View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13220_high_4 (Length: 404)

Name: NF13220_high_4
Description: NF13220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13220_high_4
NF13220_high_4
[»] chr6 (26 HSPs)
chr6 (1-376)||(22735686-22736064)
chr6 (167-261)||(4844153-4844247)
chr6 (193-277)||(9031760-9031844)
chr6 (170-266)||(22730695-22730792)
chr6 (170-266)||(30833022-30833118)
chr6 (170-241)||(7233995-7234066)
chr6 (187-266)||(20858394-20858473)
chr6 (226-266)||(8176001-8176041)
chr6 (226-266)||(34524880-34524920)
chr6 (187-277)||(5134445-5134536)
chr6 (226-277)||(17176143-17176194)
chr6 (148-210)||(16110964-16111026)
chr6 (229-266)||(8309169-8309206)
chr6 (170-266)||(20149973-20150070)
chr6 (170-266)||(22182762-22182859)
chr6 (148-266)||(22389724-22389840)
chr6 (170-266)||(26669653-26669749)
chr6 (187-266)||(32394030-32394109)
chr6 (228-266)||(1488093-1488131)
chr6 (193-266)||(2945600-2945674)
chr6 (232-277)||(6219348-6219393)
chr6 (173-266)||(30668181-30668274)
chr6 (226-262)||(8253640-8253676)
chr6 (170-266)||(9051285-9051381)
chr6 (226-266)||(10455747-10455787)
chr6 (226-277)||(24470441-24470493)
[»] chr8 (25 HSPs)
chr8 (148-266)||(216119-216237)
chr8 (148-266)||(692679-692797)
chr8 (148-266)||(696888-697006)
chr8 (148-266)||(729742-729860)
chr8 (148-266)||(853637-853755)
chr8 (167-266)||(220353-220452)
chr8 (167-266)||(689508-689607)
chr8 (167-266)||(733976-734075)
chr8 (167-266)||(857872-857971)
chr8 (141-266)||(12560037-12560161)
chr8 (193-266)||(39432345-39432418)
chr8 (170-258)||(22847256-22847344)
chr8 (170-265)||(11900572-11900666)
chr8 (226-266)||(14011088-14011128)
chr8 (226-266)||(26657861-26657901)
chr8 (227-283)||(41793024-41793079)
chr8 (226-265)||(16621550-16621589)
chr8 (170-215)||(25408690-25408735)
chr8 (168-265)||(36593200-36593297)
chr8 (170-211)||(39208863-39208904)
chr8 (226-267)||(43554453-43554494)
chr8 (226-266)||(4955033-4955073)
chr8 (226-266)||(7345433-7345473)
chr8 (226-266)||(29937215-29937255)
chr8 (167-247)||(42711184-42711264)
[»] chr4 (29 HSPs)
chr4 (170-266)||(49039439-49039535)
chr4 (170-266)||(41492493-41492588)
chr4 (170-266)||(54264933-54265029)
chr4 (167-266)||(21023343-21023441)
chr4 (167-266)||(49743367-49743466)
chr4 (167-237)||(47416502-47416572)
chr4 (173-266)||(35230292-35230385)
chr4 (226-266)||(20610744-20610784)
chr4 (170-266)||(54854173-54854269)
chr4 (170-277)||(12585553-12585660)
chr4 (226-264)||(20166323-20166361)
chr4 (226-266)||(12820455-12820496)
chr4 (148-277)||(34370917-34371046)
chr4 (226-266)||(1589207-1589247)
chr4 (226-266)||(4419736-4419776)
chr4 (226-262)||(38657549-38657585)
chr4 (187-266)||(48512203-48512283)
chr4 (170-261)||(6202613-6202704)
chr4 (171-266)||(36045835-36045930)
chr4 (170-261)||(37997840-37997931)
chr4 (226-261)||(42432018-42432053)
chr4 (193-266)||(9084763-9084837)
chr4 (170-266)||(24039893-24039985)
chr4 (226-267)||(31480274-31480316)
chr4 (224-266)||(43049981-43050023)
chr4 (173-266)||(49319398-49319492)
chr4 (229-266)||(56913-56950)
chr4 (226-266)||(36008279-36008320)
chr4 (226-266)||(27921901-27921941)
[»] chr1 (47 HSPs)
chr1 (170-266)||(9768803-9768899)
chr1 (167-266)||(9769571-9769670)
chr1 (170-266)||(43020616-43020712)
chr1 (142-265)||(50575907-50576030)
chr1 (167-265)||(13941325-13941423)
chr1 (193-266)||(5684127-5684199)
chr1 (170-266)||(3341730-3341826)
chr1 (170-266)||(11238022-11238118)
chr1 (144-264)||(41677067-41677187)
chr1 (148-266)||(1721145-1721263)
chr1 (148-266)||(2643787-2643905)
chr1 (228-266)||(47645848-47645886)
chr1 (167-264)||(195051-195148)
chr1 (228-277)||(42801873-42801922)
chr1 (170-267)||(48565141-48565238)
chr1 (226-266)||(18003821-18003861)
chr1 (167-278)||(4511516-4511627)
chr1 (167-266)||(16182814-16182913)
chr1 (167-266)||(18646693-18646790)
chr1 (168-266)||(9410320-9410417)
chr1 (226-264)||(42908778-42908816)
chr1 (169-266)||(4605836-4605932)
chr1 (226-267)||(12489969-12490010)
chr1 (226-267)||(18976007-18976048)
chr1 (226-266)||(4146339-4146379)
chr1 (231-267)||(5862132-5862168)
chr1 (171-215)||(8890082-8890126)
chr1 (226-266)||(18179333-18179373)
chr1 (226-266)||(52961132-52961172)
chr1 (170-261)||(2903021-2903112)
chr1 (224-266)||(47939246-47939289)
chr1 (193-266)||(9527430-9527504)
chr1 (193-266)||(13870098-13870172)
chr1 (228-266)||(28417330-28417368)
chr1 (228-266)||(51917554-51917592)
chr1 (224-265)||(9074002-9074043)
chr1 (225-266)||(37262154-37262195)
chr1 (169-209)||(1576114-1576154)
chr1 (226-266)||(7015737-7015777)
chr1 (226-266)||(7906376-7906416)
chr1 (226-266)||(9004351-9004391)
chr1 (187-266)||(18923896-18923975)
chr1 (226-266)||(23758303-23758343)
chr1 (234-266)||(28284008-28284040)
chr1 (226-266)||(33176153-33176193)
chr1 (170-242)||(41182803-41182874)
chr1 (226-266)||(47141856-47141896)
[»] chr3 (32 HSPs)
chr3 (170-266)||(40160740-40160836)
chr3 (166-265)||(4045624-4045723)
chr3 (167-266)||(28951871-28951970)
chr3 (226-266)||(16874240-16874280)
chr3 (174-266)||(24130564-24130656)
chr3 (167-266)||(3993698-3993797)
chr3 (167-266)||(4010009-4010108)
chr3 (176-266)||(3973307-3973397)
chr3 (176-266)||(3996479-3996569)
chr3 (148-206)||(6054197-6054255)
chr3 (229-267)||(12143460-12143498)
chr3 (227-265)||(51017796-51017834)
chr3 (226-266)||(19137624-19137664)
chr3 (226-266)||(24160578-24160618)
chr3 (230-266)||(30745785-30745821)
chr3 (169-220)||(17262270-17262321)
chr3 (173-260)||(19149435-19149522)
chr3 (167-266)||(23025902-23026001)
chr3 (231-266)||(33533208-33533243)
chr3 (170-261)||(34407084-34407175)
chr3 (227-266)||(51412041-51412080)
chr3 (226-264)||(12236606-12236644)
chr3 (170-260)||(16985031-16985121)
chr3 (148-266)||(31680737-31680854)
chr3 (187-266)||(6951802-6951880)
chr3 (232-261)||(46969008-46969037)
chr3 (226-266)||(23237367-23237407)
chr3 (170-254)||(27119293-27119377)
chr3 (187-255)||(40996882-40996950)
chr3 (187-266)||(41767779-41767859)
chr3 (226-265)||(43774190-43774230)
chr3 (226-266)||(43911619-43911659)
[»] chr2 (26 HSPs)
chr2 (167-266)||(18065259-18065358)
chr2 (167-266)||(36386105-36386203)
chr2 (169-266)||(2057486-2057581)
chr2 (170-266)||(1244574-1244670)
chr2 (167-267)||(29896152-29896252)
chr2 (170-256)||(16310016-16310101)
chr2 (228-265)||(44132615-44132652)
chr2 (170-266)||(18089734-18089830)
chr2 (170-266)||(22355088-22355184)
chr2 (170-266)||(34107279-34107375)
chr2 (226-266)||(36277752-36277792)
chr2 (226-257)||(10602019-10602050)
chr2 (228-267)||(19352870-19352909)
chr2 (185-264)||(32288383-32288462)
chr2 (227-274)||(32944059-32944106)
chr2 (213-260)||(34376553-34376600)
chr2 (224-266)||(6496444-6496486)
chr2 (170-260)||(29713083-29713173)
chr2 (226-267)||(13294434-13294475)
chr2 (168-209)||(28679879-28679920)
chr2 (226-274)||(32527127-32527176)
chr2 (148-200)||(2394945-2394997)
chr2 (226-266)||(5772865-5772905)
chr2 (187-266)||(11133080-11133160)
chr2 (226-262)||(14307744-14307780)
chr2 (141-261)||(39118403-39118523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (169-258)||(19388-19477)
[»] chr5 (23 HSPs)
chr5 (173-266)||(38040271-38040363)
chr5 (170-266)||(7147013-7147109)
chr5 (224-265)||(42781642-42781683)
chr5 (226-266)||(11246544-11246584)
chr5 (226-282)||(25660901-25660957)
chr5 (170-266)||(31556823-31556919)
chr5 (226-266)||(36742017-36742057)
chr5 (168-266)||(42553133-42553230)
chr5 (226-266)||(6806690-6806731)
chr5 (167-268)||(28768600-28768701)
chr5 (185-265)||(31907657-31907737)
chr5 (226-266)||(35813292-35813332)
chr5 (187-265)||(9963421-9963500)
chr5 (226-261)||(17557040-17557075)
chr5 (224-267)||(38040140-38040183)
chr5 (227-266)||(40250228-40250267)
chr5 (180-266)||(16969672-16969758)
chr5 (226-279)||(34325257-34325310)
chr5 (226-262)||(20186875-20186911)
chr5 (167-219)||(22687872-22687924)
chr5 (170-266)||(31280374-31280469)
chr5 (193-245)||(38230222-38230273)
chr5 (167-247)||(39684262-39684342)
[»] chr7 (30 HSPs)
chr7 (170-266)||(10020463-10020559)
chr7 (226-266)||(7465471-7465511)
chr7 (193-261)||(23799310-23799378)
chr7 (226-266)||(24427368-24427408)
chr7 (170-266)||(35498403-35498498)
chr7 (170-246)||(39524713-39524788)
chr7 (191-266)||(8147201-8147276)
chr7 (226-277)||(35195837-35195888)
chr7 (185-266)||(7392315-7392396)
chr7 (168-264)||(11808045-11808142)
chr7 (229-266)||(17305443-17305480)
chr7 (193-266)||(37410498-37410571)
chr7 (226-267)||(37995596-37995636)
chr7 (170-266)||(1649157-1649253)
chr7 (170-266)||(43635593-43635689)
chr7 (187-266)||(10474523-10474602)
chr7 (148-207)||(26734243-26734302)
chr7 (170-257)||(32309142-32309229)
chr7 (226-277)||(38032905-38032956)
chr7 (193-266)||(41139091-41139165)
chr7 (228-265)||(19924773-19924810)
chr7 (226-266)||(21285403-21285444)
chr7 (228-277)||(27726421-27726470)
chr7 (193-266)||(32814832-32814905)
chr7 (226-267)||(43209405-43209446)
chr7 (226-266)||(14772385-14772425)
chr7 (226-266)||(15222837-15222877)
chr7 (226-265)||(20527479-20527519)
chr7 (170-266)||(43712307-43712403)
chr7 (227-283)||(45267977-45268033)
[»] scaffold0712 (1 HSPs)
scaffold0712 (226-266)||(4525-4565)
[»] scaffold0709 (1 HSPs)
scaffold0709 (226-266)||(4545-4585)
[»] scaffold0168 (1 HSPs)
scaffold0168 (226-266)||(34083-34123)
[»] scaffold0219 (1 HSPs)
scaffold0219 (228-282)||(21016-21070)
[»] scaffold0126 (1 HSPs)
scaffold0126 (226-266)||(25011-25051)
[»] scaffold0119 (1 HSPs)
scaffold0119 (170-266)||(1044-1140)
[»] scaffold0054 (1 HSPs)
scaffold0054 (170-266)||(67166-67262)


Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 22736064 - 22735686
Alignment:
Q  1 atataaaatacaattacaagtcacaatgcaacaacccaagtccaaaaccaaatataaaaaacaagccaacatcaactcaactcatatcctactaacacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22736064 atataaaatacaattacaagtcacaatgcaacaacccaagtccaaa-cgaaatataaaaaacaagccaacatcaacgcaactcatatcctactaacacaa 22735966  T
Q  101 ataatagagcataacccttaaaacaaataagatgtgtccactatttcttttgtc----agatagactatcggttagaattcacctttctcaaggtaaata 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||    ||||||||||  |||||||||||||||||| |||||||||||    
