View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13221_high_4 (Length: 465)

Name: NF13221_high_4
Description: NF13221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13221_high_4
NF13221_high_4
[»] chr5 (25 HSPs)
chr5 (171-416)||(26620062-26620307)
chr5 (1-181)||(31680339-31680519)
chr5 (1-172)||(12278875-12279047)
chr5 (1-172)||(17332566-17332738)
chr5 (1-172)||(31501731-31501903)
chr5 (5-165)||(37254628-37254789)
chr5 (1-138)||(33430335-33430473)
chr5 (1-152)||(10033927-10034079)
chr5 (1-152)||(13817977-13818129)
chr5 (1-152)||(39657521-39657673)
chr5 (1-151)||(26283333-26283484)
chr5 (1-152)||(36293636-36293788)
chr5 (1-150)||(1776391-1776541)
chr5 (1-173)||(36291350-36291523)
chr5 (1-152)||(39434696-39434848)
chr5 (1-134)||(16155015-16155149)
chr5 (2-152)||(3155647-3155798)
chr5 (1-122)||(16333891-16334013)
chr5 (1-150)||(19985941-19986091)
chr5 (1-133)||(43068896-43069029)
chr5 (27-139)||(28801300-28801415)
chr5 (122-172)||(26543902-26543952)
chr5 (103-170)||(202621-202688)
chr5 (140-172)||(4307238-4307270)
chr5 (140-172)||(15917017-15917049)
[»] chr7 (21 HSPs)
chr7 (5-163)||(34389075-34389234)
chr7 (1-171)||(37002159-37002330)
chr7 (1-173)||(26624724-26624898)
chr7 (1-164)||(8867746-8867910)
chr7 (1-172)||(43184483-43184655)
chr7 (1-151)||(14777122-14777273)
chr7 (1-143)||(35090177-35090320)
chr7 (1-152)||(5555487-5555639)
chr7 (1-172)||(33685544-33685716)
chr7 (1-149)||(3114111-3114260)
chr7 (1-172)||(7002705-7002877)
chr7 (1-172)||(7048576-7048748)
chr7 (1-152)||(8394125-8394277)
chr7 (1-152)||(36630816-36630968)
chr7 (1-134)||(36658199-36658333)
chr7 (1-129)||(38638251-38638380)
chr7 (1-133)||(40920018-40920151)
chr7 (27-86)||(10868514-10868575)
chr7 (107-164)||(10876829-10876886)
chr7 (116-165)||(37966614-37966663)
chr7 (171-243)||(2654433-2654505)
[»] chr4 (41 HSPs)
chr4 (1-175)||(3292911-3293086)
chr4 (1-172)||(6690250-6690422)
chr4 (1-171)||(30216757-30216928)
chr4 (4-165)||(43143602-43143764)
chr4 (1-172)||(50205092-50205264)
chr4 (4-165)||(42333794-42333956)
chr4 (4-172)||(10352902-10353071)
chr4 (1-164)||(48989316-48989480)
chr4 (1-151)||(20129311-20129462)
chr4 (1-152)||(25930708-25930860)
chr4 (1-151)||(13012189-13012340)
chr4 (1-151)||(47500774-47500925)
chr4 (1-172)||(28877265-28877437)
chr4 (2-172)||(30077647-30077817)
chr4 (1-152)||(36382361-36382512)
chr4 (1-151)||(26439294-26439445)
chr4 (1-151)||(34407299-34407450)
chr4 (1-135)||(44156668-44156803)
chr4 (1-170)||(26448035-26448204)
chr4 (1-149)||(29319720-29319869)
chr4 (1-151)||(43355905-43356056)
chr4 (1-165)||(29995998-29996163)
chr4 (1-128)||(35545977-35546105)
chr4 (5-142)||(17511252-17511391)
chr4 (1-139)||(40529028-40529167)
chr4 (27-163)||(30109945-30110084)
chr4 (1-86)||(6235587-6235672)
chr4 (1-172)||(13392896-13393057)
chr4 (1-172)||(13396035-13396196)
chr4 (27-140)||(48129978-48130087)
chr4 (1-117)||(1817752-1817869)
chr4 (115-173)||(49908782-49908840)
chr4 (115-172)||(5517494-5517551)
chr4 (111-165)||(7769315-7769369)
chr4 (116-172)||(6212029-6212085)
chr4 (53-164)||(45194164-45194276)
chr4 (116-170)||(17554978-17555032)
chr4 (68-173)||(27363340-27363446)
chr4 (115-165)||(50720476-50720526)
chr4 (116-172)||(12680193-12680249)
chr4 (60-127)||(6254569-6254637)
[»] chr3 (19 HSPs)
chr3 (1-165)||(45182968-45183133)
chr3 (1-173)||(6930909-6931082)
chr3 (1-171)||(33040934-33041105)
chr3 (4-165)||(11018230-11018392)
chr3 (2-171)||(45335856-45336025)
chr3 (1-169)||(27935161-27935330)
chr3 (2-173)||(19565517-19565689)
chr3 (1-151)||(22968459-22968610)
chr3 (4-165)||(6503587-6503749)
chr3 (1-152)||(19390146-19390298)
chr3 (1-151)||(6269441-6269592)
chr3 (1-152)||(34084137-34084289)
chr3 (1-151)||(39771791-39771942)
chr3 (1-139)||(40081756-40081893)
chr3 (1-164)||(35514254-35514414)
chr3 (27-130)||(5135291-5135397)
chr3 (115-173)||(6890977-6891035)
chr3 (103-164)||(5354697-5354758)
chr3 (104-152)||(22922157-22922205)
[»] chr6 (13 HSPs)
chr6 (1-172)||(28996710-28996882)
chr6 (1-152)||(18339106-18339258)
chr6 (2-173)||(29743262-29743434)
chr6 (1-151)||(398618-398769)
chr6 (1-152)||(13837821-13837973)
chr6 (1-152)||(34948773-34948925)
chr6 (1-136)||(33229351-33229487)
chr6 (57-165)||(31028435-31028544)
chr6 (68-165)||(24697899-24697997)
chr6 (116-172)||(13646997-13647053)
chr6 (116-172)||(34385519-34385575)
chr6 (115-164)||(21149331-21149380)
chr6 (115-165)||(2753337-2753387)
[»] chr2 (23 HSPs)
chr2 (1-172)||(45418563-45418735)
chr2 (1-171)||(44084618-44084789)
chr2 (1-172)||(8147331-8147504)
chr2 (5-171)||(770975-771147)
chr2 (1-152)||(42439986-42440138)
chr2 (1-149)||(41251649-41251798)
chr2 (1-152)||(32127156-32127308)
chr2 (1-152)||(35962715-35962867)
chr2 (1-151)||(6403819-6403970)
chr2 (4-165)||(8059351-8059513)
chr2 (1-134)||(12756852-12756986)
chr2 (1-149)||(16405603-16405752)
chr2 (1-152)||(17445056-17445206)
chr2 (1-152)||(31581637-31581789)
chr2 (3-146)||(18981622-18981766)
chr2 (16-152)||(2958131-2958267)
chr2 (39-172)||(26237937-26238071)
chr2 (27-172)||(4555250-4555397)
chr2 (1-127)||(2285887-2286014)
chr2 (5-86)||(26162721-26162799)
chr2 (122-173)||(34523219-34523270)
chr2 (27-143)||(7072589-7072710)
chr2 (74-132)||(34905969-34906028)
[»] chr8 (15 HSPs)
chr8 (1-172)||(23402088-23402260)
chr8 (1-165)||(16788040-16788205)
chr8 (4-174)||(34136843-34137014)
chr8 (4-165)||(4403995-4404157)
chr8 (1-152)||(29728401-29728553)
chr8 (1-172)||(36408531-36408703)
chr8 (1-130)||(9877242-9877372)
chr8 (1-152)||(15838286-15838437)
chr8 (1-151)||(39914516-39914666)
chr8 (1-171)||(2729211-2729382)
chr8 (1-138)||(3648809-3648947)
chr8 (27-136)||(3435285-3435397)
chr8 (1-78)||(42231012-42231089)
chr8 (103-168)||(10397158-10397223)
chr8 (60-129)||(40470567-40470637)
[»] chr1 (14 HSPs)
chr1 (5-165)||(35907539-35907700)
chr1 (5-172)||(17445293-17445461)
chr1 (1-151)||(26144256-26144407)
chr1 (1-152)||(32982071-32982223)
chr1 (1-165)||(3828971-3829135)
chr1 (1-148)||(7433449-7433597)
chr1 (9-152)||(42310964-42311108)
chr1 (5-165)||(321396-321557)
chr1 (27-173)||(41972314-41972462)
chr1 (27-173)||(33489666-33489815)
chr1 (115-171)||(31866958-31867014)
chr1 (47-144)||(23313246-23313345)
chr1 (116-172)||(44352614-44352670)
chr1 (103-172)||(48901223-48901291)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-152)||(5230-5382)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-172)||(31460-31632)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-151)||(480472-480623)
[»] scaffold2142 (1 HSPs)
scaffold2142 (1-151)||(523-674)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-133)||(52944-53077)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-152)||(17842-17994)
[»] scaffold0769 (1 HSPs)
scaffold0769 (122-170)||(1259-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (122-159)||(194021-194058)


Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-119; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 171 - 416
Target Start/End: Complemental strand, 26620307 - 26620062
Alignment:
Q  171 tggccttaaacaagccagtagaaaatgatatgaaagattaacttctttgcttgttcaacatgaatacacacaagctgcatcagatcattctttattcacg 270  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  26620307 tggccttaaacaagcaagtagaaaatgatatgaaagattaacttctttgcttgttcaacatgaatacacacaagctgcatcaaatcattctttattcgcg 26620208  T
Q  271 aaaaccaccctttgattattcactcttttactggtttatgttgatgatttgattctggctggaaactccctctccgagttttctttcataaaaagtgttc 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26620207 aaaaccaccctttgattattcactcttttactggtttatgttgatgatgtgattctggctggaaactccctctccaagttttctttcataaaaagagttc 26620108  T
Q  371 tccacacttcatttcaaatcaaggatttaggtcaactcaaatattt 416  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  26620107 tccacgcttcatttcaaatcaaggatttaggtcaactcaaatattt 26620062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 31680519 - 31680339
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  31680519 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 31680420  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctggccttaaac 181  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  31680419 ggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccct-gccttaaac 31680339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12278875 - 12279047
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattag-cttttggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||     
T  12278875 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcctttgggttg 12278974  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  12278975 ggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgccgggcggtgaaaccgcccctg 12279047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17332566 - 17332738
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  17332566 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 17332665  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17332666 ggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgccgggcggtgaaaccgcccctg 17332738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 31501731 - 31501903
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  31501731 atagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 31501830  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  31501831 ggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgccgggcggtgaaaccgcccctg 31501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 37254789 - 37254628
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||| ||||    
