View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13221_low_18 (Length: 226)
Name: NF13221_low_18
Description: NF13221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13221_low_18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 55 - 226
Target Start/End: Original strand, 13211868 - 13212039
Alignment:
| Q |
55 |
cacatgctaccttctgctgcttcatttggaagcaactaagaacatttttagctgaacaagaaaattaatttaactgttttggatgcaatatcataaaatt |
154 |
Q |
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| T |
13211868 |
cacatgctaccttctgctgcttcatttggaagcaactaagaacatttttagctgaacaagaaaattaatttaactgttttggatgcaatatcataaaatt |
13211967 |
T |
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| Q |
155 |
caaaccccacaaaaaattcatgaatttatacatccttctttcaattcaacatcatcaagtagtcaacttaat |
226 |
Q |
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| T |
13211968 |
caaaccccacaaaaaattcatgaatttatacatccttctttcaattcaacatcatcaagtagtcaacttaat |
13212039 |
T |
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