View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13221_high_15 (Length: 252)

Name: NF13221_high_15
Description: NF13221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13221_high_15
NF13221_high_15
[»] chr8 (57 HSPs)
chr8 (91-244)||(12605160-12605313)
chr8 (1-92)||(14800028-14800119)
chr8 (6-90)||(4156240-4156324)
chr8 (6-98)||(17110942-17111034)
chr8 (6-92)||(3853616-3853702)
chr8 (6-92)||(3858074-3858160)
chr8 (8-96)||(33377296-33377384)
chr8 (9-92)||(33902667-33902748)
chr8 (8-92)||(44889354-44889438)
chr8 (7-94)||(11744717-11744804)
chr8 (17-95)||(17110866-17110944)
chr8 (17-94)||(42711364-42711441)
chr8 (19-98)||(40046798-40046877)
chr8 (8-94)||(23011732-23011818)
chr8 (8-90)||(29482806-29482888)
chr8 (6-82)||(13404900-13404976)
chr8 (8-92)||(24044960-24045044)
chr8 (8-92)||(29257350-29257434)
chr8 (8-96)||(36103097-36103185)
chr8 (8-88)||(44346677-44346757)
chr8 (9-95)||(33986001-33986087)
chr8 (8-77)||(8049269-8049338)
chr8 (17-90)||(13404829-13404902)
chr8 (8-89)||(35979003-35979084)
chr8 (8-92)||(28324661-28324745)
chr8 (9-96)||(14235-14321)
chr8 (35-94)||(14991690-14991749)
chr8 (17-56)||(32626027-32626066)
chr8 (17-92)||(37268091-37268166)
chr8 (20-86)||(8689138-8689204)
chr8 (17-98)||(33902750-33902831)
chr8 (17-90)||(3853700-3853773)
chr8 (17-90)||(3858158-3858231)
chr8 (8-92)||(515531-515615)
chr8 (16-92)||(31807409-31807484)
chr8 (44-95)||(32626069-32626120)
chr8 (58-96)||(14799975-14800013)
chr8 (8-54)||(26520438-26520484)
chr8 (8-54)||(30444932-30444978)
chr8 (8-54)||(34008819-34008865)
chr8 (6-52)||(38573468-38573514)
chr8 (9-54)||(30435321-30435365)
chr8 (18-54)||(7202885-7202921)
chr8 (58-98)||(29611382-29611422)
chr8 (10-54)||(42739969-42740013)
chr8 (8-55)||(13144620-13144667)
chr8 (8-55)||(15186816-15186863)
chr8 (47-94)||(27322687-27322734)
chr8 (8-94)||(1088276-1088362)
chr8 (8-54)||(29611408-29611454)
chr8 (58-92)||(34008799-34008833)
chr8 (18-55)||(8689207-8689244)
chr8 (58-95)||(30444964-30445001)
chr8 (26-54)||(7202921-7202949)
chr8 (32-88)||(30435250-30435306)
chr8 (58-94)||(36625256-36625292)
chr8 (58-94)||(42739947-42739983)
[»] chr5 (62 HSPs)
chr5 (1-95)||(9764335-9764429)
chr5 (1-94)||(15374028-15374121)
chr5 (8-92)||(22766952-22767036)
chr5 (1-91)||(20523201-20523291)
chr5 (6-96)||(40643891-40643980)
chr5 (1-94)||(2316376-2316470)
chr5 (8-98)||(37722880-37722970)
chr5 (6-91)||(3563278-3563363)
chr5 (15-92)||(26281262-26281339)
chr5 (17-97)||(40809336-40809416)
chr5 (19-90)||(2721557-2721628)
chr5 (8-95)||(25935276-25935363)
chr5 (8-95)||(40090400-40090487)
chr5 (17-98)||(15804316-15804397)
chr5 (1-90)||(32389974-32390063)
chr5 (8-96)||(41762201-41762289)
chr5 (8-95)||(927299-927386)
chr5 (21-92)||(9764426-9764497)
chr5 (17-92)||(15373960-15374035)
chr5 (13-92)||(23091963-23092041)
chr5 (19-98)||(34982210-34982288)
chr5 (8-94)||(32250084-32250169)
chr5 (17-95)||(32390056-32390134)
chr5 (6-96)||(32470878-32470968)
chr5 (6-92)||(40809414-40809500)
chr5 (14-95)||(16515099-16515180)
chr5 (1-89)||(6634082-6634170)
chr5 (8-92)||(22303856-22303940)
chr5 (16-96)||(33245366-33245446)
chr5 (17-92)||(20523133-20523208)
chr5 (8-90)||(19533893-19533975)
chr5 (17-94)||(23092046-23092123)
chr5 (35-95)||(6634012-6634072)
chr5 (8-88)||(9894308-9894388)
chr5 (8-90)||(37145487-37145569)
chr5 (37-90)||(28828369-28828422)
chr5 (17-90)||(28828431-28828504)
chr5 (17-92)||(2316463-2316537)
chr5 (8-54)||(22305132-22305178)
chr5 (15-88)||(16515009-16515081)
chr5 (58-98)||(2550322-2550362)
chr5 (37-98)||(13243451-13243514)
chr5 (6-54)||(15270838-15270886)
chr5 (38-90)||(15804399-15804451)
chr5 (6-54)||(17542345-17542393)
chr5 (17-92)||(32470966-32471039)
chr5 (43-90)||(13243514-13243561)
chr5 (8-54)||(33146211-33146257)
chr5 (58-95)||(22305109-22305146)
chr5 (8-53)||(28490031-28490076)
chr5 (18-54)||(2550348-2550384)
chr5 (12-92)||(35379344-35379423)
chr5 (47-98)||(5658770-5658821)
chr5 (8-95)||(10314646-10314733)
chr5 (19-54)||(34982293-34982328)
chr5 (58-92)||(33146061-33146095)
chr5 (58-92)||(33146191-33146225)
chr5 (8-73)||(11601058-11601123)
chr5 (8-53)||(17492634-17492679)
chr5 (58-94)||(15270872-15270908)
chr5 (58-98)||(22302533-22302573)
chr5 (62-94)||(28489479-28489511)
[»] chr1 (64 HSPs)
chr1 (1-92)||(4038143-4038234)
chr1 (1-94)||(15034657-15034750)
chr1 (6-97)||(34756422-34756513)
chr1 (17-94)||(23536065-23536142)
chr1 (9-89)||(45565397-45565477)
chr1 (17-92)||(15034743-15034818)
chr1 (9-95)||(38277412-38277498)
chr1 (1-94)||(27804333-27804426)
chr1 (1-90)||(28745799-28745887)
chr1 (8-92)||(24273209-24273293)
chr1 (6-94)||(50005077-50005165)
chr1 (8-98)||(8224762-8224852)
chr1 (8-94)||(26501068-26501154)
chr1 (21-94)||(4038073-4038146)
chr1 (17-97)||(27935569-27935649)
chr1 (13-97)||(29446745-29446828)
chr1 (8-92)||(47165201-47165285)
chr1 (17-92)||(30190220-30190295)
chr1 (1-55)||(5474467-5474521)
chr1 (6-54)||(15245480-15245528)
chr1 (17-88)||(27804269-27804340)
chr1 (6-92)||(6470673-6470759)
chr1 (6-92)||(44410311-44410397)
chr1 (1-54)||(23536135-23536188)
chr1 (8-97)||(28632575-28632663)
chr1 (17-90)||(34756511-34756584)
chr1 (17-90)||(40264114-40264187)
chr1 (6-54)||(32572960-32573008)
chr1 (18-98)||(43622977-43623057)
chr1 (1-54)||(17502248-17502301)
chr1 (6-99)||(31166303-31166396)
chr1 (8-85)||(37447891-37447968)
chr1 (17-90)||(50005163-50005236)
chr1 (35-91)||(32573024-32573080)
chr1 (6-54)||(40264068-40264116)
chr1 (35-95)||(44410413-44410473)
chr1 (8-95)||(39887124-39887211)
chr1 (8-83)||(44570687-44570762)
chr1 (8-95)||(49659214-49659300)
chr1 (17-87)||(28745880-28745950)
chr1 (28-93)||(32287942-32288007)
chr1 (6-54)||(27935523-27935571)
chr1 (6-54)||(37214892-37214939)
chr1 (22-90)||(38277504-38277571)
chr1 (10-89)||(37036940-37037019)
chr1 (8-83)||(37448390-37448465)
chr1 (58-96)||(15245456-15245494)
chr1 (8-90)||(34003379-34003461)
chr1 (58-96)||(34007442-34007480)
chr1 (8-54)||(41822532-41822578)
chr1 (58-95)||(5474414-5474451)
chr1 (8-80)||(31195468-31195540)
chr1 (18-54)||(45565479-45565515)
chr1 (58-97)||(41823181-41823220)
chr1 (8-51)||(50471791-50471834)
chr1 (58-92)||(32572940-32572974)
chr1 (58-92)||(34007358-34007392)
chr1 (8-54)||(44571239-44571285)
chr1 (38-76)||(52280972-52281010)
chr1 (62-95)||(17502195-17502228)
chr1 (9-54)||(32128068-32128113)
chr1 (58-95)||(50471765-50471802)
chr1 (8-89)||(51847855-51847935)
chr1 (58-94)||(40264046-40264082)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-95)||(402-496)
scaffold1562 (21-90)||(493-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-95)||(2097-2191)
scaffold1158 (21-90)||(2031-2100)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-88)||(56342-56429)
scaffold0044 (21-55)||(56311-56345)
[»] chr7 (52 HSPs)
chr7 (1-92)||(2057463-2057554)
chr7 (9-94)||(40110735-40110820)
chr7 (1-95)||(34388262-34388356)
chr7 (5-95)||(5644674-5644764)
chr7 (13-95)||(43955514-43955596)
chr7 (6-94)||(29065817-29065905)
chr7 (6-95)||(31632719-31632808)
chr7 (8-92)||(18789221-18789305)
chr7 (15-90)||(43955596-43955671)
chr7 (8-92)||(26162112-26162196)
chr7 (17-97)||(40110822-40110902)
chr7 (21-95)||(2057392-2057466)
chr7 (8-92)||(28539143-28539227)
chr7 (8-95)||(35776930-35777017)
chr7 (8-94)||(39342617-39342703)
chr7 (17-95)||(44915192-44915270)
chr7 (6-55)||(49052858-49052907)
chr7 (8-92)||(6498740-6498824)
chr7 (6-86)||(21635958-21636038)
chr7 (6-54)||(40854007-40854055)
chr7 (8-95)||(14603237-14603324)
chr7 (8-99)||(23455222-23455313)
chr7 (23-92)||(34398938-34399008)
chr7 (1-55)||(44915263-44915317)
chr7 (6-55)||(46069428-46069477)
chr7 (8-92)||(23548586-23548670)
chr7 (8-92)||(35455804-35455888)
chr7 (8-91)||(9784906-9784989)
chr7 (8-90)||(3905634-3905716)
chr7 (8-94)||(25189201-25189287)
chr7 (8-94)||(29639190-29639276)
chr7 (6-95)||(46481943-46482032)
chr7 (17-96)||(40854053-40854133)
chr7 (21-92)||(34388353-34388424)
chr7 (22-92)||(5644766-5644836)
chr7 (17-94)||(21635883-21635960)
chr7 (17-92)||(29065903-29065978)
chr7 (28-94)||(30524253-30524319)
chr7 (8-54)||(30587878-30587924)
chr7 (8-54)||(32650611-32650657)
chr7 (8-66)||(43791116-43791174)
chr7 (45-94)||(29195707-29195756)
chr7 (6-54)||(31913256-31913304)
chr7 (17-94)||(49052784-49052860)
chr7 (8-88)||(30629061-30629141)
chr7 (58-94)||(31913234-31913270)
chr7 (58-98)||(40853981-40854021)
chr7 (61-96)||(30080811-30080846)
chr7 (8-54)||(14790151-14790197)
chr7 (8-54)||(45984378-45984424)
chr7 (8-54)||(45988738-45988784)
chr7 (58-91)||(30587910-30587943)
[»] chr3 (61 HSPs)
chr3 (1-92)||(5415851-5415942)
chr3 (1-92)||(44692822-44692913)
chr3 (1-96)||(44436254-44436349)
chr3 (12-96)||(49457339-49457423)
chr3 (1-94)||(9129342-9129435)
chr3 (1-94)||(9137449-9137542)
chr3 (17-98)||(44692906-44692987)
chr3 (21-93)||(5415782-5415854)
chr3 (16-92)||(46672799-46672875)
chr3 (17-96)||(27251978-27252057)
chr3 (17-92)||(37321550-37321625)
chr3 (17-94)||(9129428-9129505)
chr3 (17-94)||(9137535-9137612)
chr3 (6-76)||(31070422-31070492)
chr3 (8-88)||(21307520-21307600)
chr3 (10-92)||(36397979-36398061)
chr3 (8-97)||(42005941-42006030)
chr3 (6-54)||(46429434-46429482)
chr3 (8-92)||(47767432-47767516)
chr3 (8-95)||(53129831-53129918)
chr3 (9-54)||(332051-332096)
chr3 (10-95)||(34088568-34088653)
chr3 (8-92)||(37054394-37054478)
chr3 (8-95)||(671607-671694)
chr3 (17-92)||(28092214-28092289)
chr3 (8-94)||(7302344-7302430)
chr3 (1-54)||(27251932-27251985)
chr3 (17-98)||(46429480-46429561)
chr3 (8-84)||(19475824-19475900)
chr3 (8-92)||(48947605-48947689)
chr3 (8-92)||(53470417-53470501)
chr3 (36-95)||(46001361-46001420)
chr3 (38-96)||(35279920-35279978)
chr3 (1-95)||(40929605-40929698)
chr3 (1-54)||(28092282-28092335)
chr3 (8-92)||(30767104-30767189)
chr3 (35-96)||(42130688-42130749)
chr3 (35-92)||(47284328-47284385)
chr3 (6-54)||(25655370-25655418)
chr3 (6-50)||(47284268-47284312)
chr3 (17-92)||(39110394-39110469)
chr3 (8-74)||(30766571-30766637)
chr3 (28-86)||(44288467-44288525)
chr3 (17-55)||(44436342-44436380)
chr3 (17-54)||(332012-332049)
chr3 (8-96)||(7976543-7976632)
chr3 (17-90)||(39215922-39215995)
chr3 (8-89)||(52527039-52527120)
chr3 (8-92)||(31189385-31189469)
chr3 (6-54)||(38506862-38506910)
chr3 (8-55)||(13176550-13176597)
chr3 (17-92)||(31070490-31070565)
chr3 (58-97)||(47284223-47284262)
chr3 (8-54)||(2104772-2104818)
chr3 (58-92)||(46429414-46429448)
chr3 (17-54)||(25655335-25655372)
chr3 (48-92)||(2732639-2732683)
chr3 (58-90)||(27485474-27485506)
chr3 (58-94)||(37321623-37321659)
chr3 (6-50)||(39215880-39215924)
chr3 (58-94)||(54761584-54761620)
[»] chr4 (58 HSPs)
chr4 (1-92)||(36455907-36455998)
chr4 (6-92)||(1107125-1107211)
chr4 (6-90)||(7352814-7352898)
chr4 (6-92)||(15660256-15660342)
chr4 (6-87)||(28845876-28845957)
chr4 (6-98)||(10128047-10128139)
chr4 (9-92)||(41498489-41498573)
chr4 (17-95)||(4896716-4896794)
chr4 (14-95)||(36456007-36456088)
chr4 (8-92)||(2125857-2125941)
chr4 (8-92)||(31473849-31473933)
chr4 (6-94)||(42844541-42844629)
chr4 (13-92)||(14982280-14982359)
chr4 (17-92)||(28845955-28846030)
chr4 (17-92)||(49111396-49111471)
chr4 (18-96)||(1112601-1112679)
chr4 (10-92)||(55266852-55266934)
chr4 (28-96)||(7352907-7352975)
chr4 (6-65)||(857266-857325)
chr4 (17-92)||(857323-857398)
chr4 (8-89)||(10633035-10633116)
chr4 (19-92)||(11040968-11041040)
chr4 (18-94)||(41498575-41498651)
chr4 (35-97)||(4896643-4896705)
chr4 (8-84)||(1539649-1539725)
chr4 (35-95)||(15660180-15660240)
chr4 (8-54)||(11041042-11041088)
chr4 (15-92)||(1112704-1112781)
chr4 (34-91)||(4441338-4441395)
chr4 (23-92)||(11348327-11348396)
chr4 (17-98)||(26250903-26250984)
chr4 (8-92)||(16516171-16516255)
chr4 (6-54)||(26250982-26251030)
chr4 (8-92)||(35470122-35470206)
chr4 (8-94)||(41139473-41139557)
chr4 (17-90)||(10127976-10128049)
chr4 (1-54)||(12914066-12914119)
chr4 (8-65)||(29091164-29091221)
chr4 (17-96)||(1107047-1107127)
chr4 (28-100)||(5715736-5715808)
chr4 (6-74)||(12169037-12169104)
chr4 (35-90)||(42844645-42844700)
chr4 (43-93)||(31742874-31742924)
chr4 (8-54)||(42775643-42775689)
chr4 (58-94)||(14982386-14982422)
chr4 (8-55)||(26534530-26534577)
chr4 (35-90)||(31742778-31742833)
chr4 (8-90)||(19461725-19461807)