T  37254789 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgggtc 37254690  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  37254689 taatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccgagcggtgaaacc 37254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33430473 - 33430335
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  33430473 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 33430374  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgac 138  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  33430373 ggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 10034079 - 10033927
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  10034079 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 10033980  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  10033979 agtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgcc 10033927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 13818129 - 13817977
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  13818129 atagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 13818030  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13818029 agtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgcc 13817977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 39657521 - 39657673
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||     
T  39657521 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 39657620  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||| ||||||||||  |||||| | |||||||||    
T  39657621 agtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgcc 39657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26283333 - 26283484
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | ||||||| | | ||||||||     
T  26283333 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttg 26283432  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26283433 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgc 26283484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36293636 - 36293788
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  36293636 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 36293735  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  36293736 agtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgcc 36293788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1776391 - 1776541
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||  |  ||||||||     
T  1776391 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 1776490  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 150  Q
      | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  1776491 actttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcg 1776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36291523 - 36291350
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||| ||||||||||||  ||||||||||| |||| | |||||| ||||||||||||||||||||||||||| | ||||||| | ||||| |||||    
T  36291523 atagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaatgaacttttaggtta 36291424  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    | ||||||||||||||||||| |||||| ||||| ||||||||||| |||| |||||||||||||| |||||||    
T  36291423 gatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcggcgggcggtgaaaccgcccctgg 36291350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39434848 - 39434696
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| |||||||| | |||||||  |||||| ||||     
T  39434848 atagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaatgggcttttgggttg 39434749  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  39434748 agtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgcc 39434696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 16155149 - 16155015
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | |||||||  |||||| ||||     
T  16155149 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaatgggcttttgggttg 16155050  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccggg 134  Q
     ||||||||||||||||||||||||||||||||||    
T  16155049 agtctaatgtgcaaaaattatcgatcgagcccggg 16155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 3155647 - 3155798
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttag 100  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||| | |||||||   ||||| ||||      
T  3155647 tagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttga 3155746  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    ||| |||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  3155747 gtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgcc 3155798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16333891 - 16334013
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  16333891 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 16333990  T
Q  100 ggtctaatgtgcaaaaattatcg 122  Q
      |||||||||||||||||||||    
T  16333991 aatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19986091 - 19985941
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||||||| | || ||||   ||||| ||||     
T  19986091 atagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaatggacttttgggttg 19985992  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 150  Q
      |||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  19985991 aatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcg 19985941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43069029 - 43068896
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||| ||||| | ||| |||||||||||||||||||||||||||||||||||| | |||||||   ||||| ||||     
T  43069029 atagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttgggttg 43068930  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgg 133  Q
    ||||||||||| ||||||||| ||||||||||||    
T  43068929 ggtctaatgtgaaaaaattattgatcgagcccgg 43068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 28801415 - 28801300
Alignment:
Q  27 cctatttgcgtgtgagaattttcagattg--cccaaatttttctttttgtaagtctgttaattagcttttggttagg-tctaatgtgcaaaaattatcga 123  Q
    |||||||||||||||||||||||| |||   ||||||||||||||||||||||| |||||||  |||||||||| || ||||||||||||||||||||||    
T  28801415 cctatttgcgtgtgagaattttcatatttttcccaaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T
Q  124 tcgagcccgggcgacc 139  Q
    ||||||| ||||||||    
T  28801315 tcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 26543902 - 26543952
Alignment:
Q  122 gatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26543902 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgcccctg 26543952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 202688 - 202621
Alignment:
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccc 170  Q
    ||||||| || |||||||||||||||||||||||||| ||  |||||| |||||||||||||| ||||    
T  202688 ctaatgtacacaaattatcgatcgagcccgggcgaccacctagggtcgtcgggcggtgaaaccgcccc 202621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 4307238 - 4307270
Alignment:
Q  140 gcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||||| ||||||    
T  4307238 gcccggggtcgccgggcggtgaaaccgcccctg 4307270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 15917049 - 15917017
Alignment:
Q  140 gcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||||| ||||||    
T  15917049 gcccggggtcgccgggcggtgaaaccgcccctg 15917017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 4e-73; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 34389075 - 34389234
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  34389075 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttgggtc 34389174  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34389175 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaa 34389234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37002159 - 37002330
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-tta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| ||     
T  37002159 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttggattg 37002258  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| |||||    
T  37002259 ggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgccgggcggtgaaaccgcccct 37002330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26624898 - 26624724
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-tta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||     
T  26624898 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattaacttttggattg 26624799  T
Q  100 ggtctaatgtgcaaaaattatcg-atcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  26624798 ggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggttgccgggcggtgaaaccgcccctgg 26624724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8867746 - 8867910
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-tta 99  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| | | |||||| |||||||| ||     
T  8867746 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaattggcttttggattg 8867845  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8867846 ggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 8867910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 43184483 - 43184655
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  43184483 atagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaattggcttttgggtta 43184582  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
     |||| ||| | ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  43184583 agtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccggaatcgccgggcggtgaaaccgcccctg 43184655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14777122 - 14777273
