174 cacgagcttataagctatttttcagaagc 202  Q
    |||||||||||||||||||||||||||||    
T  28429119 cacgagcttataagctatttttcagaagc 28429147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 46088170 - 46088098
Alignment:
Q  69 atattgggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||| ||||||||||||||||  | | || | |||||||| ||||||||  |||| |||||||||||||||||    
T  46088170 atatagggtctgtttggtaaggcctcaaagttagcttatagcttatagcagatagtttataagctcgtttgac 46088098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 9316 - 9430
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  9316 cacgagcttataaactatttttcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttccatctttacccttgcaattttctctaa 9415  T
Q  274 aaaccaattttaccc 288  Q
    ||||||||| |||||    
T  9416 aaaccaattctaccc 9430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 22756562 - 22756646
Alignment:
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttatcactc 305  Q
    |||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  22756562 agcttatagtctatcatcttttcttccatttatacccttattattttatctaaaaacaaattttacccattataatttatcactc 22756646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 23648280 - 23648406
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| | ||||||| |||||||| ||||||||| |||||| ||||    
T  23648280 cacgagcttataagctatttttcagaagctatttcaagtagcttctgagcttatagctttttatcttttgttccatttttacccttattattttaactaa 23648379  T
Q  274 aaaccaattttacccattataatttat 300  Q
    ||  ||| ||||||| |||| ||||||    
T  23648380 aagtcaaatttaccctttatcatttat 23648406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 31100075 - 31099983
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  31100075 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 5301662 - 5301529
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat--catct-----tttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  | |||     |||||||||||| ||||||||  ||||    
T  5301662 cacgagcttataagctatttttcagaagctattccaagtagcgtttaagcttatagcttatagcttctcaaaatttcttccatttttacccttaatattt 5301563  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||| ||| ||||| || |||||||||||    
T  5301562 tatctaaaatccatttttatcctttataatttat 5301529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 298
Target Start/End: Complemental strand, 6104729 - 6104608
Alignment:
Q  176 cgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaa 275  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||||||| ||||||| ||| | |||||||   ||||| |||||||    
T  6104729 cgagcttataagctatttttcagatactatttcaagtagcgtttgagcttatagcttatcattttttctttcatctttaccctttctattttctctaaaa 6104630  T
Q  276 accaattttacccattataattt 298  Q
    ||||||| ||||| |||||||||    
T  6104629 accaattctaccc-ttataattt 6104608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 305
Target Start/End: Original strand, 11443033 - 11443170
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt-------atcatcttttcttccatttatacccttataatttt 267  Q
    |||||||||||| ||||||| ||||  ||||| || |||||||||||||||||| |||       |||||||||||||||||||||| |||||| |||||    
T  11443033 acgagcttataacctattttccagactctatttcaagtagcgtttgagcttatatcttttaacttatcatcttttcttccatttatatccttattatttt 11443132  T
Q  268 atctaaaaaccaattttacccattataatttatcactc 305  Q
    |||||||| |||||||| ||||||||| ||||| ||||    
T  11443133 atctaaaatccaattttgcccattatattttattactc 11443170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 34439769 - 34439902
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctta-------tcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       |||   |||||||||||| ||||||||  ||||    
T  34439769 cacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttacagcttctcaaaatttcttccatttttacccttaatattt 34439868  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||| ||| ||||| || |||||||||||    
T  34439869 tatctaaaatccatttttatcctttataatttat 34439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 21894338 - 21894465
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttg-------agcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||       ||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  21894338 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttccatttttacgcttatcattt 21894437  T
Q  267 tatctaaaaaccaattttacccattata 294  Q
    ||  ||||| ||| | |||||| |||||    
T  21894438 taattaaaacccactcttaccctttata 21894465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 558447 - 558507
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  558447 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 558507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2442511 - 2442571
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2442511 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2442571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 10856219 - 10856311
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||  | || ||||||||| ||||    
T  10856219 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttttaattttacccttattattt 10856311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 12297451 - 12297511
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12297451 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 14227596 - 14227536
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14227596 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 14227536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 20805076 - 20805136
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20805076 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 20805136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 30811209 - 30811149
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30811209 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30811149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 32731845 - 32731905
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32731845 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 34685076 - 34685016
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34685076 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 3108066 - 3107945
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc-------ttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||       |||| ||||||||||| | || ||||||||| | ||    
T  3108066 cacgagcttataagctatttttcagaagctatttcaaatagcgtttgagcttatagcttatagcttattatcttttcttctaattttacccttattaatt 3107967  T
Q  267 tatctaaaaaccaattttaccc 288  Q
    |||||||||||||||| |||||    
T  3107966 tatctaaaaaccaattctaccc 3107945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2970761 - 2970821