chr4 (58-92)||(26251016-26251050)
chr4 (8-94)||(42776635-42776721)
chr4 (8-54)||(53760779-53760825)
chr4 (17-54)||(4441412-4441449)
chr4 (17-50)||(14982363-14982396)
chr4 (45-90)||(42542979-42543024)
chr4 (8-94)||(31947588-31947675)
chr4 (58-90)||(42775625-42775657)
chr4 (8-68)||(46242533-46242593)
chr4 (58-90)||(46724231-46724263)
[»] chr2 (53 HSPs)
chr2 (6-92)||(784866-784952)
chr2 (1-92)||(10244177-10244268)
chr2 (6-94)||(27033488-27033576)
chr2 (6-92)||(41461588-41461674)
chr2 (17-94)||(14365698-14365775)
chr2 (8-90)||(11532242-11532324)
chr2 (8-90)||(11793897-11793979)
chr2 (9-92)||(14365777-14365858)
chr2 (17-93)||(14537198-14537274)
chr2 (8-92)||(45094460-45094544)
chr2 (8-95)||(10480116-10480203)
chr2 (6-86)||(40026070-40026150)
chr2 (17-92)||(11716408-11716483)
chr2 (15-94)||(17180295-17180374)
chr2 (8-95)||(33189246-33189333)
chr2 (8-94)||(769034-769120)
chr2 (1-54)||(14537267-14537320)
chr2 (8-92)||(1583798-1583882)
chr2 (8-94)||(11141303-11141389)
chr2 (9-55)||(14954343-14954389)
chr2 (1-54)||(3345783-3345836)
chr2 (35-95)||(11684596-11684656)
chr2 (6-54)||(11824753-11824801)
chr2 (8-92)||(13017779-13017863)
chr2 (8-98)||(35047668-35047758)
chr2 (9-89)||(28740599-28740679)
chr2 (8-84)||(30698289-30698365)
chr2 (8-95)||(3092279-3092366)
chr2 (17-95)||(784790-784868)
chr2 (8-94)||(39630223-39630308)
chr2 (17-95)||(41461512-41461590)
chr2 (35-84)||(11716501-11716550)
chr2 (17-90)||(44256191-44256263)
chr2 (8-94)||(7228001-7228087)
chr2 (22-92)||(8735844-8735914)
chr2 (8-54)||(8736430-8736476)
chr2 (9-55)||(11607258-11607304)
chr2 (17-95)||(17905651-17905729)
chr2 (17-54)||(11684674-11684711)
chr2 (17-94)||(14954264-14954341)
chr2 (8-65)||(32839637-32839694)
chr2 (58-98)||(3345757-3345797)
chr2 (58-101)||(11824787-11824830)
chr2 (58-97)||(14537306-14537345)
chr2 (58-97)||(19231306-19231345)
chr2 (8-66)||(7167656-7167714)
chr2 (9-55)||(11595356-11595402)
chr2 (8-54)||(20935744-20935790)
chr2 (17-54)||(11824718-11824755)
chr2 (10-91)||(30751338-30751418)
chr2 (58-94)||(11684697-11684733)
chr2 (6-54)||(21504488-21504536)
chr2 (8-52)||(44255674-44255718)
[»] chr6 (24 HSPs)
chr6 (1-98)||(6919776-6919872)
chr6 (6-92)||(9285647-9285733)
chr6 (6-95)||(776153-776242)
chr6 (6-90)||(9763014-9763098)
chr6 (26-96)||(8574758-8574828)
chr6 (8-98)||(34244969-34245059)
chr6 (17-90)||(6919710-6919783)
chr6 (26-98)||(8574689-8574761)
chr6 (8-95)||(28918162-28918249)
chr6 (8-98)||(29889423-29889513)
chr6 (8-92)||(13487275-13487359)
chr6 (35-94)||(9763114-9763173)
chr6 (18-88)||(15299510-15299579)
chr6 (8-92)||(1368477-1368561)
chr6 (25-92)||(776080-776147)
chr6 (59-95)||(1195348-1195384)
chr6 (20-79)||(15299412-15299471)
chr6 (8-54)||(8475199-8475245)
chr6 (58-92)||(33733432-33733466)
chr6 (9-54)||(1195371-1195416)
chr6 (58-95)||(8475176-8475213)
chr6 (17-54)||(9285731-9285768)
chr6 (8-88)||(15832470-15832550)
chr6 (8-64)||(31412929-31412985)
[»] scaffold0048 (1 HSPs)
scaffold0048 (10-90)||(82945-83025)
[»] scaffold0009 (2 HSPs)
scaffold0009 (13-92)||(41997-42076)
scaffold0009 (35-94)||(42080-42139)
[»] scaffold0169 (1 HSPs)
scaffold0169 (8-96)||(4071-4159)
[»] scaffold0129 (2 HSPs)
scaffold0129 (9-97)||(19193-19280)
scaffold0129 (18-90)||(19784-19855)
[»] scaffold0400 (1 HSPs)
scaffold0400 (8-91)||(4487-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (8-91)||(5131-5214)
[»] scaffold0318 (1 HSPs)
scaffold0318 (8-92)||(2867-2950)
[»] scaffold0027 (1 HSPs)
scaffold0027 (8-91)||(10887-10970)
[»] scaffold0301 (1 HSPs)
scaffold0301 (8-90)||(7153-7235)
[»] scaffold0337 (1 HSPs)
scaffold0337 (8-94)||(15855-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (8-94)||(2897-2980)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-55)||(130391-130438)
[»] scaffold0240 (2 HSPs)
scaffold0240 (8-54)||(17574-17620)
scaffold0240 (58-92)||(17606-17640)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-92)||(109049-109083)


Alignment Details
Target: chr8 (Bit Score: 154; Significance: 9e-82; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 12605313 - 12605160
Alignment:
Q  91 cttagggtgatcattctgaattctgatcacttgctatccgttctagagtctatcctttgatatgttgatataagattacatataactgaagtgccagatg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12605313 cttagggtgatcattctgaattctgatcacttgctatccgttctagagtctatcctttgatatgttgatataagattacatataactgaagtgccagatg 12605214  T
Q  191 cataaaatgtgtaatgttatcattacatggttcctgaactatttatttctgcct 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12605213 cataaaatgtgtaatgttatcattacatggttcctgaactatttatttctgcct 12605160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14800028 - 14800119
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14800028 gtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 4156240 - 4156324
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  4156240 ttcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 17110942 - 17111034
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| | ||||||||||||||||| |||||    
T  17110942 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactctaagggt 17111034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 3853702 - 3853616
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  3853702 ttcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 3858160 - 3858074
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  3858160 ttcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 33377296 - 33377384
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagg 33377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 33902748 - 33902667
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  33902748 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 44889438 - 44889354
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 11744717 - 11744804
Alignment:
Q  7 tcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||  ||||||| |||||||| | ||||||||||||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 17110944 - 17110866
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||| || ||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 42711364 - 42711441
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||| || ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 40046877 - 40046798
Alignment:
Q  19 attcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||| || ||||||||||||||||||||||||||||  ||||||||||| ||||  |||||||||||||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagggt 40046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 23011818 - 23011732
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||  ||||||||||| |||| ||| ||||||||||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 29482806 - 29482888
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  29482806 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 13404900 - 13404976
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatcca 82  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  13404900 ttcaaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 24045044 - 24044960
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 29257350 - 29257434
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||    
T  29257350 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 36103185 - 36103097
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||  ||||||| | |||||| ||||||| ||| |||||||||  ||||||||||| ||||| |||||||||||||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 44346677 - 44346757
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||    
T  44346677 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 33986087 - 33986001
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||  ||||||||| |||||| |||||||| ||||||||||||  || | |||| | ||||||||||||||||||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 8049338 - 8049269
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattccccc 77  Q
    ||||||||  |||| |||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 13404902 - 13404829
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  13404902 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 35979003 - 35979084
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    |||||||| |||||||||| |||||| ||||||||||||  || ||||  ||||||||||| ||||| ||||||||||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 28324661 - 28324745
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  |||||| || || ||| ||||||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 14321 - 14235
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||  ||||||||  |||||| ||||||||||| |||||||||  ||||||| ||| ||| |||||||||||||||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacatt-ccccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 14991749 - 14991690
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||| |||||||||||||  || |||||||| |||||||||||||||||||||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 32626066 - 32626027
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattat 56  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32626066 gaattcaccttaaagtagttgaattccctcaaaacattat 32626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 37268091 - 37268166
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||| ||| || || ||||||||||||||||||  || |||||||||||||||| |||||||||||||||    
T  37268091 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 8689204 - 8689138
Alignment:
Q  20 ttcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaaca 86  Q
    |||| |||||||||||||||||||||||||||||||  |||| |||||| ||| | |||||||||||    
T  8689204 ttcatcttaaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 33902750 - 33902831
Alignment:
Q  17 gaattcaccttaaagtagtt-gaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||||| ||||||||| ||||||||||||||||  |  ||||||||||  |||||||||||| ||||||||||||||||    
T  33902750 gaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctcaaac-attcccccatcccaacacactcttagggt 33902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 3853700 - 3853773
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||| ||||||||  || |||||||||||| |||||||||||||||||    
T  3853700 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 3858158 - 3858231
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||| ||||||||  || |||||||||||| |||||||||||||||||    
T  3858158 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 515531 - 515615
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||| | |||||| ||||| ||||| |||||||||  |||| |||||| ||||| |||||||||||||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 31807484 - 31807409
Alignment:
Q  16 agaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| ||| || ||||||||||||||||||||||||  || |||||||| |||| | ||||||||||||||||    
T  31807484 agaattcaactttaaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 32626069 - 32626120
Alignment:
Q  44 ctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 14800013 - 14799975
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  14800013 ttccctcaaaacattcccccatccaaacacactcttagg 14799975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 38573468 - 38573514
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaaca 52  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||    
T  38573468 ttcaaacaatagaattcaactcaaagtagttgaatttcctcaaaaca 38573514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 30435321 - 30435365
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
T  30435321 aaacaatagaatttaccttaaa-tagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 29611422 - 29611382
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  29611422 ttccctcaaaacattcccccatccaaacacactctaagggt 29611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 42740013 - 42739969
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| |||||| || |||||||||||||||||||||||||||    
T  42740013 aacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 13144667 - 13144620
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacatta 13144620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 15186816 - 15186863
