View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13220_high_6 (Length: 347)
Name: NF13220_high_6
Description: NF13220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13220_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 4761331 - 4761652
Alignment:
| Q |
1 |
tgactaagtggaaccagaaccatttttcttattatatcttaccatgcatagatttgttaacaatttttgttaatgtttgttacaatatgttaatctcacc |
100 |
Q |
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| T |
4761331 |
tgactaagtggaaccagaatcatttttcttattatatcttaccatgcatagatttgttaacaatttttgttaatgtttgttacaatatgttaatctcacc |
4761430 |
T |
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| Q |
101 |
atttacgtaacagaaaatatcaataggcggggtttgttggtaaaccataataattaataattacattataattaaggttgcgtttatacccaattgttct |
200 |
Q |
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| T |
4761431 |
atttacgtaacagaaaatatcaataggcagggtttattggtaaaccataataattaataattacattataattaaggttgcgtttatacccaattgttca |
4761530 |
T |
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| Q |
201 |
atgaaaaggacatattcatacacgcaattgaaatcgttaccacaagacaagacaacatcattcataacacaatggttcttttcagtcctattaaaattaa |
300 |
Q |
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| T |
4761531 |
atgaaaaggac--attcatacacgcaattgaaatcgttaccacaagacaagacaacatcattcataacacaatggttcttttcagtcctattaaaattaa |
4761628 |
T |
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| Q |
301 |
attgaggtacaagaaacatttgat |
324 |
Q |
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|||||||||||||||||||||||| |
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| T |
4761629 |
attgaggtacaagaaacatttgat |
4761652 |
T |
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