T  22735965 ataatagagcataacccttaaaacaaataagatgtgtccactattttttttttctttcagatagactactggttagaattcacctttcccaaggtaaata 22735866  T
Q  197 agtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatgtccactattaata 296  Q
    ||||||||||||| ||||||||||  | ||||||||||||||||| |||||||||| |||||||| |||| | |||| ||| ||||||| |||||||||     
T  22735865 agtgaggtgtccgggattcaaaccccagaccctgcatataacaatacatgtctctgtcaactgagttatgccaacggagacaatatgtcaactattaatg 22735766  T
Q  297 aagctcaatgctataaccaccatgcaacaattaatggaactctcatcttgttctttcttctgaattcaaaatactaaagt 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22735765 aagctcaatgctataaccaccatgcaacaattaatggaactctcatcttgttctttcttctgaattcaaaatactaaagt 22735686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 4844247 - 4844153
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    ||||||||||||| ||| ||||||| ||||||||||||||| ||| || |||||   | ||||||||||||||||||||||| ||||||||||||    
T  4844247 ggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtccctgccaactgag 4844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 9031844 - 9031760
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    |||||||| |||||| ||| |||||||   || ||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  9031844 aataagtggggtgtctgaggttcaaacttcaagccctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 22730695 - 22730792
Alignment:
Q  170 tagaattcacctt-tctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||| | | ||||| |||||||| |||||||||| ||| |||   |  |||||||||||||||||||||||||||||||||||| ||||    
T  22730695 tagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactgagttatg 22730792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 30833118 - 30833022
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| ||||| ||||||  |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| ||||||||||| |||||    
T  30833118 tagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatg 30833022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 7234066 - 7233995
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaat 241  Q
    |||||||||||||| ||||||| |||||||| |||||||||| ||||||||  |  ||||||||||||||||    
T  7234066 tagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagcccctgcatataacaat 7233995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 20858394 - 20858473
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| || ||||||||  |||| ||||  || ||||||||||||||||||||||| |||||||||||| ||||    
T  20858394 aaggtaaataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtccctgccaactgagttatg 20858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 8176041 - 8176001
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8176041 ccctgcatataacaatgcatgtctctgtcaactgagctatg 8176001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 34524920 - 34524880
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34524920 ccctgcatataacaatgcatgtccctgccaactgagctatg 34524880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 5134445 - 5134536
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggggac 277  Q
    ||||| |||||||| |||||| ||| ||| |||||    | |||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  5134445 aaggtgaataagtggggtgtctgaggttcgaaccgcggcctctgcatataacaatgcattgtctctgccaactgagctatgcttacggggac 5134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 17176194 - 17176143
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||| ||||    
T  17176194 ccctgcatataacaatgcatgtccctgtcaactgagctatgtttacgaggac 17176143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 16110964 - 16111026
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccga 210  Q
    |||||| |||||  |||| | ||||||||||||||| ||||| ||||||||||||||||||||    
T  16110964 ttttgtaagataacctattgattagaattcacctttttcaagataaataagtgaggtgtccga 16111026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 8309206 - 8309169
Alignment:
Q  229 tgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8309206 tgcatataacaatgcatgtccctgccaactgagctatg 8309169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 20149973 - 20150070
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtcc-gagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| ||||||| | | ||| ||||  || |||| |||||||||| ||| ||| || ||||||||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatg 20150070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 22182859 - 22182762
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtcc-gagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| ||||||| | | ||| ||||  || |||| |||||||||| ||| ||| || ||||||||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatg 22182762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 22389724 - 22389840
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tg 246  Q
    ||||||||| ||| ||| ||| |||||||||||||    ||||| |||||||| |||||||| ||||| |||| | | |||||||||||| |||||| ||    
T  22389724 ttttgtcaggtagtctagcggctagaattcaccttat--aaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattg 22389821  T
Q  247 tctctgccaactgagctatg 266  Q
    || || ||||||||||||||    
T  22389822 tc-ctaccaactgagctatg 22389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 26669653 - 26669749
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  |  |||| |||||||  ||||||||| || ||||||||||||||    
T  26669653 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatg 26669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 32394109 - 32394030
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| |||||||| |||||||| ||||||||||  || | |||||||  ||||| |||||| |||||||||||| ||||    
T  32394109 aaggtgaataagtggggtgtccgggattcaaacctcaacctctgcataagacaatacatgtccctgccaactgagttatg 32394030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 1488131 - 1488093
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  1488131 ctgcatataacaatgcatgtctctgccaattgagatatg 1488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 2945674 - 2945600
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    |||||||| |||||||||| ||  ||||   | ||||||||||||||||||| |||| |||||||||||||||||    
T  2945674 aataagtggggtgtccgaggtttgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatg 2945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 6219393 - 6219348
Alignment:
Q  232 atataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||    
T  6219393 atataataatgcatgtccctgccaactgagctatgttcacggggac 6219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 30668181 - 30668274
Alignment:
Q  173 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||| ||| | ||||| |||||||| ||||| || | ||| |||  | | |||||||||||| ||||||||||| ||||||||||| ||||    
T  30668181 aattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgccaactgagttatg 30668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 8253640 - 8253676
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagc 262  Q
    |||||||||||||||||||||||  ||||||||||||    
T  8253640 ccctgcatataacaatgcatgtccatgccaactgagc 8253676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 9051285 - 9051381
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| ||||| |||||   |||||||||| |||||| | ||| |||| ||  |||| ||||||||||||||| ||  |||||| |||||||||    
T  9051285 tagaattctcctttttcaagacgaataagtgagttgtccggggttcgaaccctagtccctacatataacaatgcatatccttgccaattgagctatg 9051381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 10455787 - 10455747
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||  ||||||||||| |||||    
T  10455787 ccctgcatataacaatgcatgttcctgccaactgaactatg 10455747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 24470441 - 24470493
Alignment:
Q  226 ccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggggac 277  Q
    ||||| |||||| ||||||| |||||||||||||||||||||  |||||||||    
T  24470441 ccctgtatataataatgcattgtctctgccaactgagctatgcttacggggac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 216119 - 216237
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  216119 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 216218  T
Q  248 ctctgccaactgagctatg 266  Q
    | |||||||||||||||||    
T  216219 ccctgccaactgagctatg 216237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 692679 - 692797
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  692679 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 692778  T
Q  248 ctctgccaactgagctatg 266  Q
    | |||||||||||||||||    
T  692779 ccctgccaactgagctatg 692797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 696888 - 697006
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  696888 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 696987  T
Q  248 ctctgccaactgagctatg 266  Q
    | |||||||||||||||||    
T  696988 ccctgccaactgagctatg 697006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 729742 - 729860
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  729742 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 729841  T
Q  248 ctctgccaactgagctatg 266  Q
    | |||||||||||||||||    
T  729842 ccctgccaactgagctatg 729860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 853637 - 853755
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  |||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||| | | | ||||||||||||||| ||||    
T  853637 ttttgtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgt 853736  T
Q  248 ctctgccaactgagctatg 266  Q
    | |||||||||||||||||    
T  853737 ccctgccaactgagctatg 853755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 220353 - 220452
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  220353 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 220452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 689508 - 689607
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  689508 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 733976 - 734075
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  733976 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 734075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 857872 - 857971
