View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13222_high_16 (Length: 264)

Name: NF13222_high_16
Description: NF13222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13222_high_16
NF13222_high_16
[»] chr2 (55 HSPs)
chr2 (109-247)||(20365174-20365312)
chr2 (109-247)||(20623185-20623323)
chr2 (109-247)||(25495433-25495568)
chr2 (161-243)||(11622707-11622789)
chr2 (161-243)||(21850785-21850867)
chr2 (161-243)||(21859220-21859302)
chr2 (161-243)||(34707634-34707716)
chr2 (161-243)||(3755543-3755625)
chr2 (161-243)||(3765595-3765677)
chr2 (161-243)||(10681986-10682068)
chr2 (161-243)||(15600246-15600328)
chr2 (161-243)||(16274304-16274386)
chr2 (161-243)||(16283463-16283545)
chr2 (161-243)||(25263319-25263401)
chr2 (161-243)||(29854859-29854941)
chr2 (161-243)||(33307216-33307298)
chr2 (161-243)||(42385634-42385716)
chr2 (161-243)||(42400518-42400600)
chr2 (161-243)||(31355373-31355455)
chr2 (161-243)||(34685214-34685296)
chr2 (161-243)||(42245104-42245186)
chr2 (11-61)||(44374491-44374541)
chr2 (11-61)||(44374821-44374871)
chr2 (11-61)||(44390402-44390452)
chr2 (183-243)||(21150970-21151030)
chr2 (183-243)||(22186866-22186926)
chr2 (183-243)||(28480878-28480938)
chr2 (183-243)||(42248138-42248198)
chr2 (183-243)||(34069328-34069388)
chr2 (11-61)||(6856497-6856547)
chr2 (11-61)||(17685478-17685528)
chr2 (11-61)||(26718038-26718088)
chr2 (11-61)||(26732171-26732221)
chr2 (16-61)||(15943537-15943582)
chr2 (16-61)||(15952048-15952093)
chr2 (11-61)||(34528389-34528441)
chr2 (11-61)||(34542363-34542415)
chr2 (16-61)||(35139639-35139684)
chr2 (16-61)||(35147980-35148025)
chr2 (16-61)||(41232862-41232907)
chr2 (16-61)||(42564924-42564969)
chr2 (16-61)||(42573548-42573593)
chr2 (11-61)||(20623370-20623421)
chr2 (11-61)||(35039723-35039773)
chr2 (196-243)||(2652561-2652608)
chr2 (196-243)||(27681610-27681657)
chr2 (196-243)||(34436619-34436666)
chr2 (11-61)||(17069407-17069457)
chr2 (11-61)||(17075400-17075450)
chr2 (11-61)||(17095950-17096000)
chr2 (11-61)||(24286643-24286695)
chr2 (11-61)||(24293211-24293263)
chr2 (12-61)||(25495618-25495669)
chr2 (11-61)||(20920490-20920538)
chr2 (11-61)||(20365071-20365125)
[»] chr6 (49 HSPs)
chr6 (109-247)||(20531140-20531279)
chr6 (109-247)||(5487558-5487696)
chr6 (109-247)||(5996242-5996380)
chr6 (109-247)||(15389858-15389984)
chr6 (161-243)||(27047709-27047791)
chr6 (161-243)||(27057953-27058035)
chr6 (161-243)||(28303840-28303922)
chr6 (161-243)||(30995987-30996069)
chr6 (161-243)||(16635028-16635110)
chr6 (161-243)||(16644987-16645069)
chr6 (161-243)||(18111549-18111631)
chr6 (161-243)||(18126094-18126176)
chr6 (161-243)||(21359029-21359111)
chr6 (161-243)||(23963011-23963093)
chr6 (161-243)||(28266127-28266209)
chr6 (161-243)||(28344876-28344958)
chr6 (183-247)||(33299739-33299803)
chr6 (156-243)||(8721759-8721846)
chr6 (156-247)||(25692603-25692694)
chr6 (156-247)||(25699244-25699335)
chr6 (156-247)||(25713351-25713442)
chr6 (11-61)||(15389758-15389808)
chr6 (161-243)||(18205599-18205681)
chr6 (161-243)||(18220598-18220680)
chr6 (158-243)||(23983117-23983202)
chr6 (11-61)||(23927362-23927412)
chr6 (165-237)||(16089372-16089444)
chr6 (11-61)||(19826917-19826967)
chr6 (11-61)||(25993351-25993401)
chr6 (11-61)||(27537189-27537239)
chr6 (11-61)||(27551398-27551448)
chr6 (16-61)||(25552185-25552230)
chr6 (16-61)||(35090685-35090730)
chr6 (183-247)||(14475187-14475251)
chr6 (11-61)||(5487461-5487512)
chr6 (156-243)||(25653652-25653739)
chr6 (11-61)||(25692782-25692833)
chr6 (11-61)||(25699423-25699474)
chr6 (11-61)||(25713517-25713568)
chr6 (11-61)||(33299894-33299947)
chr6 (11-61)||(5996428-5996480)
chr6 (183-243)||(24920116-24920176)
chr6 (196-243)||(8728853-8728900)
chr6 (11-61)||(14475356-14475409)
chr6 (196-243)||(16303462-16303509)
chr6 (11-61)||(30823520-30823571)
chr6 (11-61)||(20531038-20531092)
chr6 (11-55)||(13827540-13827583)
chr6 (196-243)||(21709018-21709065)
[»] chr1 (31 HSPs)
chr1 (109-247)||(28991751-28991891)
chr1 (156-245)||(13451666-13451755)
chr1 (161-243)||(3351186-3351268)
chr1 (161-243)||(12464719-12464801)
chr1 (161-243)||(31553022-31553104)
chr1 (161-243)||(31562156-31562238)
chr1 (161-243)||(38124083-38124165)
chr1 (156-243)||(18702123-18702210)
chr1 (156-243)||(34337223-34337310)
chr1 (183-247)||(13804546-13804610)
chr1 (182-243)||(18751140-18751201)
chr1 (11-60)||(32135649-32135698)
chr1 (11-61)||(13804393-13804443)
chr1 (183-243)||(22479292-22479352)
chr1 (184-243)||(21497573-21497632)
chr1 (8-61)||(13451843-13451899)
chr1 (16-61)||(31540971-31541016)
chr1 (16-61)||(31549540-31549585)
chr1 (11-55)||(41745040-41745083)
chr1 (22-61)||(2384983-2385022)
chr1 (11-61)||(3431943-3431994)
chr1 (196-243)||(13464366-13464413)
chr1 (196-243)||(20501808-20501855)
chr1 (22-61)||(43455851-43455890)
chr1 (11-61)||(23355958-23356008)
chr1 (196-237)||(22472247-22472288)
chr1 (11-55)||(28459601-28459644)
chr1 (196-243)||(16134795-16134842)
chr1 (26-61)||(28991667-28991702)
chr1 (11-61)||(11950132-11950181)
chr1 (161-211)||(22479336-22479386)
[»] chr8 (30 HSPs)
chr8 (109-247)||(17528660-17528798)
chr8 (156-243)||(16191045-16191132)
chr8 (155-243)||(17128922-17129010)
chr8 (161-243)||(14204152-14204234)
chr8 (161-243)||(14218793-14218875)
chr8 (161-243)||(36577209-36577291)
chr8 (161-231)||(31001271-31001341)
chr8 (156-243)||(31208155-31208242)
chr8 (165-243)||(16200138-16200216)
chr8 (11-59)||(25585390-25585438)
chr8 (156-243)||(36248373-36248460)
chr8 (11-61)||(17662809-17662859)
chr8 (11-61)||(17681938-17681988)
chr8 (183-243)||(36252959-36253019)
chr8 (184-247)||(16760442-16760504)
chr8 (184-247)||(16774879-16774941)
chr8 (11-61)||(23923398-23923449)
chr8 (16-61)||(30939300-30939345)
chr8 (16-61)||(39836558-39836603)
chr8 (16-61)||(39844600-39844645)
chr8 (183-231)||(25718710-25718758)
chr8 (183-243)||(4583417-4583477)
chr8 (11-61)||(16760609-16760662)
chr8 (11-61)||(16775046-16775099)
chr8 (22-61)||(17528844-17528883)
chr8 (196-243)||(23092381-23092428)
chr8 (22-60)||(26871782-26871820)
chr8 (196-237)||(6583317-6583358)
chr8 (196-243)||(19850443-19850490)
chr8 (196-243)||(19856479-19856526)
[»] scaffold1904 (1 HSPs)
scaffold1904 (163-245)||(1171-1253)
[»] chr3 (64 HSPs)
chr3 (109-247)||(18950081-18950207)
chr3 (109-200)||(27551289-27551381)
chr3 (161-243)||(1004773-1004855)
chr3 (161-243)||(6563415-6563497)
chr3 (161-243)||(6577084-6577166)
chr3 (161-243)||(10721362-10721444)
chr3 (125-206)||(17934893-17934971)
chr3 (161-243)||(22951507-22951589)
chr3 (161-243)||(22965481-22965563)
chr3 (161-243)||(25264416-25264498)
chr3 (161-243)||(25273910-25273992)
chr3 (139-247)||(18954057-18954153)
chr3 (161-243)||(11918862-11918944)
chr3 (161-243)||(11933432-11933514)
chr3 (161-243)||(17563350-17563432)
chr3 (161-243)||(17617147-17617229)
chr3 (156-243)||(7064284-7064371)
chr3 (156-243)||(7097129-7097216)
chr3 (156-243)||(13274541-13274628)
chr3 (156-243)||(16290508-16290595)
chr3 (156-243)||(27978413-27978500)
chr3 (156-243)||(30101702-30101789)
chr3 (161-243)||(5144922-5145004)
chr3 (161-243)||(6294167-6294249)
chr3 (11-61)||(9184122-9184172)
chr3 (161-243)||(15684255-15684337)
chr3 (11-61)||(50826326-50826376)
chr3 (183-243)||(31278314-31278374)
chr3 (156-231)||(4504011-4504086)
chr3 (161-243)||(15675713-15675795)
chr3 (11-61)||(16814920-16814971)
chr3 (125-206)||(16815034-16815113)
chr3 (11-61)||(39706815-39706865)
chr3 (190-247)||(15694216-15694273)
chr3 (190-247)||(15696530-15696587)
chr3 (190-247)||(15710820-15710877)
chr3 (16-61)||(41007579-41007624)
chr3 (16-61)||(41016358-41016403)
chr3 (11-61)||(50849482-50849534)
chr3 (183-243)||(9184267-9184327)
chr3 (22-61)||(17935033-17935072)
chr3 (23-61)||(27339405-27339443)
chr3 (11-61)||(27958320-27958369)
chr3 (159-200)||(27884419-27884460)
chr3 (11-55)||(4435399-4435442)
chr3 (11-55)||(4456190-4456233)
chr3 (12-61)||(18949982-18950033)
chr3 (11-55)||(30063170-30063213)
chr3 (196-243)||(1479713-1479760)
chr3 (11-61)||(3711566-3711619)
chr3 (11-61)||(8153669-8153720)
chr3 (22-61)||(13507797-13507836)
chr3 (196-243)||(18350881-18350928)
chr3 (196-243)||(24216658-24216705)
chr3 (11-61)||(51922600-51922653)
chr3 (11-60)||(17360040-17360092)
chr3 (11-60)||(17364682-17364734)
chr3 (11-61)||(18040864-18040914)
chr3 (28-61)||(2256393-2256426)
chr3 (11-55)||(14536954-14536997)
chr3 (196-243)||(2215598-2215645)
chr3 (11-61)||(8196757-8196810)
chr3 (11-61)||(8223225-8223278)
chr3 (26-61)||(27551205-27551240)
[»] scaffold0545 (2 HSPs)
scaffold0545 (109-200)||(8335-8427)
scaffold0545 (26-61)||(8251-8286)
[»] chr5 (42 HSPs)
chr5 (161-243)||(21986830-21986912)
chr5 (161-243)||(21995478-21995560)
chr5 (161-243)||(26079016-26079098)
chr5 (161-243)||(26088995-26089077)
chr5 (161-243)||(26176684-26176766)
chr5 (161-243)||(27063683-27063765)
chr5 (161-243)||(3477423-3477505)
chr5 (161-243)||(3492193-3492275)
chr5 (161-243)||(27220804-27220886)
chr5 (161-243)||(27223809-27223891)
chr5 (161-243)||(27233280-27233362)
chr5 (161-243)||(33835801-33835883)
chr5 (161-243)||(33844497-33844579)
chr5 (155-243)||(31548698-31548786)
chr5 (156-243)||(21851292-21851379)
chr5 (161-243)||(12170749-12170831)
chr5 (161-243)||(12180178-12180260)
chr5 (161-243)||(20377365-20377447)
chr5 (161-243)||(20386154-20386236)
chr5 (161-243)||(23038756-23038838)
chr5 (165-243)||(23636940-23637018)
chr5 (165-243)||(23828414-23828492)
chr5 (165-243)||(23835872-23835950)
chr5 (161-243)||(36458237-36458319)
chr5 (161-243)||(11803010-11803093)
chr5 (161-243)||(11813086-11813169)
chr5 (156-243)||(23984402-23984489)
chr5 (183-243)||(41094219-41094279)
chr5 (11-60)||(19225643-19225692)
chr5 (11-61)||(20371083-20371133)
chr5 (11-61)||(20396786-20396836)
chr5 (11-61)||(43597049-43597099)
chr5 (11-61)||(43629843-43629893)
chr5 (16-61)||(24955840-24955885)
chr5 (16-61)||(24964300-24964345)
chr5 (16-61)||(28844959-28845004)
chr5 (16-61)||(28853569-28853614)
chr5 (11-61)||(21931237-21931288)
chr5 (11-61)||(31412626-31412677)
chr5 (11-61)||(1727160-1727211)
chr5 (196-243)||(17642095-17642142)
chr5 (196-243)||(23026157-23026204)
[»] scaffold1481 (1 HSPs)
scaffold1481 (161-243)||(1117-1199)
[»] scaffold0429 (1 HSPs)
scaffold0429 (161-243)||(14488-14570)
[»] scaffold0015 (2 HSPs)
scaffold0015 (161-243)||(194379-194461)
scaffold0015 (28-61)||(188339-188372)
[»] chr7 (43 HSPs)
chr7 (161-243)||(2548564-2548646)
chr7 (161-243)||(2562450-2562532)
chr7 (161-243)||(16890211-16890293)
chr7 (161-243)||(27966419-27966501)
chr7 (161-243)||(27975872-27975954)
chr7 (156-243)||(16545075-16545162)
chr7 (156-243)||(16620500-16620587)
chr7 (161-243)||(5199630-5199712)
chr7 (161-243)||(5208759-5208841)
chr7 (161-243)||(15185162-15185244)
chr7 (161-243)||(15199782-15199864)
chr7 (161-242)||(27434869-27434950)
chr7 (161-242)||(27443899-27443980)
chr7 (161-243)||(558919-559002)
chr7 (161-243)||(568829-568912)
chr7 (156-243)||(29023037-29023124)
chr7 (156-243)||(29031475-29031562)
chr7 (161-243)||(16121146-16121228)
chr7 (161-243)||(16147885-16147967)
chr7 (156-243)||(16244297-16244384)
chr7 (125-200)||(4323447-4323518)
chr7 (11-61)||(4662229-4662280)
chr7 (156-243)||(16227419-16227506)
chr7 (11-61)||(1887267-1887317)
chr7 (11-61)||(1901368-1901418)
chr7 (11-61)||(18303403-18303453)
chr7 (11-61)||(24186465-24186515)
chr7 (11-61)||(10441984-10442036)
chr7 (16-61)||(13832523-13832568)
chr7 (16-61)||(13840553-13840598)
chr7 (11-61)||(17739729-17739779)
chr7 (151-243)||(16910283-16910372)
chr7 (196-243)||(17210914-17210961)
chr7 (196-243)||(17514830-17514877)
chr7 (196-243)||(17538337-17538384)
chr7 (196-243)||(29081604-29081651)
chr7 (196-243)||(29096363-29096410)
chr7 (196-243)||(40679592-40679639)
chr7 (196-243)||(44075700-44075747)
chr7 (151-243)||(36477207-36477296)
chr7 (11-61)||(4323572-4323623)
chr7 (11-61)||(33533701-33533752)
chr7 (11-61)||(43600360-43600411)
[»] chr4 (33 HSPs)
chr4 (161-243)||(10786280-10786362)
chr4 (156-243)||(21399474-21399561)
chr4 (156-243)||(24924243-24924330)
chr4 (161-243)||(4748064-4748146)
chr4 (156-243)||(14719151-14719238)
chr4 (156-243)||(14737393-14737480)
chr4 (156-243)||(18009716-18009803)
chr4 (156-243)||(19645517-19645604)
chr4 (156-243)||(25247764-25247851)
chr4 (161-243)||(19759447-19759529)
chr4 (161-243)||(19774203-19774285)
chr4 (186-247)||(21530811-21530872)
chr4 (183-247)||(20866317-20866381)
chr4 (11-61)||(772965-773015)
chr4 (11-61)||(20866163-20866213)
chr4 (202-247)||(52297525-52297570)
chr4 (184-247)||(1876044-1876106)
chr4 (184-247)||(1890159-1890221)
chr4 (11-61)||(27342050-27342100)
chr4 (196-247)||(772811-772862)
chr4 (11-61)||(1875886-1875939)
chr4 (11-61)||(1890001-1890054)
chr4 (11-61)||(8093275-8093326)
chr4 (11-61)||(8102080-8102131)
chr4 (22-61)||(10640159-10640198)
