View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13218_low_41 (Length: 226)
Name: NF13218_low_41
Description: NF13218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13218_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 2034630 - 2034437
Alignment:
| Q |
15 |
cacagataatacatactccagacaagaggtataattaacttttggtattattgctggaaacttcatcttttcaatttgcattcatgatgactgatatatg |
114 |
Q |
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| T |
2034630 |
cacagataatacatactccagacaagaggtataattaacttttggtattattgctggaaacttcatcttttcaatttgcattcatgataactgatatatg |
2034531 |
T |
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| Q |
115 |
taacacacaatcattggcacttgataggtattgaaaatggagaaagaggttctaaatcttctgcattttcaattagctgttcccacaatcaaga |
208 |
Q |
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| T |
2034530 |
taacacacaatcattggcacttgataggtattgaaaatggagaaagaggttctaaatcttctgcattttcaattagctgttcccacaatcaaga |
2034437 |
T |
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