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||| | | | |||||||||||| |||||||| |||||||||||||||||    
T  857872 ggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatg 857971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 266
Target Start/End: Complemental strand, 12560161 - 12560037
Alignment:
Q  141 ctatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaa 240  Q
    |||||| ||||||||  ||| |||  || ||||||| |||||| ||||||||||||||||||||||  ||| ||| ||||  || |||||||||||||||    
T  12560161 ctattttttttgtcaagtagtctaatggctagaattgacctttttcaaggtaaataagtgaggtgtttgaggttcgaaccccaacccctgcatataacaa 12560062  T
Q  241 tgcatgtctctgccaactgagctatg 266  Q
    ||  |||  |||||||||||||||||    
T  12560061 tg-ttgttcctgccaactgagctatg 12560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 39432345 - 39432418
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| |||||| ||| ||| ||||  || |||||||||||||| |||||||| |||||||||||||||||    
T  39432345 aataagtggggtgtctgaggttcgaaccccaacccctgcatataacattgcatgtccctgccaactgagctatg 39432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 22847256 - 22847344
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaact 258  Q
    |||||||||||||| | ||||| ||||||||||||||  | | ||| ||||   | ||||||||||||||||||||||| |||||||||    
T  22847256 tagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 11900666 - 11900572
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||||||| ||||| | |||||||| ||| || | | ||||||||  || |||||||||||| |||||||||  ||||||||||||||||    
T  11900666 tagaattcacctttttcaagatgaataagtggggtatctgtg-ttcaaacctcaacccctgcatataataatgcatgttcctgccaactgagctat 11900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 14011088 - 14011128
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  14011088 ccctgcatataacaatgcatgtccctgccaactgaactatg 14011128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 26657901 - 26657861
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  26657901 ccctgcatataacaatgcatgtccctaccaactgagctatg 26657861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 41793024 - 41793079
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatg 283  Q
    |||||||||||||||||||||| ||||||| |||||||||   ||||||||||||||    
T  41793024 cctgcatataacaatgcatgtc-ctgccaattgagctatgctcacggggacgatatg 41793079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 16621589 - 16621550
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  16621589 ccctgcatataataatgcatatctctgccaactgagctat 16621550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 25408690 - 25408735
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattc 215  Q
    |||||||||||||  ||||||||||  |||||||||||||||||||    
T  25408690 tagaattcaccttcttcaaggtaaaacagtgaggtgtccgagattc 25408735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 36593297 - 36593200
Alignment:
Q  168 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||||| ||| | ||||| |||||||  | ||||  |||||| ||||  || | ||| ||||||||||||||||| || |||||||||||||    
T  36593297 gttagaattcacattttttaaggtgaataagttggatgtctaagattcgaaccccaacctctgtatataacaatgcatgtccctaccaactgagctat 36593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 39208863 - 39208904
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgag 211  Q
    |||||||||||||| | ||||| |||||||||||||||||||    
T  39208863 tagaattcacctttttaaaggtgaataagtgaggtgtccgag 39208904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 43554494 - 43554453
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||| |||||||||||| ||||| ||||||||||||||||||    
T  43554494 ccctacatataacaatggatgtcgctgccaactgagctatgt 43554453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 4955033 - 4955073
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||| |||||||||||||| |||| ||||    
T  4955033 ccctgcatataacaatacatgtctctgccaattgagttatg 4955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 7345473 - 7345433
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  7345473 ccctgcatataataatgcatgtccctgccaactgagttatg 7345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 29937255 - 29937215
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||| |||||| || ||||||||||||||    
T  29937255 ccctgcatataacaatacatgtccctaccaactgagctatg 29937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 42711264 - 42711184
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||||||| ||| |||||| ||||||||| | ||||||   |||||| | | | ||||||||||||||||| ||||    
T  42711264 ggttagaattcacatttttcaaggcaaataagtgggatgtccggagttcaaatcctgacccctgcatataacaatgtatgt 42711184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 49039439 - 49039535
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||  |  ||||||||||||||||||||||| |||||||||||||||||    
T  49039439 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagctatg 49039535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 41492493 - 41492588
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| |||||||||||||||| ||||||| || ||| ||||     |||||||||||| |||||||||| |||||||||||||||||    
T  41492493 tagaattcacctttttcaaggtaaataagtggggtgtcc-aggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatg 41492588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 54265029 - 54264933
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||| |||| ||||||| |||||||||||||| |||| ||  |||| | | |||| ||||||||||||||||| ||||||| ||||||||||    
T  54265029 tagaattcatctttttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacatataacaatgcatgtttctgccagctgagctatg 54264933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 21023343 - 21023441
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  || ||| | |||||||||||||||| ||||||||||||||||||    
T  21023343 ggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaaccccaaccccgg-atataacaatgcatgtttctgccaactgagctatg 21023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 49743466 - 49743367
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||| || |     |||||||||||| ||||||| || ||||||||||| |||||    
T  49743466 ggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatccctgccaactgaactatg 49743367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 47416572 - 47416502
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataa 237  Q
    ||||||||||||||||| |||| || |||||||| |||||||||||||| ||||  || ||||||||||||    
T  47416572 ggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcatataa 47416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 35230292 - 35230385
Alignment:
Q  173 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||| | |||||||||||||||| |||||||||| ||| ||||   | || |||||||| |||||||| || || ||||||||||||||    
T  35230292 aattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccctaccaactgagctatg 35230385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 20610784 - 20610744
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  20610784 ccctgcatataacaatgcatgtccctgccaactgagctatg 20610744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 54854173 - 54854269
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||| ||||||| |||||||| | |||||| | ||| ||||  |  ||||||||||||  ||||||||| |||||||||||||||||    
T  54854173 tagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagctatg 54854269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 12585553 - 12585660
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgtct 269  Q
    |||||||||||||| ||||| | |||||||||||||| || | ||| |||      || | |||||||||||||||||| |||||||||||| ||||| |    
T  12585553 tagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgccaactgagttatgttt 12585652  T
Q  270 acggggac 277  Q
    ||||||||    
T  12585653 acggggac 12585660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 20166361 - 20166323
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20166361 ccctgcatataacaatgcatgtccctgccaactgagcta 20166323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 12820455 - 12820496
Alignment:
Q  226 ccctgcatataacaatgcat-gtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12820455 ccctgcatataacaatgcattgtctctgccaactgagctatg 12820496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 34371046 - 34370917
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    |||| |||||||| |||| || || |||||  |||| ||||||  |||||||| ||||  ||| |||||||||   | ||||||||| ||||||||||||    
T  34371046 ttttatcagatagcctattggctaaaattcttctttttcaaggagaataagtggggtgatcgaaattcaaacctcgacccctgcatacaacaatgcatgt 34370947  T
Q  248 ctctgccaactgagctatgtctacggggac 277  Q
    ||||| |||| || |||||| || ||||||    
T  34370946 ctctgtcaaccgaactatgtttatggggac 34370917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 1589207 - 1589247
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  1589207 ccctgcatataacaatgcatgtcaccgccaactgagctatg 1589247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 4419736 - 4419776
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  4419736 ccctgcatataacaatgcatgtctctgacaactgagttatg 4419776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 38657585 - 38657549
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagc 262  Q
    ||||||||||||||||||||||| |||||||||||||    
T  38657585 ccctgcatataacaatgcatgtccctgccaactgagc 38657549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 48512283 - 48512203
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||| |||||||| |||||||| | | | |||| ||  ||||||||||||||||||| |||| |||||||||||||||||    
T  48512283 aaggtgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcattgtccctgccaactgagctatg 48512203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 6202704 - 6202613
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    |||||||||||||| ||||| | |||||||  |||||||| | ||| |||| ||  |||| |||| ||||| ||||||| ||||||||||||    
T  6202704 tagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccctagcccctacataaaacaaagcatgtcgctgccaactgag 6202613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 36045930 - 36045835