chr4 (196-243)||(34842377-34842424)
chr4 (26-61)||(21530668-21530703)
chr4 (196-243)||(26211062-26211109)
chr4 (196-243)||(26219822-26219869)
chr4 (196-243)||(55586260-55586307)
chr4 (162-200)||(10640043-10640081)
chr4 (11-61)||(12425756-12425808)
chr4 (11-61)||(12998343-12998397)
[»] scaffold1547 (1 HSPs)
scaffold1547 (161-243)||(1240-1322)
[»] scaffold0144 (2 HSPs)
scaffold0144 (161-243)||(603-685)
scaffold0144 (161-243)||(12089-12171)
[»] scaffold1120 (2 HSPs)
scaffold1120 (156-244)||(1088-1176)
scaffold1120 (11-61)||(1265-1314)
[»] scaffold0871 (1 HSPs)
scaffold0871 (156-243)||(1410-1497)
[»] scaffold0703 (1 HSPs)
scaffold0703 (156-243)||(6035-6122)
[»] scaffold0047 (1 HSPs)
scaffold0047 (156-243)||(83048-83135)
[»] scaffold0043 (1 HSPs)
scaffold0043 (183-243)||(62870-62930)
[»] scaffold0001 (1 HSPs)
scaffold0001 (183-243)||(47119-47179)
[»] scaffold0497 (2 HSPs)
scaffold0497 (11-61)||(12501-12552)
scaffold0497 (162-200)||(12387-12425)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-61)||(25394-25444)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-61)||(122963-123012)
[»] scaffold0077 (1 HSPs)
scaffold0077 (186-243)||(32076-32133)
[»] scaffold0455 (1 HSPs)
scaffold0455 (196-243)||(4254-4301)
[»] scaffold0091 (1 HSPs)
scaffold0091 (22-61)||(19572-19611)
[»] scaffold0039 (2 HSPs)
scaffold0039 (22-61)||(38983-39022)
scaffold0039 (162-200)||(39100-39138)
[»] scaffold0046 (1 HSPs)
scaffold0046 (196-237)||(37588-37629)
[»] scaffold0278 (1 HSPs)
scaffold0278 (11-61)||(10194-10243)
[»] scaffold0431 (1 HSPs)
scaffold0431 (11-61)||(4167-4219)


Alignment Details
Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 20365174 - 20365312
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20365174 ctaaactaaacgggatactagcgtaatggcgtaaaacaataaaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtcggtgcttg 20365273  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20365274 tgttacctacattattacatcaactcctagatacattct 20365312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 20623323 - 20623185
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20623323 ctaaactaaacggtatactagcgtaacggcgtaaaacaataaaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtcggtgcttg 20623224  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20623223 tgttacctacattattacatcaactcctagatacattct 20623185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 25495568 - 25495433
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    ||||||||||||  | ||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  25495568 ctaaactaaacggtaaactagcgtaacggcgtaaaa--ata-aaataagcgtaaagcgataaataaagtgggatagtgtcggtgcatatgtcggtgcttg 25495472  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25495471 tgttacctacattattacatcaattcctagatacattct 25495433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11622707 - 11622789
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  11622707 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 11622789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 21850785 - 21850867
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  21850785 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagataca 21850867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 21859220 - 21859302
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  21859220 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagataca 21859302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 34707716 - 34707634
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  34707716 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagataca 34707634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 3755543 - 3755625
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  3755543 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 3755625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 3765595 - 3765677
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  3765595 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 3765677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 10681986 - 10682068
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  10681986 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 10682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 15600328 - 15600246
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  15600328 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 15600246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 16274386 - 16274304
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16274386 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16274304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 16283545 - 16283463
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16283545 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16283463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 25263401 - 25263319
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  25263401 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 25263319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 29854941 - 29854859
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  29854941 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 29854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 33307216 - 33307298
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  33307216 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 33307298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 42385716 - 42385634
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  42385716 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 42385634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 42400600 - 42400518
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  42400600 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 42400518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 31355373 - 31355455
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  31355373 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 31355455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 34685296 - 34685214
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  34685296 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 34685214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 42245186 - 42245104
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  | ||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  42245186 aaagcggtaaataaatcgtgatggtgtcggtgcgtgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 42245104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 44374541 - 44374491
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44374541 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 44374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 44374871 - 44374821
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44374871 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 44374821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 44390452 - 44390402
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44390452 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 44390402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21151030 - 21150970
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  21151030 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 21150970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 22186926 - 22186866
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  22186926 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 22186866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 28480938 - 28480878
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  28480938 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 28480878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 42248138 - 42248198
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  42248138 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 42248198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 34069328 - 34069388
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  34069328 agtgtcagtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 34069388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 6856497 - 6856547
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  6856497 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 6856547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17685478 - 17685528
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  17685478 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 17685528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 26718038 - 26718088
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  26718038 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 26718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 26732171 - 26732221
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  26732171 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 26732221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 15943537 - 15943582
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15943537 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 15943582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 15952048 - 15952093
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15952048 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 15952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 34528389 - 34528441
Alignment:
Q  11 aaaataaaaggaaaa--acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  34528389 aaaataaaaggaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 34528441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 34542363 - 34542415
Alignment:
Q  11 aaaataaaaggaaaa--acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  34542363 aaaataaaaggaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 34542415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 35139684 - 35139639
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  35139684 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 35139639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 35148025 - 35147980
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  35148025 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 35147980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 41232862 - 41232907
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41232862 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 41232907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 42564924 - 42564969
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42564924 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 42564969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 42573548 - 42573593
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42573548 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 42573593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 20623421 - 20623370
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  20623421 aaaataaaaggaaaaaacacttgggttacaagccaaggtttattaagaaaat 20623370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 35039773 - 35039723
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||||||||    
T  35039773 aaaataaaaaggaaaacacttgggttacaaatcaaggtttattaagaaaat 35039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 2652608 - 2652561
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  2652608 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 2652561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 27681610 - 27681657
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27681610 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27681657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 34436666 - 34436619
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  34436666 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 34436619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17069407 - 17069457
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||||||||    
T  17069407 aaaataaaaggaaaaacacttgggttaaactcgaaggtttattaagaaaat 17069457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17075400 - 17075450
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||||||||    
T  17075400 aaaataaaaggaaaaacacttgggttaaactcgaaggtttattaagaaaat 17075450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17095950 - 17096000
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||| |||||||| || | ||||||||||||||||||    
T  17095950 aaaataaaaggaaaaacatttgggttaaaatcgaaggtttattaagaaaat 17096000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 24286695 - 24286643
Alignment:
Q  11 aaaataaaaggaaaaac--acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||||||||||    
