View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13222_high_3 (Length: 562)

Name: NF13222_high_3
Description: NF13222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13222_high_3
NF13222_high_3
[»] chr6 (28 HSPs)
chr6 (18-506)||(3586484-3586967)
chr6 (397-509)||(7612547-7612662)
chr6 (399-505)||(3299833-3299942)
chr6 (397-509)||(31386798-31386913)
chr6 (409-509)||(31879469-31879571)
chr6 (435-509)||(20774126-20774203)
chr6 (397-497)||(13480207-13480310)
chr6 (421-502)||(1066416-1066500)
chr6 (508-550)||(3585865-3585907)
chr6 (396-497)||(32337562-32337666)
chr6 (397-497)||(5064334-5064437)
chr6 (398-466)||(20994819-20994890)
chr6 (396-497)||(15819772-15819876)
chr6 (395-468)||(16704620-16704696)
chr6 (398-498)||(8427200-8427303)
chr6 (397-497)||(13480490-13480593)
chr6 (397-497)||(30234874-30234977)
chr6 (398-497)||(737979-738081)
chr6 (398-497)||(21880364-21880466)
chr6 (398-497)||(23292026-23292128)
chr6 (397-495)||(3299558-3299659)
chr6 (399-497)||(23291745-23291846)
chr6 (401-497)||(5064617-5064716)
chr6 (396-449)||(20560926-20560979)
chr6 (508-552)||(3575339-3575383)
chr6 (395-497)||(32337849-32337953)
chr6 (400-449)||(7612882-7612931)
chr6 (398-497)||(21880646-21880748)
[»] chr4 (35 HSPs)
chr4 (395-509)||(8286929-8287046)
chr4 (409-509)||(35730931-35731034)
chr4 (398-497)||(47981918-47982020)
chr4 (399-506)||(32846363-32846473)
chr4 (396-505)||(50246132-50246244)
chr4 (396-497)||(54961429-54961533)
chr4 (399-505)||(37678122-37678231)
chr4 (451-501)||(489462-489512)
chr4 (451-501)||(515254-515304)
chr4 (451-505)||(27813105-27813159)
chr4 (396-497)||(53559669-53559773)
chr4 (409-497)||(34238481-34238572)
chr4 (397-497)||(47862434-47862536)
chr4 (398-497)||(13872069-13872171)
chr4 (398-497)||(13872351-13872453)
chr4 (395-497)||(8287215-8287320)
chr4 (409-507)||(45199138-45199239)
chr4 (396-497)||(22249731-22249835)
chr4 (400-497)||(47980687-47980787)
chr4 (393-497)||(12691401-12691508)
chr4 (398-506)||(19916929-19917040)
chr4 (397-497)||(20086436-20086539)
chr4 (397-497)||(22250015-22250118)
chr4 (397-497)||(33294425-33294528)
chr4 (385-495)||(33294131-33294244)
chr4 (388-509)||(20600937-20601061)
chr4 (451-509)||(48507470-48507528)
chr4 (410-497)||(50245869-50245959)
chr4 (398-449)||(27813188-27813239)
chr4 (396-497)||(12691687-12691791)
chr4 (454-499)||(10128765-10128810)
chr4 (396-468)||(48507728-48507803)
chr4 (397-497)||(53475830-53475933)
chr4 (398-497)||(47862152-47862254)
chr4 (396-499)||(52816419-52816525)
[»] chr2 (32 HSPs)
chr2 (397-509)||(9694012-9694127)
chr2 (409-509)||(28599438-28599541)
chr2 (398-509)||(5608864-5608978)
chr2 (396-497)||(43681854-43681958)
chr2 (398-497)||(17580328-17580430)
chr2 (396-497)||(16366961-16367065)
chr2 (384-497)||(45663790-45663906)
chr2 (401-497)||(19606920-19607019)
chr2 (417-509)||(37984746-37984841)
chr2 (398-495)||(10446832-10446932)
chr2 (396-497)||(22731814-22731918)
chr2 (401-509)||(18477146-18477257)
chr2 (397-509)||(22309701-22309816)
chr2 (407-497)||(16367245-16367338)
chr2 (396-497)||(20911128-20911232)
chr2 (398-497)||(20911412-20911513)
chr2 (458-505)||(4375612-4375659)
chr2 (395-509)||(17284740-17284849)
chr2 (396-497)||(22309429-22309533)
chr2 (417-503)||(41846668-41846757)
chr2 (396-497)||(32519437-32519541)
chr2 (460-509)||(43682127-43682176)
chr2 (394-497)||(1149933-1150039)
chr2 (398-497)||(28599709-28599811)
chr2 (398-497)||(32519155-32519257)
chr2 (398-449)||(17366766-17366817)
chr2 (398-449)||(28599567-28599618)
chr2 (397-448)||(45663700-45663751)
chr2 (396-497)||(1150219-1150323)
chr2 (409-506)||(9959098-9959198)
chr2 (396-490)||(17580613-17580711)
chr2 (454-498)||(19620790-19620834)
[»] chr1 (41 HSPs)
chr1 (396-506)||(35312249-35312362)
chr1 (388-509)||(48380671-48380795)
chr1 (396-509)||(24701539-24701655)
chr1 (435-509)||(30830401-30830475)
chr1 (451-506)||(10019646-10019701)
chr1 (395-497)||(12577007-12577112)
chr1 (399-497)||(37152820-37152921)
chr1 (396-497)||(1047486-1047590)
chr1 (397-497)||(26953100-26953203)
chr1 (417-509)||(46545001-46545096)
chr1 (398-466)||(49990109-49990180)
chr1 (396-497)||(739217-739321)
chr1 (384-497)||(49003157-49003272)
chr1 (397-497)||(25414843-25414946)
chr1 (398-497)||(2953464-2953566)
chr1 (398-497)||(2953746-2953848)
chr1 (396-503)||(8890485-8890595)
chr1 (395-497)||(6056373-6056478)
chr1 (397-509)||(33030333-33030448)
chr1 (409-497)||(33347698-33347789)
chr1 (401-497)||(49002879-49002978)
chr1 (398-497)||(5183788-5183890)
chr1 (397-496)||(6334655-6334757)
chr1 (398-497)||(29043037-29043139)
chr1 (398-497)||(46849940-46850042)
chr1 (399-497)||(5183507-5183608)
chr1 (398-497)||(6056660-6056763)
chr1 (396-497)||(29042754-29042857)
chr1 (396-497)||(35311972-35312076)
chr1 (397-497)||(1040297-1040400)
chr1 (397-497)||(1047203-1047306)
chr1 (398-446)||(5926857-5926905)
chr1 (397-449)||(46364573-46364625)
chr1 (407-497)||(5926528-5926621)
chr1 (399-497)||(29980920-29981021)
chr1 (451-506)||(52455028-52455083)
chr1 (391-468)||(24701263-24701343)
chr1 (396-497)||(33030617-33030720)
chr1 (401-497)||(29980642-29980741)
chr1 (397-497)||(48380965-48381068)
chr1 (409-445)||(35312180-35312216)
[»] chr5 (32 HSPs)
chr5 (390-509)||(22024140-22024262)
chr5 (410-503)||(21260877-21260973)
chr5 (384-509)||(41339623-41339751)
chr5 (412-509)||(22533660-22533760)
chr5 (397-506)||(34404483-34404594)
chr5 (399-506)||(18934714-18934824)
chr5 (398-497)||(8323338-8323440)
chr5 (394-497)||(32052506-32052612)
chr5 (409-503)||(8323067-8323164)
chr5 (397-497)||(25253368-25253471)
chr5 (397-497)||(25317159-25317262)
chr5 (397-497)||(37944993-37945096)
chr5 (398-497)||(13064691-13064793)
chr5 (398-509)||(16118221-16118335)
chr5 (407-497)||(14745595-14745688)
chr5 (399-497)||(25253087-25253188)
chr5 (399-497)||(25316877-25316978)
chr5 (396-497)||(33735595-33735699)
chr5 (397-497)||(7015507-7015610)
chr5 (397-497)||(32052223-32052326)
chr5 (397-497)||(33735312-33735415)
chr5 (398-509)||(7015779-7015893)
chr5 (398-497)||(12991070-12991172)
chr5 (454-506)||(17968617-17968669)
chr5 (434-509)||(27753749-27753827)
chr5 (395-497)||(37945276-37945380)
chr5 (397-509)||(8654106-8654221)
chr5 (397-497)||(14745447-14745550)
chr5 (400-449)||(41339549-41339598)
chr5 (398-449)||(27753672-27753723)
chr5 (398-451)||(9915431-9915484)
chr5 (398-462)||(16118144-16118211)
[»] scaffold0279 (2 HSPs)
scaffold0279 (396-506)||(11130-11243)
scaffold0279 (398-497)||(10853-10955)
[»] chr7 (27 HSPs)
chr7 (396-506)||(27557846-27557959)
chr7 (398-497)||(27558134-27558236)
chr7 (396-497)||(37563636-37563740)
chr7 (413-509)||(5636041-5636139)
chr7 (386-509)||(5280541-5280667)
chr7 (393-497)||(34454479-34454586)
chr7 (412-503)||(47082123-47082212)
chr7 (451-506)||(19980006-19980061)
chr7 (392-506)||(20947187-20947304)
chr7 (435-509)||(44545865-44545942)
chr7 (396-497)||(26825628-26825732)
chr7 (397-498)||(5280271-5280375)
chr7 (397-497)||(43937893-43937996)
chr7 (397-497)||(43938176-43938279)
chr7 (398-449)||(15827914-15827965)
chr7 (396-498)||(7159210-7159314)
chr7 (396-497)||(12928035-12928138)
chr7 (459-509)||(47121342-47121392)
chr7 (397-497)||(37563353-37563456)
chr7 (451-495)||(26830025-26830069)
chr7 (399-465)||(12928353-12928422)
chr7 (407-497)||(12931020-12931113)
chr7 (454-497)||(40022527-40022570)
chr7 (399-450)||(47121610-47121661)
chr7 (396-497)||(47081845-47081949)
chr7 (397-497)||(12929536-12929639)
chr7 (464-509)||(15827991-15828036)
[»] chr3 (25 HSPs)
chr3 (399-509)||(21255801-21255914)
chr3 (396-509)||(38642930-38643042)
chr3 (412-509)||(30890221-30890321)
chr3 (451-509)||(28310618-28310676)
chr3 (397-497)||(1741386-1741489)
chr3 (397-497)||(22129005-22129108)
chr3 (419-506)||(46670528-46670618)
chr3 (400-509)||(30803848-30803960)
chr3 (396-497)||(51279229-51279333)
chr3 (397-509)||(33989014-33989128)
chr3 (395-505)||(33457913-33458026)
chr3 (396-505)||(30654754-30654865)
chr3 (399-497)||(30804130-30804231)
chr3 (397-497)||(10749317-10749420)
chr3 (396-449)||(35432404-35432457)
chr3 (409-497)||(40256885-40256976)
chr3 (401-497)||(55036951-55037050)
chr3 (399-497)||(33458200-33458301)
chr3 (396-497)||(11312733-11312837)
chr3 (409-497)||(21300415-21300506)
chr3 (398-447)||(35432493-35432542)
chr3 (399-497)||(10998155-10998256)
chr3 (398-468)||(53037027-53037100)
chr3 (412-449)||(38642836-38642873)
chr3 (396-449)||(40257206-40257259)
[»] chr8 (40 HSPs)
chr8 (398-501)||(9632328-9632434)
chr8 (397-509)||(23514020-23514135)
chr8 (396-497)||(25287790-25287894)
chr8 (409-505)||(13566421-13566520)
chr8 (397-509)||(31689894-31690009)
chr8 (397-509)||(40422430-40422545)
chr8 (460-515)||(38619907-38619962)
chr8 (396-497)||(7675-7779)
chr8 (401-497)||(27857024-27857123)
chr8 (410-497)||(22763878-22763968)
chr8 (398-497)||(43866993-43867095)
chr8 (451-506)||(15716149-15716204)
chr8 (410-449)||(23514161-23514200)
chr8 (395-497)||(41251120-41251225)
chr8 (396-497)||(29190441-29190545)
chr8 (396-497)||(36623635-36623739)
chr8 (397-497)||(29190159-29190262)
chr8 (397-497)||(40422159-40422262)
chr8 (397-497)||(43866710-43866813)
chr8 (410-497)||(547717-547807)
chr8 (398-497)||(23424794-23424896)
chr8 (398-449)||(9632468-9632519)
chr8 (451-506)||(24529734-24529789)
chr8 (454-509)||(33497075-33497130)
chr8 (395-465)||(36623349-36623422)
chr8 (391-509)||(37713689-37713810)
chr8 (398-499)||(27437515-27437619)
chr8 (396-497)||(40525505-40525609)
chr8 (393-497)||(20096015-20096122)
chr8 (397-497)||(40525789-40525892)
chr8 (400-497)||(41801818-41801918)
chr8 (409-468)||(20096335-20096397)
chr8 (391-497)||(11478138-11478247)
chr8 (419-497)||(11478427-11478508)
chr8 (399-465)||(26740032-26740101)
chr8 (398-499)||(27436563-27436667)
chr8 (395-465)||(37342779-37342852)
chr8 (396-497)||(41182178-41182282)
chr8 (396-468)||(9632614-9632689)
chr8 (409-497)||(38619809-38619900)
[»] scaffold0206 (1 HSPs)
scaffold0206 (391-497)||(10318-10427)
[»] scaffold1493 (1 HSPs)
scaffold1493 (396-497)||(875-979)
[»] scaffold0233 (2 HSPs)
scaffold0233 (400-509)||(8435-8547)
scaffold0233 (396-497)||(8714-8818)
[»] scaffold0022 (2 HSPs)
scaffold0022 (396-497)||(120482-120584)
scaffold0022 (396-503)||(120203-120307)
[»] scaffold0182 (1 HSPs)
scaffold0182 (389-509)||(13125-13248)
[»] scaffold0202 (1 HSPs)
scaffold0202 (409-508)||(14246-14348)
[»] scaffold0201 (1 HSPs)
scaffold0201 (396-449)||(13891-13944)
[»] scaffold0321 (1 HSPs)
scaffold0321 (397-449)||(10995-11047)
[»] scaffold0251 (1 HSPs)
scaffold0251 (396-495)||(12017-12119)


Alignment Details
Target: chr6 (Bit Score: 373; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 18 - 506
Target Start/End: Complemental strand, 3586967 - 3586484
Alignment:
Q  18 aaatcttttcaggaaaattcattgaacaaatcaagagtttgcataaaccgctatgttttatattctgtttttgcgactacataaatgggaatgaacaagc 117  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3586967 aaatcttttcttgaaaattcattgaacaaatctagagtttgcataaaccgctatgttttatattctgtttttgcaactacataaatgggaatgaacaagc 3586868  T
Q  118 ttattcattacacaactatatatgaatgcaatttccacta--aggatccattttctaatttttattctatcaaatgatcataataactaaaagattattc 215  Q
    || ||||||||||||||||||  |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3586867 ttgttcattacacaactatat--gaatgcaatttctactataaggatccattttctaatttttattctatcaaatgatcataataactaaaagattattc 3586770  T
Q  216 aacaagcaaatttcataaccaacctacagtgattttgcctttatggtatacggtataccgtaccaacttcactaaattattttcctatgagctactctta 315  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3586769 aacaagcaaatttcataaccaacctagagtgattttgcctttatggtatacggtataccgtaccaacttcactaaattattttcctatgaactactctta 3586670  T
Q  316 tgcaacagaagtaaacaagcatgatgttatgtaaatttatcattggttacaaactcatgctataataatatattataattaaggcttaaacatgtctttc 415  Q
    |||||||     ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||    
T  3586669 tgcaaca-----aaacaagcatgatgttatgtaaatttatcattggttacaaactcatggtatgataatatattataattaacgcttaaacaggtctttc 3586575  T
Q  416 gtccctgtaaatatagactatttgaattttcgtctaagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    ||||||| |||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  3586574 gtccctgcaaatatagactatttgaattttcgtccaaattactattccttccattttgccattgcaaatattaatcatttaaaaaatggtc 3586484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 7612547 - 7612662
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||| |||||||||| |||||||||||||||    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  7612547 aggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaattctttcattttgtcattgcaaatattaatcat 7612646  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  7612647 ttgaaaaatggtccta 7612662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 399 - 505
Target Start/End: Complemental strand, 3299942 - 3299833
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| |||| ||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |||||||| ||||||||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcattt 3299843  T
Q  496 gaaaaatggt 505  Q
    ||||||||||    
T  3299842 gaaaaatggt 3299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 31386798 - 31386913
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | || |||| |||||||||||||||  ||||||||| ||||||    ||||| |||||||||||||||||  ||||||| ||||||||||    
T  31386798 aggcttaaataggtgtttcatccctgtaaatataggatatttgaatattcgtccttgaagttgctaatccttccattttgcaattgcaaatattaatcat 31386897  T
Q  494 ttgaaaaatggtccta 509  Q
    |||||||||| |||||    
T  31386898 ttgaaaaatgatccta 31386913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 509
Target Start/End: Original strand, 31879469 - 31879571
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||| |||||| | | |||||||||||||||    |||||||||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  31879469 gtctttcgtccctgcaaatatggtc-atttgaattttcgtccccgaagttactaatctttccattttgccattgcaaatattaataatttgaaaaatggt 31879567  T
Q  506 ccta 509  Q
    ||||    
T  31879568 ccta 31879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 509
Target Start/End: Original strand, 20774126 - 20774203
Alignment:
Q  435 atttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||||||||    |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  20774126 atttgaattttcgtccttgaagttattaatcctttcattttgtcattgcaaatattaatcatttgaaaaatggtccta 20774203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 13480207 - 13480310
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| |||||||| | |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  13480207 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 13480306  T
Q  494 ttga 497  Q
    ||||    
T  13480307 ttga 13480310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 502
Target Start/End: Complemental strand, 1066500 - 1066416
Alignment:
Q  421 tgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaat 502  Q
    ||||||||||||  |||||||||||||||    |||||||||||  |||||||||| |||||||| |||||||||||||||||||    
T  1066500 tgtaaatatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaaaaat 1066416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 508 - 550
Target Start/End: Complemental strand, 3585907 - 3585865
Alignment:
Q  508 tattggatgaaacaaggttttcatgataatcaattgtcatatt 550  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3585907 tattggatgaaacaaggttttcatgataatcaattgtcatatt 3585865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 32337562 - 32337666
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||| | |||||||||||||| |||||||||| |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  32337562 aaggtttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatca 32337661  T
Q  493 tttga 497  Q
    |||||    
T  32337662 tttga 32337666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 5064334 - 5064437
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||||||||||||||    |||||||||||||||    |||||||||||||| ||| |||| |  ||||| ||||||||||    
T  5064334 aggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcat 5064433  T
Q  494 ttga 497  Q
    ||||    
T  5064434 ttga 5064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 466
Target Start/End: Original strand, 20994819 - 20994890
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttc 466  Q
    |||||||| |||||||||||||||||||||||||   ||||||||||||||||   ||||||||||||||||    
T  20994819 ggcttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatccttc 20994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 15819876 - 15819772
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | |  | |||||| || ||||||    
T  15819876 aaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatca 15819777  T
Q  493 tttga 497  Q
    |||||    
T  15819776 tttga 15819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 468
Target Start/End: Complemental strand, 16704696 - 16704620
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttcca 468  Q
    ||||||||||| | |||||||||||||| |||||||| | |||||||||||||||    ||||||||||||||||||    
T  16704696 taaggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatccttcca 16704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 498
Target Start/End: Original strand, 8427200 - 8427303
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| ||||||||| ||| || ||||||||   ||||||||||||||||   |||||||||||||| |||||||| |  ||||| ||||||||| |    
T  8427200 ggcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcagt 8427299  T
Q  495 tgaa 498  Q
    ||||    
T  8427300 tgaa 8427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 13480593 - 13480490
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| |||||||||||   |||||||||||||||    |||||||||||||||||| | || |  | ||| ||||||||||    
T  13480593 aggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcat 13480494  T
Q  494 ttga 497  Q
    ||||    
T  13480493 ttga 13480490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 30234977 - 30234874
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| ||||||||  | ||||||||||| ||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  30234977 aggcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 30234878  T
Q  494 ttga 497  Q
    ||||    
T  30234877 ttga 30234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 738081 - 737979
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  | ||| |||||||||||    
T  738081 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcatt 737982  T
Q  495 tga 497  Q
    |||    
T  737981 tga 737979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 21880364 - 21880466
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| ||||||||||| ||||||||||||    ||||||||||||||||   ||||||||||||||| || | || |  ||||| |||||||||||    
T  21880364 ggcttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 21880463  T
Q  495 tga 497  Q
    |||    
T  21880464 tga 21880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 23292128 - 23292026
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| ||||||||||||| || ||||||||   |||||||||||||||    |||||||||||||||||| | | ||  ||||| |||||||||||    
T  23292128 ggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcatt 23292029  T
Q  495 tga 497  Q
    |||    
T  23292028 tga 23292026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 495
Target Start/End: Original strand, 3299558 - 3299659
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||| ||| |||||||    ||||||||||||||| |   ||||||||||| ||||| |||| |||||||| ||||||||||    
T  3299558 aggcttaaataggtctttcgtctctgcaaatataagtcatttgaattttcgtccatgaagttactaatcattccaatttgccattgcaaatattaatcat 3299657  T
Q  494 tt 495  Q
    ||    
T  3299658 tt 3299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 23291745 - 23291846
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| |||||||||||||||  |||||||| | |||||||||||| ||    |||||||||||||||||| | || |  ||||| ||||||||||||    
T  23291745 gcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 23291844  T
Q  496 ga 497  Q
    ||    
T  23291845 ga 23291846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 5064716 - 5064617
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| |||||||||||| ||| |||||||| | |||||||||||||||    | |||||||||||||||| | || |  ||||| ||||||||||||||    
T  5064716 ttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttga 5064617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 20560926 - 20560979
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||||| |||||||||||||||| ||||||||   |||||||||||||||    
T  20560926 aaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtc 20560979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 3575339 - 3575383
Alignment:
Q  508 tattggatgaaacaaggttttcatgataatcaattgtcatattct 552  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  3575339 tattggatggaacaagtttttcatgatattcaattgtcatattct 3575383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 32337953 - 32337849
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| ||||||||||| |||| ||||||||   |||||||||||||||    |||||||| ||||||||| | || |  ||||| ||||||||    
T  32337953 taaggcttaaatatgtctttcgt-cctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatc 32337855  T
Q  492 atttga 497  Q
    ||||||    
T  32337854 atttga 32337849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 7612931 - 7612882
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||| | ||||||||| ||||||||||||  |||||||||||||||||    
T  7612931 cttaaataggtctttcgtgcctgtaaatataagctatttgaattttcgtc 7612882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 21880748 - 21880646
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||||||||  |||||||  | |||||||||||||||    |||||||||||||||||| | | ||  ||||| |||||| ||||    
T  21880748 ggcttaaataggtctttcgtccctccaaatatatgcaatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaagcatt 21880649  T
Q  495 tga 497  Q
    |||    
T  21880648 tga 21880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 509
Target Start/End: Original strand, 8286929 - 8287046
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| | |||||||||||||| |||||||  | ||||||||||||||||   |||||| |||||||||||||||| |||||||| ||||||||    
T  8286929 taaggcttaaataggtctttcgtccctgcaaatataagccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatc 8287028  T
Q  492 atttgaaaaatggtccta 509  Q
    ||||||||||||||||||    
T  8287029 atttgaaaaatggtccta 8287046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 35731034 - 35730931
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||    
T  35731034 gtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaaaaatagt 35730935  T
Q  506 ccta 509  Q
    ||||    
T  35730934 ccta 35730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 47982020 - 47981918
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||| | || |  ||||| |||||||||||    
T  47982020 ggcttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 47981921  T
Q  495 tga 497  Q
    |||    
T  47981920 tga 47981918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 399 - 506
Target Start/End: Original strand, 32846363 - 32846473
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | ||||||||| | || |||||||| | ||||||||||||||  || |||||| |||||||||||||||| |||||||| ||||||||||||    
T  32846363 gcttaaataggtctttcgtgcttgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcattt 32846462  T
Q  496 gaaaaatggtc 506  Q
    |||||||||||    
T  32846463 gaaaaatggtc 32846473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 50246244 - 50246132
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |  |||||| |||||| ||||||||   ||||||||||||||| |   ||||||||||||||||| | ||||| ||||| |||||||||    
T  50246244 aaggcttaaatagatctttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgtcactgcaaatattaatca 50246145  T
Q  493 tttgaaaaatggt 505  Q
    |||||||||||||    
T  50246144 tttgaaaaatggt 50246132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 54961429 - 54961533
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  54961429 aaggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatca 54961528  T
Q  493 tttga 497  Q
    |||||    
T  54961529 tttga 54961533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 505
Target Start/End: Complemental strand, 37678231 - 37678122
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | |||||||||||||| |||||||  | |||| ||||||||||    |||||||||||||||||| | || || ||||| ||||||||||||    
T  37678231 gcttaaataggtctttcgtccctgcaaatataagccatttaaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcattt 37678132  T
Q  496 gaaaaatggt 505  Q
    ||||||||||    
T  37678131 gaaaaatggt 37678122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 489512 - 489462
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaa 501  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  489512 aagttactaatccttccattttgccattgcaaatattaatcatttgaaaaa 489462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 515304 - 515254
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaa 501  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  515304 aagttactaatccttccattttgccattgcaaatattaatcatttgaaaaa 515254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 505
Target Start/End: Original strand, 27813105 - 27813159
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  27813105 aagttactgatccttccattttgtcattgcaaatactaatcatttgaaaaatggt 27813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 53559773 - 53559669
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||||||||    |||||||||||| ||||| | || |  ||||| |||||||||    
T  53559773 aaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatca 53559674  T
Q  493 tttga 497  Q
    |||||    
T  53559673 tttga 53559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 497
Target Start/End: Original strand, 34238481 - 34238572
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||| ||||||||||| ||||||||||||||||||   ||||||||||||||| || | || |  ||||| ||||||||||||||    
T  34238481 gtctttcgtccttgtaaatataggctatttgaattttcgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttga 34238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 47862536 - 47862434
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||| |   ||||||||||||||| | |||| |  ||||| ||||||||||    
T  47862536 aggcttaaatatgtctttcgtcc-tgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcat 47862438  T
Q  494 ttga 497  Q
    ||||    
T  47862437 ttga 47862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 13872069 - 13872171
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||||||||||    |||||| ||||||||||| | || | |||||| || ||||||||    
T  13872069 ggcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcatt 13872168  T
Q  495 tga 497  Q
    |||    
T  13872169 tga 13872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 13872453 - 13872351
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||| |||    ||||||||||| |||||| | || |  ||||| |||||||||||    
T  13872453 ggcttaaatatgtctttcgtccctgcaaatatagtctatttgaatttttgtccctgaagttactaattcttccaatctgcccctgcaaatattaatcatt 13872354  T
Q  495 tga 497  Q
    |||    
T  13872353 tga 13872351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 8287320 - 8287215
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| | |||||||||||||| |||||||| | |||||||||||||||    |||||||||||||||||| | || || |||||   ||||||    
T  8287320 taaggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatc 8287221  T
Q  492 atttga 497  Q
    ||||||    
T  8287220 atttga 8287215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 45199138 - 45199239
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||| | ||||||| |  || |||||||||||||   ||||||||||||||| || | || || ||||| ||||||||||||||||||||||    
T  45199138 gtctttcgtccccgcaaatataaatcatctgaattttcgtctctgaagttactaatcctttcaatatgacagtgcaaatattaatcatttgaaaaatggt 45199237  T
Q  506 cc 507  Q
    ||    
T  45199238 cc 45199239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 22249731 - 22249835
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||| ||||||||||| |||||||||  |||||||||||||||    ||||||||||||||| || | || |  ||||| |||||||||    
T  22249731 aaggcttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatca 22249830  T
Q  493 tttga 497  Q
    |||||    