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  2970761 cacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2970821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5681606 - 5681666
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  5681606 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 5681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5943078 - 5943138
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  5943078 cacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 5943138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 7317671 - 7317611
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7317671 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 7317611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 12432681 - 12432621
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  12432681 cacgagcttataagctatttttcagaagccattccaagtagcgtttgagcttatagcttat 12432621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 28076509 - 28076569
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  28076509 cacgagcttataagctatttttgagaagctattccaagtagcgtttgagcttatagcttat 28076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 33540786 - 33540726
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  33540786 cacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 33540726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 34232975 - 34232915
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  34232975 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 34232915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 34904037 - 34904093
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34904037 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34904093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 12140939 - 12140806
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagc-------ttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||       |||| ||||||| |||| ||| ||||||||| ||||    
T  12140939 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttatagcttattatcttttgttccttttttacccttattattt 12140840  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    || ||||||  ||  ||||||| |||||||||||    
T  12140839 taactaaaattcatatttaccctttataatttat 12140806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 33453822 - 33453880
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  33453822 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagctt 33453880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 29414980 - 29414924
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29414980 agcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 29414924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 31452014 - 31451923
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||| |||  |||||||||| || ||||||||| ||||    
T  31452014 cacgagcttataagctgtttttcagaagctattccaagtagtgtttgagctta-agcttctcactttttcttccaattttacccttattattt 31451923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 3636701 - 3636643
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  3636701 cacgagcttataagctatttttcagaagctattccaagtagcctttgaacttatagctt 3636643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 5893950 - 5893877
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccattt 251  Q
    |||||||||  |||||| |||| |||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  5893950 agcttataacttattttccagacgctatttcaagtagcgtttgagcttatagcttatcatcttttattccattt 5893877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 6709749 - 6709696
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6709749 ttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 6709696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 11015676 - 11015736
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  11015676 cacgagcttacaagctatttttgagaagctattctaagtagcgtttgagcttatagcttat 11015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 31049420 - 31049480
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  31049420 cacgagcttataagctatttttgagaagctattccaaatagtgtttgagcttatagcttat 31049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 29823094 - 29823036
Alignment:
Q  176 cgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  29823094 cgagcttataagttatttttcaaaagctattcaaagtagcgtttgagcttatagcttat 29823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 15591211 - 15591151
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||||    
T  15591211 cacgagcttataaactatttttcagaagctacttcaagtagcgtttgagcttataacttat 15591151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 20563480 - 20563538
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    ||||||||||||| ||||||||||||||||||| || ||||| | ||||||||||||||    
T  20563480 cacgagcttataaactatttttcagaagctatttcaagtagcatctgagcttatagctt 20563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 7292605 - 7292549
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||| |||||| | || ||| ||||||||||||||||||||    
T  7292605 agcttataagctatttttcataagctacttcaagtaacgtttgagcttatagcttat 7292549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 3832421 - 3832337
Alignment:
Q  115 agctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcaga 199  Q
    |||| ||||||||||||||||||||||         ||| |||||||||||||| | |||||||||||||||| |||||||||||    
T  3832421 agcttatagcttataagctcgtttgacaaaaaaaactctatttggtaatggtctttcaccacgagcttataagttatttttcaga 3832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 3832454 - 3832407
Alignment:
Q  68 tatattgggtctgtttggtaagatcactaaatgagcttataccttata 115  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  3832454 tatattgggtatgtttggtaagctcactaaatgagcttatagcttata 3832407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 10432378 - 10432455
Alignment:
Q  223 cttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||||| ||||||||||||||||||||||  || ||| ||||| | ||||||| ||| |||||||| |||||| ||||    
T  10432378 cttataacttatcatcttttcttccattttcacacttttaattatctctaaaatccatttttaccctttataacttat 10432455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 1225525 - 1225573
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatag 229  Q
    ||||||||||||||| ||||| |||| || |||||||||||||||||||    
T  1225525 ttataagctattttttagaagttatttcaagtagcgtttgagcttatag 1225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 1806375 - 1806343
Alignment:
Q  174 cacgagcttataagctatttttcagaagctatt 206  Q
    |||||||||||||||||||||||||||||||||    