T  24286695 aaaataaaaggaaaaagcaacttgggttacaaaccaagttttattaagaaaat 24286643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 24293263 - 24293211
Alignment:
Q  11 aaaataaaaggaaaaac--acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||||||||||    
T  24293263 aaaataaaaggaaaaagcaacttgggttacaaaccaagttttattaagaaaat 24293211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 25495669 - 25495618
Alignment:
Q  12 aaataaaaggaaaaa--cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||  |||||||||||||| |||||||||||||| |||||    
T  25495669 aaataaaaggaaaaaaacacttgggttacaagccaaggtttattaaaaaaat 25495618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 20920538 - 20920490
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||   | ||||||||||||||||||||||||    
T  20920538 aaaataaaaggaaaaacacttgc--tgcaaaccaaggtttattaagaaaat 20920490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20365071 - 20365125
Alignment:
Q  11 aaaataaaaggaaaaa----cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||    |||||||||||| | ||||||||||||||||||||    
T  20365071 aaaataaaaggaaaaagggacacttgggttaccagccaaggtttattaagaaaat 20365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 20531140 - 20531279
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaa-taagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgctt 207  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20531140 ctaaactaaacggtatactagcgtaacggcgtaaaacaataaaaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtcggtgctt 20531239  T
Q  208 gtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20531240 gtgttacctacattattacatcaactcctagatacattct 20531279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 5487558 - 5487696
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  5487558 ctaaactaaagggtatactagcgtaacggcgtaaaacaataaaaacaagcataaaacggtaaataaagtgggatagtgtcggtgcatgtgtcggtgcttg 5487657  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5487658 tgttacctacattattacatcaactcctagatacattct 5487696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 5996380 - 5996242
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  5996380 ctaaactaaacagtatactagcgtaacggcgtaaaacaatagaaataagcgtaaagcgataaataaagtggggtagtgtcggtgcatgtgtcggtgcttg 5996281  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5996280 tgttacctacattattacatcaattcctagatacattct 5996242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 15389858 - 15389984
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||            ||||||||    
T  15389858 ctaaactaaacgggatactagcgtaacggcgtagaacaataaaaataagcgtaaagcggtaaataaagtgggataatgtc------------ggtgcttg 15389945  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  15389946 tgttacctacattattacatcaacccctaggtacattct 15389984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27047709 - 27047791
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27047709 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27047791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27057953 - 27058035
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27057953 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 28303922 - 28303840
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  28303922 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 28303840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 30995987 - 30996069
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  30995987 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 30996069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 16635110 - 16635028
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||| ||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16635110 aaagcggcaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16635028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 16645069 - 16644987
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||| ||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16645069 aaagcggcaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16644987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 18111631 - 18111549
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18111631 aaagcagtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18111549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 18126176 - 18126094
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18126176 aaagcagtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18126094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 21359029 - 21359111
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  21359029 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 21359111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 23963011 - 23963093
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23963011 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23963093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 28266209 - 28266127
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  28266209 aaagtggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 28266127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 28344958 - 28344876
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  28344958 aaagtggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 28344876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 33299803 - 33299739
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  33299803 agtgccggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagatacattct 33299739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 8721759 - 8721846
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  8721759 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 8721846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 25692694 - 25692603
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||| ||||| ||||||||| || | || |||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  25692694 agcggaaagcagtaaataaattgtggtattgtcggtgcaagtgtcggtgtttgtgttacctacattattacatcaattcctagatacattct 25692603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 25699335 - 25699244
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||| ||||| ||||||||| || | || |||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  25699335 agcggaaagcagtaaataaattgtggtattgtcggtgcaagtgtcggtgtttgtgttacctacattattacatcaattcctagatacattct 25699244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 25713442 - 25713351
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||| ||||| ||||||||| || | ||||||||||||| |||| |||| ||| |||||||||||||||||||||| |||||||||||||||    
T  25713442 agcggaaagcagtaaataaattgtggtagtgtcggtgcaagtgtcggtgtttgggttacctacattattacatcaattcctagatacattct 25713351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 15389758 - 15389808
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15389758 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 15389808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 18205599 - 18205681
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  | | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18205599 aaagcggtaaataaaacgtggtagtgtcggtgcacgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18205681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 18220598 - 18220680
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  | | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18220598 aaagcggtaaataaaacgtggtagtgtcggtgcacgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18220680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 23983117 - 23983202
Alignment:
Q  158 cgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||| |||||||| || | ||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||| |||||    
T  23983117 cgtaaagcgataaataaattgtggtagtgtcggtgcaagtgtcggtgcttatgttacctacattattacatcaattcctaaataca 23983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 23927412 - 23927362
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23927412 aaaataaaaagaaaaacacttgggttacaaaccaaggtttattaagaaaat 23927362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 16089444 - 16089372
Alignment:
Q  165 cggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactccta 237  Q
    |||||||||||  | ||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  16089444 cggtaaataaatcgtgatggtgtcggtgcgtgtgtcggtgcttgtgttacctacattattacatcaattccta 16089372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 19826917 - 19826967
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  19826917 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 19826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 25993401 - 25993351
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  25993401 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 25993351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 27537239 - 27537189
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27537239 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 27537189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 27551448 - 27551398
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27551448 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 27551398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 25552230 - 25552185
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  25552230 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 25552185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 35090685 - 35090730
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  35090685 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 35090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 14475251 - 14475187
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||| ||||  |||||||||||||||| |||||||||| || |||||||||||||||    
T  14475251 agtgtcggtgcaagtgtcagtgcttgtgttacctatattattacattaattcctagatacattct 14475187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 5487461 - 5487512
Alignment:
Q  11 aaaataaaaggaaaa-acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5487461 aaaataaaaggaaaaaacacttgggttacaagccaaggtttattaagaaaat 5487512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 25653739 - 25653652
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||| ||||||||| || | |||||| |||||| | || |||||||||||||| |||||||||||||||| ||||| |||||    
T  25653739 agcggaaagcagtaaataaattgaggtagtgttggtgcaagcgtcggtgcttgtgttacatacattattacatcaattcctaaataca 25653652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 25692833 - 25692782
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25692833 aaaataaaaggaaaaaacacttgggttacaaaccaagatttattaagaaaat 25692782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 25699474 - 25699423
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25699474 aaaataaaaggaaaaaacacttgggttacaaaccaagatttattaagaaaat 25699423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 25713568 - 25713517
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25713568 aaaataaaaggaaaaaacacttgggttacaaaccaagatttattaagaaaat 25713517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 33299947 - 33299894
Alignment:
Q  11 aaaataaaagga---aaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  33299947 aaaataaaaggaaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 33299894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 5996480 - 5996428
Alignment:
Q  11 aaaataaaaggaaaaa--cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  5996480 aaaataaaaggaaaaaagcacttgggttacaagccaaggtttattaagaaaat 5996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 24920176 - 24920116
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||| ||||||| |||||| |||||||||||||| ||||||||| ||||| |||||    
T  24920176 agtgtcggtccatgtgtcggtgctggtgttacctacattgttacatcaattcctaaataca 24920116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 8728853 - 8728900
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  8728853 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 8728900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 14475409 - 14475356
Alignment:
Q  11 aaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  14475409 aaaataaaaggaaaaaggacacttgggttacaagccaaggtttattaagaaaat 14475356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 16303462 - 16303509
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16303462 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16303509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 30823520 - 30823571
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  30823520 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 30823571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20531038 - 20531092
Alignment:
Q  11 aaaataaaaggaaaaa----cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||    |||||||||||||| ||||||||||||||||||||    