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||||||||||||||||||| || |||||||  ||||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacatta 15186863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 27322687 - 27322734
Alignment:
Q  47 aaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||  ||||||||||| |||| ||||||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 1088276 - 1088362
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| ||||| |||  ||| || ||||||| |||||||||| ||  ||| ||||||| ||||| ||| |||||||||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||  ||||||||| |||||| ||||||||||||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 34008833 - 34008799
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  34008833 ttccctcaaaacattcccccatccaaacacactct 34008799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8689207 - 8689244
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacatta 8689244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 30444964 - 30445001
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  30444964 ttccctcaaaacattcctccatccaaacacactcttag 30445001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Original strand, 7202921 - 7202949
Alignment:
Q  26 ttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||||||||||    
T  7202921 ttaaagtagttgaattccctcaaaacatt 7202949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 30435306 - 30435250
Alignment:
Q  32 tagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||| | |||||||||||||    
T  30435306 tagttaaattccctccaaacattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36625256 - 36625292
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||||||||||  ||||||||||||||||||    
T  36625256 ttccctcaaaatattccttcatccaaacacactctta 36625292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 42739983 - 42739947
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  42739983 ttccctcaaaacattcctccatccaaacacactctta 42739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9764429 - 9764335
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9764429 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15374028 - 15374121
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  15374028 gtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 22767036 - 22766952
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20523201 - 20523291
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  20523201 gtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 40643891 - 40643980
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  40643891 ttcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 40643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2316470 - 2316376
Alignment:
Q  1 gtgagttcaaacaatagaattcacctt-aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||    
T  2316470 gtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 37722880 - 37722970
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaagggt 37722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 3563363 - 3563278
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||    
T  3563363 ttcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 26281262 - 26281339
Alignment:
Q  15 tagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 40809416 - 40809336
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||| || ||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttaggg 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 2721557 - 2721628
Alignment:
Q  19 attcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 25935276 - 25935363
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||| |||||| ||||||| ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 40090400 - 40090487
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||| |||||| ||||||||| |||||||||||  || |||||||| ||||||||||||||||||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 15804397 - 15804316
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||| || ||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||| |||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactctcagggt 15804316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32390063 - 32389974
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||  |||| |||||| |||||| ||||||||||||||    
T  32390063 gtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 41762201 - 41762289
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagg 41762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 927386 - 927299
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| ||| ||||||||||||||||||||||    
T  927386 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 9764426 - 9764497
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||| ||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 15374035 - 15373960
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||  |||||||||||||||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 23092041 - 23091963
Alignment:
Q  13 aatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||| |||||||||||    
T  23092041 aatagaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaatatt-ccccatcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 34982288 - 34982210
Alignment:
Q  19 attcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||||||||| |||||||||||||||||||| |  ||||||||||| ||||||| |||||||||||||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagggt 34982210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 32250084 - 32250169
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| ||||||| || || ||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacatt-ccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 32390056 - 32390134
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||| |  ||||||||||||||||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 32470968 - 32470878
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||| ||||||||| |||||||| |||||||||||| |||||||||||  ||||||||||| ||| | ||||||||| |||||||||||    
T  32470968 ttcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactcttagg 32470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 40809414 - 40809500
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||  ||| ||||||| ||| ||||||| |||||||||||    
T  40809414 ttcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 16515099 - 16515180
Alignment:
Q  14 atagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||| |||| |||||||||||||||||||||||  |||||| |||| |||| | |||||||||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6634082 - 6634170
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    |||| ||||||||||||||||||||| |||||||||||| ||| | |||| ||||  ||||||| |||| |||||||||||||||||||    
T  6634082 gtgaattcaaacaatagaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 22303856 - 22303940
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 33245366 - 33245446
Alignment:
Q  16 agaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||| |||||||||||||||||  ||||||||||||  |||| |||||| |||||||||||||||||||||| ||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 20523208 - 20523133
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| |||||||||||||||||||| || ||||  ||||||||||| |||| ||||||||||||||||||    
T  20523208 gaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 19533893 - 19533975
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||||||  ||||||||||| ||||| |||||||||||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 23092046 - 23092123
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||| || |||||||||||| |||||||||||||||  |||  |||||| |||||||||||||||||||||||||    
T  23092046 gaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 6634072 - 6634012
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 9894308 - 9894388
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    |||||||| |||||||||| |||||| |||||||||||   |||||||  ||||||||||| |||||||||||||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 37145487 - 37145569
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||  ||||||||| |||||| |||||||| |||| |||||||  ||||||||||| |||||||||||||||| ||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  37 gaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 28828431 - 28828504
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 2316463 - 2316537
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||||||||||||||| ||||||||||||  ||||||||||| |||   |||||||||||||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 16515081 - 16515009
Alignment:
Q  15 tagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    |||||||||||| |||| ||||||||||||||||||| |||  ||||||||||| ||| | |||||||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 2550362 - 2550322
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  2550362 ttccctcaaaacattcccccatccaaacacactcttagggt 2550322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 13243514 - 13243451
Alignment:
Q  37 gaattccctcaaaacattattttccctcaaaatattcccccatc--caaacacactcttagggt 98  Q
    |||||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagggt 13243451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 15270838 - 15270886
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  15270838 ttcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  38 aattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||||||  ||||||||||| ||| |||||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 17542345 - 17542393
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  17542345 ttcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 32470966 - 32471039
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||| || ||||||||||||||||||||||||||||  |||||||  || ||| || ||||||||||||||||    
T  32470966 gaattcaactcaaagtagttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacactct 32471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 13243514 - 13243561
Alignment:
Q  43 cctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 22305146 - 22305109
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  22305146 ttccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacat 53  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 35379423 - 35379344
Alignment:
Q  12 caatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||| ||||||| | |||| | |||||||||||||||||||||  ||  ||||||| ||| |||||||||||||||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacatt-ccccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 5658821 - 5658770
Alignment:
Q  47 aaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||||  ||||||||||| ||| | |||||||||||||||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttagggt 5658770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10314733 - 10314646
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||||| | ||| || ||||||||||| |||| ||||  || | |||||| ||| | ||||||||||| ||||||||    
T  10314733 caaacaatagaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactcttag 10314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 34982293 - 34982328
Alignment:
Q  19 attcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||| |||||||||||||||||||||    
T  34982293 attcaccttaaagtggttgaattccctcaaaacatt 34982328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 33146095 - 33146061
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  33146095 ttccctcaaaacattcccccatccaaacacactct 33146061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 33146225 - 33146191
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  33146225 ttccctcaaaacattcccccatccaaacacactct 33146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 11601123 - 11601058
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattc 73  Q
    |||| |||| ||||||||| ||| || ||||||||| |||||||||||| || ||| |||||||||    
T  11601123 caaataataaaattcacctcaaattatttgaattccttcaaaacattatattaccttaaaatattc 11601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacat 53  Q
    |||||||| |||||||||| ||| || |||||||||||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 15270872 - 15270908
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  15270872 ttccctcaaaacattcctccatccaaacacactctta 15270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 22302573 - 22302533