Alignment:
Q  171 agaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||| ||||  | | |||||||||||||||   ||| || |  || ||||||||||||||||||||||| ||| ||| |||||||||    
T  36045930 agaattcacctttttcaatatgactaagtgaggtgtccggagttcgaatctcaacccctgcatataacaatgcatgtccctgtcaattgagctatg 36045835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 37997840 - 37997931
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    ||||||||| | || | ||||| |||||||| |||||| | | ||| ||||  | |||||||||||||||||| ||||| ||||||||||||    
T  37997840 tagaattcatcctttttaaggtgaataagtggggtgtctggggttcgaaccccagaccctgcatataacaatgaatgtccctgccaactgag 37997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 42432053 - 42432018
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgag 261  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42432053 ccctgcatataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 9084837 - 9084763
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    |||||||| |||||||||| ||| || |   | ||||||||||||||||||| |||| |||||||||||||||||    
T  9084837 aataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcattgtccctgccaactgagctatg 9084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 24039985 - 24039893
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||||||||| || | ||| ||||   | ||   |||||||||||||||||| ||| |||||||||||||    
T  24039985 tagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccgaccc---catataacaatgcatgtc-ctgtcaactgagctatg 24039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 31480316 - 31480274
Alignment:
Q  226 ccctgcatataacaatgca-tgtctctgccaactgagctatgt 267  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  31480316 ccctgcatataacaatgcattgtccctgccaactgagctatgt 31480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 43049981 - 43050023
Alignment:
Q  224 aaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  43049981 aaccctgcatataacaatgcatgttcctgtcaactgagctatg 43050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 49319492 - 49319398
Alignment:
Q  173 aattcacctttct-caaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| | |||||| |||||||| |||||||| | ||  ||||   | |||||||||||| ||||||||||  ||||||||||||||||    
T  49319492 aattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactgagctatg 49319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 56913 - 56950
Alignment:
Q  229 tgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  56913 tgcatataacaatgcatgtccctgccaactgagttatg 56950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 36008320 - 36008279
Alignment:
Q  226 ccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  36008320 ccctgcatataacaatgcattgtccctgccaactgagctatg 36008279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 27921941 - 27921901
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| |||||||||| || ||||||||||||||    
T  27921941 ccctgcatataataatgcatgtccctaccaactgagctatg 27921901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 9768803 - 9768899
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| |||||||||||||||||    
T  9768803 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatg 9768899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 9769571 - 9769670
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| | ||| ||||  || |||| ||||||| |||||||||| |||||||||||||||||    
T  9769571 ggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgagctatg 9769670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 43020712 - 43020616
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||| ||||||| ||| |||| |||||||||| ||| ||||  || |||||||||||| |||||||||| |||||||| ||||||||    
T  43020712 tagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagctatg 43020616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 50576030 - 50575907
Alignment:
Q  142 tatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaat 241  Q
    ||||| ||||||||  ||| ||| ||| || ||||||||||| | ||||| ||||||||||||||| ||| ||| ||||  |  || |||||||||||||    
T  50576030 tattttttttgtcaagtagcctaacggctataattcaccttttttaaggtgaataagtgaggtgtctgaggttcgaaccccagcccttgcatataacaat 50575931  T
Q  242 gcatgtctctgccaactgagctat 265  Q
    ||||||| || |||||||||||||    
T  50575930 gcatgtcccttccaactgagctat 50575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 13941423 - 13941325
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    ||||||||||||| ||| ||||| | |||||||| |||||||||  ||| ||||   |||||||||||||||||||||||||  |||||||||| ||||    
T  13941423 ggttagaattcacttttttcaagatgaataagtggggtgtccgaagttcgaacctcgaaccctgcatataacaatgcatgtccttgccaactgaactat 13941325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 5684199 - 5684127
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| |||||| ||| ||||| || ||| |||||||||||| ||||||||||||||||||||||||||||    
T  5684199 aataagtggggtgtctgaggttcaatcc-taacccctgcatataataatgcatgtctctgccaactgagctatg 5684127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 3341730 - 3341826
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| | ||     |||||||||||| |||||||||| |||||||||||||||||    
T  3341730 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaactgagctatg 3341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 11238022 - 11238118
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||| | |||||||| |||||||| ||||| ||||   | |||||||||||| ||||||||||  ||||| ||||||||||    
T  11238022 tagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatg 11238118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 41677187 - 41677067
Alignment:
Q  144 tttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgc 243  Q
    |||||||| |||| ||| |||  || |||||||||||||| ||||||| |||||||| ||||||||   ||| ||||   | ||| |||||||| ||||     
T  41677187 tttcttttttcaggtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatga 41677088  T
Q  244 atgtctctgccaactgagcta 264  Q
    |||||||||||||||||||||    
T  41677087 atgtctctgccaactgagcta 41677067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 1721263 - 1721145
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||  ||| ||| ||| |||||||||||||| | ||||| ||||||||||||||||| | ||| || |     ||||||||||||||||||||||    
T  1721263 ttttgtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgt 1721164  T
Q  248 ctctgccaactgagctatg 266  Q
      || ||||||||||||||    
T  1721163 tcctaccaactgagctatg 1721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 2643787 - 2643905
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||| ||| |||  ||||||| ||||| ||| | ||||| |||||||| |||||| | | ||||||||   | || ||||||||| |||||||||    
T  2643787 ttttgtcaggtagtctagtggttagagttcacattttttaaggtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcatgt 2643886  T
Q  248 ctctgccaactgagctatg 266  Q
    ||||||||||| |||||||    
T  2643887 ctctgccaactaagctatg 2643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 47645848 - 47645886
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47645848 ctgcatataacaatgcatgtctctgccaactgagctatg 47645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 195148 - 195051
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    ||||||||||||||||| ||||||| |||||||| |||||| | | | | ||||  |  ||||||||||||  ||||||||| |||||||||||||||    
T  195148 ggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtccctgccaactgagcta 195051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 42801922 - 42801873
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  42801922 ctgcatataacaatgcatgtctctgtcaactgagctatgttcacggggac 42801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 48565141 - 48565238
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||||| |||| ||||||||||| |||||||||| ||| || | ||  || ||||||||||||||  | || |||||||||||| |||||    
T  48565141 tagaattcacctttttcaaagtaaataagtggggtgtccgaggttcgaaacttagtccttgcatataacaatgtttatccctgccaactgagatatgt 48565238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 18003861 - 18003821
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18003861 ccctgcatataacaatgcatgtccctgccaactgagctatg 18003821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 4511516 - 4511627
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| | ||||| |||||||| |  ||||| |||||||||    | |||||||||||| ||||||||||  |||||| |||| ||||    
T  4511516 ggttagaattcaccttttttaaggtgaataagtgggacgtccgggattcaaacaccgacccctgcatataataatgcatgtccttgccaattgagttatg 4511615  T
Q  267 tctacggggacg 278  Q
    |  |||||||||    
T  4511616 ttcacggggacg 4511627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 16182913 - 16182814
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||  ||| ||||| | |||||||| |||||||| | ||  ||||  |  |||| ||||||| ||||||||||||||||||||||||||||    
T  16182913 ggttagaattcatatttttcaagatgaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgccaactgagctatg 16182814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 18646790 - 18646693
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| |||| | ||||||||| ||||| ||   ||||||||| || |||||||||| ||||||||||||  ||||||||||| ||||    
T  18646790 ggttagaattcacctttttcaaagaaaataagtg-ggtgttcggagttcaaaccgcaa-ccctgcatatcacaatgcatgtccatgccaactgagttatg 18646693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 9410320 - 9410417
Alignment:
Q  168 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||||||||||| ||||| | |||||||| |||||| ||| ||| || | | ||||||||||||||| |||||||||  |||||||||| |||||    
T  9410320 gttaaaattcacctttttcaagatgaataagtggggtgtctgaggttcgaatc-tcaaccctgcatataactatgcatgtccttgccaactgaactatg 9410417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 42908816 - 42908778
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42908816 ccctgcatataacaatgcatgtccctgccaactgagcta 42908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 4605836 - 4605932
Alignment:
Q  169 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||| | ||||| ||||| ||||||||| ||| ||  |||  |   ||||||||||||||||||||||||||| |||||||| ||||    