T  1806375 cacgagcttataagctatttttcagaagctatt 1806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 9896796 - 9896852
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| | |||| || |||||||||||| | |||||||||    
T  9896796 agcttataagctatttttcagacgttatttcaagtagcgtttgagttaatagcttat 9896852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 29823212 - 29823149
Alignment:
Q  78 ctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||||||| ||  |||| | |||||| || |||||| ||||||||||||||||||||||    
T  29823212 ctgtttggtaagaccagaaaattaacttatagctcatagcttatagcttataagctcgtttgac 29823149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 1806469 - 1806428
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  1806469 gagcttttagcttatagcttatagcttataagctcgtttgac 1806428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 10544405 - 10544474
Alignment:
Q  231 ttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||| |||||||||| ||||||   |||||| ||||||||||||| | | ||||| ||||||||||||||    
T  10544405 ttattatcttttctttcatttacgtccttattattttatctaaaatcaatttttatccattataatttat 10544474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 12297357 - 12297398
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    |||||| |||||| ||||| ||||||||||||||||||||||    
T  12297357 gagcttttaccttttagcttatagcttataagctcgtttgac 12297398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 20584433 - 20584518
Alignment:
Q  215 cgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||||||| |||||  ||||||| |||||||||| || |||| || | |||||||||||||   | ||||||| ||||||||||||    
T  20584433 cgtttgagtttataatttatcattttttcttccaattttacctttgttattttatctaaaatttatttttacctattataatttat 20584518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 22756521 - 22756570
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatag 123  Q
    ||||||||||||||||  |||||||||||||||||  |||||||| ||||    
T  22756521 gggtctgtttggtaagcccactaaatgagcttatagtttatagcttatag 22756570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 19415382 - 19415426
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagctta 233  Q
    ||||||||||| |||||| || |||||||||||| ||||||||||    
T  19415382 tatttttcagacgctatttcaagtagcgtttgagtttatagctta 19415426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 9e-30; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 11466107 - 11465981
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | |||||||||| || ||||||||  ||||| |||||    
T  11466107 cacgaacttataagctattttttagaagctattccaagtagcgtttgagcttatagcttattgttttttcttccacttttacccttactattttttctaa 11466008  T
Q  274 aaaccaattttacccattataatttat 300  Q
     | ||| |||||||| |||||||||||    
T  11466007 tatccatttttaccctttataatttat 11465981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 27869630 - 27869508
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||| || | ||||||| |||||||||||| |||||||||||  | ||||||||||||  ||||||||| |||||||||||    
T  27869630 cacgagcttataagctatttttcggacgttattccaagtagcgtttgagtttatagcttattgttttttcttccattattacccttattattttatctaa 27869531  T
Q  274 aaaccaattttacccattataat 296  Q
    |  ||| ||||||||||||||||    
T  27869530 attccatttttacccattataat 27869508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 17192510 - 17192386
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||  |||||||||| || ||||||||| |||| || |||    
T  17192510 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattatttcatttaa 17192411  T
Q  274 aaaccaattttacccattataattt 298  Q
    |  ||| ||||| |||||| |||||    
T  17192410 attccatttttatccattacaattt 17192386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 42375851 - 42375759
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  42375851 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 42375759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 46757800 - 46757924
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaa 276  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||| || ||||||   |||||||||||     
T  46757800 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttatcatattttcttccatttttatccttattgatttatctaaaac 46757899  T
Q  277 ccaatttta-cccattataatttat 300  Q
    ||| || || ||| |||||||||||    
T  46757900 ccatttctacccctttataatttat 46757924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 47587173 - 47587081
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  47587173 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 47587081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 17844631 - 17844764
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat--catct-----tttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||     |||||||||||| ||||||||  ||||    
T  17844631 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttatagcttctcaaaatttcttccatttttacccttaatattt 17844730  T
Q  267 tatctaaaaaccaattttacccattataatttat 300  Q
    ||||||||| ||| ||||| || |||||||||||    
T  17844731 tatctaaaatccatttttatcctttataatttat 17844764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 19832058 - 19831966
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  19832058 cacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 19831966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 483050 - 482990
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  483050 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 9487494 - 9487554
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9487494 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 9487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 21313853 - 21313765
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  21313853 agcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 21313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21374720 - 21374780
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21374720 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 31511387 - 31511447
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31511387 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31511447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 33026963 - 33027023
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33026963 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 33027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34540975 - 34541031
Alignment:
Q  17 tcatttacaattagtgaccacaaaagagtaacattattattttaaaaaatatatatt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34540975 tcatttacaattagtgaccacaaaagagtaacattattattttaaaaaatatatatt 34541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 34709320 - 34709380
