View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1321_low_22 (Length: 259)
Name: NF1321_low_22
Description: NF1321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1321_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8244239 - 8244021
Alignment:
| Q |
1 |
tagaatgttattcccacggcggtccaatagccgcaagtgttggcctagcggttgctgctcgcaacacgggtgcaagacacgtgtgcatagtcctagacga |
100 |
Q |
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| T |
8244239 |
tagaatgttactcccacggcggtccaatagccgcaagtgttggcctagcggttgctgctcgcaacacgggtgcaagacacgtgtgcatagtcccagatga |
8244140 |
T |
|
| Q |
101 |
agggtcaagattacaatacacaaaagccctagccgagatgggtgtaaccccgccaccggagatagttcatggcgaagcgcagacggtgatcaaaagtctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
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| T |
8244139 |
agggtcaagattacaatacacaaaagccctagccgagatgggtgtaaccccgccaccggagatagttcacggtgaagcgcagacggtgatcaaaagtctt |
8244040 |
T |
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| Q |
201 |
gatgggttggatattcttg |
219 |
Q |
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|||||||||||| |||||| |
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| T |
8244039 |
gatgggttggattttcttg |
8244021 |
T |
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