T  20531038 aaaataaaaggaaaaaaagacacttgggttacaagccaaggtttattaagaaaat 20531092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 13827583 - 13827540
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  13827583 aaaataaaaggaaag-cacttgggttacaaaccaaggtttattaa 13827540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 21709018 - 21709065
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||| ||||||||||||||||||||||||| ||||| |||||    
T  21709018 gtgtcggtgcctgtgttacctacattattacatcaattcctaaataca 21709065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 28991751 - 28991891
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaa--taagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgct 206  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28991751 ctaaactaaacggtatactagcgtaacggcgtaaaacaataaaaaaataagcgtaaagcggtaaataaagtgggatagtgtcagtgcatgtgtcggtgct 28991850  T
Q  207 tgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28991851 tgtgttacctacattattacatcaactcctagatacattct 28991891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 13451755 - 13451666
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacatt 245  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13451755 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctagatacatt 13451666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 3351186 - 3351268
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  3351186 aaagcggtaaataaaatgtggcagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 3351268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 12464719 - 12464801
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  12464719 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 12464801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 31553104 - 31553022
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  31553104 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 31553022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 31562238 - 31562156
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  31562238 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 31562156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 38124083 - 38124165
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  38124083 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 38124165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 18702210 - 18702123
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  18702210 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttatgttacctacattattacatcaactcctaaataca 18702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 34337223 - 34337310
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  34337223 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 34337310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 13804546 - 13804610
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13804546 agtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctagatacattct 13804610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 18751201 - 18751140
Alignment:
Q  182 tagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18751201 tagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18751140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 32135649 - 32135698
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32135649 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaa 32135698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 13804393 - 13804443
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13804393 aaaataaaaggaaaaacccttgggttacaaaccaaggtttattaagaaaat 13804443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 22479352 - 22479292
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  22479352 agtgtcggtgcttgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 22479292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 21497573 - 21497632
Alignment:
Q  184 gtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  21497573 gtgtcggtgcttgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 21497632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 13451899 - 13451843
Alignment:
Q  8 aataaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  13451899 aataaaataaaaggaaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 13451843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 31541016 - 31540971
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  31541016 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 31540971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 31549585 - 31549540
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  31549585 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 31549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 41745040 - 41745083
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  41745040 aaaataaaaggaaaa-cacttgggttacaaaccaaggtttattaa 41745083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 2385022 - 2384983
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  2385022 aaaaaaacttgggttacaaaccaaggtttattaagaaaat 2384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 3431943 - 3431994
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  3431943 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 3431994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 13464413 - 13464366
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  13464413 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 13464366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 20501855 - 20501808
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  20501855 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 20501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 43455890 - 43455851
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  43455890 aaaaacacttgggttaccaaccaaggtttattaagaaaat 43455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 23355958 - 23356008
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||||||||    
T  23355958 aaaataaaaaggaaaacacttggattacaaaccaaggtttatcaagaaaat 23356008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 22472288 - 22472247
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactccta 237  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  22472288 gtgtcggtgcttgtgttacctacattattacatcaattccta 22472247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 28459644 - 28459601
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  28459644 aaaataaaaggaaaa-cacttaggttacaaaccaaggtttattaa 28459601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 16134842 - 16134795
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||| ||||||||||||||||||||||||| ||||| |||||    
T  16134842 gtgtcggtgcatgtgttacctacattattacatcaattcctaaataca 16134795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 28991667 - 28991702
Alignment:
Q  26 acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28991667 acacttgggttacaagccaaggtttattaagaaaat 28991702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 11950181 - 11950132
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||||    
T  11950181 aaaataaaaggaaaa-cgcttatgttacaaaccaaggtttattaagaaaat 11950132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 22479386 - 22479336
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgt 211  Q
    ||||||||||||||| || | ||||||||||||| |||| |||||||||||    
T  22479386 aaagcggtaaataaaatgtggtagtgtcggtgcaagtgtcggtgcttgtgt 22479336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 17528798 - 17528660
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||| |||||||  || ||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  17528798 ctaagctaaacggtatgctagcataacggcgtaaaacaacaaaaataagcgtaaagcggtaaataaagtggggtagtgtcggtgcatgtgtcggtgcttg 17528699  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  17528698 tgttacctacattattacatcaattcctagatacattct 17528660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 16191045 - 16191132
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  16191045 agcggaaagcggtaaataaattgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 16191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 17129010 - 17128922
Alignment:
Q  155 aagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||| ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17129010 aagcggaaagcggtaaataaattgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17128922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 14204234 - 14204152
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  14204234 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 14204152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 14218875 - 14218793
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  14218875 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 14218793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 36577209 - 36577291
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  36577209 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 36577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 31001271 - 31001341
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaa 231  Q
    ||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31001271 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaa 31001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 31208155 - 31208242
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  31208155 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 31208242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 16200138 - 16200216
Alignment:
Q  165 cggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16200138 cggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16200216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 25585390 - 25585438
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaa 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25585390 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaa 25585438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 36248460 - 36248373
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| |||||||||||||||||||||||||  |||| ||||| |||||    
T  36248460 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattaggtcaattcctaaataca 36248373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17662809 - 17662859
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17662809 aaaataaaaggaaaaacacttgggttataaaccaaggtttattaagaaaat 17662859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17681938 - 17681988
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17681938 aaaataaaaggaaaaacacttgggttataaaccaaggtttattaagaaaat 17681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 36252959 - 36253019
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  36252959 agtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 36253019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 16760504 - 16760442
Alignment:
Q  184 gtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  16760504 gtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatc-attcctagatacattct 16760442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 16774941 - 16774879
Alignment:
Q  184 gtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  16774941 gtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatc-attcctagatacattct 16774879  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 23923398 - 23923449
Alignment:
Q  11 aaaataaaaggaaaa-acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23923398 aaaataaaaggaaaaaacacttgggttacaaaccaaggtttattaagaaaat 23923449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 30939345 - 30939300
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  30939345 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 30939300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 39836558 - 39836603
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  39836558 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 39836603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 39844600 - 39844645
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  39844600 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 39844645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 25718758 - 25718710
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaa 231  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  25718758 agtgtcggtgcatgtgtcggtgcttgtgttacttacattattacatcaa 25718710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 4583477 - 4583417
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||| |||| | ||||||| ||||||||||||||||||||||| ||||| |||||    
