View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13219_low_14 (Length: 252)

Name: NF13219_low_14
Description: NF13219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13219_low_14
NF13219_low_14
[»] chr2 (7 HSPs)
chr2 (21-236)||(4974826-4975035)
chr2 (21-236)||(4992734-4992943)
chr2 (21-69)||(12343060-12343108)
chr2 (21-73)||(10173370-10173422)
chr2 (23-70)||(34230444-34230491)
chr2 (21-66)||(41113528-41113573)
chr2 (21-73)||(41086580-41086632)
[»] chr3 (6 HSPs)
chr3 (21-73)||(37123620-37123672)
chr3 (21-73)||(28937503-28937555)
chr3 (21-74)||(14755052-14755105)
chr3 (21-74)||(33143741-33143794)
chr3 (41-73)||(14879676-14879708)
chr3 (21-61)||(32010012-32010052)
[»] chr5 (6 HSPs)
chr5 (21-74)||(33258670-33258723)
chr5 (21-73)||(14302234-14302286)
chr5 (33-73)||(33110000-33110040)
chr5 (21-72)||(26045754-26045805)
chr5 (21-73)||(25992249-25992301)
chr5 (21-69)||(10174923-10174971)
[»] chr4 (7 HSPs)
chr4 (21-66)||(22810951-22810996)
chr4 (23-70)||(19311158-19311205)
chr4 (23-74)||(19673336-19673387)
chr4 (23-74)||(19815014-19815065)
chr4 (21-72)||(49747768-49747818)
chr4 (34-67)||(48098580-48098613)
chr4 (21-69)||(38637024-38637072)
[»] chr1 (4 HSPs)
chr1 (21-73)||(32882605-32882657)
chr1 (21-71)||(34775112-34775162)
chr1 (21-69)||(10785252-10785300)
chr1 (21-69)||(31290810-31290858)
[»] chr8 (5 HSPs)
chr8 (21-75)||(43312429-43312483)
chr8 (21-66)||(10248357-10248402)
chr8 (21-72)||(17656526-17656578)
chr8 (23-72)||(2273838-2273887)
chr8 (21-66)||(22325886-22325931)
[»] scaffold0063 (1 HSPs)
scaffold0063 (22-71)||(58369-58418)
[»] scaffold1384 (1 HSPs)
scaffold1384 (21-73)||(1446-1498)
[»] chr6 (1 HSPs)
chr6 (40-74)||(3880405-3880439)
[»] chr7 (3 HSPs)
chr7 (21-69)||(24324588-24324637)
chr7 (33-65)||(6716539-6716571)
chr7 (21-65)||(43235601-43235645)
[»] scaffold0050 (1 HSPs)
scaffold0050 (21-69)||(36950-36997)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 4975035 - 4974826
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccatatattgattggatgtgtcacaccatgtcataatttttacatcccaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4975035 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcccacacgatatattgattggatgtgtcacaccatgtcataatttttacatcccaa 4974936  T
Q  121 acttcatcaactaaaatacaatttacatttaggacc-cccctaaacaatacaacataacacactttccatttaatcataaatagctaattaaggtattta 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||    
T  4974935 acttcatcaactaaaatacaatttacatttaggaccccccctaaaca-------ataacacacttttcatttaatcataaatagctaattaaggtattta 4974843  T
Q  220 atgatgaagacttttac 236  Q
    |||||||||||||||||    
T  4974842 atgatgaagacttttac 4974826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 4992943 - 4992734
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccatatattgattggatgtgtcacaccatgtcataatttttacatcccaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4992943 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcccacacgatatattgattggatgtgtcacaccatgtcataatttttacatcccaa 4992844  T
Q  121 acttcatcaactaaaatacaatttacatttaggacc-cccctaaacaatacaacataacacactttccatttaatcataaatagctaattaaggtattta 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||    
T  4992843 acttcatcaactaaaatacaatttacatttaggaccccccctaaaca-------ataacacacttttcatttaatcataaatagctaattaaggtattta 4992751  T
Q  220 atgatgaagacttttac 236  Q
    |||||||||||||||||    
T  4992750 atgatgaagacttttac 4992734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 12343108 - 12343060
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  12343108 taaaacagactccttcacgaaaacgacctctgtaaaaacgatatccaac 12343060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 10173370 - 10173422
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||    
T  10173370 taaaacagacgtcttcatgaaaacgactactgtaaaaacgatatacaacacca 10173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 34230491 - 34230444
Alignment:
Q  23 aaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaaca 70  Q
    |||||||||  | |||||||||||||||| ||||||||||||||||||    
T  34230491 aaacagactcttccacgaaaacgaccactataaaaacgatatccaaca 34230444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 41113528 - 41113573
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 66  Q
    ||||||||||| ||||||||||||||| | |||| |||||||||||    
T  41113528 taaaacagactccttcacgaaaacgactattgtacaaacgatatcc 41113573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 41086580 - 41086632
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    ||||||||||  ||| |||||| |||||||| |||||||||||||||| ||||    
T  41086580 taaaacagaccccttaacgaaagcgaccactctaaaaacgatatccaatacca 41086632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 37123672 - 37123620