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||| ||| ||||||||||||||||||| |||||    
T  22302573 ttccctcaaaacattaccccatccaaacacactctaagggt 22302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 28489511 - 28489479
Alignment:
Q  62 ctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||||||||||| |||||    
T  28489511 ctcaaaatattcccccatccaaacacaatctta 28489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4038143 - 4038234
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4038143 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15034750 - 15034657
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  15034750 gtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 34756513 - 34756422
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||| ||||    
T  34756513 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctctaaggg 34756422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 23536142 - 23536065
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 45565477 - 45565397
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||    
T  45565477 aaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 15034743 - 15034818
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 38277498 - 38277412
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||| | |||||||||||||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27804333 - 27804426
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| |||||||||||||||||| ||||||||||||||||||| || ||||||||  || |||||||| ||||| |||||||||||||||||||    
T  27804333 gtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28745887 - 28745799
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||    
T  28745887 gtgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 24273209 - 24273293
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 50005165 - 50005077
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||||  ||| |||||||||||||  ||||||||||||||||||    
T  50005165 ttcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 8224852 - 8224762
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||| |||||||| | |||||| || ||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagggt 8224762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 26501068 - 26501154
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 4038146 - 4038073
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 27935569 - 27935649
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||| || |||||||||||||| |||||||||||||  ||||||||||||||| | ||||||||||||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttaggg 27935649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 29446828 - 29446745
Alignment:
Q  13 aatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||| |||||| |||||||| | |||||||||||||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttaggg 29446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 47165201 - 47165285
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||| ||| | |||||||||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 30190220 - 30190295
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||| |||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5474467 - 5474521
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5474467 gtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 5474521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 15245528 - 15245480
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15245528 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 27804340 - 27804269
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    |||||||||| ||| ||||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 6470673 - 6470759
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| |||| ||||| |||| | |||||||||||||||||||||  ||| ||||||| ||||| |||||||||||||||||    
T  6470673 ttcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 44410397 - 44410311
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| |||||||||||||||| ||| ||||||||||| || |||||||||  ||||||||||| |||| |||||||||| |||||||    
T  44410397 ttcagacaatagaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23536135 - 23536188
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23536135 gtgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 28632575 - 28632663
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||||||| |||||||||| |||||| |||||||| ||||||||||||  ||||||| ||| |||||| |||||||||||||| ||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattaggg 28632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 34756511 - 34756584
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  34756511 gaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 40264114 - 40264187
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  40264114 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 32573008 - 32572960
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32573008 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 43622977 - 43623057
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||| |||||| || ||||  ||||||||||||  |||| |||||| |||||||||||||||||||||||||||||    
T  43622977 aattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagggt 43623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17502248 - 17502301
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17502248 gtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 31166396 - 31166303
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggtg 99  Q
    |||||||||||||||||| || ||| || ||| ||||| |||||||||||  ||  ||||||| |||||| |||||||||||||||||| ||||    
T  31166396 ttcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactcttaaggtg 31166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 37447891 - 37447968
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaac 85  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||  ||||||| ||||||||||| ||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 50005163 - 50005236
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||||||||||||||||  || |||||||||||||| |||||||||||||||    
T  50005163 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 32573024 - 32573080
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||    
T  32573024 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 40264116 - 40264068
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||    
T  40264116 ttcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 44410413 - 44410473
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||||| |||  || |||||||||||||||| ||||||||||||||||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 39887211 - 39887124
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||| | |||||| ||||||| | ||||||||| || |||||| |||| |||||| |||| ||||||||||||||    
T  39887211 caaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacacactcttag 39887124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 44570762 - 44570687
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaa 83  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||| |||||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 49659300 - 49659214
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||| |||||| || |||||||||  |||||||  ||||||||| | ||||||| ||||||||||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattcccc-atccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 28745880 - 28745950
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 87  Q
    |||||||||| ||| ||||||||||||||||||| ||||  |||||| ||||||||| | |||||||||||    
T  28745880 gaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 32287942 - 32288007
Alignment:
Q  28 aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctt 93  Q
    |||||| ||||||| |||||||||||||  |||||||||||  |||| ||||||||||||||||||    
T  32287942 aaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 27935571 - 27935523
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  27935571 ttcaaacaatagaattcacctgaaagtagttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 37214892 - 37214939
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  37214892 ttcaaacaatagaattcacctcaa-gtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 38277504 - 38277571
Alignment:
Q  22 caccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||| ||| || |||||||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  38277504 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatatt-ccccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 37036940 - 37037019
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    |||||| ||||| || | ||| || |||||||||||||||||||||  ||| ||||||| |||||| |||||||||||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaa 83  Q
    |||||||| |||||||| | |||||| || ||||||||||||||||||  ||| ||||||| |||||| |||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 15245494 - 15245456
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15245494 ttccctcaaaacattcccccatccaaacacactcttagg 15245456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 34003461 - 34003379
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||| |||||||||| |||||| |||||| ||||||||| ||||| || | | ||||||||| | ||||||||||||||    
T  34003461 caaataatggaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacact 34003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 34007442 - 34007480
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34007442 ttccctcaaaatatttccccatccaaacacactcttagg 34007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41822532 - 41822578
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  41822532 caaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 5474451 - 5474414
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5474451 ttccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 31195540 - 31195468
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatc 80  Q
    |||||||| |||||||||| ||| || || |||| ||||| |||||||  ||||||||||||||||| |||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcctccatc 31195468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 45565479 - 45565515
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45565479 aattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 41823181 - 41823220
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  41823181 ttccttcaaaacattcccccatccaaacacactcttaggg 41823220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 50471834 - 50471791
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaac 51  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  50471834 caaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 32572974 - 32572940
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  32572974 ttccctcaaaacattcccccatccaaacacactct 32572940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 34007392 - 34007358
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||| |||||||||||||||||||    
T  34007392 ttccctcaaaatatttccccatccaaacacactct 34007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 44571285 - 44571239
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 52280972 - 52281010
Alignment:
Q  38 aattccctcaaaacattattttccctcaaaatattcccc 76  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  52280972 aattccctcaaaacattactttccctcaaaagattcccc 52281010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 17502228 - 17502195
Alignment:
Q  62 ctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||| |||||||||||||||||||    
T  17502228 ctcaaaatattccctcatccaaacacactcttag 17502195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| |||||||||  |||||| ||||||||||||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 50471802 - 50471765
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||  |||||||||||||||||||||||||    
T  50471802 ttccctcaaaactttcccccatccaaacacactcttag 50471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 51847935 - 51847855
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    ||||| || |||||||||| |||||| ||||||| | | |||||||||  || |||||||| ||||| ||||||||||||||    
T  51847935 caaacgatggaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 40264082 - 40264046