T  4583477 agtgtcggtgtatgtttcggtgcttatgttacctacattattacatcaattcctaaataca 4583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 16760662 - 16760609
Alignment:
Q  11 aaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  16760662 aaaataaaaggaaaaaggacacttgggttacaagccaaggtttattaagaaaat 16760609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 16775099 - 16775046
Alignment:
Q  11 aaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  16775099 aaaataaaaggaaaaaggacacttgggttacaagccaaggtttattaagaaaat 16775046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 17528883 - 17528844
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  17528883 aaaaacacttgggttacaagccaaggtttattaagaaaat 17528844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 23092428 - 23092381
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23092428 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23092381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 26871782 - 26871820
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaa 60  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  26871782 aaaaacacttgggttactaaccaaggtttattaagaaaa 26871820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 6583317 - 6583358
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactccta 237  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  6583317 gtgtcggtgcttgtgttacctacattattacatcaattccta 6583358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 19850490 - 19850443
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||||||| |||||||||||||||| ||||| |||||    
T  19850490 gtgtcggtgcttgtgttacgtacattattacatcaattcctaaataca 19850443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 19856526 - 19856479
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||||||| |||||||||||||||| ||||| |||||    
T  19856526 gtgtcggtgcttgtgttacgtacattattacatcaattcctaaataca 19856479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1904 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1904
Description:

Target: scaffold1904; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 1253 - 1171
Alignment:
Q  163 agcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacatt 245  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  1253 agcggtaaataaagtggggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagatacatt 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 18950081 - 18950207
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttg 208  Q
    |||||||||||   ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||            ||||||||    
T  18950081 ctaaactaaacagtatactagagtaacagcgtaaaacaatagaaataagcgtaaagcggtaaataaagtggggtagtgtc------------ggtgcttg 18950168  T
Q  209 tgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18950169 tgttacctacattattacatcaattcctagatacattct 18950207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 27551289 - 27551381
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaata-caaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  27551289 ctaaactaaacggtatactagcgtaacggcgtaaaacaataacaaataagcgtaaggcggtaaataaagtggcatagtgtcggtgcgtgtgtt 27551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 1004773 - 1004855
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  1004773 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaattcctaaataca 1004855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 6563497 - 6563415
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  6563497 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 6563415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 6577166 - 6577084
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  6577166 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 6577084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 10721362 - 10721444
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  10721362 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 10721444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 17934971 - 17934893
Alignment:
Q  125 actagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgct 206  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17934971 actagcgtaacggcgtaaaa--ata-aaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtcggtgct 17934893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 22951589 - 22951507
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  22951589 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 22951507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 22965563 - 22965481
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  22965563 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 22965481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 25264498 - 25264416
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  25264498 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 25264416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 25273992 - 25273910
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  25273992 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 25273910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 18954057 - 18954153
Alignment:
Q  139 gtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctag 238  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||            ||||||||||||||||||||||||||||||| ||||||    
T  18954057 gtaaaacaatagaaataagcgtaaagcggtaaataaagtggggtagtgtc------------ggtgcttgtgttacctacattattacatcaattcctag 18954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11918862 - 11918944
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||    
T  11918862 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacaccaattcctaaataca 11918944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11933432 - 11933514
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||    
T  11933432 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacaccaattcctaaataca 11933514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 17563350 - 17563432
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  17563350 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 17563432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 17617147 - 17617229
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17617147 aaagaggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17617229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 7064284 - 7064371
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||    
T  7064284 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgctcgtgttacctacattattacatcaattcctaaataca 7064371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 7097129 - 7097216
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||    
T  7097129 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgctcgtgttacctacattattacatcaattcctaaataca 7097216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 13274628 - 13274541
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | |||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  13274628 agcggaaagcggtaaataaattgtggtagtgtcggtgcaattgtcggtgcttgtgttacctacattattacatcaattcctaaataca 13274541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 16290595 - 16290508
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||| |||||    
T  16290595 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtcttacctacattattacatcaattcctaaataca 16290508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 27978500 - 27978413
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27978500 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27978413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 30101789 - 30101702
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  30101789 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 30101702  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 5144922 - 5145004
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  | | |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||    
T  5144922 aaagcggtaaataaaacgtggtagtgtcggtgcatgtgtcggttcttgtgttacctacattattacatcaattcctaaataca 5145004  T

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Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 6294167 - 6294249
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  6294167 aaagcggtaaataaaatgtggtagtatcggtgcatgtgtcggtgcttgtgttacctatattattacatcaattcctaaataca 6294249  T

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Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 9184122 - 9184172
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9184122 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 9184172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 15684255 - 15684337
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||| |||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  15684255 aaagcgataaataaaatgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 15684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 50826376 - 50826326
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50826376 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 50826326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 31278374 - 31278314
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  31278374 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 31278314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 4504011 - 4504086
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaa 231  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  4504011 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaa 4504086  T

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Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 15675713 - 15675795
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||| |||||||| || | ||||||||||||| |||| |||||||||||||| |||||||||||||||| ||||| |||||    
T  15675713 aaagcgataaataaaatgtggtagtgtcggtgcaagtgtcggtgcttgtgttacatacattattacatcaattcctaaataca 15675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 16814920 - 16814971
Alignment:
Q  11 aaaataaaaggaaaa-acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16814920 aaaataaaaggaaaaaacacttgggttacaaaccaaggtttattaagaaaat 16814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 16815034 - 16815113
Alignment:
Q  125 actagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtg-tcggtgcatgtgttggtgct 206  Q
    ||||| ||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  16815034 actagtgtaacggcgtaaaa--ata-aaataagcgtaaagcggtaaatatagtgggatagtgttcggtgcatgtgtcggtgct 16815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 39706865 - 39706815
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  39706865 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 39706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 15694273 - 15694216
Alignment:
Q  190 gtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  15694273 gtgcaagtgtcggtgcttgtgttaactacattattacatcaattcctagatacattct 15694216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 15696587 - 15696530
Alignment:
Q  190 gtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  15696587 gtgcaagtgtcggtgcttgtgttaactacattattacatcaattcctagatacattct 15696530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 15710877 - 15710820
Alignment:
Q  190 gtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  15710877 gtgcaagtgtcggtgcttgtgttaactacattattacatcaattcctagatacattct 15710820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 41007624 - 41007579
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41007624 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 41007579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 41016403 - 41016358
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41016403 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 41016358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 50849482 - 50849534
Alignment:
Q  11 aaaataaaaggaaaa--acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  50849482 aaaataaaaggaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 50849534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 9184267 - 9184327
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||| |||||    
T  9184267 agtgtcggtgcaagtgtcggtgcttgtgttacctacagtattacatcaattcctaaataca 9184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 17935072 - 17935033
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17935072 aaaaacacttgggttacaaaccaaggtttattaagaaaat 17935033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 27339405 - 27339443
Alignment:
Q  23 aaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27339405 aaaacacttgggttacaaaccaaggtttattaagaaaat 27339443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 27958320 - 27958369