T  4605836 ttagaattcaccttttttaaggtgaataaatgaggtgtctgaggtttgaact-tggcccctgcatataacaatgcatgtctctgtcaactgagttatg 4605932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 12489969 - 12490010
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  12489969 ccctgcatataaaaatgcatgtctttgccaactgagctatgt 12490010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 18976048 - 18976007
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  18976048 ccctgcatataacaatgcatgtctctgacaattgagctatgt 18976007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 4146379 - 4146339
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  4146379 ccctgcatataacaatgcatgtttctgtcaactgagctatg 4146339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 5862168 - 5862132
Alignment:
Q  231 catataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||||||||| ||||||||||||||||||    
T  5862168 catataacaatgcatgtccctgccaactgagctatgt 5862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 8890082 - 8890126
Alignment:
Q  171 agaattcacctttctcaaggtaaataagtgaggtgtccgagattc 215  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||    
T  8890082 agaattcacatttctcaaggtaaataagtgaggtatccgggattc 8890126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 18179373 - 18179333
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  18179373 ccctgcatataacaatgcatgtccctgccaactgagttatg 18179333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 52961132 - 52961172
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  52961132 ccctgcatataacaatgcatgtccttgccaactgagctatg 52961172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 2903021 - 2903112
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    |||||||| ||||| ||||||| |||||||| ||||| || | ||| ||||   | | ||||||||||||||||||||| ||| ||||||||    
T  2903021 tagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccctggcaactgag 2903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 47939246 - 47939289
Alignment:
Q  224 aaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  47939246 aaccctgcatataacaatgcattgtccctgccaactgagctatg 47939289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 9527504 - 9527430
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    |||||||| |||||||  | ||||||||   | ||||||||||||||||||| |||| |||||||||||||||||    
T  9527504 aataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatg 9527430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 13870098 - 13870172
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat-gtctctgccaactgagctatg 266  Q
    |||||||| |||||||| ||||||||||     |||||||||||| ||||||| ||| |||||||||||||||||    
T  13870098 aataagtggggtgtccgggattcaaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 13870172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 28417330 - 28417368
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  28417330 ctgcatataagaatgcatgtctctgccaactgagttatg 28417368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 51917554 - 51917592
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  51917554 ctgcatataataatgcatgtctatgccaactgagctatg 51917592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 9074043 - 9074002
Alignment:
Q  224 aaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||    
T  9074043 aaccctgcatataacaatgtatgtccctgtcaactgagctat 9074002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 37262154 - 37262195
Alignment:
Q  225 accctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||| ||||||| ||||||||||| |||||    
T  37262154 accctgcatataacaacgcatgtccctgccaactgaactatg 37262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 1576114 - 1576154
Alignment:
Q  169 ttagaattcacctttctcaaggtaaataagtgaggtgtccg 209  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  1576114 ttagaattcacttttttcaaggtaaataagtggggtgtccg 1576154  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 7015737 - 7015777
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  7015737 ccctacatataacaatgcatgtcccagccaactgagctatg 7015777  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 7906376 - 7906416
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| || |||||||| |||||    
T  7906376 ccctgcatataacaatgcatgtccctaccaactgaactatg 7906416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 9004391 - 9004351
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  9004391 ccctgcatataacaatatatgtccctgccaactgagctatg 9004351  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 18923896 - 18923975
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||| |||| ||| |||||||||| ||| |||| | |||||||||||||| |||||| |||| || ||||||||||||||    
T  18923896 aaggtgaatacgtggggtgtccgaggttcgaaccctgaaccctgcatataataatgcattgtc-ctaccaactgagctatg 18923975  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 23758303 - 23758343
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| |||||| || ||||||||||||||||||    
T  23758303 ccctgcatataataatgcacgtttctgccaactgagctatg 23758343  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 28284008 - 28284040
Alignment:
Q  234 ataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||||||||||||||||||||||||||||    
T  28284008 ataataatgcatgtctctgccaactgagctatg 28284040  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 33176153 - 33176193
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  33176153 ccctgcatataacaatgcatatccctaccaactgagctatg 33176193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 41182874 - 41182803
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatg 242  Q
    |||||||||||||| |||| || |||||||| |||||||| | ||||||||   | |||||||||||||||||    
T  41182874 tagaattcaccttt-tcaaagtgaataagtggggtgtccggggttcaaaccccgacccctgcatataacaatg 41182803  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 47141856 - 47141896
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  47141856 ccctgcatataacaatgcatgtccctgtcaactgagttatg 47141896  T

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Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 40160836 - 40160740
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| | ||||| |||||||| |||||||| | ||||||||  |  ||| ||||||||||||||||||| ||||||| |||||||||    
T  40160836 tagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctgccaattgagctatg 40160740  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 4045624 - 4045723
Alignment:
Q  166 cggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||||||||||| ||||| | |||||||| |||||||||  ||| ||||   | ||||||||||||||||||||||| ||| ||||||| ||||    
T  4045624 cggttagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaactgaactat 4045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 28951970 - 28951871
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||| ||| ||||||| |||||||| ||||| || | ||| |||| | | |||||||||||| ||||||||| ||||||||||||| ||||    
T  28951970 ggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatg 28951871  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 16874240 - 16874280
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  16874240 ccctgcatataacaatgcatgtccctgccaactgagctatg 16874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 24130656 - 24130564
Alignment:
Q  174 attcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| |||| ||||||| |||||||| |||||||| | ||||||||     ||||||||||||||||| ||||| |||||||||||| ||||    
T  24130656 attcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtccctgccaactgagttatg 24130564  T

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Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 3993698 - 3993797
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| || |||| ||  |||| || |||||||| | |||||||||    ||||||||||||||||||||||| ||  |||||||||||||    
T  3993698 ggttagaattcaccattttcaaagtgcataaatggggtgtccggggttcaaaccgcggcccctgcatataacaatgcatgtccctctcaactgagctatg 3993797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 4010009 - 4010108
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| | || ||||||| ||||| || ||||| || | ||||||| |    ||||||||||||||||||||||| || ||||||||||||||    
T  4010009 ggttagaattcaacattttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 4010108  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 3973397 - 3973307
Alignment:
Q  176 tcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| || ||||||| ||||| || |||||||| | |||||| ||    ||||||||||||||||||||||| || ||||||||||||||    
T  3973397 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 3973307  T

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Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 3996479 - 3996569
Alignment:
Q  176 tcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| || ||||||| ||||| || |||||||| | |||||| ||    ||||||||||||||||||||||| || ||||||||||||||    
T  3996479 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatg 3996569  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 6054197 - 6054255
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgt 206  Q
    |||||||| |||| |||  ||||||||||||||||| ||||||| ||||||||||||||    
T  6054197 ttttgtcaaatagtctagtggttagaattcacctttttcaaggtgaataagtgaggtgt 6054255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 12143460 - 12143498
Alignment:
Q  229 tgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12143460 tgcatataacaatgcatgtccctgccaactgagctatgt 12143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 51017834 - 51017796
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  51017834 cctgcatataacaatgcatgtccctgccaactgagctat 51017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 19137664 - 19137624
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  19137664 ccctgcatataacaatgcatgttcctgccaactgagctatg 19137624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 24160578 - 24160618
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  24160578 ccctgcatataacagtgcatgtctctgccaactgagttatg 24160618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 30745785 - 30745821
