View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1321_low_16 (Length: 287)
Name: NF1321_low_16
Description: NF1321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1321_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 64 - 241
Target Start/End: Original strand, 36344092 - 36344269
Alignment:
| Q |
64 |
tcaacagtttcccactttgttcagaacatattctttccctcacacgaacaaaaaagtaacaaggaaccatctcataaagaaactgcaaaggaaagagcca |
163 |
Q |
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| T |
36344092 |
tcaacagtttcccactttgttcagaacatattctttccctcacacgaacaaaaaagtaacaaggaaccatctcataaagaaactgcaaaggaaagagcca |
36344191 |
T |
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| Q |
164 |
tcctaaaaaagttttgttcattcaatgtggtaattcgacatcctgcaaatccatttaatgccattaacatccctatga |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36344192 |
tcctaaaaaagttttgttcattcaatgtggtaattcgacatcctgcaaatccatttaatgccattaacatccttatga |
36344269 |
T |
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