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37123672 taaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 37123620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 28937503 - 28937555
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    ||||||||||  ||||||||||  |||||||||||||||||||||||| ||||    
T  28937503 taaaacagaccccttcacgaaagtgaccactgtaaaaacgatatccaatacca 28937555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 14755052 - 14755105
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    ||||||||||  |||||||||| |||||| ||||||||||||||| || |||||    
T  14755052 taaaacagaccccttcacgaaagcgaccattgtaaaaacgatatctaataccat 14755105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 33143741 - 33143794
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    ||||||| ||| |||||||||||| ||||||| | |||||||||||||| ||||    
T  33143741 taaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccat 33143794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 14879708 - 14879676
Alignment:
Q  41 aaacgaccactgtaaaaacgatatccaacacca 73  Q
    |||||||||||| ||||||||||||||||||||    
T  14879708 aaacgaccactgaaaaaacgatatccaacacca 14879676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 32010052 - 32010012
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacga 61  Q
    ||||||||||| |||||||||||||||| ||| ||||||||    
T  32010052 taaaacagactccttcacgaaaacgacctctgaaaaaacga 32010012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 33258670 - 33258723
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||| |||||    
T  33258670 taaaacagatctcttcacgaaagcgaccactgtaaaaacgatatccaataccat 33258723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 14302234 - 14302286
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    ||||||||| | |||| |||||||||||| |||||||||||||||||||||||    
T  14302234 taaaacagattccttcgcgaaaacgaccaatgtaaaaacgatatccaacacca 14302286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 33110000 - 33110040
Alignment:
Q  33 cttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  33110000 cttcacgaaaacgaccactgtaaaaacgatatccaatacca 33110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 26045754 - 26045805
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacc 72  Q
    ||||||||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  26045754 taaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacc 26045805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 25992301 - 25992249
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    ||||||||||  |||||||||| | ||||||||||||||||||||||| ||||    
T  25992301 taaaacagaccccttcacgaaagcaaccactgtaaaaacgatatccaatacca 25992249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 10174971 - 10174923
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    ||||||||||| ||||   ||||||||||| ||||||||||||||||||    
T  10174971 taaaacagactccttctaaaaaacgaccacggtaaaaacgatatccaac 10174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 22810951 - 22810996
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 66  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||    
T  22810951 taaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcc 22810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 19311158 - 19311205
Alignment:
Q  23 aaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaaca 70  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||    
T  19311158 aaacagattccttcacgaaaacgagcactgtaaaaacgatatccaaca 19311205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 19673387 - 19673336
Alignment:
Q  23 aaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    |||||||| |||||||||||| ||||||||||||| | ||||||||||||||    
T  19673387 aaacagacgtcttcacgaaaatgaccactgtaaaagcaatatccaacaccat 19673336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 19815014 - 19815065
Alignment:
Q  23 aaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    |||||||| |||||||||||| |||||| ||||||| ||||||||| |||||    
T  19815014 aaacagacgtcttcacgaaaatgaccacggtaaaaatgatatccaataccat 19815065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 49747818 - 49747768
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacc 72  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||||||||    
T  49747818 taaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacacc 49747768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 48098613 - 48098580
Alignment:
Q  34 ttcacgaaaacgaccactgtaaaaacgatatcca 67  Q
    ||||| ||||||||||||||||||||||||||||    
T  48098613 ttcacaaaaacgaccactgtaaaaacgatatcca 48098580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 38637024 - 38637072