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||     
T  14777122 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 14777221  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14777222 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgc 14777273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 35090320 - 35090177
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||     
T  35090320 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaattggcttttgggttg 35090221  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgccc 143  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  35090220 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5555639 - 5555487
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |  ||||||  |||||| ||||     
T  5555639 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgggcttttgggttg 5555540  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5555539 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 5555487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 33685716 - 33685544
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||   |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||     
T  33685716 atagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggcttttgggttg 33685617  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||    
T  33685616 ggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgccgggcggtgaaaccgcccctg 33685544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3114111 - 3114260
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  3114111 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 3114210  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 149  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3114211 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtc 3114260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7002877 - 7002705
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||| |||||||| || |||||||| |||||| ||||     
T  7002877 atagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttg 7002778  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||| ||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  7002777 ggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgcccctg 7002705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7048748 - 7048576
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||| |||||||| || |||||||| |||||| ||||     
T  7048748 atagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttg 7048649  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||| ||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  7048648 ggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgcccctg 7048576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8394277 - 8394125
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| | |||||||  |  ||||||||     
T  8394277 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttg 8394178  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8394177 agtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 36630968 - 36630816
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |  ||||||||     
T  36630968 atagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 36630869  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36630868 agtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 36630816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36658333 - 36658199
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| |||||| ||||     
T  36658333 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaattggcttttcggttg 36658234  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccggg 134  Q
    |||| |||||||||||||||||||||||| |||||    
T  36658233 ggtccaatgtgcaaaaattatcgatcgagtccggg 36658199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38638251 - 38638380
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||     
T  38638251 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttg 38638350  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagc 129  Q
    | |||||||||||||||||||| |||||||    
T  38638351 gatctaatgtgcaaaaattatcaatcgagc 38638380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 40920018 - 40920151
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||| |||||    
T  40920018 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggtta 40920117  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgg 133  Q
      ||||||||||||||||||||||||||||||||    
T  40920118 aatctaatgtgcaaaaattatcgatcgagcccgg 40920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 10868514 - 10868575
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaat 86  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||| | |||||||    
T  10868514 cctatttgcgcgtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaat 10868575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 10876829 - 10876886
Alignment:
Q  107 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||  |||||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgccgggaagtgaaac 10876886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 37966614 - 37966663
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||| ||| |||||||| | ||||||||||||||||||||    
T  37966614 attatcgatcgagctcggacgaccgcctgaggtcgccgggcggtgaaacc 37966663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 2654505 - 2654433
Alignment:
Q  171 tggccttaaacaagccagtagaaaatgatatgaaagattaacttctttgcttgttcaacatgaatacacacaa 243  Q
    |||||| |||||||   ||||||||||  ||||||||||||||||||| ||| |||| |||| |||| |||||    
T  2654505 tggcctcaaacaagttggtagaaaatggcatgaaagattaacttctttacttattcatcatggatacgcacaa 2654433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 9e-71; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3292911 - 3293086
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  3292911 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 3293010  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctggcc 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  3293011 ggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtcactgggcggtgaaaccgcccctggcc 3293086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6690250 - 6690422
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||     
T  6690250 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 6690349  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6690350 ggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 6690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30216757 - 30216928
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||     
T  30216757 atagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttg 30216856  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  30216857 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaatccgcccct 30216928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 43143602 - 43143764
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  ||    
T  43143602 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 43143701  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  43143702 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaacc 43143764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 50205092 - 50205264
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||| ||||     
T  50205092 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaattggcttttgggttg 50205191  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    | |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||    
T  50205192 gatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgccggacggtgaaaccgcccctg 50205264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 42333794 - 42333956
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  ||    
T  42333794 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 42333893  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||| || ||||||||||    
T  42333894 ctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgctggacggtgaaacc 42333956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 10352902 - 10353071
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggttaggt 102  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||  |  |||||||| |||    
T  10352902 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgggt 10353001  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  10353002 ctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgcccctg 10353071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 48989480 - 48989316
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttg-gtta 99  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||   |||||| |||     
T  48989480 atagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatggacttttgagttg 48989381  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    ||| |||||||||||||||||||||||| |||||  |||||||||| |||| |||||||||||||    
T  48989380 ggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcgtcgggcggtgaaac 48989316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20129462 - 20129311
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  20129462 atagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 20129363  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20129362 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 20129311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 25930860 - 25930708