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  40264082 ttccctcaaaacattcccctatccaaacacactctta 40264046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 496 - 402
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  496 gtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 493 - 562
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2097 - 2191
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2097 gtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 2100 - 2031
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 56342 - 56429
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  56342 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 56345 - 56311
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||| ||||||||||||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacatta 56311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2057463 - 2057554
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2057463 gtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 40110820 - 40110735
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  40110820 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34388356 - 34388262
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  34388356 gtgagttcaaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 5644764 - 5644674
Alignment:
Q  5 gttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||||||    
T  5644764 gttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 43955596 - 43955514
Alignment:
Q  13 aatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  43955596 aatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 29065905 - 29065817
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||  |||||||||||||||||||    
T  29065905 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31632808 - 31632719
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| |||||||||| |||||| ||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  31632808 ttcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 18789221 - 18789305
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 43955596 - 43955671
Alignment:
Q  15 tagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  43955596 tagaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 26162112 - 26162196
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 40110822 - 40110902
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||||||||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttaggg 40110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 2057466 - 2057392
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 28539143 - 28539227
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  28539143 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 35776930 - 35777017
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||| ||| |||||||||| |||||| ||||||||||||| |||||||  ||||||||||| |||||| |||||||||||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 39342617 - 39342703
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  39342617 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 44915270 - 44915192
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||||||||| |||| | |||||||||||||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 49052858 - 49052907
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49052858 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 49052907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 6498740 - 6498824
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| | |||||| | |||||| |||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 21635958 - 21636038
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaaca 86  Q
    |||||||||||||||||| || ||||||||| |||||| |||||||||||  ||||||||||| ||| |||||||||||||    
T  21635958 ttcaaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 40854055 - 40854007
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40854055 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 14603237 - 14603324
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| ||||| |||  |||||| ||||||||||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  14603237 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 23455222 - 23455313
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggtg 99  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| |||||| |||||||||||| ||| ||||||    
T  23455222 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacacattctaagggtg 23455313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  23 accttaaagtagttgaattc-cctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44915263 - 44915317
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44915263 gtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacatta 44915317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 46069477 - 46069428
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46069477 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatta 46069428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 23548586 - 23548670
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| ||||||| |||||||||| ||  ||||||||||| ||||| |||||||||||||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 35455888 - 35455804
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| ||||| |||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||    
T  35455888 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 9784906 - 9784989
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||| || ||||||  |||||| |||||||||||||||||| ||  ||||||||||| ||||| ||||||||||||||||    
T  9784906 caaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 3905634 - 3905716
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||||||| |||||| ||||||||| | ||||||||||||| |||||||| ||||  | ||||||| |||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacattcgactatccaaagacact 3905716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 25189201 - 25189287
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||  ||||||| | |||||| ||||||||||||||||||||   || |||||||| |||||| ||||||||||||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29639190 - 29639276
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||| ||| || ||||||| ||||| |||||||  |||||| |||| ||||||||||||| |||||||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 46482032 - 46481943
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||| ||| || ||||| |||| |||||||||||||  |||  || |||||||  |||||||||||||||||||||    
T  46482032 ttcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 40854053 - 40854133
Alignment:
Q  17 gaattcaccttaaagtagttgaattccc-tcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||| || ||||||||||||||||| |||||| ||||  |||||||| || ||| |||||||||||||||||||||||    
T  40854053 gaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttagg 40854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 34388353 - 34388424
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||| |||||  ||| ||||||||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 5644766 - 5644836
Alignment:
Q  22 caccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||| ||| || |||||||||||||||||||||  || ||||||||  ||||||||||||||||||||||    
T  5644766 cacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 21635960 - 21635883
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| ||||| ||| || |||||| ||||||||||||||  || ||||||||||||| ||||||||| ||||||||||    
T  21635960 gaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 29065903 - 29065978
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||| ||| || |||||||||||||||||||||  || ||| |||| ||||| |||||||||||||||||    
T  29065903 gaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 30524319 - 30524253
Alignment:
Q  28 aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||| |||||||||||||||||||||  |||| |||||| ||| | ||||||| |||||||||||    
T  30524319 aaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30587878 - 30587924
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||    
T  30587878 caaacaatggaattcacattaaagtatttgaattccctcaaaacatt 30587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 43791174 - 43791116
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaa 66  Q
    |||||||| || ||||||| |||||| |||||||||||||||||||||  |||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  45 tcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||||  || |||||||||||||| |||||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31913304 - 31913256
Alignment:
Q  6 ttcaaacaatagaatt-caccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31913304 ttcaaacaatagaatttcaccttaaa-tagttgaattccctcaaaacatt 31913256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 49052860 - 49052784
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||| || ||||||||||||||| ||||||||||||  || |||||||| |||  | ||||||||||||||||||    
T  49052860 gaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 30629141 - 30629061
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    ||||||||  ||||||||  |||||| || ||||| || |||||| ||  ||||||||||| |||||||||||||||||||    
T  30629141 caaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 31913270 - 31913234
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31913270 ttccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 40854021 - 40853981
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  40854021 ttccctcaaaacattcccccatccaaacacactctaagggt 40853981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 30080811 - 30080846
Alignment:
Q  61 cctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||| |||||||||||||||||||||||||||    
T  30080811 cctcaaaacattcccccatccaaacacactcttagg 30080846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 45984424 - 45984378
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 45988784 - 45988738
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 30587910 - 30587943
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactc 91  Q
    ||||||||||| ||||||||||||||||||||||    
T  30587910 ttccctcaaaacattcccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5415851 - 5415942
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5415851 gtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44692913 - 44692822
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  44692913 gtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44436349 - 44436254
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  44436349 gtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 49457423 - 49457339
Alignment:
Q  12 caatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 49457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9129435 - 9129342
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  9129435 gtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9137542 - 9137449
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  9137542 gtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 44692906 - 44692987
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagggt 44692987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 5415854 - 5415782
Alignment:
Q  21 tcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctt 93  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 46672799 - 46672875
Alignment:
Q  16 agaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 27251978 - 27252057
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 37321625 - 37321550
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 9129428 - 9129505
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 9137535 - 9137612
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 31070492 - 31070422
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccc 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  31070492 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccc 31070422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 21307520 - 21307600
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||  ||||| ||||| |||||||||||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 36397979 - 36398061
