View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1321_low_23 (Length: 251)
Name: NF1321_low_23
Description: NF1321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1321_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 36734907 - 36734685
Alignment:
| Q |
29 |
aatgtttagattagaagacaagcacaacactttaagcatgagttattgatatttactttaagcatataaaaaatttagattagaaagtcaagtgatccaa |
128 |
Q |
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| T |
36734907 |
aatgtttagattagaagacaagcacaacactttaagcatgagttattgatatttactttaagcatataaaaaatttagattagaaagtcaagtgatccaa |
36734808 |
T |
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| Q |
129 |
agagaaaaggcatttgtgatctaaaatatgggcgcagtaagttaagtatgattgatgattgttttaaaaagaatctattatcgtatttacttaaaaagtt |
228 |
Q |
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|||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36734807 |
agagaaaaagcatttgtgatctaaaatatggacgcagtaagttaagtatgatcgatgattgttttaaaaagaatctattatcgtatttacttaaagagtt |
36734708 |
T |
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| Q |
229 |
agtgcaacaattattatagtgta |
251 |
Q |
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|||||||||||||||| |||||| |
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| T |
36734707 |
agtgcaacaattattacagtgta |
36734685 |
T |
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