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  25930860 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 25930761  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25930760 agtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgcc 25930708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13012340 - 13012189
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| ||| ||||||||     
T  13012340 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 13012241  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13012240 aatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 13012189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 47500925 - 47500774
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||| | ||||||| ||| ||||||||     
T  47500925 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaatgagctttttggttg 47500826  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47500825 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 47500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 28877265 - 28877437
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||||||||||||| ||||     
T  28877265 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaattagcttttaggttg 28877364  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
      |||||||||||||||||||||||| |||||  |||||||| |||||||  ||| |||||||||| ||||||    
T  28877365 aatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtcatcggacggtgaaaccgcccctg 28877437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 30077647 - 30077817
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggttag 100  Q
    ||||||||||||||||||| ||||||||||||| |||| | ||||||||||||| |||||||||||||||||||| | ||||||| | | |||||||| |    
T  30077647 tagtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaatgaactttttggttgg 30077746  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||||||||| ||||||    
T  30077747 gtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcg-cgggcggtgaaaccgcccctg 30077817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36382361 - 36382512
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| | |||||||  |  ||||||||     
T  36382361 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttc-ttttgtaaatgtgttaatggactttttggttg 36382459  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36382460 agtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgcc 36382512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26439294 - 26439445
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | |||||||  |||||| ||||     
T  26439294 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 26439393  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26439394 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 26439445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34407299 - 34407450
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | |||||||  |||||| ||||     
T  34407299 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 34407398  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34407399 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 34407450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44156803 - 44156668
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||| |||||| ||||     
T  44156803 atagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaattggcttttgggttg 44156704  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggc 135  Q
    ||||||||||||||||||||||| | ||||||||||    
T  44156703 ggtctaatgtgcaaaaattatcggttgagcccgggc 44156668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26448204 - 26448035
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||   ||||| |||||    
T  26448204 atagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaatggacttttgggtta 26448106  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccc 170  Q
    | | ||||||||||||||||||||||||| |||| ||| ||| ||| ||||||||||||||||||| ||||    
T  26448105 gatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgccgggcggtgaaaccgcccc 26448035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29319720 - 29319869
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||| | |||||||  | |||| ||||     
T  29319720 atagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgggattttgggttg 29319819  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 149  Q
     |||||||||||||||||||||||||||||| || |||||||| ||||||    
T  29319820 agtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtc 29319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 43356056 - 43355905
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | |||||||  |||||| ||||     
T  43356056 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 43355957  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     ||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  43355956 agtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgc 43355905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 29995998 - 29996163
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    |||||||||| ||||||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||| |||| | |||||||  |  ||||||||     
T  29995998 atagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaatggactttttggttg 29996097  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
     ||||||||| |||||||||||||||||| |||| |||||| ||||| ||| ||||||||||||||    
T  29996098 agtctaatgtacaaaaattatcgatcgagtccggacgaccgtccgggatcgtcgggcggtgaaacc 29996163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35546105 - 35545977
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||     
T  35546105 atagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttgggttg 35546006  T
Q  100 ggtctaatgtgcaaaaattatcgatcgag 128  Q
    ||||| ||| ||||||||| |||||||||    
T  35546005 ggtctgatgcgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 17511252 - 17511391
Alignment:
Q  5 tgtgctaaataaaatt-ccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| | |||||||  |||||| ||||  ||    
T  17511252 tgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagt 17511351  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcc 142  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  17511352 ctaatgtgcaaaaattatcgatcgagtctgggcgaccgcc 17511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40529167 - 40529028
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||| | ||||||| || |||| ||||     
T  40529167 atagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatgagtttttaggttg 40529068  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgacc 139  Q
     || ||||||||||||||||||||||||| |||| |||||    
T  40529067 agtttaatgtgcaaaaattatcgatcgagtccggacgacc 40529028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 30110084 - 30109945
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaattagcttttggttagg-tctaatgtgcaaaaattatcga 123  Q
    ||||||||||||||||| |||||| |||  | |||||||||||||||||||||| |||||||   |||| |||| || ||||||||||||||||||||||    
T  30110084 cctatttgcgtgtgagatttttcatattttgtccaaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcga 30109985  T
Q  124 tcgagcccgggcgaccgcccggggtcgccgggcggtgaaa 163  Q
    ||||| ||||||||||| ||||||||| ||||||||||||    
T  30109984 tcgagtccgggcgaccgtccggggtcgtcgggcggtgaaa 30109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6235672 - 6235587
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat 86  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||    
T  6235672 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat 6235587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13392896 - 13393057
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||          ||    ||| |||| |    
T  13392896 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgt----------atacaatttaggttgg 13392985  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
     | |||| ||||||| | |||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  13392986 atgtaatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgcccctg 13393057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13396035 - 13396196
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||          ||    ||| |||| |    
T  13396035 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgt----------atacaatttaggttgg 13396124  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
     | |||| ||||||| | |||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  13396125 atgtaatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgcccctg 13396196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 48130087 - 48129978
Alignment:
Q  27 cctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcgatc 125  Q
    ||||||||||||||||| ||||||     ||||||||||||||||||||||| ||||||| ||||||||| || |||||||| |||||||||||||||||    
T  48130087 cctatttgcgtgtgagagttttca-----cccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatc 48129993  T
Q  126 gagcccgggcgaccg 140  Q
    |||||||| ||||||    
T  48129992 gagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1817869 - 1817752
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-tta 99  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| | | |||||   ||||||| ||     
T  1817869 atagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaatggacttttggattg 1817770  T
Q  100 ggtctaatgtgcaaaaat 117  Q
    | ||||||||||||||||    
T  1817769 gatctaatgtgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 49908782 - 49908840
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctgg 49908840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 5517494 - 5517551