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  27958320 aaaataaaaggaaaa-cacttgggttaccaaccaaggtttattaagaaaat 27958369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 27884460 - 27884419
Alignment:
Q  159 gtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  27884460 gtaaagcggtaaataaagtgagatagtgtcggtgcatgtgtt 27884419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 4435442 - 4435399
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  4435442 aaaataaaaggaaaa-cacttgggttacaaaccaaggtttattaa 4435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 4456233 - 4456190
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  4456233 aaaataaaaggaaaa-cacttgggttacaaaccaaggtttattaa 4456190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 18949982 - 18950033
Alignment:
Q  12 aaataaaaggaaaaa--cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  18949982 aaataaaaggaaaaaagcacttgggttacaagccaaggtttattaagaaaat 18950033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 30063170 - 30063213
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  30063170 aaaataaaaggaaaa-cacttgggttacaaaccaaggtttattaa 30063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 1479760 - 1479713
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  1479760 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 1479713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 3711619 - 3711566
Alignment:
Q  11 aaaataaaagga---aaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  3711619 aaaataaaaggaaaaaaaacacttgggttacaagccaaggtttattaagaaaat 3711566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8153669 - 8153720
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  8153669 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 8153720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 13507797 - 13507836
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13507797 aaaaacacttgggttacaagccaaggtttattaagaaaat 13507836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 18350928 - 18350881
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18350928 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18350881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 24216658 - 24216705
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  24216658 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 24216705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 51922600 - 51922653
Alignment:
Q  11 aaaataaaaggaaaaac---acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  51922600 aaaataaaaggaaaaagcaaacttgggttacaaaccaaggtttattaagaaaat 51922653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17360092 - 17360040
Alignment:
Q  11 aaaataaaagga---aaaacacttgggttacaaaccaaggtttattaagaaaa 60  Q
    ||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  17360092 aaaataaaaggaaaaaaaacacttgggttactaaccaaggtttattaagaaaa 17360040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17364734 - 17364682
Alignment:
Q  11 aaaataaaagga---aaaacacttgggttacaaaccaaggtttattaagaaaa 60  Q
    ||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  17364734 aaaataaaaggaaaaaaaacacttgggttactaaccaaggtttattaagaaaa 17364682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 18040914 - 18040864
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  18040914 aaaataaaaaggaaaacatttgggttacgaaccaaggtttattaagaaaat 18040864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 2256426 - 2256393
Alignment:
Q  28 acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||||||||||    
T  2256426 acttgggttacaaaccaaggtttattaagaaaat 2256393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 14536954 - 14536997
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaa 55  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  14536954 aaaataaaaggaaaa-cacttgggttacgaaccaaggtttattaa 14536997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 2215598 - 2215645
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||| |||||||||||||||||||||||||| ||||| |||||    
T  2215598 gtgtcggtgtttgtgttacctacattattacatcaattcctaaataca 2215645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8196757 - 8196810
Alignment:
Q  11 aaaataaaaggaaaaac---acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||    
T  8196757 aaaataaaaggaaaaagcaaacttgggttacaaaccaagttttattaagaaaat 8196810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8223225 - 8223278
Alignment:
Q  11 aaaataaaaggaaaaac---acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||    
T  8223225 aaaataaaaggaaaaagcaaacttgggttacaaaccaagttttattaagaaaat 8223278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 27551205 - 27551240
Alignment:
Q  26 acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27551205 acacttgggttacaagccaaggtttattaagaaaat 27551240  T

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Target: scaffold0545 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 8335 - 8427
Alignment:
Q  109 ctaaactaaacgagatactagcgtaacggcgtaaaacaata-caaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  8335 ctaaactaaacggtatactagcgtaacggcgtaaaacaataacaaataagcgtaaggcggtaaataaagtggcatagtgtcggtgcgtgtgtt 8427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0545; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 8251 - 8286
Alignment:
Q  26 acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8251 acacttgggttacaagccaaggtttattaagaaaat 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 21986830 - 21986912
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  21986830 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 21986912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 21995478 - 21995560
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  21995478 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 21995560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 26079016 - 26079098
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  26079016 aaagcggtaaataaaatgtgatagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 26079098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 26088995 - 26089077
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  26088995 aaagcggtaaataaaatgtgatagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 26089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 26176766 - 26176684
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  26176766 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaactcctaaataca 26176684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 27063765 - 27063683
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  27063765 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctagataca 27063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 3477423 - 3477505
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  3477423 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 3477505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 3492193 - 3492275
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  3492193 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 3492275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27220804 - 27220886
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27220804 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27220886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27223809 - 27223891
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27223809 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27223891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27233280 - 27233362
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27233280 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27233362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 33835801 - 33835883
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  33835801 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 33835883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 33844497 - 33844579
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  33844497 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 33844579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 31548698 - 31548786
Alignment:
Q  155 aagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  31548698 aagcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 31548786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 21851292 - 21851379
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  21851292 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 21851379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 12170749 - 12170831
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||    
T  12170749 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacaccaattcctaaataca 12170831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 12180178 - 12180260
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||    
T  12180178 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacaccaattcctaaataca 12180260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 20377447 - 20377365
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  20377447 aaagcggtaaataagatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 20377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 20386236 - 20386154
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  20386236 aaagcggtaaataagatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 20386154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 23038838 - 23038756
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23038838 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctacataca 23038756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 23637018 - 23636940
Alignment:
Q  165 cggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23637018 cggtaaataaattgtgatagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23636940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 23828414 - 23828492
Alignment:
Q  165 cggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23828414 cggtaaataaattgtgatagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23828492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 23835872 - 23835950
Alignment:
Q  165 cggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23835872 cggtaaataaattgtgatagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23835950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 36458319 - 36458237
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  36458319 aaagcggtaaataaaatgtggtagtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 36458237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11803010 - 11803093
Alignment:
Q  161 aaagcggtaaataaag-tgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  11803010 aaagcggtaaataaaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 11803093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11813086 - 11813169
Alignment:
Q  161 aaagcggtaaataaag-tgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  11813086 aaagcggtaaataaaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 11813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 23984489 - 23984402
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23984489 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23984402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 41094219 - 41094279
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  41094219 agtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 41094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 19225692 - 19225643
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaa 60  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19225692 aaaataaaaggaaaaatacttgggttacaaaccaaggtttattaagaaaa 19225643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20371083 - 20371133
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20371083 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 20371133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20396786 - 20396836
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20396786 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 20396836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 43597049 - 43597099
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  43597049 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 43597099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 43629843 - 43629893
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  43629843 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 43629893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 24955840 - 24955885
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  24955840 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 24955885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 24964300 - 24964345