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34709320 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34709380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 35587666 - 35587726
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35587666 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35587726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 36246444 - 36246384
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36246444 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 36407315 - 36407375
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36407315 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36407375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 36436240 - 36436332
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||  |||||||||| || ||||||||| ||||    
T  36436240 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttataacttctcactttttcttccaattttacccttattattt 36436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 40258944 - 40259004
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40258944 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40259004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 40637228 - 40637168
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40637228 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40637168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 42587451 - 42587391
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42587451 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 43254190 - 43254250
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43254190 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 43254250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44596697 - 44596757
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44596697 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44596757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 45686984 - 45686924
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45686984 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45686924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 35000806 - 35000925
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaa 280  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||  | |||||||||| || ||||||||| | ||||||| ||| ||      
T  35000806 ttataaactatttttcagatgctattccaagtagcgtttgagcttatagcttattgttttttcttccacttttacccttattactttatctgaaatccgt 35000905  T
Q  281 ttttacccattataatttat 300  Q
    |||||||| |||||| ||||    
T  35000906 ttttaccctttataacttat 35000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 23029877 - 23030009
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat--catct-----tttcttccatttatacccttataattt 266  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||  | |||     ||||||||| || ||||||||  ||||    
T  23029877 cacgagcttataaactattattcagaagctattccaagtagcgtttgagcttatagcttatagcttctcaatatttcttccaattttacccttaatattt 23029976  T
Q  267 tatctaaaaaccaattttacccattataattta 299  Q
    ||||||||| ||| ||||| || ||||||||||    
T  23029977 tatctaaaatccatttttatcctttataattta 23030009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 27655738 - 27655681
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27655738 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27655681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 10312097 - 10312037
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10312097 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatatcttat 10312037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 21254765 - 21254705
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  21254765 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 21254705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21742059 - 21742119
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21742059 cacgagcttaaaagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 27089724 - 27089664
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  27089724 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 27089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 27188577 - 27188637
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  27188577 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 27188637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 43134491 - 43134551
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  43134491 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 43134551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 45222141 - 45222081
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  45222141 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttttagcttat 45222081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 48832121 - 48832061
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  48832121 cacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 48832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 45672382 - 45672464
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttataccc 257  Q
    |||| |||||||||||||||||||| | |||| || ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  45672382 acgaacttataagctatttttcagacgttatttcaagtagcgtttgagcttatagtttatcatcttttattccatttttaccc 45672464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 22642319 - 22642218
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    |||||| ||||||||||||||| | | ||||||| | ||||| ||||||||||||||||||||| |||||||| |||| |||||||||  |||||| |||    
T  22642319 cacgagtttataagctattttttaaacgctattctaagtagcatttgagcttatagcttatcatattttcttctatttttacccttattgttttatgtaa 22642220  T
Q  274 aa 275  Q
    ||    
T  22642219 aa 22642218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 12345135 - 12345075
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  12345135 cacgagcttataagctatttttcagaagctatttcaagtagcatttgagcttatagcttat 12345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 33203736 - 33203676
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  33203736 cacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 33203676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 44743804 - 44743864
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  44743804 cacgagcttataagctatttttcagaagctattccaagtagcatttgagtttatagcttat 44743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 47471030 - 47470970
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  47471030 cacgagcttataaactatttttcagaagttattccaagtagcgtttgagcttatagcttat 47470970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 47584185 - 47584305
Alignment:
Q  180 cttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaacca 279  Q
    ||||||| |||||||||||||| |||||||  ||||||||||| ||||||||| |||| |||| | |||||| ||||||||| ||||||  | ||| |||    
T  47584185 cttataaactatttttcagaagttattccaaatagcgtttgagtttatagcttctcatattttatcccatttttacccttattattttaattcaaatcca 47584284  T
Q  280 attttacccattataatttat 300  Q
      ||||||| |||||||||||    
T  47584285 tgtttaccctttataatttat 47584305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 48313488 - 48313432
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  48313488 agcttataagctatttttcagaagctattccaagtagcttttgagcttatagcttat 48313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 46879589 - 46879532
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  46879589 gagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 46879532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 1342867 - 1342997
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagct-------tatagcttatcatcttttcttccatttatacccttataattttatc 270  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||       ||||||||||||| ||||||||||||| || ||||||   ||||||    
T  1342867 agcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttatagcttatcatgttttcttccatttttatccttattgatttatc 1342966  T
Q  271 taaaaaccaatttta-cccattataatttat 300  Q
    ||||| ||| || || ||| |||||||||||    
T  1342967 taaaacccatttatacccctttataatttat 1342997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 28425679 - 28425619
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||    
T  28425679 cacgagcttataagttatttttcataagctattccaagtagtgtttgagcttatagcttat 28425619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 40106073 - 40106013
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  40106073 cacgagcttataaactatttttcagaagctattccaagtaacgtttgagcttatagtttat 40106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 48590801 - 48590861
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  48590801 cacgagcttataagttatttttcaaaagctattcaaagtagcgtttgagcttatagcttat 48590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 49148419 - 49148479
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  49148419 cacgagcttatgagctatttttcagaagctattccaagcagcgtttgagcttatagtttat 49148479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 32168931 - 32169030
Alignment:
Q  199 aagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattt 298  Q
    ||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| |||| || ||||  ||| ||||| |||||| |||||    
T  32168931 aagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattatttcatttaaattccatttttatccattacaattt 32169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 38531249 - 38531191
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  38531249 acgagcttataagctatttttcagaagttatt-caagtagcgtttgagcttatagcttat 38531191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 39698930 - 39698984
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagctt 232  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  39698930 agcttacaagctatttttcagaagctattccaagtagcatttgagcttatagctt 39698984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 791398 - 791341
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||    
T  791398 gagcttataagctatttttcagatgctattacaagtagcgtttgaacttatagcttat 791341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 19757581 - 19757524
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||    
T  19757581 gagcttataagctatttttcaaaagctacttcaagtagcgtttgagcttatagcttat 19757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 9485803 - 9485863
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| |||||||| || ||| | ||||||||||||||||||    
T  9485803 cacgagcttataagctatttttcaaaagctatttcaagtatcatttgagcttatagcttat 9485863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 27655859 - 27655795
Alignment:
Q  76 gtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttga 140  Q
    |||||||||||||| |  ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  27655859 gtctgtttggtaaggttcctaaatgagcttatagcttatagcttttagcttataagctcgtttga 27655795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 40893463 - 40893519
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||    
T  40893463 agcttataagctattttttagaacctatttcaagtagcgtttgagcttatagcttat 40893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 288
Target Start/End: Complemental strand, 7884736 - 7884638
Alignment:
Q  189 tatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttaccc 288  Q
    |||||||  |||||||||| | ||||||||||||||||||||||||  | |||||||||| || ||||||||| ||||||| | || |||| ||||||||    
T  7884736 tatttttgtgaagctattctaagtagcgtttgagcttatagcttat-tttttttcttccacttttacccttattattttatttgaataccagttttaccc 7884638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 33609143 - 33609064
Alignment:
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataatttat 300  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||  ||||| |||  ||||||| |||||||||||    
T  33609143 agcttatagcttatcatcttttgtcccatttttacccttattattttaattaaaacccatgtttaccctttataatttat 33609064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 38481375 - 38481421
Alignment:
Q  182 tataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38481375 tataagctatttttcaaaagctattccaagtagcgtttgagcttata 38481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 36612172 - 36612119
Alignment:
Q  181 ttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||| |||||||| | || ||||||||||||||||||||||||    
T  36612172 ttataagctattttttagaagctacttcaagtagcgtttgagcttatagcttat 36612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 11466225 - 11466161
Alignment:
Q  76 gtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttga 140  Q
    |||||||||||||| |  |||||||||||||||  ||||||||  ||||||||||||||||||||    
T  11466225 gtctgtttggtaaggttcctaaatgagcttatagtttatagcttttagcttataagctcgtttga 11466161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 19757704 - 19757637
Alignment:
Q  74 gggtctgtttggtaagatcactaaatgagcttataccttatagctaatagcttataagctcgtttgac 141  Q
    ||||||||||| ||| |||   ||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  19757704 gggtctgtttgataacatccaaaaaagagcttataacttatagctaatagcttataagctcgtctgac 19757637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 48620544 - 48620598
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttata 228  Q
    ||||||||||||| ||||||||||||| ||||| || ||||||||||||| ||||    
T  48620544 cacgagcttataaactatttttcagaaactatttcaagtagcgtttgagcatata 48620598  T