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  36397979 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 42005941 - 42006030
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||||  ||||||||| || ||| || |||||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggg 42006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 46429482 - 46429434
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46429482 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 47767516 - 47767432
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 53129831 - 53129918
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||||||  ||||||| ||| |||||| |||||||||||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 332051 - 332096
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  332051 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 34088653 - 34088568
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| ||| | ||||||||||||||||||||    
T  34088653 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 37054478 - 37054394
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||  |||||| |||| |||||||||||||||||||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 671607 - 671694
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||  ||||||  ||||||||||||||||| ||  ||||||||||| ||||||| ||||||| ||||||||||    
T  671607 caaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 28092289 - 28092214
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| |||||| ||||||||||||||||||| |  || |||||||| ||||||||||||||||| |||||    
T  28092289 gaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 7302430 - 7302344
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||| || |||  |||||||| |||||||||||  ||| ||||||| |||||| ||||||||||||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27251985 - 27251932
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  27251985 gtgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 46429480 - 46429561
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||| ||||| ||| || ||||||||| |||||||||||  || ||||||||||||||| |||||||||||||||| |||||    
T  46429480 gaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactctaagggt 46429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaa 84  Q
    |||||||| |||||||||| |||||| ||||||| ||||| |||||||  ||||||||||| ||||| |||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 48947689 - 48947605
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| |||||||| ||||||||| ||  ||||||||||| ||||  |||||||||||||||||    
T  48947689 caaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 53470417 - 53470501
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||||  |||||| |||||||||||||||||| ||  ||||||||||| ||| || ||||||||||||||||    
T  53470417 caaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  36 tgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| ||||||||  || |||||||||||||| ||||||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 35279920 - 35279978
Alignment:
Q  38 aattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||| ||||||||||||  ||||||||||| ||||||||||||||||||| |||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttagg 35279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 40929698 - 40929605
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||| ||||||||||||||||||  ||||| ||||||||||  |||  |||||||| ||| || |||| ||| ||||||||||||||||||||||    
T  40929698 gtgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaacatt-ccccatccaaacacactcttag 40929605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28092282 - 28092335
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| ||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  28092282 gtgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 30767189 - 30767104
Alignment:
Q  8 caaacaatagaattcacctta-aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||||  ||||| ||||||||| ||| |||||||  ||||||||||| ||| ||||||||||| |||||||    
T  30767189 caaacaatggaattcaccttttaagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaatacactct 30767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 42130749 - 42130688
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    |||||||||||||||||||||  |  |||||||||||||||||| ||||||||||| |||||    
T  42130749 ttgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattagg 42130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 47284328 - 47284385
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||||||  || ||||||||||||| | ||||||||||||||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 25655370 - 25655418
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  25655370 ttcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 47284312 - 47284268
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaa 50  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  47284312 ttcaaacaatagaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 39110469 - 39110394
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||| || ||||||||||||||||| ||||||||||  ||| ||||||| ||| |  ||||||||||||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcc 74  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  28 aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaaca 86  Q
    |||||| ||||||||| |||||||||||| || |||||||| ||||| |||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 44436342 - 44436380
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacatta 44436380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 7976632 - 7976543
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatc-caaacacactcttagg 96  Q
    ||||||||||||||||||| || ||| || |||||| |||||||||||  |||| |||||| |||| | ||||  |||||||||||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatctaaaacacactcttagg 7976543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 39215922 - 39215995
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || |||||||  ||||||||||||| || ||||||||||||| | ||||||||||||||    
T  39215922 gaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 52527120 - 52527039
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    |||||||| ||||| |||| |||||| |||||||||  || |||||||  | || |||||| ||||||||||||||||||||    
T  52527120 caaacaatggaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 31189385 - 31189469
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||| ||| |||| |||| |||||| |||||||| ||||||||||||  || |||||||| |||| | ||| ||||||||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 38506862 - 38506910
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||| ||| || ||||||||||||||||||||    
T  38506862 ttcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 13176550 - 13176597
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  13176550 caaacaatagaatccacctaaaagtctttgaattccctcaaaacatta 13176597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 31070490 - 31070565
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||| ||| || |||||||||||||||||||||  || ||||||||||||| || || |||||| |||||    
T  31070490 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctccaattcaaacatactct 31070565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 47284223 - 47284262
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  47284223 ttccctcaaaatattccctcatccaaacacactctaaggg 47284262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2104818 - 2104772
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 46429448 - 46429414
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  46429448 ttccctcaaaacattcccccatccaaacacactct 46429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 25655372 - 25655335
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| || |||||||||||||||||||||||||||    
T  25655372 gaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 2732683 - 2732639
Alignment:
Q  48 aaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 27485506 - 27485474
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||| |||||||||||||||||||||    
T  27485506 ttccctcaaaacattcccccatccaaacacact 27485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 37321623 - 37321659
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  37321623 ttccctcaaaacattccccaatccaaacacactctta 37321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 39215924 - 39215880
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaa 50  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  39215924 ttcaaacaataaaattcacctcaaagtaattgaattccctaaaaa 39215880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 54761584 - 54761620
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  54761584 ttccctcaaaacattcctccatccaaacacactctta 54761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36455998 - 36455907
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  36455998 gtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 1107125 - 1107211
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1107125 ttcaaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 7352898 - 7352814
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||    
T  7352898 ttcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 15660256 - 15660342
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  15660256 ttcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 28845957 - 28845876
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||| ||||||||||||    
T  28845957 ttcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 10128047 - 10128139
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||| ||||||| |||||    
T  10128047 ttcaaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactctaagggt 10128139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 41498573 - 41498489
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctc-aaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||    
T  41498573 aaacaatagaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 4896716 - 4896794
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 36456007 - 36456088
Alignment:
Q  14 atagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||||||||||| ||||| ||||||||||||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 2125941 - 2125857
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 31473933 - 31473849
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||| ||||||||| |||||| ||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 42844629 - 42844541
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||| ||||||||||| | |||||||||||    
T  42844629 ttcaaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 14982359 - 14982280
Alignment:
Q  13 aatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  14982359 aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 28845955 - 28846030
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 49111396 - 49111471
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 1112679 - 1112601
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||| ||||||||||||||||||| ||||||||  || |||||||| |||||||||||||||||||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttagg 1112601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 55266852 - 55266934
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||  |||||||||||||||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 7352907 - 7352975
Alignment:
Q  28 aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||||||    
T  7352907 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagg 7352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 857325 - 857266
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctca 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  857325 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 857323 - 857398
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||| || ||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 10633116 - 10633035
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11041040 - 11040968
Alignment:
Q  19 attcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatatt-ccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 41498575 - 41498651