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  24964300 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 24964345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 28845004 - 28844959
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  28845004 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 28844959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 28853614 - 28853569
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  28853614 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 28853569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 21931288 - 21931237
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  21931288 aaaataaaaggaaaaaacacttgggttactaaccaaggtttattaagaaaat 21931237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 31412677 - 31412626
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  31412677 aaaataaaaggaaaagcaacttgggttacaaaccaaggtttattaagaaaat 31412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 1727160 - 1727211
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  1727160 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 1727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 17642142 - 17642095
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17642142 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17642095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 23026157 - 23026204
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  23026157 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 23026204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1481 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1481
Description:

Target: scaffold1481; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 1199 - 1117
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  1199 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 14570 - 14488
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  14570 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 14488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 194461 - 194379
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  194461 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 194379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 188372 - 188339
Alignment:
Q  28 acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||||||||||||||||||    
T  188372 acttgggttacaaaccaaggtttattaagaaaat 188339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 2548646 - 2548564
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  2548646 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 2548564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 2562532 - 2562450
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  2562532 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 2562450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 16890211 - 16890293
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16890211 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27966419 - 27966501
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27966419 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 27975872 - 27975954
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  27975872 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 27975954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 16545162 - 16545075
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16545162 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16545075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 16620500 - 16620587
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  16620500 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 16620587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 5199630 - 5199712
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  5199630 aaagcggtaaataaaatgtggtagtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 5199712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 5208759 - 5208841
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  5208759 aaagcggtaaataaaatgtggtagtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 5208841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 15185244 - 15185162
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  15185244 aaagcggtaaataaaatgtggtggtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 15185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 15199864 - 15199782
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  15199864 aaagcggtaaataaaatgtggtggtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 15199782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 27434950 - 27434869
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatac 242  Q
    |||||||||||||||  | | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  27434950 aaagcggtaaataaaacgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaatac 27434869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 27443980 - 27443899
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatac 242  Q
    |||||||||||||||  | | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  27443980 aaagcggtaaataaaacgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaatac 27443899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 558919 - 559002
Alignment:
Q  161 aaagcggtaaataaag-tgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  558919 aaagcggtaaataaaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 559002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 568829 - 568912
Alignment:
Q  161 aaagcggtaaataaag-tgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  568829 aaagcggtaaataaaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 568912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 29023124 - 29023037
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  29023124 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 29023037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 29031562 - 29031475
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  29031562 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 29031475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 16121146 - 16121228
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||| |||||    
T  16121146 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcgtgtgttacctacattattacatcaattcctaaataca 16121228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 16147885 - 16147967
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||| |||||    
T  16147885 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcgtgtgttacctacattattacatcaattcctaaataca 16147967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 16244384 - 16244297
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | |||||| |||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||    
T  16244384 agcggaaagcggtaaataaattgtggtagtgttggtgcaagtgtcggtgctcgtgttacctacattattacatcaattcctaaataca 16244297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 4323518 - 4323447
Alignment:
Q  125 actagcgtaacggcgtaaaacaatacaaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    |||||||||||| ||||||| ||    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4323518 actagcgtaacgacgtaaaataa----aataagcgtaaagaggtaaataaagtgggatagtgtcggtgcatgtgtt 4323447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 4662229 - 4662280
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggttta-ttaagaaaat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4662229 aaaataaaaggaaaaacacttgggttacaaaccaaggtttatttaagaaaat 4662280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 16227506 - 16227419
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | |||||| |||||| || | |||||| |||||||||||||||||||||||| ||||| |||||    
T  16227506 agcggaaagcggtaaataaattgtggtagtgttggtgcaagtttcggtgctcgtgttacctacattattacatcaattcctaaataca 16227419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 1887267 - 1887317
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  1887267 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 1887317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 1901368 - 1901418
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  1901368 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 1901418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 18303403 - 18303453
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  18303403 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 18303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 24186465 - 24186515
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  24186465 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 24186515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10442036 - 10441984
Alignment:
Q  11 aaaataaaaggaaaaa--cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  10442036 aaaataaaaggaaaaaaacacttgggttacaaaccaaggtttattaagaaaat 10441984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 13832568 - 13832523
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  13832568 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 13832523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 13840598 - 13840553
Alignment:
Q  16 aaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  13840598 aaaaggaaagacacttgggttacaaaccaaggtttattaagaaaat 13840553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17739729 - 17739779
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  17739729 aaaataaaagaaaaaacaattgggttacaaagcaaggtttattaagaaaat 17739779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 16910283 - 16910372
Alignment:
Q  151 aaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||| ||| |||||||||| ||||||  || ||||||||||  |||| | ||||||||||||||||||||||||||||| ||||| |||||    
T  16910283 aaataaacgtgaagcggtaaagaaagtg--attgtgtcggtgcg-gtgtcgatgcttgtgttacctacattattacatcaattcctaaataca 16910372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 17210961 - 17210914
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17210961 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17210914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 17514830 - 17514877
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17514830 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 17538384 - 17538337
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  17538384 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 17538337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 29081651 - 29081604
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  29081651 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 29081604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 29096410 - 29096363
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  29096410 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 29096363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 40679639 - 40679592
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  40679639 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 40679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 44075700 - 44075747
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  44075700 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 44075747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 36477207 - 36477296
Alignment:
Q  151 aaataagcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||||||| ||||||  |||||  || ||||||||||  || | |||| |||||||||||||||||||||||||| ||||| |||||    
T  36477207 aaataagcgtaaagaggtaaaggaagtg--attgtgtcggtgcg-gtatcggtgtttgtgttacctacattattacatcaattcctaaataca 36477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 4323623 - 4323572
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| ||||||||||| || |||||||||| |||||||||    
T  4323623 aaaataaaaggaaaaaacacttgggttaaaatccaaggtttaataagaaaat 4323572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 33533701 - 33533752
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| ||||||||||| || |||||||||| |||||||||    
T  33533701 aaaataaaaggaaaaagcacttgggttaaaatccaaggtttactaagaaaat 33533752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 43600411 - 43600360
Alignment:
Q  11 aaaataaaaggaaaaa-cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||| ||||||||||| || ||||||||| ||||||||||    
T  43600411 aaaataaaaggaaaaaacacttgggttaaaatccaaggtttcttaagaaaat 43600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 10786362 - 10786280
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  10786362 aaagcggtaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 10786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 21399474 - 21399561