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 5517551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 7769369 - 7769315
Alignment:
Q  111 caaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaacc 7769315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 6212029 - 6212085
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||    
T  6212029 attatcgatcgagctcgggcgaccgcccgaggtcgccggacggtgaaaccgcccctg 6212085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 45194276 - 45194164
Alignment:
Q  53 ttgcccaaatttttctttttgtaagtctgttaattagcttttggttag-gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
    ||||||||  |||| ||||||||||| |||||||   ||||||| | | || ||||||||||||||||| ||||||| |||||| | |||| |||||||     
T  45194276 ttgcccaatattttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcgt 45194177  T
Q  152 cgggcggtgaaac 164  Q
    |||||||||||||    
T  45194176 cgggcggtgaaac 45194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 17555032 - 17554978
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccc 170  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  17555032 attatcgatcgagcccgggcgaccacccggggtcgtcggacggtgaaaccgcccc 17554978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 27363446 - 27363340
Alignment:
Q  68 tttttgtaagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacca 166  Q
    ||||||||||| |||||||  |||||||| || || ||||| ||||||||   ||||||||||||||||||||||||| |||||||   |||| |||||     
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  167 cccctgg 173  Q
    |||||||    
T  27363346 cccctgg 27363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 50720476 - 50720526
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  50720476 aattattgattgagcccgggcgaccgcccgaggtcgccgggcggtgaaacc 50720526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 12680193 - 12680249
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||||||| ||||||    
T  12680193 attatcgatcgagcccgggccaccgcctggggttgctgggcggtgaaaccgcccctg 12680249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  60 aatttttctttttgtaagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcgatcga 127  Q
    ||||||| |||||| |||| ||||||||  ||||||| || ||| ||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 45183133 - 45182968
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  45183133 atagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 45183034  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45183033 ggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 45182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6930909 - 6931082
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| |||||| ||||     
T  6930909 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaattggcttttgggttg 6931008  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6931009 gatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccgggcggtgaaaccgcccctgg 6931082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33041105 - 33040934
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||  ||||||||||||||||||||| ||||||||||||||| ||||     
T  33041105 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaattagcttttgggttg 33041006  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  33041005 ggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgccgggcggtgaaaccgcccct 33040934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 11018230 - 11018392
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  ||    
T  11018230 gtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 11018329  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  11018330 ctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaacc 11018392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 45336025 - 45335856
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttagg 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||| |  |||||||| ||    
T  45336025 tagtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaatgactttttggttggg 45335926  T
Q  102 tctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||    
T  45335925 tctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgccgggcggtgaaaccgcccct 45335856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27935330 - 27935161
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||     
T  27935330 atagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgagcttttgggttg 27935231  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccaccc 169  Q
    ||| ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||    
T  27935230 ggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgccaggcggtgaaaccaccc 27935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 19565517 - 19565689
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggttag 100  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||||  |  |||||||| |    
T  19565517 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgg 19565616  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||||    
T  19565617 gtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgccgggcggtgaaaccgcccctgg 19565689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22968459 - 22968610
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  22968459 atagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggtta 22968558  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22968559 agtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 22968610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 6503587 - 6503749
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||| || ||||| |||||| ||||  ||    
T  6503587 gtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaattggcttttgggttgagt 6503686  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  6503687 ctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 6503749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 19390298 - 19390146
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||   ||||| ||||     
T  19390298 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatagacttttaggttg 19390199  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19390198 agtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgcc 19390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6269441 - 6269592
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  6269441 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 6269540  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  6269541 agtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgc 6269592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 34084137 - 34084289
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||  |  ||||||||     
T  34084137 atagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 34084236  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
      | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34084237 aatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgcc 34084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39771942 - 39771791
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | |||||||  |||||| ||||     
T  39771942 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 39771843  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39771842 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 39771791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 40081756 - 40081893
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    ||||||||||||| ||||| |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||      
T  40081756 atagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgagcttttggttga 40081854  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgacc 139  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  40081855 gtctaatgttcaaaaattatcgatcgagcccgggcgacc 40081893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 35514414 - 35514254
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||    || |||||||   ||||| ||||     
T  35514414 atagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttcttttt----gtgtgttaatggacttttgggttg 35514319  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    | |||| | ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  35514318 gatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgccgggcggtgaaac 35514254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 5135397 - 5135291
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaaaaattatcga 123  Q
    |||||||| |||||||||||||| ||||  | |||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| ||||||| |||||    
T  5135397 cctatttgtgtgtgagaattttcggattttgtccaaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T
Q  124 tcgagcc 130  Q
    |||||||    
T  5135297 tcgagcc 5135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 6891035 - 6890977
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgccgggcggtgaaaccgcccctgg 6890977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 5354758 - 5354697
Alignment:
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    ||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  5354758 ctaatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 5354697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 22922205 - 22922157
Alignment:
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  22922205 taatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgcc 22922157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 6e-69; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 28996882 - 28996710