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||| ||| || ||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 4896705 - 4896643
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||||||| ||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaaggg 4896643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 1539725 - 1539649
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaa 84  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 15660240 - 15660180
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11041042 - 11041088
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  11041042 caaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 1112704 - 1112781
Alignment:
Q  15 tagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||| ||||||||||||||||||| ||||||||  ||  ||||||| || |||||||||||||| |||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 4441395 - 4441338
Alignment:
Q  34 gttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    ||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||    
T  4441395 gttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 11348327 - 11348396
Alignment:
Q  23 accttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||| ||||| ||||||||||||||||||||||  |||||| |||| ||||||||||||||| |||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 26250984 - 26250903
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||| ||||| ||| || ||||||| |||||||||||||  || ||||||||||||||| |||||||||||||| |||||||    
T  26250984 gaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacactattagggt 26250903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 16516255 - 16516171
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| || ||||| | |||||| || |||||| |||||||||||  |||| |||||| |||||||||||||||||||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 26250982 - 26251030
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  26250982 ttcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 35470206 - 35470122
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||  ||||||||||| ||| | ||||| |||||||||||    
T  35470206 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 41139557 - 41139473
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||  || |||||||    | |||||||||||||||||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaa--gcttccccatccaaacacactctta 41139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 10128049 - 10127976
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||| ||| || ||||||||| |||||||||||  || | ||||||||||||||||||||||||||||    
T  10128049 gaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12914066 - 12914119
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| ||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  12914066 gtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctca 65  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||  ||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1107127 - 1107047
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccc-tcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||| || |||||||||||||||| |||||||||||  ||||| | |||| ||| || ||||||||||||||||||||    
T  1107127 gaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttagg 1107047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 5715808 - 5715736
Alignment:
Q  28 aaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggtga 100  Q
    |||||| ||||||| |||||||||||||  ||  ||||||| |||||| |||||||||||||||| |||||||    
T  5715808 aaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaagggtga 5715736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 12169104 - 12169037
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcc 74  Q
    ||||||||| ||||||||| ||||| |||||||||| | ||||||||||| |||||||||||| |||||    
T  12169104 ttcaaacaacagaattcactttaaaatagttgaatttc-tcaaaacattactttccctcaaaacattcc 12169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 42844645 - 42844700
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||| ||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  42844645 ttgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 31742874 - 31742924
Alignment:
Q  43 cctcaaaacattattttccctcaaaatattcccccatccaaacacactctt 93  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 14982386 - 14982422
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14982386 ttccctcaaaagattcccccatccaaacacactctta 14982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 26534577 - 26534530
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacatta 26534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 31742833 - 31742778
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||||||||||||   | ||| |||||||||| |||||||||||||||    
T  31742833 ttgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 19461725 - 19461807
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||||| |  | ||| || |||||||| ||||||||||||  || | |||||||||| ||||||||||| |||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 26251016 - 26251050
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  26251016 ttccctcaaaacattcccccatccaaacacactct 26251050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 42776721 - 42776635
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||  ||||||||| |||||| |||||||  ||||||||||||  |  ||| |||| ||||  |||||||||||||||||||    
T  42776721 caaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactctta 42776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 53760779 - 53760825
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||| | ||| || ||||||||||||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 4441412 - 4441449
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  4441412 gaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 14982363 - 14982396
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaa 50  Q
    |||||||||| |||||||||||||||||||||||    
T  14982363 gaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  45 tcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||||  ||||||||||| ||||| |||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 31947675 - 31947588
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta---ttttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||| |  ||| ||||||||||||  |||||||   | ||||||||||| |||| |||||||||||| |||||||    
T  31947675 caaacaatggaattcacctca--gtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaacatactctta 31947588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 42775657 - 42775625
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||| |||||||||||||||||||||    
T  42775657 ttccctcaaaacattcccccatccaaacacact 42775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 46242533 - 46242593
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaa 68  Q
    |||||||| |||||||||| |||||| ||  ||||| |||||||||||| || ||||||||    
T  46242533 caaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaa 46242593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 46724231 - 46724263
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||| |||||||||||||||||    
T  46724231 ttccctcaaaatatttccccatccaaacacact 46724263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 784866 - 784952
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  784866 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10244268 - 10244177
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  10244268 gtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 27033576 - 27033488
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  27033576 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 41461588 - 41461674
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  41461588 ttcaaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 14365775 - 14365698
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 11532242 - 11532324
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 11793979 - 11793897
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 14365777 - 14365858
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  14365777 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 14537274 - 14537198
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctt 93  Q
    |||||||||| |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  14537274 gaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 45094460 - 45094544
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||| ||| ||||||||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10480203 - 10480116
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||| |||||| ||||||||||||  |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 40026150 - 40026070
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaaca 86  Q
    ||||||||||||||||||||| |||||| || |||| |||||||||||||| || ||||||||||||||||||| ||||||    
T  40026150 ttcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 11716483 - 11716408
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||  |||||||||||||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 17180374 - 17180295
Alignment:
Q  15 tagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||| || ||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 33189246 - 33189333
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  33189246 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 33189333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 769120 - 769034
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  769120 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14537267 - 14537320
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14537267 gtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 1583798 - 1583882
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||    
T  1583798 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 11141389 - 11141303
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||  ||||||||  |||||| ||||||||||| |||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  11141389 caaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 14954343 - 14954389
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 14954389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3345836 - 3345783
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3345836 gtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 11684656 - 11684596
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 11824753 - 11824801
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11824753 ttcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 13017863 - 13017779
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||| |||||| ||||||||||| |||| ||||  ||||||||||| ||| || ||||||||||||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 35047668 - 35047758
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||| | |||||||||  |||||| ||||||||||| |||||| ||  || |||||||| ||||||||||||||||||||||| |||||    
T  35047668 caaacattggaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactctaagggt 35047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 28740679 - 28740599
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacac 89  Q
    ||||||| ||||| || | |||||| |||||||||||||||||||||  ||||||||||| ||| |||||| |||||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaa 84  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||  ||||||||||| |||||||||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 3092366 - 3092279
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||| ||||| |||  |||||| ||||||| |||||||||| ||  ||||||||||| ||||| ||||||||| ||||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 784868 - 784790
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||| || ||||||||| |||||| |||||||||||  ||||||||||| |||   ||||||||||||||||||||    
T  784868 gaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 39630308 - 39630223
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||||||| ||| ||| || |||||||||||||||||| ||  ||||||||||| ||| | |||| ||||||||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 41461590 - 41461512
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||| ||||| ||| || || ||||||||||||||||||  || |||||||||||| ||||||||||||||||| ||||    