Alignment:
Q  230 gcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatg 30745821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 17262321 - 17262270
Alignment:
Q  169 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaacc 220  Q
    ||||||||||||||| ||||||| |||||||| |||||||| ||||| ||||    
T  17262321 ttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaacc 17262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 19149522 - 19149435
Alignment:
Q  173 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 260  Q
    |||||| |||| |||| |||||||| ||  ||||| | | |||||||| | |||||| ||||||| |||||||||||||| |||||||    
T  19149522 aattcatctttttcaaagtaaataaatggagtgtctggggttcaaaccctgaaccctacatataataatgcatgtctctgtcaactga 19149435  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 23026001 - 23025902
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| | || || |||||||| |||||| | | ||||||||  || | || ||| ||| ||||||||| |||||||||| |||||||    
T  23026001 ggttagaattcaccttttttaaagtgaataagtggggtgtctggggttcaaacctcaatcgctacatttaataatgcatgtttctgccaacttagctatg 23025902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 33533243 - 33533208
Alignment:
Q  231 catataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33533243 catataacaatgcatgtctctgccaactgagttatg 33533208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 34407084 - 34407175
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    ||||||||| | || ||||| | |||||||| |||||| | | ||| ||||  || |||||||||||| |||||||||| ||||||||||||    
T  34407084 tagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaactgag 34407175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 51412041 - 51412080
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  51412041 cctgcatataacaatgcatgtccctgccaactgaactatg 51412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 12236644 - 12236606
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  12236644 ccctgcatataataatgcatgtccctgccaactgagcta 12236606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 16985121 - 16985031
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 260  Q
    |||||||||| ||| | || || ||||||||  |||| |||| ||||||||  || |||| ||||||| |||| |||||||||||||||||    
T  16985121 tagaattcactttttttaaagtgaataagtggagtgttcgaggttcaaacccaaacccctacatataataatgaatgtctctgccaactga 16985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 31680854 - 31680737
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    |||||||| |||| |||  || || ||||||||||| | ||||| |||||||| |||||||||  ||||||||  || | || | |||||||||||||||    
T  31680854 ttttgtcaaatagtctagtggctaaaattcaccttttt-aaggtgaataagtggggtgtccgaagttcaaaccccaacctctacgtataacaatgcatgt 31680756  T
Q  248 ctctgccaactgagctatg 266  Q
    | || | ||||||||||||    
T  31680755 ccctacaaactgagctatg 31680737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 6951802 - 6951880
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaa-ccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| |||||||| |||||||||| |||||| |||  | |||||||||||| |||||||||| ||| |||||||| ||||    
T  6951802 aaggtgaataagtgcggtgtccgaggttcaaatccg--acccctgcatataataatgcatgtccctgtcaactgagttatg 6951880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Complemental strand, 46969037 - 46969008
Alignment:
Q  232 atataacaatgcatgtctctgccaactgag 261  Q
    ||||||||||||||||||||||||||||||    
T  46969037 atataacaatgcatgtctctgccaactgag 46969008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 23237407 - 23237367
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  23237407 ccctacatataataatgcatgtccctgccaactgagctatg 23237367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 27119377 - 27119293
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgcc 254  Q
    |||||||| ||||| | |||| ||||||||| ||||| || ||||| ||||   | | ||||||||||||||||||||| |||||    
T  27119377 tagaattctcctttttaaaggaaaataagtggggtgttcgggattcgaaccccgacctctgcatataacaatgcatgtccctgcc 27119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 40996950 - 40996882
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgcca 255  Q
    ||||| |||||||| |||| ||||||||| |||  |   |||||||||||||||||||| |||||||||    
T  40996950 aaggtgaataagtggggtgcccgagattcgaactatgccccctgcatataacaatgcatatctctgcca 40996882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 41767779 - 41767859
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||| |||||||| |||| ||||||||| |||  | | ||||||||||||||||||| |||  ||||||||||| |||||    
T  41767779 aaggtgaataagtggggtgcccgagattcgaacaatgacccctgcatataacaatgcattgttcctgccaactgaactatg 41767859  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 43774230 - 43774190
Alignment:
Q  226 ccctgcatataacaatgca-tgtctctgccaactgagctat 265  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  43774230 ccctgcatataacaatgcattgtccctgccaactgagctat 43774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 43911659 - 43911619
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  43911659 ccctgcatataacaatatatgtctctgccaactaagctatg 43911619  T

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Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 18065358 - 18065259
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| ||||||| ||| ||||||| ||||||| |||||| || | ||| ||||  || ||||||||||||||||||||| |||| ||||||||||||||    
T  18065358 ggttaaaattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatg 18065259  T

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Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 36386105 - 36386203
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| |||| | || || |||||||| |||||||||||||||||||   | |||||||||||||||||||| || || ||||||||||||||    
T  36386105 ggttagaattcatcttttttaaagtgaataagtggggtgtccgagattcaaacc-cgacccctgcatataacaatgcatatccctaccaactgagctatg 36386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 2057581 - 2057486
Alignment:
Q  169 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||| | ||||| |||||||| |||||||| ||||| |||  |  |||||||||||||||||| || || |||||||||||||||||    
T  2057581 ttagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaac--tcgaccctgcatataacaatgtatatccctgccaactgagctatg 2057486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 1244670 - 1244574
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||||| | ||| ||||   | ||||||||||| ||||| ||||| ||||||||||| |||||    
T  1244670 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaactatg 1244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 29896152 - 29896252
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| |||| ||||||| |||||||| |||||||  ||||| |||| | |  | |||||||||||||||||||| ||| |||||||| ||||    
T  29896152 ggttagaattcatctttttcaaggtgaataagtggggtgtccatgattcgaaccctgactcatgcatataacaatgcatgtcactgtcaactgagatatg 29896251  T
Q  267 t 267  Q
    |    
T  29896252 t 29896252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 16310101 - 16310016
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaa 256  Q
    |||||||||||||| ||||||||||||||||  ||||| ||| |||||| |  ||| |||||| |||||||||||||||||| ||||    
T  16310101 tagaattcacctttttcaaggtaaataagtggagtgtcagaggttcaaatc-caaatcctgcaaataacaatgcatgtctctaccaa 16310016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 44132615 - 44132652
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44132615 ctgcatataacaatgcatgtctctgccaactgagctat 44132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 18089830 - 18089734
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||| ||||||| ||||||||||||||| | | ||| |||  |   |||||||||  | ||||||||||||||||||||||||||||    
T  18089830 tagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgccaactgagctatg 18089734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 22355184 - 22355088
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||  |||||| |||||||| |||||| |   ||| || |  || ||||||| |||||||||||||||  ||||||||||||||||    
T  22355184 tagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtccttgccaactgagctatg 22355088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 34107375 - 34107279
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||| ||||||| |||||||| |||||| |   ||| ||||  || ||||||||||||  || |||||| |||||||||||||||||    
T  34107375 tagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccctgccaactgagctatg 34107279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 36277752 - 36277792
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  36277752 ccctacatataacaatgcatgtcactgccaactgagctatg 36277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 257
Target Start/End: Complemental strand, 10602050 - 10602019
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaac 257  Q
    ||||||||||||||||||||||||||||||||    
T  10602050 ccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 19352909 - 19352870
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  19352909 ctgcatataacaatgcatgtctctgtcaactgagttatgt 19352870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 32288462 - 32288383
Alignment:
Q  185 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    ||||||| |||||||| |||||||||| ||| ||||   | |||| ||||||| ||||||||| |||| |||||||||||    
T  32288462 tcaaggtgaataagtggggtgtccgaggttcgaaccccgatccctacatataataatgcatgtttctgtcaactgagcta 32288383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 32944106 - 32944059
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggg 274  Q
    ||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  32944106 cctgcatataataatgcatgtccatgccaactgagctatgtttacggg 32944059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 34376600 - 34376553
Alignment:
Q  213 ttcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 260  Q
    |||||||| |||  |||||||||||||||||||||| |||||||||||    
T  34376600 ttcaaaccctaactcctgcatataacaatgcatgtccctgccaactga 34376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 6496486 - 6496444