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Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 21316648 - 21316611
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagc 215  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21316648 agcttataagctatttttcagaagctattccaagtagc 21316611  T

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Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 292
Target Start/End: Original strand, 48729547 - 48729667
Alignment:
Q  172 accacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatct 271  Q
    ||||||||||||||   ||||||  ||| |||||| || ||||| |||||||||||| |||||  | |||||||||| || ||||||||    ||||||     
T  48729547 accacgagcttatatcttattttctagacgctatttcaagtagcatttgagcttataacttattgttttttcttccacttttacccttactgatttatca 48729646  T
Q  272 aaaaaccaattttacccatta 292  Q
    |||| ||| ||||||||||||    
T  48729647 aaaatccatttttacccatta 48729667  T

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Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 24170866 - 24170923
Alignment:
Q  177 gagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||   ||||||| |||| | ||||||||||| |||||    
T  24170866 gagcttataagctatttttcagacattattccaagtagtgcttgagcttataacttat 24170923  T

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Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 40893384 - 40893450
Alignment:
Q  120 atagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctc-ttaccacgagcttata 185  Q
    |||||||||||| |||||||||       |||||||||||||||| |||| ||||||||||||||||    
T  40893384 atagcttataagttcgtttgacaaaaaaagttctgtttggtaatgatctctttaccacgagcttata 40893450  T