T  22249831 tttga 22249835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 497
Target Start/End: Original strand, 47980687 - 47980787
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttg 496  Q
    |||||| | |||||||||||||| |||||||||| |||||||||||||||    |||||||| ||||||||| | | ||  ||||| |||||||||||||    
T  47980687 cttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactgatccttccaatctatccctgcaaatattaatcatttg 47980786  T
Q  497 a 497  Q
    |    
T  47980787 a 47980787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 12691401 - 12691508
Alignment:
Q  393 attaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaa 489  Q
    |||| |||||||| | ||||||||||| || |||||||| | |||||||||||||||    |||||||||||||||||| | ||||  | ||| ||||||    
T  12691401 attatggcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaa 12691500  T
Q  490 tcatttga 497  Q
    ||||||||    
T  12691501 tcatttga 12691508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 506
Target Start/End: Complemental strand, 19917040 - 19916929
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | || ||||||||||| ||||||||   |||| |||||||||||   |||||||||||| || || | || || ||||| |||||||||||    
T  19917040 ggcttaaataggtttttcgtccctgcaaatataggtcatttaaattttcgtctttgaagttactaatcatttcaatctgccactgcaaatattaatcatt 19916941  T
Q  495 tgaaaaatggtc 506  Q
    ||||||||||||    
T  19916940 tgaaaaatggtc 19916929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 20086436 - 20086539
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||| || |||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  20086436 aggcttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 20086535  T
Q  494 ttga 497  Q
    ||||    
T  20086536 ttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 22250118 - 22250015
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| |||||||| | |||||||||||||||    || |||||||| |||||| | || |  ||||| ||||||||||    
T  22250118 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcat 22250019  T
Q  494 ttga 497  Q
    ||||    
T  22250018 ttga 22250015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 33294528 - 33294425
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||| |||||| |||||||| | |||||||||||||||    |||||||||||||||||  | || |  ||||| ||||||||||    
T  33294528 aggcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcat 33294429  T
Q  494 ttga 497  Q
    ||||    
T  33294428 ttga 33294425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 495
Target Start/End: Original strand, 33294131 - 33294244
Alignment:
Q  385 atattataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgca 481  Q
    ||||| |||||| |||||||| |||| ||| |||| || ||||||||  |||||||||||| |||    |||||||||||||||||| |||| |  ||||    
T  33294131 atattttaattacggcttaaatatgttttttgtccatgcaaatataggttatttgaatttttgtccatgaagttactaatccttccaatttgcccctgca 33294230  T
Q  482 attattaatcattt 495  Q
    | ||||||||||||    
T  33294231 aatattaatcattt 33294244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 509
Target Start/End: Original strand, 20600937 - 20601061
Alignment:
Q  388 ttataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaatt 484  Q
    ||||| ||||||| || | | |||||||||||||  ||||||||   |||||||||||||| |   ||||| ||||| |||||| |||| || ||||| |    
T  20600937 ttatatttaaggcatacataggtctttcgtcccttcaaatataggtcatttgaattttcgtttttgaagttgctaattcttccaatttgccactgcaact 20601036  T
Q  485 attaatcatttgaaaaatggtccta 509  Q
    |||||| ||||||||||| ||||||    
T  20601037 attaataatttgaaaaattgtccta 20601061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 48507470 - 48507528
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||| ||||| ||||||||||||||  ||||||| |||||||| |||||||||    
T  48507470 aagttactaacccttctattttgtcattgcacatattaataatttgaaatatggtccta 48507528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 497
Target Start/End: Original strand, 50245869 - 50245959
Alignment:
Q  410 tctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||||||||||||||   |||||||||||| ||    |||||||||||| ||||| | || || ||||| ||||||||||||||    
T  50245869 tctttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 50245959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 27813239 - 27813188
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||| | |||||||||||||| |||||||||  |||||||||||||||    
T  27813239 ggcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtc 27813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 12691791 - 12691687
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||| |||||||||||||||| ||||||||   ||||||||||| |||    |||||||||||||||||| |  | |  ||||| |||||||||    
T  12691791 aagggttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatca 12691692  T
Q  493 tttga 497  Q
    |||||    
T  12691691 tttga 12691687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 10128765 - 10128810
Alignment:
Q  454 ttactaatccttccattttgtcattgcaattattaatcatttgaaa 499  Q
    ||||||||||| |||||||| || | ||||||||||||||||||||    
T  10128765 ttactaatcctcccattttgccactacaattattaatcatttgaaa 10128810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 48507803 - 48507728
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttcca 468  Q
    |||| ||||| | |||||||||||||  ||||||||   ||||||||||||||||   ||||||||||||||||||    
T  48507803 aaggtttaaataggtctttcgtccctacaaatataggtcatttgaattttcgtctctgaagttactaatccttcca 48507728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 53475830 - 53475933
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||| ||  || |||||||||| |||||| ||||| ||    ||||||||||||||| ||  ||| | |||||| ||||||||||    
T  53475830 aggcttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcctttcaaattgcccttgcaaatattaatcat 53475929  T
Q  494 ttga 497  Q
    ||||    
T  53475930 ttga 53475933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 47862152 - 47862254
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | ||||||| |||||| |||||||    ||||||||||||||||   |||||||||||||||||| | || |  ||||| || ||||||||    
T  47862152 ggcttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatt 47862251  T
Q  495 tga 497  Q
    |||    
T  47862252 tga 47862254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 52816525 - 52816419
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||  |||| ||||||||| ||||| |  ||||| ||||| |||   || |||||||||||||||||||| |  || ||||| ||||||    
T  52816525 aaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatca 52816426  T
Q  493 tttgaaa 499  Q
    |||||||    
T  52816425 tttgaaa 52816419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 7e-29; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 9694127 - 9694012
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||||||| || ||||||||   |||||||||||||||    |||||||||||||||||||||||||||||||| ||||||||||    
T  9694127 aggcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcat 9694028  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  9694027 ttgaaaaatggtccta 9694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 409 - 509
Target Start/End: Original strand, 28599438 - 28599541
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    ||||||||||| || |||||||||  ||||||||||||||| |   |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  28599438 gtctttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggt 28599537  T
Q  506 ccta 509  Q
    ||||    
T  28599538 ccta 28599541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 398 - 509
Target Start/End: Complemental strand, 5608978 - 5608864
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||||| ||||||||| || | |||||||||  |||||||||||| |||   ||||||||||||||| ||||||| |||||||| |||||||||||    
T  5608978 ggcttaaacaggtctttcgttccagcaaatatagatcatttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatt 5608879  T
Q  495 tgaaaaatggtccta 509  Q
    |||||||||||||||    
T  5608878 tgaaaaatggtccta 5608864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 43681854 - 43681958
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||    ||||||||||||||| |   ||||||||||| |||||||||| |||||||| |||||||||    
T  43681854 aaggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatca 43681953  T
Q  493 tttga 497  Q
    |||||    
T  43681954 tttga 43681958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 17580328 - 17580430
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt---ctaagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||   | |||||| ||||||||||| |||| |  ||||| |||||||||||    
T  17580328 ggcttaaataggtctttcgtctctgtaaatatagactatttgaattttcgtccccgaagttattaatccttccaatttgcccctgcaaatattaatcatt 17580427  T
Q  495 tga 497  Q
    |||    
T  17580428 tga 17580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 16366961 - 16367065
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||||||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  16366961 aaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 16367060  T
Q  493 tttga 497  Q
    |||||    
T  16367061 tttga 16367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 497
Target Start/End: Complemental strand, 45663906 - 45663790
Alignment:
Q  384 tatattataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgc 480  Q
    |||| |||||| | |||||||| ||||||||||||||||||||||||| | |||||||||||||||    |||||||||||||||| | | || |  |||    
T  45663906 tataatataataatggcttaaatatgtctttcgtccctgtaaatatagtcaatttgaattttcgtccctgaagttactaatccttcaaatctggccctgc 45663807  T
Q  481 aattattaatcatttga 497  Q
    || ||||||||||||||    
T  45663806 aaatattaatcatttga 45663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 19606920 - 19607019
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| ||||||||||||||||||||||||    |||||||||||||||    |||||||||||||||||| | |||| |||||| ||||||||||||||    
T  19606920 ttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcatttga 19607019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 37984746 - 37984841
Alignment:
Q  417 tccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||| ||||||| |  |||||||||||||||||   |||||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||||    
T  37984746 tccctgcaaatatatatcatttgaattttcgtctataaagttactaattcttccattttgccattgtaaatattaattatttgaaaaatggtccta 37984841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 495
Target Start/End: Original strand, 10446832 - 10446932
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| |||||||| | |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||||    
T  10446832 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 10446931  T
Q  495 t 495  Q
    |    
T  10446932 t 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 22731918 - 22731814
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||||||||    ||||||||| ||||| || | ||||  ||||| |||||||||    
T  22731918 aaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccgtgaagttactattcctttcaatctgtccctgcaaatattaatca 22731819  T
Q  493 tttga 497  Q
    |||||    
T  22731818 tttga 22731814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 509
Target Start/End: Complemental strand, 18477257 - 18477146
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| |||| ||||||||||| |||||||  | |||| |||||||||| |   ||||||||||| |||||||||| ||||| |  |||||||||||| |    
T  18477257 ttaaatatgtatttcgtccctgcaaatataagccatttaaattttcgtccatgaagttactaatcattccattttgccattgaagatattaatcatttca 18477158  T
Q  498 aaaatggtccta 509  Q
    ||||||||||||    
T  18477157 aaaatggtccta 18477146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 22309816 - 22309701
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||| |||||| ||||||||   |||||||||||||||    |||||||||||  ||||| | || || ||||| ||||||||||    
T  22309816 aggcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaattgttccaatctgacactgcaaatattaatcat 22309717  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  22309716 ttgaaaaatggtccta 22309701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 16367338 - 16367245
Alignment:
Q  407 atgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||||| |||||||| | |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||||||    
T  16367338 atgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 16367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 20911128 - 20911232
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  20911128 aaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 20911227  T
Q  493 tttga 497  Q
    |||||    
T  20911228 tttga 20911232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 20911513 - 20911412
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||||||||||||   ||||||||||| |||    |||||||||||| ||||| | ||||  ||||| |||||||||||    
T  20911513 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcattccaatctgtc-ctgcaaatattaatcatt 20911415  T
Q  495 tga 497  Q
    |||    
T  20911414 tga 20911412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 505
Target Start/End: Original strand, 4375612 - 4375659
Alignment:
Q  458 taatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  4375612 taatccttccattttgccatagcaaatattaatcatttgaaaaatggt 4375659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 509
Target Start/End: Original strand, 17284740 - 17284849
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| | || ||||||||||| ||||||||   |||||||||||||| |   ||||||||||||||||        ||||| || ||||||||    
T  17284740 taaggcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtatctgaagttactaatccttc--------cattgaaaatattaatc 17284831  T
Q  492 atttgaaaaatggtccta 509  Q
    ||||||||||||||||||    
T  17284832 atttgaaaaatggtccta 17284849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 22309429 - 22309533
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| ||||||||   ||||||||||| |||    |||||||||||||||||| | || || ||||  |||||||||    
T  22309429 aaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttagtcaatgaagttactaatccttccaatctgccactgcacatattaatca 22309528  T
Q  493 tttga 497  Q
    |||||    
T  22309529 tttga 22309533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 41846757 - 41846668
Alignment:
Q  417 tccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatg 503  Q
    ||||| ||||||||| | ||||||||||||||  || ||||||||| |||||||| | || || ||||| ||||||||||||||||||||    
T  41846757 tccctataaatataggccatttgaattttcgttcctgaagttactactccttccaatctgccactgcaaatattaatcatttgaaaaatg 41846668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 32519541 - 32519437
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||    ||||||||||||||  || ||||||||||||||| || | || |  ||||| |||||||||    
T  32519541 aaggcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatca 32519442  T
Q  493 tttga 497  Q
    |||||    
T  32519441 tttga 32519437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 43682176 - 43682127
Alignment:
Q  460 atccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    ||||||||||||||  |||| || ||||||||||||||||||||||||||    
T  43682176 atccttccattttgctattgtaaatattaatcatttgaaaaatggtccta 43682127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 1149933 - 1150039
Alignment:
Q  394 ttaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaat 490  Q
    |||||||||||| | || ||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| |  | |  ||||| |||||||    
T  1149933 ttaaggcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaat 1150032  T
Q  491 catttga 497  Q
    |||||||    
T  1150033 catttga 1150039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 28599811 - 28599709
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | ||||||| ||||||||||||||    ||||||||||||||||   ||||||| |||||||||| | || ||||||||   |||||||||    
T  28599811 ggcttaaataggtctttcatccctgtaaatataagtcatttgaattttcgtctctgaagttacaaatccttccaatctgccattgcaaaatttaatcatt 28599712  T
Q  495 tga 497  Q
    |||    
T  28599711 tga 28599709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 32519155 - 32519257
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| ||||||||   |||||||||||||||    || ||||||||||||||| | ||    ||||| |||||||||||    
T  32519155 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatt 32519254  T
Q  495 tga 497  Q
    |||    
T  32519255 tga 32519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 17366817 - 17366766
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||| ||||||||||||| || |||||||| | |||||||||||||||    
T  17366817 ggcttaaatatgtctttcgtccttgcaaatatagtccatttgaattttcgtc 17366766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 28599618 - 28599567
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||| | |||||||| ||||| |||||||||| |||||||||||||||    
T  28599618 ggcttaaataggtctttcgcccctgcaaatatagaccatttgaattttcgtc 28599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 45663700 - 45663751
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt 448  Q
    ||||||||| |||||||||||||||| ||||||||   ||||||||||||||    
T  45663700 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgt 45663751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 1150323 - 1150219
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||||| |||| ||||||||   |||||||||||||||    || |||||||||||| || | || |  ||||| |||||||||    
T  1150323 aaggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatca 1150224  T
Q  493 tttga 497  Q
    |||||    
T  1150223 tttga 1150219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 506
Target Start/End: Complemental strand, 9959198 - 9959098
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||| |||||| |   ||||||||||| ||| |   |||||||||||||| || | || || | ||| ||||||||||||||||||||||    
T  9959198 gtctttcgtccctgcaaatattggtcatttgaattttggtccatgaagttactaatcctttcaatctgccactacaaatattaatcatttgaaaaatggt 9959099  T
Q  506 c 506  Q
    |    
T  9959098 c 9959098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 490
Target Start/End: Complemental strand, 17580711 - 17580613
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaatttt-cgtct---aagttactaatccttccattttgtcattgcaattattaat 490  Q
    |||||||||| |||||||||||||||  ||||||||   ||||||||||| ||||    |||||||||||||||||| | || || ||||| |||||||    
T  17580711 aaggcttaaatatgtctttcgtccctacaaatataggtcatttgaatttttcgtccctaaagttactaatccttccaatatgccactgcaaatattaat 17580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 19620834 - 19620790
Alignment:
Q  454 ttactaatccttccattttgtcattgcaattattaatcatttgaa 498  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||    
T  19620834 ttactaatccttccattttgcccctgcaaatattaatcatttgaa 19620790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 506
Target Start/End: Complemental strand, 35312362 - 35312249
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | ||||||||| ||||||||||||   ||||||||||||||||     ||||||||||||||||||||||||||||||| |||||||||    
T  35312362 aaggcttaaataagtctttcgttcctgtaaatatatcttatttgaattttcgtccttggagttactaatccttccattttgtcattgcaaatattaatca 35312263  T
Q  493 tttgaaaaatggtc 506  Q
    ||||||||||||||    
T  35312262 tttgaaaaatggtc 35312249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 509
Target Start/End: Original strand, 48380671 - 48380795
Alignment:
Q  388 ttataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaatt 484  Q
    |||||||||||||||||| | ||||||||||| |||||||||||   |||||||||||||||    |||||||||||||||||| | || || |||||      
T  48380671 ttataattaaggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaa 48380770  T
Q  485 attaatcatttgaaaaatggtccta 509  Q
    |||||||||||||||||||||||||    
T  48380771 attaatcatttgaaaaatggtccta 48380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 24701655 - 24701539
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | ||||||| |||||| |||||||  | |||||||||||||||    ||||||||||||||||||||||| |||| ||| |||||| ||    
T  24701655 aaggcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaacca 24701556  T
Q  493 tttgaaaaatggtccta 509  Q
    |||||||||||||||||    
T  24701555 tttgaaaaatggtccta 24701539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 30830475 - 30830401
Alignment:
Q  435 atttgaattttcgtctaagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||    
T  30830475 atttgaattttcgtccaagttactaatcattccattttgccattgcaaatattaatcatttgaaatatggtccta 30830401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 10019701 - 10019646
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  10019701 aagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtc 10019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 12577007 - 12577112
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||   |||||||||||| || || | || |  ||||| ||||||||    
T  12577007 taaggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtctatgaagttactaatcatttcaatctgcccctgcaaatattaatc 12577106  T
Q  492 atttga 497  Q
    ||||||    
T  12577107 atttga 12577112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 37152921 - 37152820
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| |||||||||||||||| |||||||| | ||||||||||||||||   |||||||||||||||||| | || |  ||||| ||||||||||||    
T  37152921 gcttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 37152822  T
Q  496 ga 497  Q
    ||    
T  37152821 ga 37152820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 1047590 - 1047486
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||| |||||||||||||||   ||||||||||||||||   |||||||||||||||||| | || |  ||||| |||||||||    
T  1047590 aaggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatca 1047491  T
Q  493 tttga 497  Q
    |||||    
T  1047490 tttga 1047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 26953100 - 26953203
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||    ||||||||||||||| || | || |  ||||| ||||||||||    
T  26953100 aggcttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcat 26953199  T
Q  494 ttga 497  Q
    ||||    
T  26953200 ttga 26953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 46545096 - 46545001
Alignment:
Q  417 tccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||||||||   ||||||| |||||||    ||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  46545096 tccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaaaatagtccta 46545001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 49990180 - 49990109
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttc 466  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||||| |||||||||    
T  49990180 ggcttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctttgaagttattaatccttc 49990109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 739217 - 739321
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | || ||||||||||| |||||||||| |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  739217 aaggcttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatca 739316  T
Q  493 tttga 497  Q
    |||||    
T  739317 tttga 739321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 497
Target Start/End: Complemental strand, 49003272 - 49003157
Alignment:
Q  384 tatattataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgc 480  Q
    ||||||||| |||||||||||| | |||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  |||    
T  49003272 tatattata-ttaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgc 49003174  T
Q  481 aattattaatcatttga 497  Q
    || ||||||||||||||    
T  49003173 aaatattaatcatttga 49003157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 25414843 - 25414946
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||  |||||||| | |||||||||||| |||   |||||||||||||||||| | || |  ||||| ||||||||||    
T  25414843 aggcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcat 25414942  T
Q  494 ttga 497  Q
    ||||    
T  25414943 ttga 25414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 2953464 - 2953566
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||||||||||||   |||||||||||||||    ||||||||||||||| || | || |  ||||| |||||||||||    
T  2953464 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcatt 2953563  T
Q  495 tga 497  Q
    |||    
T  2953564 tga 2953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 2953848 - 2953746
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||||    
T  2953848 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 2953749  T
Q  495 tga 497  Q
    |||    
T  2953748 tga 2953746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 503
Target Start/End: Complemental strand, 8890595 - 8890485
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| ||||||||   |||||||| |||||| |   ||| ||||||| ||||| | ||||| ||||| |||||||||    
T  8890595 aaggcttaaataggtctttcgtccctgcaaatataggtcatttgaatattcgtccatgaagtgactaatcattccaatatgtcactgcaaatattaatca 8890496  T
Q  493 tttgaaaaatg 503  Q
    |||||||||||    
T  8890495 tttgaaaaatg 8890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 6056373 - 6056478
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| |||||||||||||||| ||||||||   |||||||||||||||    || ||||| ||||||||| | ||||  ||||| ||||||||    
T  6056373 taaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatc 6056472  T
Q  492 atttga 497  Q
    ||||||    
T  6056473 atttga 6056478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 33030333 - 33030448
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||| ||||||| ||||||||   |||||||||||||||    ||||||||||| |||||| | || || ||||| ||| ||||||    
T  33030333 aggcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcat 33030432  T
Q  494 ttgaaaaatggtccta 509  Q
    |||||||||| |||||    
T  33030433 ttgaaaaatgatccta 33030448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 33347789 - 33347698
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || | |||||| ||||||||||||||    
T  33347789 gtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 33347698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 49002879 - 49002978
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 49002978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 5183890 - 5183788
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||| ||||||| |||||||| | |||||||||||||||    ||||||| |||||||||| |||| |  ||||| |||||||||||    
T  5183890 ggcttaaatacgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatt 5183791  T
Q  495 tga 497  Q
    |||    
T  5183790 tga 5183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 6334655 - 6334757
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||| |||||| |||||||||| ||||||||||||||     |||||||||||||||||  | || || ||||| ||||||||||    
T  6334655 aggcttaaataagtctttcatccctgcaaatatagaccatttgaattttcgttgttaaagttactaatccttccgatctgccactgcaaatattaatcat 6334754  T
Q  494 ttg 496  Q
    |||    
T  6334755 ttg 6334757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 29043139 - 29043037
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||| ||| |||||||| | |||||||||||||||    ||||||||||||||| || | || |  ||||| |||||||||||    
T  29043139 ggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 29043040  T
Q  495 tga 497  Q
    |||    
T  29043039 tga 29043037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 46850042 - 46849940
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||||||||| ||||||||   |||||||||||||||    |||||||| ||||||||| |||| |  ||||| |||||||||||    
T  46850042 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatt 46849943  T
Q  495 tga 497  Q
    |||    
T  46849942 tga 46849940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 5183507 - 5183608
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| ||||||||||| |||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||||    
T  5183507 gcttaaatatgtctttcgttcctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcattt 5183606  T
Q  496 ga 497  Q
    ||    
T  5183607 ga 5183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 6056763 - 6056660
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc----taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    |||||||| |||||||||||||||| |||||||  | |||||||||||| ||    |||||||||||||||| || | || |  ||||| ||||||||||    
T  6056763 ggcttaaatatgtctttcgtccctgcaaatataagccatttgaattttcatccctgtaagttactaatcctttcaatctgcccctgcaaatattaatcat 6056664  T
Q  494 ttga 497  Q
    ||||    