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  21399474 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 21399561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 24924330 - 24924243
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  24924330 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 24924243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 4748064 - 4748146
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  4748064 aaagcggtaaataaaatgtggtagtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 4748146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 14719151 - 14719238
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  14719151 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 14719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 14737393 - 14737480
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  14737393 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 14737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 18009803 - 18009716
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||| ||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  18009803 agcggaaaacggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 18009716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 19645517 - 19645604
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  19645517 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 19645604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 25247764 - 25247851
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| || | ||||||||||||||||||||||||||||||| ||||| |||||    
T  25247764 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtttcggtgcttgtgttacctacattattacatcaattcctaaataca 25247851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 19759529 - 19759447
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  19759529 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 19759447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 19774285 - 19774203
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  19774285 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctagattattacatcaattcctaaataca 19774203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21530811 - 21530872
Alignment:
Q  186 gtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21530811 gtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctagatacattct 21530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 20866317 - 20866381
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||| |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20866317 agtgttggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctagatacattct 20866381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 773015 - 772965
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  773015 aaaataaaaggaaaaacccttgggttacaaaccaaggtttattaagaaaat 772965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20866163 - 20866213
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20866163 aaaataaaaggaaaaacccttgggttacaaaccaaggtttattaagaaaat 20866213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 52297570 - 52297525
Alignment:
Q  202 gtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  52297570 gtgcttgtgttacctacattattacatcaactcctagatacattct 52297525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 1876044 - 1876106
Alignment:
Q  184 gtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  1876044 gtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatc-attcctagatacattct 1876106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 1890159 - 1890221
Alignment:
Q  184 gtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  1890159 gtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatc-attcctagatacattct 1890221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 27342050 - 27342100
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  27342050 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 27342100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 772862 - 772811
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagatacattct 247  Q
    |||| |||||||||||||||||||||||||  |||| |||||||||||||||    
T  772862 gtgtcggtgcttgtgttacctacattattaggtcaattcctagatacattct 772811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 1875886 - 1875939
Alignment:
Q  11 aaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  1875886 aaaataaaaggaaaaaggacacttgggttacaagccaaggtttattaagaaaat 1875939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 1890001 - 1890054
Alignment:
Q  11 aaaataaaaggaaaaa---cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  1890001 aaaataaaaggaaaaaggacacttgggttacaagccaaggtttattaagaaaat 1890054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8093275 - 8093326
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  8093275 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 8093326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8102080 - 8102131
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  8102080 aaaataaaaggaaaagcaacttgggttacaagccaaggtttattaagaaaat 8102131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 10640198 - 10640159
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10640198 aaaaacacttgggttacaagccaaggtttattaagaaaat 10640159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 34842424 - 34842377
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  34842424 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 34842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 21530668 - 21530703
Alignment:
Q  26 acacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21530668 acacttgggttacaagccaaggtttattaagaaaat 21530703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 26211062 - 26211109
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||||||||||| |||||||||||| ||||| |||||    
T  26211062 gtgtcggtgcttgtgttacctacgttattacatcaattcctaaataca 26211109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 26219822 - 26219869
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||||||||||| |||||||||||| ||||| |||||    
T  26219822 gtgtcggtgcttgtgttacctacgttattacatcaattcctaaataca 26219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 55586260 - 55586307
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| |||||||||||| |||||||||||||||||| ||||| |||||    
T  55586260 gtgtcggtgcttgtgttgcctacattattacatcaattcctaaataca 55586307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 10640081 - 10640043
Alignment:
Q  162 aagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  10640081 aagcggtaaataaagtggcatagtgtcggtgcgtgtgtt 10640043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 12425756 - 12425808
Alignment:
Q  11 aaaataaaaggaaaaac--acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   ||||||||||| ||||| ||||||||||||||||    
T  12425756 aaaataaaaggaaaaagcaacttgggttacgaaccacggtttattaagaaaat 12425808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 12998397 - 12998343
Alignment:
Q  11 aaaataaaaggaaaaa----cacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||     |||||||||||||||||||||||||||| |||||    
T  12998397 aaaataaaaggaaaaaaagcaacttgggttacaaaccaaggtttattaaaaaaat 12998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1547 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1547
Description:

Target: scaffold1547; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 1322 - 1240
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  1322 aaagcggtaaataaattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 603 - 685
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||| ||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  603 aaagcggcaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 12171 - 12089
Alignment:
Q  161 aaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||| ||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  12171 aaagcggcaaataaaatgtggtagtgtcggtgcatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 12089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 1176 - 1088
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagatacat 244  Q
    |||| ||||||||||||||| || | ||||||||||||| |||| | ||||||||||||||||||||||||||||| ||||| ||||||    
T  1176 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcgttgcttgtgttacctacattattacatcaattcctaaatacat 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 1314 - 1265
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1314 aaaataaaaggaaaa-cacttgggttacaaaccaaggtttattaagaaaat 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 1497 - 1410
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | |||||| |||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  1497 agcggaaagcggtaaataaattgtggtagtgttggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0703 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0703
Description:

Target: scaffold0703; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 6035 - 6122
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||| || | ||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||    
T  6035 agcggaaagcggtaaataaattgtggtagtgtcggtgcaagtgtcagtgcttgtgttacctacattattacatcaattcctaaataca 6122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 83135 - 83048
Alignment:
Q  156 agcgtaaagcggtaaataaagtgggatagtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||| | || | ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  83135 agcggaaagcggtaaatatattgtggtagtgtcggtgcaagtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 83048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 62930 - 62870
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  62930 agtgtcggtgcatgtgtcggtgcttgtgttacctatattattacatcaattcctaaataca 62870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 47119 - 47179
Alignment:
Q  183 agtgtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  47119 agtgtcggtgtatgtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 47179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 12552 - 12501
Alignment:
Q  11 aaaataaaaggaaaaaca-cttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12552 aaaataaaaggaaaaacaacttgggttacaaaccaaggtttattaagaaaat 12501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 12425 - 12387
Alignment:
Q  162 aagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12425 aagcggtaaataaagtggcatagtgtcggtgcatgtgtt 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 25444 - 25394
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  25444 aaaataaaaaggaaaacacttgggttacaaaccaaggtttattaagaaaat 25394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 123012 - 122963
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  123012 aaaataaaaggaaaa-cacttggtttacaaaccaaggtttattaagaaaat 122963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 32133 - 32076
Alignment:
Q  186 gtcggtgcatgtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||| ||||| |||||    
T  32133 gtcggtgtatgtgccggtgcttgtgttacctacattattacatcaattcctaaataca 32076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 4254 - 4301
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactcctagataca 243  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  4254 gtgtcggtgcttgtgttacctacattattacatcaattcctaaataca 4301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 19611 - 19572
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19611 aaaaacacttgggttacagaccaaggtttattaagaaaat 19572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 38983 - 39022
Alignment:
Q  22 aaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  38983 aaaaacacttgggttacaagccaaggtttattaagaaaat 39022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 39100 - 39138
Alignment:
Q  162 aagcggtaaataaagtgggatagtgtcggtgcatgtgtt 200  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  39100 aagcggtaaataaagtggcatagtgtcggtgcgtgtgtt 39138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 37629 - 37588
Alignment:
Q  196 gtgttggtgcttgtgttacctacattattacatcaactccta 237  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  37629 gtgtcggtgcttgtgttacctacattattacatcaattccta 37588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10243 - 10194
Alignment:
Q  11 aaaataaaaggaaaaacacttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||| ||||||||||| |  ||||||||||||||||||||    
T  10243 aaaataaaaggaaaa-cacttgggttaaagtccaaggtttattaagaaaat 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 4219 - 4167
Alignment:
Q  11 aaaataaaaggaaaaac--acttgggttacaaaccaaggtttattaagaaaat 61  Q
    ||||||||||||||||   ||||||||||| ||||| ||||||||||||||||    
T  4219 aaaataaaaggaaaaagcaacttgggttacgaaccacggtttattaagaaaat 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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