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    ||||||| ||| |||||||||||| ||| ||||||||| ||||||||||    
T  38637024 taaaacaaactccttcacgaaaacaaccgctgtaaaaatgatatccaac 38637072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 32882657 - 32882605
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    |||||| |||| |||||||||||||| ||||||||| ||||||||||||||||    
T  32882657 taaaactgactccttcacgaaaacgagcactgtaaacacgatatccaacacca 32882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 34775162 - 34775112
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacac 71  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||| ||||    
T  34775162 taaaacagactccttcacgaaaacgacaactgtaaaaacgaaatcccacac 34775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 10785252 - 10785300
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    ||||||||||| |||||||||||||||  ||| ||||||||||||||||    
T  10785252 taaaacagactccttcacgaaaacgacatctgaaaaaacgatatccaac 10785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 31290810 - 31290858
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    |||| |||||| |||| ||||||||||||||||||||| |||| |||||    
T  31290810 taaatcagactccttcgcgaaaacgaccactgtaaaaatgatagccaac 31290858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 43312429 - 43312483
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccata 75  Q
    |||| |||||| || ||| ||||||||||||||||||||||||||| ||||||||    
T  43312429 taaatcagactcctacacaaaaacgaccactgtaaaaacgatatcccacaccata 43312483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 10248357 - 10248402
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 66  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  10248357 taaaacaaactccttcacgaaaacgaccactgtaaaaacgacatcc 10248402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 17656526 - 17656578
Alignment:
Q  21 taaaacagacttcttcacgaaaa-cgaccactgtaaaaacgatatccaacacc 72  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||    
T  17656526 taaaacagactccttcaagaaaaacgaccactgcaaaaacgatatccaacacc 17656578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 2273838 - 2273887
Alignment:
Q  23 aaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacc 72  Q
    ||||||||| ||||||||||||| | || ||||||||||||||| |||||    
T  2273838 aaacagactccttcacgaaaacgccaaccgtaaaaacgatatcccacacc 2273887  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 22325886 - 22325931
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 66  Q
    ||||||||||| ||| || |||||||||| ||||||||||||||||    
T  22325886 taaaacagactccttaacaaaaacgaccattgtaaaaacgatatcc 22325931  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 58418 - 58369
Alignment:
Q  22 aaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacac 71  Q
    |||||||||| ||||||||||||||||| |||||||  ||||||||||||    
T  58418 aaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacac 58369  T

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Target: scaffold1384 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 1446 - 1498
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaacacca 73  Q
    |||||| |||| || ||||| ||| ||||||||||||||||||||||||||||    
T  1446 taaaactgactcctacacgagaacaaccactgtaaaaacgatatccaacacca 1498  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 3880405 - 3880439
Alignment:
Q  40 aaaacgaccactgtaaaaacgatatccaacaccat 74  Q
    |||||||||||| ||||||||||||||||||||||    
T  3880405 aaaacgaccactataaaaacgatatccaacaccat 3880439  T

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Target: chr7 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 24324588 - 24324637
Alignment:
Q  21 taaaacagacttcttcacgaaaa-cgaccactgtaaaaacgatatccaac 69  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||||||||    
T  24324588 taaaacagactccttcacgaaaaacgaccattgtaagaacgatatccaac 24324637  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 6716539 - 6716571
Alignment:
Q  33 cttcacgaaaacgaccactgtaaaaacgatatc 65  Q
    |||||||||||||||||||||||||||| ||||    
T  6716539 cttcacgaaaacgaccactgtaaaaacggtatc 6716571  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 43235645 - 43235601
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatc 65  Q
    |||||||||||  |||||||||||| |||| ||||||||||||||    
T  43235645 taaaacagactcattcacgaaaacggccaccgtaaaaacgatatc 43235601  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 36997 - 36950
Alignment:
Q  21 taaaacagacttcttcacgaaaacgaccactgtaaaaacgatatccaac 69  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||    
T  36997 taaaacagactccttcacgaaacc-accactgtaaaaacgacatccaac 36950  T

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