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||     
T  28996882 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttaggttg 28996783  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  28996782 ggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 28996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18339258 - 18339106
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| | ||     
T  18339258 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattg 18339159  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18339158 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 29743434 - 29743262
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggttag 100  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||| | | |||||||| |    
T  29743434 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaatgaactttttggttgg 29743335  T
Q  101 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||| ||| |||||||||| |||||||    
T  29743334 gtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccgggatcgtcggacggtgaaaccgcccctgg 29743262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 398769 - 398618
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| ||| ||||||||     
T  398769 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 398670  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  398669 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 398618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 13837973 - 13837821
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||  |||||| ||||     
T  13837973 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgtgcttttgggttg 13837874  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||| ||||||||||||||||| |||| |||| ||||||||||||||    
T  13837873 agtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgcc 13837821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 34948773 - 34948925
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  34948773 atagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 34948872  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  34948873 agtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgcc 34948925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 33229351 - 33229487
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||| || |||| ||||| ||||| ||||||||||||||||||||||||||||||||| || | |||||||   ||||| ||||     
T  33229351 atagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaatggacttttgggttg 33229450  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcg 136  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  33229451 ggtctaatgtacaaaaatgatcgatcgagcccgggcg 33229487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 31028435 - 31028544
Alignment:
Q  57 ccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggg 155  Q
    ||||| ||| |||||||||| | ||||||| ||||||| |||| | ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  31028435 ccaaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgccggg 31028534  T
Q  156 cggtgaaacc 165  Q
    ||||||||||    
T  31028535 cggtgaaacc 31028544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 24697899 - 24697997
Alignment:
Q  68 tttttgtaagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    ||||||||||| |||||||  |||||||| || || |||||||| ||||||||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaacc 24697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 13647053 - 13646997
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgccgggtggtgaaaccgcccctg 13646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 34385519 - 34385575
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  34385519 attatcgatcgagccagggcaaccgcccggggtcgccgggcggtgaaaccgcccctg 34385575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 21149331 - 21149380
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaac 164  Q
    ||||||||||| |||||| ||||||||||| |||| ||||||||||||||    
T  21149331 aattatcgatcaagcccgagcgaccgcccgaggtcaccgggcggtgaaac 21149380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 2753387 - 2753337
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||| |||| ||||||||||||  |||||||||| ||||||||||    
T  2753387 aattatcgattgagctcgggcgaccgcctagggtcgccggacggtgaaacc 2753337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 6e-69; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45418735 - 45418563
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  45418735 atagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 45418636  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45418635 gatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 45418563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 44084618 - 44084789
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttgg-tta 99  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||     
T  44084618 atagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttggattg 44084717  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  44084718 ggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgccgggcggtgaaaccgcccct 44084789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8147504 - 8147331
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaatttt-cagattgcccaaatttttctttttgtaagtctgttaattagcttttg-gtt 98  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||| |||    
T  8147504 atagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgagtt 8147405  T
Q  99 aggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8147404 gggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 8147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 771147 - 770975
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggttaggtc 103  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||| ||||    
T  771147 tgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggctttttggttgggtc 771048  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccgg-----ggtcgccgggcggtgaaaccacccct 171  Q
    |||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||||| |||||    
T  771047 taatgtgcaaaagttatcgatcgagcccgggcgaccgcccgggatccggtcgccgggcggtgaaaccgcccct 770975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 42440138 - 42439986
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  42440138 atagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttt 42440039  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42440038 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 42439986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 41251649 - 41251798
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  41251649 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 41251748  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 149  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251749 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 41251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32127156 - 32127308
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||| ||||||||| | |    
T  32127156 atagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatgagcttttgggtcg 32127255  T
Q  101 -gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32127256 agtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 32127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 35962867 - 35962715
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| | ||||||| ||||||| ||||     
T  35962867 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataagcttttgggttg 35962768  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35962767 agtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgcc 35962715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6403819 - 6403970
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| | ||||||| | | ||||||||     
T  6403819 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttg 6403918  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6403919 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 6403970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 8059351 - 8059513
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||| |||||||| |||||| ||||   |    
T  8059351 gtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattggcttttgggttgact 8059450  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||| ||||| |||||| || ||||||||| ||||||||||||||    
T  8059451 ctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcgtcgggcggtgaaacc 8059513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12756852 - 12756986
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| ||||     
T  12756852 atagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttg 12756951  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccggg 134  Q
    ||||||||| |||||||||||||||||| ||||||    
T  12756952 ggtctaatgcgcaaaaattatcgatcgaacccggg 12756986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16405752 - 16405603
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||| | ||||||| ||||||| ||||     
T  16405752 atagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatgagcttttgggttg 16405653  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 149  Q
     |||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  16405652 agtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtc 16405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 17445056 - 17445206