T  6056663 ttga 6056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 29042754 - 29042857
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||| |||||||||||||| |||||||||| | |||||| ||||||||    |||||| ||||||||||| | ||||  ||||| |||||||||    
T  29042754 aaggtttaaatatgtctttcgtccc-gtaaatataggccatttgatttttcgtcgcggaagttattaatccttccaatctgtccctgcaaatattaatca 29042852  T
Q  493 tttga 497  Q
    |||||    
T  29042853 tttga 29042857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 35311972 - 35312076
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||| | ||||||||||||| |||||||||   |||||||||||||||    |||||||||||| ||||| | |||||||||||   |||||||    
T  35311972 aaggtttaaataggtctttcgtccctataaatataggtcatttgaattttcgtcactgaagttactaatcattccaatctgtcattgcaaaatttaatca 35312071  T
Q  493 tttga 497  Q
    |||||    
T  35312072 tttga 35312076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 1040297 - 1040400
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| || |||||||  | ||||||||||| |||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  1040297 aggcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 1040396  T
Q  494 ttga 497  Q
    ||||    
T  1040397 ttga 1040400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 1047203 - 1047306
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| || |||||||  | ||||||||||| |||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  1047203 aggcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 1047302  T
Q  494 ttga 497  Q
    ||||    
T  1047303 ttga 1047306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 5926905 - 5926857
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttc 446  Q
    |||||||| | |||||||||||||| |||||||||| ||||||||||||    
T  5926905 ggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttc 5926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 46364573 - 46364625
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    ||||||||| |||||||||||||||| ||||||||   |||||||||||||||    
T  46364573 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtc 46364625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 5926528 - 5926621
Alignment:
Q  407 atgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  |||||  |||||||||||||    
T  5926528 atgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttga 5926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 29981021 - 29980920
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | ||||||||||  || ||||||||   |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||||||    
T  29981021 gcttaaataggtctttcgtctttgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcattt 29980922  T
Q  496 ga 497  Q
    ||    
T  29980921 ga 29980920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 52455083 - 52455028
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    |||||| ||||||||||| | || || ||||| |||||||||||||||||||||||    
T  52455083 aagttattaatccttccaatctgccactgcaactattaatcatttgaaaaatggtc 52455028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 24701263 - 24701343
Alignment:
Q  391 taattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttcca 468  Q
    |||| |||||||||| | |||||||||| ||| ||||||||   |||||||||||||||    ||||||||||||||||||    
T  24701263 taataaaggcttaaataagtctttcgtctctgcaaatatagctcatttgaattttcgtccctgaagttactaatccttcca 24701343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 33030720 - 33030617
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | ||||||||| |||| |||||||||  |||||||||||||||    || |||||||||||| || | || || ||||| |||||||||    
T  33030720 aaggcttaaata-gtctttcgttcctgcaaatatagatcatttgaattttcgtccatgaaattactaatcctttcaatctgccactgcaaatattaatca 33030622  T
Q  493 tttga 497  Q
    |||||    
T  33030621 tttga 33030617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 29980642 - 29980741
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| ||||||||||||| |||||||||||   ||||||||||||| |    |||||||||||| ||||| | || |  ||||| ||||||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttga 29980741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 48381068 - 48380965
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||||||||||||||||||    |||| ||||||||||    |||||| ||||||||||| | || |  ||||| ||||||||||    
T  48381068 aggcttaaataagtctttcgtccctgtaaatataattcatttaaattttcgtccttaaagttattaatccttccaatctgccgctgcaaatattaatcat 48380969  T
Q  494 ttga 497  Q
    ||||    
T  48380968 ttga 48380965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 445
Target Start/End: Original strand, 35312180 - 35312216
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaatttt 445  Q
    |||||||||||||| |||||||||| |||||||||||    
T  35312180 gtctttcgtccctgcaaatatagaccatttgaatttt 35312216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 390 - 509
Target Start/End: Complemental strand, 22024262 - 22024140
Alignment:
Q  390 ataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattat 486  Q
    |||| ||||||||||| | |||||||||| ||| ||||||||   |||||||||||||||   ||||||||||||||||||| |||| || ||||| |||    
T  22024262 ataaataaggcttaaatacgtctttcgtctctgcaaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatat 22024163  T
Q  487 taatcatttgaaaaatggtccta 509  Q
    |||||||||||||||||||||||    
T  22024162 taatcatttgaaaaatggtccta 22024140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 410 - 503
Target Start/End: Original strand, 21260877 - 21260973
Alignment:
Q  410 tctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatg 503  Q
    ||||||||||||| ||||||||   |||||||||||||||    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  21260877 tctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatg 21260973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 509
Target Start/End: Complemental strand, 41339751 - 41339623
Alignment:
Q  384 tatattataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgc 480  Q
    |||| |||||||| | |||||| ||||| ||||| | |||||||||||   ||||||||||||||| |   ||||||||||| |||||||||| ||| ||    
T  41339751 tataatataattatgacttaaatatgtcattcgttcttgtaaatataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgc 41339652  T
Q  481 aattattaatcatttgaaaaatggtccta 509  Q
    || ||||||||||||||||||||||||||    
T  41339651 aaatattaatcatttgaaaaatggtccta 41339623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 22533760 - 22533660
Alignment:
Q  412 tttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtcct 508  Q
    ||||||||||| ||||||||   |||||||||||||||    |||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||    
T  22533760 tttcgtccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttgaaaaatggtcct 22533661  T
Q  509 a 509  Q
    |    
T  22533660 a 22533660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 506
Target Start/End: Original strand, 34404483 - 34404594
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||||| |||| ||||||||   |||||||||||||||    ||||||||||||||||||||| | |||||||| ||||||||||    
T  34404483 aggcttaaataggtctttcgttcctgcaaatataggtcatttgaattttcgtcactgaagttactaatccttccatttgg-cattgcaaatattaatcat 34404581  T
Q  494 ttgaaaaatggtc 506  Q
    |||||||||||||    
T  34404582 ttgaaaaatggtc 34404594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 506
Target Start/End: Original strand, 18934714 - 18934824
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| ||||||||| |||||| |||||||    ||||||||||||||| |   |||||||||||||| ||||||| |||||||| ||||| ||||||    
T  18934714 gcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcattt 18934813  T
Q  496 gaaaaatggtc 506  Q
    |||||||||||    
T  18934814 gaaaaatggtc 18934824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 8323440 - 8323338
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||| ||||| |||||||  |||||||||||||||||    ||||||||||| ||| ||||||| |||||||| |||||||||||    
T  8323440 ggcttaaataggtctttcgcccctgcaaatatatgctatttgaattttcgtccttgaagttactaattctttcattttgccattgcaaatattaatcatt 8323341  T
Q  495 tga 497  Q
    |||    
T  8323340 tga 8323338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 32052612 - 32052506
Alignment:
Q  394 ttaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaat 490  Q
    |||||||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||    
T  32052612 ttaaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 32052513  T
Q  491 catttga 497  Q
    |||||||    
T  32052512 catttga 32052506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 409 - 503
Target Start/End: Original strand, 8323067 - 8323164
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatttgaaaaatg 503  Q
    ||||||| ||||| |||||||||   ||||||||||||||| |   |||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  8323067 gtctttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatttgaaaaatg 8323164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 25253471 - 25253368
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || | |||||| || |||||||    
T  25253471 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcat 25253372  T
Q  494 ttga 497  Q
    ||||    
T  25253371 ttga 25253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 25317262 - 25317159
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || | |||||| || |||||||    
T  25317262 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcat 25317163  T
Q  494 ttga 497  Q
    ||||    
T  25317162 ttga 25317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 37944993 - 37945096
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||||||| |||||||||||   |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||||    
T  37944993 aggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcat 37945092  T
Q  494 ttga 497  Q
    ||||    
T  37945093 ttga 37945096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 13064793 - 13064691
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| |||||||    ||||||||||||||||   |||||||||||||||||| | || |  ||||| |||||||||||    
T  13064793 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcatt 13064694  T
Q  495 tga 497  Q
    |||    
T  13064693 tga 13064691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 509
Target Start/End: Complemental strand, 16118335 - 16118221
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | ||||||| |||||| |||||||  |  ||||||||||||||    ||| |||||||| |||||||| | |||||||| |||| ||||||    
T  16118335 ggcttaaataggtctttcatccctgcaaatataagccgtttgaattttcgtccctaaagatactaatctttccatttcgccattgcaaatattcatcatt 16118236  T
Q  495 tgaaaaatggtccta 509  Q
    |||||||||||||||    
T  16118235 tgaaaaatggtccta 16118221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 14745688 - 14745595
Alignment:
Q  407 atgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||||  |||||||| | |||||||||||||||    |||||||||||||||||| | || | |||||| ||||||||||||||    
T  14745688 atgtctttcgtccctacaaatataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 14745595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 25253087 - 25253188
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| ||||||||| |||||| ||||||||   |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T
Q  496 ga 497  Q
    ||    
T  25253187 ga 25253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 25316877 - 25316978
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| ||||||||| |||||| ||||||||   |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T
Q  496 ga 497  Q
    ||    
T  25316977 ga 25316978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 33735699 - 33735595
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  33735699 aaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 33735600  T
Q  493 tttga 497  Q
    |||||    
T  33735599 tttga 33735595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 7015507 - 7015610
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||| |||||||| | |||||||||||| ||    |||||||||||| ||||| | || || ||||| ||||||||||    
T  7015507 aggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcat 7015606  T
Q  494 ttga 497  Q
    ||||    
T  7015607 ttga 7015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 32052223 - 32052326
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||| ||||||||||||||||||||   |||||||||||||||    |||||||||||||||||| |  | |  ||||| ||||||||||    
T  32052223 aggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcat 32052322  T
Q  494 ttga 497  Q
    ||||    
T  32052323 ttga 32052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 33735312 - 33735415
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||  |||||||| | |||||| ||||||||    || ||||||||||||||| | ||||  ||||| ||||||||||    
T  33735312 aggcttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcat 33735411  T
Q  494 ttga 497  Q
    ||||    
T  33735412 ttga 33735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 509
Target Start/End: Complemental strand, 7015893 - 7015779
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | ||||||||||| || |||||||     ||||||||||||||    |||||||||||||||||| | || || ||||| |||||||||||    
T  7015893 ggcttaaataggtctttcgtccttgcaaatataagtcgtttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatt 7015794  T
Q  495 tgaaaaatggtccta 509  Q
    |||||||| ||||||    
T  7015793 tgaaaaatagtccta 7015779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 12991172 - 12991070
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||||||||||||||| |||||||    ||||||||||||||||   |||||||||||||||||| | |  |  ||||| |||||||||||    
T  12991172 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcatt 12991073  T
Q  495 tga 497  Q
    |||    
T  12991072 tga 12991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 17968617 - 17968669
Alignment:
Q  454 ttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    ||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  17968617 ttactaatcatttcattttgtcattgcaaatgttaatcatttgaaaaatggtc 17968669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 509
Target Start/End: Complemental strand, 27753827 - 27753749
Alignment:
Q  434 tatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    ||||||||||||||| |   |||||||||||||||||| | || || ||||| ||||||||||||||||||| ||||||    
T  27753827 tatttgaattttcgtttctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatagtccta 27753749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 37945380 - 37945276
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| |||||||||||||||| ||||||||  |  |||||||||||||    ||||||||||||||| || | || | |||||| ||||||||    
T  37945380 taaggcttaaatatgtctttcgtccctgcaaatatag-gtcattgaattttcgtccctgaagttactaatcctttcaatctgcccttgcaaatattaatc 37945282  T
Q  492 atttga 497  Q
    ||||||    
T  37945281 atttga 37945276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 8654106 - 8654221
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtctaag---ttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||| |||| ||||||||| |||||   |||||| ||||| || | |   ||||||||||| ||||||||||  |||||||| |||||||    
T  8654106 aggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatcat 8654205  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||| | ||||||    
T  8654206 ttgaaaattcgtccta 8654221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 14745447 - 14745550
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||| ||||||||   |||||||||||| ||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  14745447 aggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 14745546  T
Q  494 ttga 497  Q
    ||||    
T  14745547 ttga 14745550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 41339549 - 41339598
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||| |||||||||||||||| |||||||||  |||||||||||||||    
T  41339549 cttaaatatgtctttcgtccctgcaaatatagatcatttgaattttcgtc 41339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 27753672 - 27753723
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||| |||||||||||||||| ||||||||   |||||||||||||||    
T  27753672 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtc 27753723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 9915431 - 9915484
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta 451  Q
    |||||||| | ||||||||||||| |||||||||   |||||||||||||||||    
T  9915431 ggcttaaataggtctttcgtccctataaatataggtcatttgaattttcgtcta 9915484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 16118144 - 16118211
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatc 462  Q
    |||||||| | |||||||||||||| ||||||||   ||||||||||||||||   ||||||||||||    
T  16118144 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtctctaaagttactaatc 16118211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 506
Target Start/End: Complemental strand, 11243 - 11130
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||||| |||||||||||||||||||||||   |||||||||||||||    |||||| |||| ||||||||||| |||||||| |||||||||    
T  11243 aagggttaaacaggtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatca 11144  T
Q  493 tttgaaaaatggtc 506  Q
    ||||||||||||||    
T  11143 tttgaaaaatggtc 11130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 497
Target Start/End: Original strand, 10853 - 10955
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||||||||| ||||||||   ||||||||||||||| |   |||||||||||||||||||||| |||||||| |||||||||||    
T  10853 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatt 10952  T
Q  495 tga 497  Q
    |||    
T  10953 tga 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 506
Target Start/End: Original strand, 27557846 - 27557959
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||||| |||||||||||||||||||||||   |||||||||||||||    |||||| |||| ||||||||||| |||||||| |||||||||    
T  27557846 aagggttaaacaggtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatca 27557945  T
Q  493 tttgaaaaatggtc 506  Q
    ||||||||||||||    
T  27557946 tttgaaaaatggtc 27557959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 27558236 - 27558134
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||||||||||| ||||||||   ||||||||||||||| |   |||||||||||||||||||||| |||||||| |||||||||||    
T  27558236 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatt 27558137  T
Q  495 tga 497  Q
    |||    
T  27558136 tga 27558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 37563740 - 37563636
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||     
T  37563740 aaggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatct 37563641  T
Q  493 tttga 497  Q
    |||||    
T  37563640 tttga 37563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 509
Target Start/End: Original strand, 5636041 - 5636139
Alignment:
Q  413 ttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||| ||||||||   |||||||||||||||    ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  5636041 ttcgtccctgcaaatataggtcatttgaattttcgtccctaaagttactaatccttccattt-gccattgcaaatattaatcatttgaaaaatggtccta 5636139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 509
Target Start/End: Complemental strand, 5280667 - 5280541
Alignment:
Q  386 tattataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaa 482  Q
    ||||| ||||| |||||||| | |||||| |||| || ||||||||   |||||||||||||||    |||||||||||||||  | | |||||||||||    
T  5280667 tattaaaattatggcttaaataggtcttttgtccttgcaaatataggtcatttgaattttcgtccctgaagttactaatcctttgaatctgtcattgcaa 5280568  T
Q  483 ttattaatcatttgaaaaatggtccta 509  Q
     ||||||||||||||||||||||||||    
T  5280567 atattaatcatttgaaaaatggtccta 5280541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 34454479 - 34454586
Alignment:
Q  393 attaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaa 489  Q
    ||||||||||||| ||||| |||||||||| ||||||||   ||||||||||||||||   |||||||||||||||||| | |  |  ||||| ||||||    
T  34454479 attaaggcttaaatatgtccttcgtccctgcaaatataggtcatttgaattttcgtctttgaagttactaatccttccaatctacccctgcaaatattaa 34454578  T
Q  490 tcatttga 497  Q
    ||||||||    
T  34454579 tcatttga 34454586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 503
Target Start/End: Complemental strand, 47082212 - 47082123
Alignment:
Q  412 tttcgtccctgtaaatatagactatttgaattttcgtctaagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatg 503  Q
    |||||||| || |||||||||| |||||||||||||||  |||||||||||||| || | || || | ||| ||||||||||||||||||||    
T  47082212 tttcgtccatgaaaatatagaccatttgaattttcgtc--agttactaatcctttcaatctgccactacaaatattaatcatttgaaaaatg 47082123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 19980006 - 19980061
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    |||||||||||| |||||||||| | |||||| |||||||||||||||||||||||    
T  19980006 aagttactaatcattccattttgccgttgcaaatattaatcatttgaaaaatggtc 19980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 506
Target Start/End: Original strand, 20947187 - 20947304
Alignment:
Q  392 aattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattatta 488  Q
    |||| ||| ||||| | |||||||||||||  ||||||||   ||||||||||||||| |   ||||||||||||||||| | || || | ||| |||||    
T  20947187 aatttaggtttaaataggtctttcgtcccttcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccactacaaatatta 20947286  T
Q  489 atcatttgaaaaatggtc 506  Q
    ||||||||||||||||||    
T  20947287 atcatttgaaaaatggtc 20947304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 44545942 - 44545865
Alignment:
Q  435 atttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||||||||    |||||||||||||||| |||||  |||||||| |||||||||||| |||||||||||||    
T  44545942 atttgaattttcgtccctgaagttactaatccttcaattttaccattgcaaatattaatcattttaaaaatggtccta 44545865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 26825628 - 26825732
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||||||||||||   |||||||||||||||    |||||||||||| ||||| | || |  |||||  ||||||||    
T  26825628 aaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatca 26825727  T
Q  493 tttga 497  Q
    |||||    
T  26825728 tttga 26825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 5280271 - 5280375
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||| |||||||| | ||||||||||||||  || |||||||||||||||||| | || || || || ||||||| ||    
T  5280271 aggcttaaataagtctttcgtccctgcaaatataggccatttgaattttcgttactgaagttactaatccttccaatctgccactgtaaatattaataat 5280370  T
Q  494 ttgaa 498  Q
    |||||    
T  5280371 ttgaa 5280375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 43937893 - 43937996
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| |||||||||||   |||||||||||| ||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  43937893 aggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 43937992  T
Q  494 ttga 497  Q
    ||||    
T  43937993 ttga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 43938279 - 43938176
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| ||||||||||||| || |||||||  | |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||    
T  43938279 aggcttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 43938180  T
Q  494 ttga 497  Q
    ||||    
T  43938179 ttga 43938176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 15827914 - 15827965
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||| |||||||||||||||| |||||||| | |||||||||||||||    
T  15827914 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtc 15827965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 7159314 - 7159210
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||| ||| |||||| |||||||||  ||||||||||||||  || |||||||||||||| |||||||  |  ||||| |||||||||    
T  7159314 aaggcttaaatatgtcattcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccatttt-accctgcaaatattaatca 7159216  T
Q  493 tttgaa 498  Q
    ||||||    
T  7159215 tttgaa 7159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 12928035 - 12928138
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||| ||| |||||||| | | |||||||||||||    |||||||||||||||||| | || || ||||  |||||||||    
T  12928035 aaggcttaaatatgtctttcgtcgctgcaaatataggccacttgaattttcgtccctaaagttactaatccttccaatctgcca-tgcatatattaatca 12928133  T
Q  493 tttga 497  Q
    |||||    
T  12928134 tttga 12928138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 47121342 - 47121392
Alignment:
Q  459 aatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  47121342 aatccttccattttcccattgcaaatattaattatttgaaaaatggtccta 47121392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 37563353 - 37563456
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||| ||||||| |||||||| | |||||||||||||||    || ||||||||||||| | | || |  ||||| ||||||||||    
T  37563353 aggcttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcat 37563452  T
Q  494 ttga 497  Q
    ||||    
T  37563453 ttga 37563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 26830069 - 26830025
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||    
T  26830069 aagttactaatccttccattttgccactgcaaatattaatcattt 26830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 12928422 - 12928353
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatcctt 465  Q
    ||||||| | |||||| ||||||| |||||||||| |||||||||||||||    |||||||||||||||    
T  12928422 gcttaaataggtcttttgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatcctt 12928353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 12931113 - 12931020
Alignment:
Q  407 atgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||||| |||||| |   |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||||||    
T  12931113 atgtctttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttga 12931020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 40022570 - 40022527
Alignment:
Q  454 ttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||    
T  40022570 ttactaatccttccattttgtcactgcaaatattaagcatttga 40022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 47121661 - 47121610
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct 450  Q
    ||||||| | |||||||||||||| |||||| ||| ||||||||||||||||    
T  47121661 gcttaaataggtctttcgtccctgcaaatattgaccatttgaattttcgtct 47121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 47081845 - 47081949
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||  |||||||    |||||||||||| |||   ||||||||||||||| || | || ||||| || |||||||||    
T  47081845 aaggcttaaataggtctttcgtcccttcaaatatatgtcatttgaattttcatctctgaagttactaatcctttcaatctgccattgtaaatattaatca 47081944  T
Q  493 tttga 497  Q
    |||||    
T  47081945 tttga 47081949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 12929639 - 12929536
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| |||||| |   |||||||||| ||||    |||| ||||||||||||| | || |  ||||| ||||||||||    
T  12929639 aggcttaaatatgtctttcgtccctgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcat 12929540  T
Q  494 ttga 497  Q
    ||||    
T  12929539 ttga 12929536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 15828036 - 15827991
Alignment:
Q  464 ttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    ||||| |||| || ||||| ||||||||||||||||||||||||||    
T  15828036 ttccaatttgccactgcaaatattaatcatttgaaaaatggtccta 15827991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 399 - 509
Target Start/End: Complemental strand, 21255914 - 21255801
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | ||||||||| |||| |||||||||  ||||||||||||||| |   |||||||||| ||||||||||| ||||| || ||||||||||||    
T  21255914 gcttaaataagtctttcgttcctgcaaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcattt 21255815  T
Q  496 gaaaaatggtccta 509  Q
    ||||||||||||||    
T  21255814 gaaaaatggtccta 21255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 38643042 - 38642930
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtctaagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    |||||||||| | || ||||||| ||| |||||||||  |||||||||||||| | ||||| |||| ||||||||||| |||||||| ||||||||||||    
T  38643042 aaggcttaaataggtgtttcgtctctgcaaatatagatcatttgaattttcgt-tcagttattaattcttccattttgccattgcaaatattaatcattt 38642944  T
Q  496 gaaaaatggtccta 509  Q
    ||||||| ||||||    
T  38642943 gaaaaatagtccta 38642930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 509
Target Start/End: Original strand, 30890221 - 30890321