T  41461590 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaa 84  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 44256191 - 44256263
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||| ||| || | |||||||||||||||||||  || ||||||| ||||||||||||||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctcaaa-tattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 7228001 - 7228087
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||  |||| |||| || ||| || |||||| |||||||||||  ||| ||||||| ||| |||||||||||||||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 8735914 - 8735844
Alignment:
Q  22 caccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||| |||||| ||||||||||||  |||||||| ||||||||||| ||   ||||||||||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 11607304 - 11607258
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacatta 11607258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 17905729 - 17905651
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| ||| || ||||||||| | |||||||||  ||| ||||||| |||||| ||||| |||||||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 14954341 - 14954264
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||| || ||||||||||||||||| || |||| ||||  ||| ||||||| ||||| | |||||||||||||||||    
T  14954341 gaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactctta 14954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctca 65  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||  ||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 3345797 - 3345757
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  3345797 ttccctcaaaacattcccccatccaaacacacttttagggt 3345757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 11824787 - 11824830
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttagggtgat 101  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||    
T  11824787 ttccctcaaaacattcccccatccaaacacactttaagggtgat 11824830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 14537306 - 14537345
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14537306 ttccctcaaaacattcccccatccaaacacactctaaggg 14537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 19231306 - 19231345
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  19231306 ttccctcaaaacattcccccatccaaacacaatcttaggg 19231345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaa 66  Q
    ||||||||  ||||||||| |||||| ||||||||| |||||||||||  |||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 11595402 - 11595356
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||| |||||||||| ||| || |||||||||||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacatta 11595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 20935790 - 20935744
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 11824755 - 11824718
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| || |||||||||||||||||||||||||||    
T  11824755 gaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 30751338 - 30751418
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||||||||| |||||| || || ||||| ||||||||||||  ||  ||||||| |||| | |||||||||||||||    
T  30751338 aacaatagaattcatcttaaa-tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 11684697 - 11684733
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactctta 94  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  11684697 ttccctcaaaacattcctccatccaaacacactctta 11684733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21504536 - 21504488
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||||| ||||||| || ||| || ||||||||||||||||||||    
T  21504536 ttcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaaca 52  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6919776 - 6919872
Alignment:
Q  1 gtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6919776 gtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagggt 6919872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 9285733 - 9285647
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  9285733 ttcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 776153 - 776242
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||  || ||||||||||||||||||    
T  776153 ttcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 9763098 - 9763014
Alignment:
Q  6 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||||    
T  9763098 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 8574758 - 8574828
Alignment:
Q  26 ttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||||||||||||||||||  ||| ||||||| ||| |||||||||||||||||||||||    
T  8574758 ttaaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagg 8574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 34244969 - 34245059
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||||||| ||||| || | |||||| |||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||| |||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggt 34245059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 6919783 - 6919710
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||  ||||| |||||||||||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 8574761 - 8574689
Alignment:
Q  26 ttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    ||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||||||||||||| |||||    
T  8574761 ttaaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaagggt 8574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 28918249 - 28918162
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||  ||||||||| |||||| ||||||| ||| |||||||||  ||||||||||| ||||| ||||||||||||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 29889423 - 29889513
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagggt 98  Q
    |||| ||| |||||||| | |||||| |||||||||||||||||||||  |||| |||||| ||||| ||||||||||||||||| |||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaagggt 29889513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 13487359 - 13487275
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||| ||  ||||||||||| ||||||||||| |||||||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 9763114 - 9763173
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 15299510 - 15299579
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    ||||||||| |||||||||||||||| |||||||||||  ||||||||||| ||| |||||||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacatt-ccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 1368561 - 1368477
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||||| |||  | ||||||||||| |||| ||||  ||| ||||||| ||||| |||||||||||||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 776147 - 776080
Alignment:
Q  25 cttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||||||||| |||||||||||||  ||||||||||| ||| | ||||| |||||||||||    
T  776147 cttaaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 1195384 - 1195348
Alignment:
Q  59 tccctcaaaatattcccccatccaaacacactcttag 95  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttag 1195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 15299471 - 15299412
Alignment:
Q  20 ttcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccat 79  Q
    ||||||| ||||||||||||||| ||||||||||||  ||| ||||||| ||||| ||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 8475245 - 8475199
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    |||||||| |||||||||  |||||| ||||||||||||||||||||    
T  8475245 caaacaatggaattcacccaaaagtatttgaattccctcaaaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 33733466 - 33733432
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  33733466 ttccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 8475213 - 8475176
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactcttag 95  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  8475213 ttccctcaaaacatttccccatccaaacacactcttag 8475176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 9285731 - 9285768
Alignment:
Q  17 gaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||| || |||||||||||||||||||||||||||    
T  9285731 gaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 15832550 - 15832470
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacaca 88  Q
    ||||||||  ||||||||  |||||| ||||||||||| |||||||||  |||| || ||| ||| || ||||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacaca 15832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 31412985 - 31412929
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctc 64  Q
    |||||||| |||||||  | |||||| ||||||||||||||||||| || |||||||    
T  31412985 caaacaatggaattcatatcaaagtatttgaattccctcaaaacatcatattccctc 31412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 83025 - 82945
Alignment:
Q  10 aacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 42076 - 41997
Alignment:
Q  13 aatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||| |||| ||||||||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  35 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| ||||||||||||  |||||||||||  ||||||||||||||||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 4159 - 4071
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttagg 96  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||  ||| ||||||| |||||   |||||||||||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 19280 - 19193
Alignment:
Q  9 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttaggg 97  Q
    ||||||| |||||||||| ||| || ||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||| ||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacacttttaggg 19193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19784 - 19855
Alignment:
Q  18 aattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    ||||||||| |||||| |||||||  || |||||||||  ||||||||||| | |||||||||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4487 - 4570
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||| |||||||||  ||| || ||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 5131 - 5214
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||| |||||||||  ||| || ||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 2950 - 2867
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 92  Q
    |||||||| |||||||||| ||| || |||||||||||||||||||||  ||| ||| ||| ||||||||||| |||||||||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 10970 - 10887
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactc 91  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||  |||||| |||| ||||  |||| |||||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 7235 - 7153
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 90  Q
    |||||||| ||||||||   |||||| ||||||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||    
T  7235 caaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 15855 - 15938
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||  ||||| ||||| | |||||||||||||||||||||||    
T  15855 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2897 - 2980
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactctta 94  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||  ||||| ||||| | |||||||||||||||||||||||    
T  2897 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 2980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 130438 - 130391
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 55  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  130438 caaacaatagaatccacctaaaagtctttgaattccctcaaaacatta 130391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17574 - 17620
Alignment:
Q  8 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 54  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||||||||    
T  17574 caaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 17606 - 17640
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  17606 ttccctcaaaacattcccccatccaaacacactct 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 109083 - 109049
Alignment:
Q  58 ttccctcaaaatattcccccatccaaacacactct 92  Q
    ||||||||||| |||||||||||||||||||||||    
T  109083 ttccctcaaaacattcccccatccaaacacactct 109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University