Alignment:
Q  224 aaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||| |||||||||||||||||| || ||||||||||||||    
T  6496486 aaccctacatataacaatgcatgtcccttccaactgagctatg 6496444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 29713083 - 29713173
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactga 260  Q
    ||||||||| |||| | |||||||||||||  |||||| | | ||| ||||  || ||||||||||||||||| |||||  ||||||||||    
T  29713083 tagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactga 29713173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 13294434 - 13294475
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||    
T  13294434 ccctgcatataacaatgcatgtccctgccaattgaactatgt 13294475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 28679920 - 28679879
Alignment:
Q  168 gttagaattcacctttctcaaggtaaataagtgaggtgtccg 209  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  28679920 gttagaatttaccttttgcaaggtaaataagtgaggtgtccg 28679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 32527127 - 32527176
Alignment:
Q  226 ccctgcatataacaatgcat-gtctctgccaactgagctatgtctacggg 274  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||||||    
T  32527127 ccctgcatataataatgcattgtccctgccaactgagctatgtttacggg 32527176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 2394945 - 2394997
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtg 200  Q
    |||||||| | || |||| ||||||||||||||||| ||||||| ||||||||    
T  2394945 ttttgtcaaaaagtctattggttagaattcacctttttcaaggtgaataagtg 2394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 5772905 - 5772865
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  5772905 ccctgcatataacaatacatgtccttgccaactgagctatg 5772865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 11133160 - 11133080
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||| |||| || ||||||||||||||    
T  11133160 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagctatg 11133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 14307744 - 14307780
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagc 262  Q
    ||||||||||||||||||||||| || ||||||||||    
T  14307744 ccctgcatataacaatgcatgtccctaccaactgagc 14307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 39118523 - 39118403
Alignment:
Q  141 ctatttcttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaa 240  Q
    |||||| ||||||||| ||| |||  || |||||||| ||||| | ||||  |||||||| ||||| || ||||| |||  |   |||||||||||||||    
T  39118523 ctattttttttgtcaggtagtctagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaactctggcccctgcatataacaa 39118424  T
Q  241 tgcatgtctctgccaactgag 261  Q
    || ||||| || |||||||||    
T  39118423 tgtatgtccctaccaactgag 39118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 19388 - 19477
Alignment:
Q  169 ttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaact 258  Q
    ||||||||||||||| |||| || ||||| ||||||||||||| ||||| ||  || |||| ||||||||||||||||||  ||||||||    
T  19388 ttagaattcacctttttcaaagtgaataaatgaggtgtccgaggttcaatccccaacccctacatataacaatgcatgtccgtgccaact 19477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 38040363 - 38040271
Alignment:
Q  173 aattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| ||||| | |||||||| | |||||||| ||| ||||   | ||||||||||||||||||||||| |||||||||||||||||    
T  38040363 aattcacctttttcaagatgaataagtgggatgtccgag-ttcgaacctcgacccctgcatataacaatgcatgtccctgccaactgagctatg 38040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 7147013 - 7147109
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| |||| |||||||| ||||||||| ||| ||| ||||   | |||||||||||| ||||||||||  | ||||||||||||||    
T  7147013 tagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctatg 7147109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 42781642 - 42781683
Alignment:
Q  224 aaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  42781642 aaccctgcatataacaatgcatgtccctgccaactgagctat 42781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 11246544 - 11246584
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  11246544 ccctgcatataacaatgcatgtccctgccaactgagctatg 11246584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 25660957 - 25660901
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatat 282  Q
    |||||||||||||||||||| || |||||||||||||||||   |||||||||||||    
T  25660957 ccctgcatataacaatgcatatccctgccaactgagctatgctcacggggacgatat 25660901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 31556919 - 31556823
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| || ||||||| |||||||| |||||||| | ||| |||    | ||||||||||||||||||||||| |||| || |||||||||    
T  31556919 tagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagctatg 31556823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 36742017 - 36742057
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  36742017 ccctgcatataacaattcatgtctctgccaactgagctatg 36742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 42553133 - 42553230
Alignment:
Q  168 gttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| ||| ||||||| ||||||||  ||||||| | ||| ||||   | |||||||||||||||||||||||  || |||||||||||||    
T  42553133 gttagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccga-ccctgcatataacaatgcatgtcgttgtcaactgagctatg 42553230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 6806690 - 6806731
Alignment:
Q  226 ccctgcatataacaatgcat-gtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  6806690 ccctgcatataacaatgcattgtctctgccaactgagctatg 6806731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 28768701 - 28768600
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||| |||||||  ||||||||| |||  | ||||| |||  | | || ||||||| |||||||||||| || |||||||| |||||    
T  28768701 ggttagaattcacctttttcaaggtggataagtgagatgtttgggattcgaactctgacccttgcatatgacaatgcatgtccctaccaactgaactatg 28768602  T
Q  267 tc 268  Q
    ||    
T  28768601 tc 28768600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 31907737 - 31907657
Alignment:
Q  185 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    ||||||| |||||||| ||||| |||| ||  |||| | | ||||||||||||||||||||||| |||| |||||| ||||    
T  31907737 tcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtccctgcaaactgacctat 31907657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 35813292 - 35813332
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  35813292 ccctgcatataacaatgcatgtccctgtcaactgagctatg 35813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 9963500 - 9963421
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctat 265  Q
    ||||| |||||||| || ||||||  ||| ||||  || ||||||||||||||||||| |||| ||||||||||||||||    
T  9963500 aaggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatgcattgtccctgccaactgagctat 9963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 17557075 - 17557040
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgag 261  Q
    |||| |||||||||||||||||||||||||||||||    
T  17557075 ccctacatataacaatgcatgtctctgccaactgag 17557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 38040140 - 38040183
Alignment:
Q  224 aaccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||||||||||||||||  |||||||||| ||||||    
T  38040140 aaccctgcatataacaatgcatgtccttgccaactgaactatgt 38040183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 40250228 - 40250267
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  40250228 cctgcatataacaatgcatgttactgccaactgagctatg 40250267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 16969672 - 16969758
Alignment:
Q  180 ctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||||||| |||||||| |||||  ||||||||||||   | |||| |||| ||||||||||||| || |||||| |||||||    
T  16969672 ctttttcaaggtgaataagtggggtgtttgagattcaaaccccgatccctacataaaacaatgcatgtccctaccaactaagctatg 16969758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 34325310 - 34325257
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacga 279  Q
    |||||||||||| |||||||||| ||| ||||||||| ||||  ||||||||||    
T  34325310 ccctgcatataataatgcatgtccctgtcaactgagccatgttcacggggacga 34325257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 20186911 - 20186875
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagc 262  Q
    |||||||||||| |||||||||| |||||||||||||    
T  20186911 ccctgcatataataatgcatgtccctgccaactgagc 20186875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22687872 - 22687924
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaac 219  Q
    ||||||||||||||||| ||||||| |||||||| ||||| || | |||||||    
T  22687872 ggttagaattcacctttttcaaggtgaataagtggggtgttcggggttcaaac 22687924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 31280374 - 31280469
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| |||||||  ||||||| ||||| || | ||| |||| |   |||||||||||  ||| |||||| |||||||||||||||||    
T  31280374 tagaattcacctttttcaaggtggataagtg-ggtgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctgccaactgagctatg 31280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 38230222 - 38230273
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcat 245  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||||||||||    
T  38230222 aataagtgaggtgtccgggattcaaacc-cgacccctgcatataacaatgcat 38230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 39684342 - 39684262
Alignment:
Q  167 ggttagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgt 247  Q
    ||||||||||||||||| | ||||| |||||||| | |||||| | || ||| | | | |||| |||||||||||||||||    
T  39684342 ggttagaattcaccttttttaaggtgaataagtgggatgtccggggtttaaatcctgacccctacatataacaatgcatgt 39684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 10020463 - 10020559
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||| | |||||||| | ||| || | ||| ||||  || ||||||||||||||||||||||| ||| |||||||||||||    
T  10020463 tagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtccctgtcaactgagctatg 10020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 7465511 - 7465471