Alignment:
Q  412 tttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtcct 508  Q
    |||||||||| ||||||||||  |||||||||||| |||   |||||||||||| ||| |||||| ||||| || |||||||||||||||||||||||||    
T  30890221 tttcgtccctataaatatagatcatttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaaaaatggtcct 30890320  T
Q  509 a 509  Q
    |    
T  30890321 a 30890321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 451 - 509
Target Start/End: Complemental strand, 28310676 - 28310618
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  28310676 aagttactaatctttccattttgccattgcaaatattaatcatttgaaaaatggtccta 28310618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 1741386 - 1741489
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||||| | || | |||||| ||||||||||    
T  1741386 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcat 1741485  T
Q  494 ttga 497  Q
    ||||    
T  1741486 ttga 1741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 22129005 - 22129108
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||| |||| |||||||||| |||||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||||||||    
T  22129005 aggcttaaataggtctttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatcat 22129104  T
Q  494 ttga 497  Q
    ||||    
T  22129105 ttga 22129108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 46670618 - 46670528
Alignment:
Q  419 cctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    |||||||||||||   |||||||||||| ||    ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  46670618 cctgtaaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaaaaaatggtc 46670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 30803848 - 30803960
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttg 496  Q
    |||||| | |||||||||||||  || |||||   ||||||||||||||||   ||||||||||| |||||| | ||||| ||||| ||||||||| |||    
T  30803848 cttaaataggtctttcgtcccttcaactataggtcatttgaattttcgtctctgaagttactaattcttccaatctgtcactgcaaatattaatcaattg 30803947  T
Q  497 aaaaatggtccta 509  Q
    |||||||||||||    
T  30803948 aaaaatggtccta 30803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 51279229 - 51279333
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||||||||||    |||||||||||| || || |||| |  ||||| |||||||||    
T  51279229 aaggcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatca 51279328  T
Q  493 tttga 497  Q
    |||||    
T  51279329 tttga 51279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 33989014 - 33989128
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | || |||||||| || ||||||||||  |||||||||||||    ||||||||||||||||||| | || || ||||| ||||||| ||    
T  33989014 aggcttaaataggtatttcgtcc-tgcaaatatagaccttttgaattttcgtaccttaagttactaatccttccaatctgccactgcaaatattaattat 33989112  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  33989113 ttgaaaaatggtccta 33989128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 505
Target Start/End: Original strand, 33457913 - 33458026
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||| ||||| | ||||||||||| ||||||||| ||  ||||||||||| | ||   |||||||||||||||  | | ||||| ||||| ||||||||    
T  33457913 taaggtttaaataggtctttcgtccatgtaaatatggatcatttgaatttttgcctctgaagttactaatccttttaatatgtcactgcaaatattaatc 33458012  T
Q  492 atttgaaaaatggt 505  Q
    ||||||||||||||    
T  33458013 atttgaaaaatggt 33458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 30654865 - 30654754
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    ||||||| || | |||||||||||||| ||||||||   ||||||||||||||||   |||||||| ||||||| | | || || ||||| |||||||||    
T  30654865 aaggctttaataggtctttcgtccctgcaaatataggtcatttgaattttcgtctatgaagttactgatccttctaatctgccactgcaa-tattaatca 30654767  T
Q  493 tttgaaaaatggt 505  Q
    |||||||||||||    
T  30654766 tttgaaaaatggt 30654754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 30804231 - 30804130
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | || |||||||||| |||||||| |  ||||||||||||||  || |||||||||||||||||| | ||||| ||||| ||||||||||||    
T  30804231 gcttaaataagtatttcgtccctttaaatatatatcatttgaattttcgttcctgaagttactaatccttccaatctgtcactgcaaatattaatcattt 30804132  T
Q  496 ga 497  Q
    ||    
T  30804131 ga 30804130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 10749317 - 10749420
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||||||||||||   |||||||||||||||    |||||||||||||||| | | | ||  ||||| ||||||||||    
T  10749317 aggcttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttctaatctatccctgcaaatattaatcat 10749416  T
Q  494 ttga 497  Q
    ||||    
T  10749417 ttga 10749420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 35432404 - 35432457
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||||||||||    
T  35432404 aaggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtc 35432457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 497
Target Start/End: Original strand, 40256885 - 40256976
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||| || ||||||||  ||||||||||||||||    |||||||||||||||||| | || | |||||| ||||||||||||||    
T  40256885 gtctttcgtccatgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttga 40256976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 55037050 - 55036951
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcg-tct--aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| |||||||||||||||| ||||||||   ||||||||||||| |||  |||||||||||||||||| | || |  ||||| ||||||||||||||    
T  55037050 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 55036951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 33458301 - 33458200
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| | |||||||||||||| ||||||||   ||||||||| |||||    |||||||||||||||| | | ||||| ||||| ||||||||||||    
T  33458301 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattgtcgtccctgaagttactaatccttctaatctgtcactgcaaatattaatcattt 33458202  T
Q  496 ga 497  Q
    ||    
T  33458201 ga 33458200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 11312733 - 11312837
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||||||||| |||||||||   |||||||||||||||    ||||||| ||||||| || | || |  ||||| |||||||||    
T  11312733 aaggcttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatca 11312832  T
Q  493 tttga 497  Q
    |||||    
T  11312833 tttga 11312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 21300506 - 21300415
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    |||||||||||||| |||||||   |||||||||||||||||   ||||||||||||||| || | ||||  || || ||||||||||||||    
T  21300506 gtctttcgtccctgcaaatatatgttatttgaattttcgtctctgaagttactaatcctttcagtctgtccctgtaaatattaatcatttga 21300415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 35432542 - 35432493
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcg 447  Q
    |||||||| | |||||||||||||| |||||||||| |||||||||||||    
T  35432542 ggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcg 35432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 10998256 - 10998155
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    ||||||| |||| ||||||| ||| ||||||||   |||||||||||||||    |||||||||||||||||| | || |  ||||| ||||||||||||    
T  10998256 gcttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T
Q  496 ga 497  Q
    ||    
T  10998156 ga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 468
Target Start/End: Original strand, 53037027 - 53037100
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttcca 468  Q
    |||||||| | ||||||| |||||||||||||||   |||||||||||||||    ||||||||||||||||||    
T  53037027 ggcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttcca 53037100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 38642836 - 38642873
Alignment:
Q  412 tttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  38642836 tttcatccctgcaaatatagactatttgaattttcgtc 38642873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 449
Target Start/End: Complemental strand, 40257259 - 40257206
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||||| |||| |||||||||| ||||||||   ||||||||||||||||    
T  40257259 aaggcttaaatatgtttttcgtccctataaatataagttatttgaattttcgtc 40257206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 501
Target Start/End: Original strand, 9632328 - 9632434
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| | |||||| |||| || ||||||||   |||||||||||||||    |||||||||||||||||||||||||||||||| |||||||||||    
T  9632328 ggcttaaataggtcttttgtccttgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatt 9632427  T
Q  495 tgaaaaa 501  Q
    |||||||    
T  9632428 tgaaaaa 9632434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 23514020 - 23514135
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcg---tctaagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||| ||| ||||| ||   |||||||||||||   |  ||||||||||||||| ||||||| |||||||| ||||||||||    
T  23514020 aggcttaaataagtctttcgtctctgcaaataaagttcatttgaattttcgaccttaaagttactaatcctttcattttgccattgcaaatattaatcat 23514119  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  23514120 ttgaaaaatggtccta 23514135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 25287790 - 25287894
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||||||||||||||||| | | |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  25287790 aaggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 25287889  T
Q  493 tttga 497  Q
    |||||    
T  25287890 tttga 25287894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 409 - 505
Target Start/End: Original strand, 13566421 - 13566520
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||| ||||| ||   ||||||||||| ||||   |||||| | |||||||||||||| |||||||| ||||||||||||||||||||||    
T  13566421 gtctttcgtccctgcaaatacagtacatttgaatttttgtctctgaagttattgatccttccattttgccattgcaaatattaatcatttgaaaaatggt 13566520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 31689894 - 31690009
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||| ||||||| |||||||||| |||||||||||||||    ||||||| |||||||||| | || || ||||| | ||||||||    
T  31689894 aggcttaaataggtcttttgtccctgcaaatatagaccatttgaattttcgtccatgaagttaccaatccttccaatatgccactgcaaatgttaatcat 31689993  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||| ||||||    
T  31689994 ttgaaaaattgtccta 31690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 40422545 - 40422430
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | ||||||| |||||| ||||||||   |||||||||||||||    |||||||||||||||| | | || || ||||| ||||||||||    
T  40422545 aggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcat 40422446  T
Q  494 ttgaaaaatggtccta 509  Q
    ||||||||||||||||    
T  40422445 ttgaaaaatggtccta 40422430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 38619962 - 38619907
Alignment:
Q  460 atccttccattttgtcattgcaattattaatcatttgaaaaatggtcctattggat 515  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  38619962 atccttccattttgtcattacaaatattaatcatttgaaaaatggtcctaatggat 38619907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 7779 - 7675
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | |||||||||||||| |||||||| | |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  7779 aaggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatca 7680  T
Q  493 tttga 497  Q
    |||||    
T  7679 tttga 7675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 27857123 - 27857024
Alignment:
Q  401 ttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||||||    |||||||||||| ||||| | || | |||||| ||||||||||||||    
T  27857123 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttga 27857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 497
Target Start/End: Complemental strand, 22763968 - 22763878
Alignment:
Q  410 tctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||||| |  |||| || ||||||||||||||||   |||||||||||||||||| | |||||||| || ||||||||||||||    
T  22763968 tctttcgtccctgcagctataaaccatttgaattttcgtctctgaagttactaatccttccaatctgtcattgtaaatattaatcatttga 22763878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 43867095 - 43866993
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||| ||||||||||| |||||||||| |||||||||||||||    ||||||||||||||| || | || |  ||||| |||||||||||    
T  43867095 ggcttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 43866996  T
Q  495 tga 497  Q
    |||    
T  43866995 tga 43866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 15716204 - 15716149
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  15716204 aagttactaatccttctattttgccattacaaatattaatcatttgaaaaatggtc 15716149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 449
Target Start/End: Complemental strand, 23514200 - 23514161
Alignment:
Q  410 tctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23514200 tctttcgtccctgtaaatatagactatttgaattttcgtc 23514161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 41251120 - 41251225
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatc 491  Q
    ||||||||||| | |||||||||||||| ||||||||   | ||||||||||||||   |||||||||||||||||| | ||||  | ||| ||||||||    
T  41251120 taaggcttaaataggtctttcgtccctgcaaatataggtcaattgaattttcgtctctgaagttactaatccttccaatatgtccctacaaatattaatc 41251219  T
Q  492 atttga 497  Q
    ||||||    
T  41251220 atttga 41251225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 29190545 - 29190441
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||| ||||| | |||||||||||||| |||||||||| |||||||||||  |||   |||||||||||||||||| | || |  ||||| |||||||||    
T  29190545 aaggtttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatca 29190446  T
Q  493 tttga 497  Q
    |||||    
T  29190445 tttga 29190441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 36623739 - 36623635
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||||||||    || |||||||| |||||| | || |  ||||| |||||||||    
T  36623739 aaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatca 36623640  T
Q  493 tttga 497  Q
    |||||    
T  36623639 tttga 36623635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 29190159 - 29190262