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Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 242
Target Start/End: Complemental strand, 12651108 - 12651080
Alignment:
Q  214 gcgtttgagcttatagcttatcatctttt 242  Q
    |||||||||||||||||||||||||||||    
T  12651108 gcgtttgagcttatagcttatcatctttt 12651080  T

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Target: scaffold0087 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 53081 - 52989
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  53081 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 52989  T

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Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 84342 - 84456
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattttatctaa 273  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||| | |||||||   ||||| |||||    
T  84342 cacgagcttataaactatttttcagaagctatttcaagtagcgtttgagcttataacttatcattttttcttccatctctacccttgctattttctctaa 84441  T
Q  274 aaaccaattttaccc 288  Q
    || |||||| |||||    
T  84442 aatccaattctaccc 84456  T

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Target: scaffold0016; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 93446 - 93386
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  93446 cacgagcttataagctatttttcataagctattccaagtagcgtttgagcttatagcttat 93386  T

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Target: scaffold0027 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 234
Target Start/End: Complemental strand, 41899 - 41765
Alignment:
Q  100 gagcttataccttatagctaatagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctcttaccacgagcttataagctatttttcaga 199  Q
    |||||| || ||| ||||| ||||||||||||||||||||||       | ||||||||||||   | | | |||| |||||||||||||||||||||||    
T  41899 gagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataagctatttttcaga 41800  T
Q  200 agctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  41799 agctattccaagtagcgtttgagcttatagcttat 41765  T

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Target: scaffold0362 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 5494 - 5586
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| || ||||||||| ||||    
T  5494 cacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 5586  T

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Target: scaffold1360 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 1251 - 1174
Alignment:
Q  221 agcttatagcttatcatcttttcttccatttatacccttataattttatctaaaaaccaattttacccattataattt 298  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  1251 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttacccattataattt 1174  T

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Target: scaffold1632 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 97 - 37
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  97 cacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37  T

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Target: scaffold0418 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 4578 - 4665
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttat 261  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||| |  ||||| |||||||||    
T  4578 cacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttat 4665  T

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Target: scaffold0197 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 28132 - 28076
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28132 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 30237 - 30145
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttatcatcttttcttccatttatacccttataattt 266  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||  ||||||| || || ||||||||| ||||    
T  30237 cacgagtttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcacattttctttcaattttacccttattattt 30145  T

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Target: scaffold0116 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22681 - 22741
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  22681 cacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagcttat 22741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 126820 - 126760
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  126820 cacgagcttataagctatttttcagaagctattccaagtagcgcttgagcttatagcttat 126760  T

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Target: scaffold0011 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 63930 - 63990
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  63930 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttat 63990  T

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Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 431344 - 431404
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  431344 cacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 119299 - 119239
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||    
T  119299 cacgagcttataagctatttttcagatcctattccaagtagagtttgagcttatagcttat 119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 12776 - 12717
Alignment:
Q  175 acgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  12776 acgagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagcttat 12717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 7143 - 7203
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  7143 cacgagcttataagctattttttagaagctattccaagtagtgtttgagcttatagcttat 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 192099 - 192159
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  192099 cacgagcttataagctatttttgagaagctattccaagtagcttttgagcttatagcttat 192159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 72821 - 72765
Alignment:
Q  178 agcttataagctatttttcagaagctattccaggtagcgtttgagcttatagcttat 234  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||    
T  72821 agcttataagctattttttagaacctatttcaagtagcgtttgagcttatagcttat 72765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 72900 - 72834
Alignment:
Q  120 atagcttataagctcgtttgacnnnnnnngttctgtttggtaatggtctc-ttaccacgagcttata 185  Q
    |||||||||||| |||||||||       |||||||||||||||| |||| ||||||||||||||||    
T  72900 atagcttataagttcgtttgacaaaaaaagttctgtttggtaatgatctctttaccacgagcttata 72834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 10849 - 10901
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattccaggtagcgtttgagctta 226  Q
    |||||| ||||||||||||||||||| |||||||||  |||||||||||||||    
T  10849 cacgagtttataagctatttttcagacgctattccaaatagcgtttgagctta 10901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 27194 - 27159
Alignment:
Q  174 cacgagcttataagctatttttcagaagctattcca 209  Q
    ||||||||||||||||||||||||||||||||||||    
T  27194 cacgagcttataagctatttttcagaagctattcca 27159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 11846 - 11901
Alignment:
Q  212 tagcgtttgagcttatagcttatcatcttttcttccatttatacccttataatttt 267  Q
    ||||||||||||||||| |||||||| |||| |||||||| || |||||| |||||    
T  11846 tagcgtttgagcttataacttatcattttttattccatttttatccttatcatttt 11901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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