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7465511 ccctgcatataataatgcatgtctctgccaactgagctatg 7465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 23799378 - 23799310
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgag 261  Q
    |||||||| |||||||||| ||| || |   | ||||||||||||||||||||||||||||||||||||    
T  23799378 aataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgag 23799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 24427408 - 24427368
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  24427408 ccctgcatataacaatgcatgtctctgccaactgagttatg 24427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 35498498 - 35498403
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| |||| || |||||||| |||||||||  ||  ||||  || |||||||||||| |||||||||| |||||||||||| ||||    
T  35498498 tagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaaccc-aacccctgcatataataatgcatgtccctgccaactgagttatg 35498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 39524788 - 39524713
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatg 246  Q
    |||||||||||||| |||| |||||||| |||||||| || ||||| ||||  || |||||||||||||||||||||    
T  39524788 tagaattcacctttttcaaagtaaataaatgaggtgttcg-gattcgaacctcaacccctgcatataacaatgcatg 39524713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 8147201 - 8147276
Alignment:
Q  191 taaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||| |||  |||   | || |||||||||||||||||||| ||||||| |||||||||    
T  8147201 taaataagtgaggtgtccgaggttcgtacccggacccttgcatataacaatgcatgtccctgccaattgagctatg 8147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 35195888 - 35195837
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    |||||||||||| |||||||||| |||||||||||||||||  |||||||||    
T  35195888 ccctgcatataataatgcatgtccctgccaactgagctatgcttacggggac 35195837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 7392315 - 7392396
Alignment:
Q  185 tcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||| |||||||| ||||| || | ||||||||  || | ||||||||||||||||||||  ||||||| |||||||||    
T  7392315 tcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttcctgccaattgagctatg 7392396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 11808142 - 11808045
Alignment:
Q  168 gttagaattcacctttctc-aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagcta 264  Q
    |||||||||||| ||| || ||||| |||||||| |||||||| | ||| ||||   | ||||||||||||||||||||||| || |||| |||||||    
T  11808142 gttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgagcta 11808045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 17305443 - 17305480
Alignment:
Q  229 tgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17305443 tgcatataacaatgcatgtccctgccaactgagctatg 17305480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 37410498 - 37410571
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||||||   ||| |||| | | |||||||||||||||||||||||  | ||||||||||||||    
T  37410498 aataagtgaggtgtccggagttcgaaccttgacccctgcatataacaatgcatgtccttaccaactgagctatg 37410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 37995596 - 37995636
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37995596 ccctgcatataaca-tgcatgtctctgccaactgagctatgt 37995636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 1649253 - 1649157
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| || ||||||| |||||||| |||||||  | ||| |||| |   ||||||||| |||||||||| || || ||||||||||||||    
T  1649253 tagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagctatg 1649157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 43635689 - 43635593
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||| ||   ||||| |||||||| |||||||| | ||| ||||   | | |||||||||||||||||||| ||||||||||||| ||||    
T  43635689 tagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttatg 43635593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 10474523 - 10474602
Alignment:
Q  187 aaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||| ||||||||||||||||| |  || ||||   | ||||||||||||||||| |||||||| |||||||| |||||    
T  10474523 aaggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatg 10474602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 26734243 - 26734302
Alignment:
Q  148 ttttgtcagatagactatcggttagaattcacctttctcaaggtaaataagtgaggtgtc 207  Q
    ||||||||||||| |||  || |||||||||||||| ||||||| |||||||| ||||||    
T  26734243 ttttgtcagatagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtc 26734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 32309142 - 32309229
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaac 257  Q
    |||||||||| ||| | ||||| ||||| || |||||| ||||||| |||    | ||||||||||||||||||||||| ||||||||    
T  32309142 tagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccctgccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 38032905 - 38032956
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    ||||| ||||||||||||||||| |||||||||||| |||||  ||||||||    
T  38032905 ccctgtatataacaatgcatgtccctgccaactgagttatgttcacggggac 38032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 41139165 - 41139091
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||||||| ||||||| ||||| ||||   | |||||||||||| |||||| |||| |||||||||||||||||    
T  41139165 aataagtgaagtgtccgggattcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatg 41139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 19924810 - 19924773
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctat 265  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  19924810 ctgcatataataatgcatgtccctgccaactgagctat 19924773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 21285403 - 21285444
Alignment:
Q  226 ccctgcatataacaatgca-tgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  21285403 ccctgcatataacaatgcattgtccctgccaactgagctatg 21285444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 27726421 - 27726470
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggac 277  Q
    |||| ||||| |||||||||| ||||||||||||||||||  ||||||||    
T  27726421 ctgcttataataatgcatgtccctgccaactgagctatgttcacggggac 27726470  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 32814905 - 32814832
Alignment:
Q  193 aataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| |||||||| ||||| |||    | |||||||||||| |||||||||| || ||||||||||||||    
T  32814905 aataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccctaccaactgagctatg 32814832  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 43209446 - 43209405
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatgt 267  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  43209446 ccctgcatataacaatgcatgttcctgccaactgagttatgt 43209405  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 14772385 - 14772425
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  14772385 ccctacatgtaacaatgcatgtctctgccaactgagttatg 14772425  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 15222837 - 15222877
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  15222837 ccctacatgtaacaatgcatgtctctgccaactgagttatg 15222877  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 20527479 - 20527519
Alignment:
Q  226 ccctgcatataacaatgca-tgtctctgccaactgagctat 265  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  20527479 ccctgcatataacaatgcattgtccctgccaactgagctat 20527519  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 43712307 - 43712403
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||| ||||| ||||||   ||||||| ||| |||||| ||| ||||   | ||||| ||||||||||||||||| || ||||||||| ||||    
T  43712307 tagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgagttatg 43712403  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 45267977 - 45268033
Alignment:
Q  227 cctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatatg 283  Q
    ||||||||||| |||  |||||||||||||||||||||||   |||||||| |||||    
T  45267977 cctgcatataataatatatgtctctgccaactgagctatgctcacggggacaatatg 45268033  T

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Target: scaffold0712 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 4565 - 4525
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4565 ccctgcatataacaatgcatgtccctgccaactgagctatg 4525  T

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Target: scaffold0709 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 4585 - 4545
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4585 ccctgcatataacaatgcatgtccctgccaactgagctatg 4545  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 34083 - 34123
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34083 ccctgcatataacaatgcatgtccctgccaactgagctatg 34123  T

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Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 21016 - 21070
Alignment:
Q  228 ctgcatataacaatgcatgtctctgccaactgagctatgtctacggggacgatat 282  Q
    |||||||||||||||||||||| || ||||||||||||||  |||| ||||||||    
T  21016 ctgcatataacaatgcatgtctttgtcaactgagctatgttcacggagacgatat 21070  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 25011 - 25051
Alignment:
Q  226 ccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  25011 ccctgcatataacattgcatgtctctgccaactgagatatg 25051  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 1140 - 1044
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||||||| ||||||| |||||||| |||||| | | ||| ||||  |  |||| |||||||  ||||||||| || ||||||||||||||    
T  1140 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatg 1044  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 67262 - 67166
Alignment:
Q  170 tagaattcacctttctcaaggtaaataagtgaggtgtccgagattcaaaccgtaaaccctgcatataacaatgcatgtctctgccaactgagctatg 266  Q
    |||||||||| ||| ||||||| | |||||| |||||||  | ||| ||||  |  |||| ||||||||||||||| || || ||||||||||||||    
T  67262 tagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacatataacaatgcatatccctcccaactgagctatg 67166  T

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