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  17445056 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 17445155  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     |||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  17445156 agtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgcc 17445206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31581637 - 31581789
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| || |     
T  31581637 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggatg 31581736  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||    
T  31581737 agtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgcc 31581789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 18981766 - 18981622
Alignment:
Q  3 agtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttagg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| | | |||||   ||||| ||||  |    
T  18981766 agtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatggacttttgggttgag 18981667  T
Q  102 tctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 146  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  18981666 tctaatgtgcaaaaattatcaatcgagcccggacgaccgcccggg 18981622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 2958131 - 2958267
Alignment:
Q  16 aaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaaa 114  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| | |||||||  |||||| ||||  ||||||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgcc 2958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 26238071 - 26237937
Alignment:
Q  39 tgagaattttcagatt-gcccaaatttttctttttgtaagtctgttaattagcttttggttagg-tctaatgtgcaaaaattatcgatcgagcccgggcg 136  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||   ||||||||| |  |||||| ||||||||| ||||||||||||||||||    
T  26238071 tgagagttttcagatttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaat-atcgatcgagcccgggcg 26237973  T
Q  137 accgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||| || ||||||||||||    
T  26237972 accgcccggggtcgccgggctgtaaaaccacccctg 26237937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 4555250 - 4555397
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaaaaattatcga 123  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||  ||||||| |||| ||| | ||||||||||||||||||    
T  4555250 cctatttacgtgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T
Q  124 tcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    ||||| ||  ||||||||||| | ||||||||||||| |||||||||||    
T  4555350 tcgagtcc-agcgaccgcccgagatcgccgggcggtggaaccacccctg 4555397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2286014 - 2285887
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| |||| | |||||||  |  ||||||||     
T  2286014 atagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatagactttttggttg 2285915  T
Q  100 ggtctaatgtgcaaaaattatcgatcga 127  Q
    | | ||||||||||||||||||||||||    
T  2285914 gatttaatgtgcaaaaattatcgatcga 2285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 26162721 - 26162799
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat 86  Q
    ||||||||||||   ||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26162721 tgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaat 26162799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 34523270 - 34523219
Alignment:
Q  122 gatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  34523270 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgcccctgg 34523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 7072589 - 7072710
Alignment:
Q  27 cctatttgcgtgtgagaattttcaga--ttgcccaaatttttctttttgtaagtctgt--taattagcttttggttag-gtctaatgtgcaaaaattatc 121  Q
    ||||||| |||| |||||||||||||  ||| ||||  |||||||||| ||||| |||  ||||  |||||||| | | || ||||||  ||||||||||    
T  7072589 cctatttacgtgcgagaattttcagaatttgtccaatattttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatc 7072688  T
Q  122 gatcgagcccgggcgaccgccc 143  Q
    ||||||||||||||||||||||    
T  7072689 gatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 34906028 - 34905969
Alignment:
Q  74 taagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcgatcgagcccg 132  Q
    ||||| |||||||  |||||||| |||||  |||||||||||||||||||||||||||||    
T  34906028 taagtgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23402260 - 23402088
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  23402260 atagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 23402161  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23402160 ggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctg 23402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16788040 - 16788205
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||| ||||     
T  16788040 atagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 16788139  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  16788140 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggttgccgggcaatgaaacc 16788205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 34136843 - 34137014
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||  ||    
T  34136843 gtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgagt 34136942  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctggc 174  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||    
T  34136943 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaaccacccatggc 34137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 4404157 - 4403995
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggt 102  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||||  ||    
T  4404157 gtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaattggcttttgggttgagt 4404058  T
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  4404057 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgccggccagtgaaacc 4403995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 29728401 - 29728553
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||     
T  29728401 atagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 29728500  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  29728501 agtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgcc 29728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 36408703 - 36408531
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    |||||||| ||||||||||||  ||||||||| |||||| |||||||||| |||||| ||| |||||||||||||| | |||||||   ||||||| | |    
T  36408703 atagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaatggacttttgggttg 36408604  T
Q  101 g-tctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36408603 gatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgccgggcggtgaaaccacccctg 36408531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 9877372 - 9877242
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||    
T  9877372 atagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggtta 9877273  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcc 130  Q
    |||||||||||||||||||||| ||||||||    
T  9877272 ggtctaatgtgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 15838437 - 15838286
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaat-tagcttttggtta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||  |  ||||||||     
T  15838437 atagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttc-ttttgtaaatgtgttaatggactttttggttg 15838339  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     || |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  15838338 agtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgcc 15838286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39914666 - 39914516
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||| ||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||| ||||| ||| | ||||||| ||||||| ||||     
T  39914666 atagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaatgagctttttggttg 39914568  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39914567 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 39914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2729211 - 2729382
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagcttttggttag 100  Q
    ||||||||||||||||||||   |||||||||||||| ||||| |||||| |||||| |||  ||||||||| ||||| |||||||  |||||||| | |    
T  2729211 atagtgtgctaaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaatgggcttttggattg 2729310  T
Q  101 g-tctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    | | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  2729311 gatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgccgggcggtgaaaccgcccct 2729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3648809 - 3648947
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||| | |||||||  |||||| ||||     
T  3648809 atagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttg 3648908  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgac 138  Q
     |||||||||| |||||||||||||||||||||||||||    
T  3648909 agtctaatgtgaaaaaattatcgatcgagcccgggcgac 3648947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 3435397 - 3435285
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaattagcttttgg-ttaggtctaatgtgcaaaaattatcga 123  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||  | |||||| || ||||||||||||||||||||||||    
T  3435397 cctatttgcgtttgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T
Q  124 tcgagcccgggcg 136  Q
    || ||||||||||    
T  3435297 tcaagcccgggcg 3435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42231089 - 42231012
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagt 78  Q