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| || |||||| |||||| |||||||| | || |||||||||||||   |||||||||||||||||| | | ||  ||||| ||||||||||    
T  29190159 aggcttaaatatatctttcctccctgcaaatataggccatctgaattttcgtctctgaagttactaatccttccaatctatccctgcaaatattaatcat 29190258  T
Q  494 ttga 497  Q
    ||||    
T  29190259 ttga 29190262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 40422159 - 40422262
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| | |||||||||||||| ||||||||   || |||||||||||||   |||| ||||||||||||| | || || ||||| ||||||||||    
T  40422159 aggcttaaataggtctttcgtccctgcaaatataggtcatatgaattttcgtctctgaagtaactaatccttccaatctgccactgcaaatattaatcat 40422258  T
Q  494 ttga 497  Q
    ||||    
T  40422259 ttga 40422262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 43866710 - 43866813
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| |||||||||||||||| |||||||| | |||||||||||||||    || |||||||| |||||| | || |  ||||| ||||||||||    
T  43866710 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcat 43866809  T
Q  494 ttga 497  Q
    ||||    
T  43866810 ttga 43866813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 497
Target Start/End: Complemental strand, 547807 - 547717
Alignment:
Q  410 tctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||||| |||||||||  |||||||||||||||    |||||||||||||||||| | || || | ||| ||||||||||||||    
T  547807 tctttcgtccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcatttga 547717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 497
Target Start/End: Complemental strand, 23424896 - 23424794
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| ||||||||||| |||| |||||||| | |||||||||||||||    |||||||||||| ||||| | || |  ||||| |||||||||||    
T  23424896 ggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcatt 23424797  T
Q  495 tga 497  Q
    |||    
T  23424796 tga 23424794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 9632519 - 9632468
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||||| |||||||||||||| |||| ||||| |||||||||||||||    
T  9632519 ggcttaaacaggtctttcgtccctgcaaatctagaccatttgaattttcgtc 9632468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 24529734 - 24529789
Alignment:
Q  451 aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtc 506  Q
    |||||||||||||||||| | || || ||||| |||||||||||||||||||||||    
T  24529734 aagttactaatccttccaatgtgccagtgcaaatattaatcatttgaaaaatggtc 24529789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 33497075 - 33497130
Alignment:
Q  454 ttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggtccta 509  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||| | ||||||    
T  33497075 ttactaatccttccattttgcccttgcaattactaatcatttgaaaattcgtccta 33497130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 36623349 - 36623422
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatcctt 465  Q
    ||||||||||| |||| ||||||||||| |||||||| | |||||||||||||||    |||||||||||||||    
T  36623349 taaggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctt 36623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 37713689 - 37713810
Alignment:
Q  391 taattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtcta---agttactaatccttccattttgtcattgcaattatt 487  Q
    |||| |||| ||||| | ||||||||||||| ||||||||    ||||||||||||||| |   ||||| |||| ||| || | |  |||||||| ||||    
T  37713689 taataaaggtttaaataggtctttcgtccctataaatataagtcatttgaattttcgtccatgaagttattaattctttcaatctaccattgcaaatatt 37713788  T
Q  488 aatcatttgaaaaatggtccta 509  Q
    ||||||||||||||||||||||    
T  37713789 aatcatttgaaaaatggtccta 37713810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 27437619 - 27437515
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||  |||| |||||| |||||||| |  ||||||||||||||    |||||||||||| || ||||||| || |||||||| ||||||||    
T  27437619 ggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatt 27437520  T
Q  495 tgaaa 499  Q
    |||||    
T  27437519 tgaaa 27437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 40525505 - 40525609
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | ||||||||| |||| |||||||    |||||||||||||||    |||||||||||||||||| | || || ||||| |||||||||    
T  40525505 aaggcttaaataagtctttcgttcctgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatca 40525604  T
Q  493 tttga 497  Q
    |||||    
T  40525605 tttga 40525609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 20096015 - 20096122
Alignment:
Q  393 attaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaa 489  Q
    ||||||| ||||| | |||||||||||||| |||||||    ||||||||||| |||    |||||||||||||||||| |||| |  ||||| ||||||    
T  20096015 attaaggtttaaataggtctttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaa 20096114  T
Q  490 tcatttga 497  Q
    ||||||||    
T  20096115 tcatttga 20096122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 40525892 - 40525789
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcat 493  Q
    ||||||||| || |||| |||||||||||||||||  ||||||||||||||||    || ||||||||| ||||| | || |  ||||| ||||||||||    
T  40525892 aggcttaaatatatcttccgtccctgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcat 40525793  T
Q  494 ttga 497  Q
    ||||    
T  40525792 ttga 40525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 497
Target Start/End: Original strand, 41801818 - 41801918
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatccttccattttgtcattgcaattattaatcatttg 496  Q
    |||||| |||| ||||||||||| ||||||||   ||||||||||||||  || |||||||||||||||||| | || |  ||||| |||||||||||||    
T  41801818 cttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 41801917  T
Q  497 a 497  Q
    |    
T  41801918 a 41801918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 20096397 - 20096335
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttcca 468  Q
    |||||||||||||| |||||||| | |||||||||||||||    ||||||||||||||||||    
T  20096397 gtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttcca 20096335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 497
Target Start/End: Original strand, 11478138 - 11478247
Alignment:
Q  391 taattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattatt 487  Q
    |||| |||||||||| | || ||||||||||| ||||||||   |||||||||||||||    ||||||||||||||| || | || |  ||||| ||||    
T  11478138 taataaaggcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatatt 11478237  T
Q  488 aatcatttga 497  Q
    ||||||||||    
T  11478238 aatcatttga 11478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 497
Target Start/End: Complemental strand, 11478508 - 11478427
Alignment:
Q  419 cctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||||||||| ||||||| |||||||    |||||||||||||||||| | || |  ||||| ||||||||||||||    
T  11478508 cctgtaaatatagaccatttgaactttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 11478427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 26740101 - 26740032
Alignment:
Q  399 gcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatcctt 465  Q
    ||||||| |||||||||||||||| ||||||||   |||||||||||||||    |||||||||||||||    
T  26740101 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcctt 26740032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 27436563 - 27436667
Alignment:
Q  398 ggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||| |||  |||| |||||| ||||||||    ||||||||||||||    |||||||||||| || ||||||| || |||||||| ||||||||    
T  27436563 ggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatt 27436662  T
Q  495 tgaaa 499  Q
    |||||    
T  27436663 tgaaa 27436667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 37342779 - 37342852
Alignment:
Q  395 taaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgt--ct-aagttactaatcctt 465  Q
    ||||||||||| || | ||||||||||| ||||| |||| ||||||||||||||  || |||||||||||||||    
T  37342779 taaggcttaaatatctttttcgtccctgcaaatacagaccatttgaattttcgttcctgaagttactaatcctt 37342852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 41182282 - 41182178
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||||||||||||||| |||||||    |||||||||||||||    |||||||||||| || || | || |  ||||| |||||||||    
T  41182282 aaggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatca 41182183  T
Q  493 tttga 497  Q
    |||||    
T  41182182 tttga 41182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 9632689 - 9632614
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttcca 468  Q
    |||||||||| | |||||| ||||||| ||||||||   |||||||||||||||    ||||||||||||||||||    
T  9632689 aaggcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttcca 9632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 497
Target Start/End: Original strand, 38619809 - 38619900
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatcatttga 497  Q
    ||||||||| |||| |||||||||  |||||||||||||||    |||||||||||||||||| | || || |||||   ||||||||||||    
T  38619809 gtctttcgttcctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttga 38619900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 497
Target Start/End: Original strand, 10318 - 10427
Alignment:
Q  391 taattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattatt 487  Q
    |||| |||||||||| | |||||||||||||| |||||||||  |||||||||||||||    |||||||||||||||||| |||| |  ||||| ||||    
T  10318 taataaaggcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatatt 10417  T
Q  488 aatcatttga 497  Q
    ||||||||||    
T  10418 aatcatttga 10427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 979 - 875
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| ||||||||||||||||||||||| | | |||||||||||||||    |||||||||||||||||| | || |  ||||| |||||||||    
T  979 aaggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 880  T
Q  493 tttga 497  Q
    |||||    
T  879 tttga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 8435 - 8547
Alignment:
Q  400 cttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttg 496  Q
    |||||| | |||||||||| || |||||||||   |||||||||||||||    |||||||||||||||||| | || || ||||| |||||||||||||    
T  8435 cttaaataggtctttcgtctctttaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttg 8534  T
Q  497 aaaaatggtccta 509  Q
    |||||||||||||    
T  8535 aaaaatggtccta 8547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 8818 - 8714
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| | || ||||||||||||||||||||   |||||||||| | ||    |||||| ||||||||||| ||||||| ||||| |||||||||    
T  8818 aaggcttaaataggtatttcgtccctgtaaatataggtcatttgaatttccatccgcgaagttattaatccttccaatttgtcactgcaaatattaatca 8719  T
Q  493 tttga 497  Q
    |||||    
T  8718 tttga 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 120584 - 120482
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct-aagttactaatccttccattttgtcattgcaattattaatcatt 494  Q
    |||||||||| |||||||||||| ||| |||||||    |||| ||||||||||  |||||| ||||||||||||||||||| | ||| |||||||||||    
T  120584 aaggcttaaatatgtctttcgtctctgcaaatatatgtcatttcaattttcgtcccaagttattaatccttccattttgtcactacaaatattaatcatt 120485  T
Q  495 tga 497  Q
    |||    
T  120484 tga 120482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 503
Target Start/End: Original strand, 120203 - 120307
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtctaagttactaatccttccattttgtcattgcaattattaatcattt 495  Q
    |||| ||||| | |||||||||||||| |||| ||||  |||||||||||| ||    ||||||||||||||| | ||  | ||||| ||||||||||||    
T  120203 aaggtttaaataggtctttcgtccctgcaaatgtagatcatttgaattttcatc---cttactaatccttccaatatgcaactgcaaatattaatcattt 120299  T
Q  496 gaaaaatg 503  Q
    ||| ||||    
T  120300 gaataatg 120307  T

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Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 509
Target Start/End: Original strand, 13125 - 13248
Alignment:
Q  389 tataattaaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaatta 485  Q
    |||||| |||||||||| |||  |||| ||||||||||||||||| |||||| ||||| |||   |  ||| ||||||| |||||||| |  ||||||||    
T  13125 tataataaaggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaatta 13224  T
Q  486 ttaatcatttgaaaaatggtccta 509  Q
     |||||||||||||| | ||||||    
T  13225 ctaatcatttgaaaattcgtccta 13248  T

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Target: scaffold0202 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 508
Target Start/End: Original strand, 14246 - 14348
Alignment:
Q  409 gtctttcgtccctgtaaatatagactatttgaattttcgtct---aagttactaatccttccattttgtcattgcaattattaatcatttgaaaaatggt 505  Q
    |||||||||||||| |||||||    |||||||||||||||    | |||||||||||||||| |||| || ||||| ||||||| ||||||||||| ||    
T  14246 gtctttcgtccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaatttgccactgcaaatattaataatttgaaaaatcgt 14345  T
Q  506 cct 508  Q
    |||    
T  14346 cct 14348  T

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Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 13891 - 13944
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    |||||||||| |||||||||||| ||||||||||||   |||||||||||||||    
T  13891 aaggcttaaatatgtctttcgtctctgtaaatataggtaatttgaattttcgtc 13944  T

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Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 11047 - 10995
Alignment:
Q  397 aggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc 449  Q
    ||||||||| |||||||||||||||| ||||||||   |||||||||||||||    
T  11047 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtc 10995  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 495
Target Start/End: Original strand, 12017 - 12119
Alignment:
Q  396 aaggcttaaacatgtctttcgtccctgtaaatatagactatttgaattttcgtc---taagttactaatccttccattttgtcattgcaattattaatca 492  Q
    |||||||||| |||| ||||||| |||||||||||||  |||| |||||| |||    |||||| |||||||| || | | |||||| || |||||||||    
T  12017 aaggcttaaatatgtttttcgtctctgtaaatatagatcatttaaatttttgtccctgaagttagtaatcctttcaatctttcattgtaaatattaatca 12116  T
Q  493 ttt 495  Q
    |||    
T  12117 ttt 12119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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