    |||||||||||||||||||||  |||||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  42231089 atagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaagt 42231012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 10397158 - 10397223
Alignment:
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacc 168  Q
    |||||||| | ||||||||||| ||||||||||||  |||||| |||||||||||||| |||||||    
T  10397158 ctaatgtgaagaaattatcgattgagcccgggcgagtgcccggagtcgccgggcggtgtaaccacc 10397223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  60 aatttttctttttgtaagtctgttaattagcttttggttagg-tctaatgtgcaaaaattatcgatcgagc 129  Q
    ||||||| ||||| ||||| |||||||   |||||| || || ||||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 35907700 - 35907539
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |  ||||| |||||| |||| ||||    
T  35907700 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaattggcttttgggttgggtc 35907601  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  35907600 taatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgccgggcggtgaaacc 35907539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 17445461 - 17445293
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||| | ||    
T  17445461 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttggatc 17445362  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||| |||||||||| |||| |||||||||||||||  |||||||||||||  ||||||| ||||||    
T  17445361 taatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgccgggcaatgaaaccgcccctg 17445293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26144407 - 26144256
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| ||| ||||||||     
T  26144407 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 26144308  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26144307 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 26144256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32982071 - 32982223
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| | |||||||  |||||| ||||     
T  32982071 atagagtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaatgggcttttaggttg 32982170  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32982171 ggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgcc 32982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 3829135 - 3828971
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||     
T  3829135 atagtgtgctaaataaaattcca-gacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttgggttg 3829037  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    ||| |||||||||||||||||||||||| |||| ||||||| ||||||| |||||| | |||||||    
T  3829036 ggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggttgccgggtgatgaaacc 3828971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7433597 - 7433449
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||| |||||||||||||| | |||||||  |||||| ||||     
T  7433597 atagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttg 7433498  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 148  Q
     |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  7433497 agtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggt 7433449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 42310964 - 42311108
Alignment:
Q  9 ctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaat 107  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||   |||||| ||||  |||||||    
T  42310964 ctaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaacgggcttttgggttgagtctaat 42311063  T
Q  108 gtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    |||||||||||||||||||||||||||||| || | |||||||||    
T  42311064 gtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgcc 42311108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 321396 - 321557
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtc 103  Q
    |||| ||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||   ||||| |||| | ||    
T  321396 tgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaatggacttttgggttggatc 321495  T
Q  104 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaacc 165  Q
    |||||  ||||||||||||||||||||||| ||||||||||   |||||||| |||||||||    
T  321496 taatgcacaaaaattatcgatcgagcccggacgaccgcccgaaatcgccgggtggtgaaacc 321557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 41972314 - 41972462
Alignment:
Q  27 cctatttgcgtgtgagaattttcagattgc--ccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaaaaattatcga 123  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||| |||||||  |||||| |||| | ||||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  124 tcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
    ||||| || ||||||||||||||||||| || ||||| |||| |||||||    
T  41972414 tcgag-ccaggcgaccgcccggggtcgctggacggtggaaccgcccctgg 41972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 33489815 - 33489666
Alignment:
Q  27 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtctgttaattagcttttggttag-gtctaatgtgcaaaaattatcga 123  Q
    ||||||||||||||||||||||||||||  || |||||||||||||| |||||| |||||||  |||||| ||| | ||||||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  124 tcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctgg 173  Q
     | | ||||  |||||| |||||||||||||| ||||||||| |||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgccgggtggtgaaaccgcccctgg 33489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 31867014 - 31866958
Alignment:
Q  115 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccct 171  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  31867014 aattatcggtcgaacccgggcgaccgcccggggtcgccgggcggtgaaaccgcccct 31866958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 23313345 - 23313246
Alignment:
Q  47 ttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggttaggtctaatgtgcaa-aaattatcgatcgagcccgggcgaccgcccg 144  Q
    |||||||||||||||||||||||||||||| | ||||||| | |||||  |||  ||||||||||||| |||| ||| ||||||||||||| ||||||||    
T  23313345 ttcagattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccg 23313246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 44352614 - 44352670
Alignment:
Q  116 attatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgccggatggtgaaaccgcccctg 44352670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 48901223 - 48901291
Alignment:
Q  103 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||||||| |||||||||||||| ||| ||| ||||||||| || ||||||||||| |||| ||||||    
T  48901223 ctaatgtgcataaattatcgatcga-ccccggccaccgcccggagttgccgggcggtggaaccgcccctg 48901291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5382 - 5230
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| | ||     
T  5382 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattg 5283  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5282 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 31632 - 31460
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    ||||||||| |||||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||  |||||| ||||     
T  31632 atagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaatgggcttttgggttg 31533  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccctg 172  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||    
T  31532 ggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgccgggcgatgaaaccgcccctg 31460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 480472 - 480623
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| ||| ||||||||     
T  480472 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 480571  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  480572 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 480623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 674 - 523
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagc-ttttggtta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| ||| ||||||||     
T  674 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 575  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 151  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  574 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 53077 - 52944
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||| |||||    
T  53077 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggtta 52978  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgg 133  Q
      ||||||||||||||||||||||||||||||||    
T  52977 aatctaatgtgcaaaaattatcgatcgagcccgg 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17994 - 17842
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtctgttaattagctttt-ggtta 99  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||     
T  17994 atagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 17895  T
Q  100 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 152  Q
     ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  17894 agtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgcc 17842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 1307 - 1259
Alignment:
Q  122 gatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccacccc 170  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  1307 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgcccc 1259  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 194058 - 194021
Alignment:
Q  122 gatcgagcccgggcgaccgcccggggtcgccgggcggt 159  Q
    ||||||||||||||||||||||||||||||||||||||    
T  194058 gatcgagcccgggcgaccgcccggggtcgccgggcggt 194021  T

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