View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13222_high_7 (Length: 459)

Name: NF13222_high_7
Description: NF13222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13222_high_7
NF13222_high_7
[»] chr1 (32 HSPs)
chr1 (12-441)||(50589195-50589625)
chr1 (26-422)||(19598335-19598715)
chr1 (44-422)||(38544758-38545137)
chr1 (23-422)||(17033266-17033669)
chr1 (23-240)||(24658793-24659011)
chr1 (56-240)||(7857517-7857702)
chr1 (23-86)||(27102210-27102273)
chr1 (43-121)||(9313308-9313386)
chr1 (23-240)||(31585759-31585979)
chr1 (23-328)||(4651564-4651861)
chr1 (23-86)||(5389420-5389483)
chr1 (23-89)||(41920468-41920534)
chr1 (23-89)||(46692818-46692884)
chr1 (23-212)||(46814466-46814656)
chr1 (180-269)||(10785490-10785579)
chr1 (23-284)||(42373983-42374246)
chr1 (23-75)||(10785458-10785510)
chr1 (166-240)||(41920315-41920389)
chr1 (166-239)||(20113666-20113739)
chr1 (23-88)||(30685903-30685968)
chr1 (166-269)||(6583335-6583437)
chr1 (50-89)||(15840938-15840977)
chr1 (23-126)||(32864560-32864663)
chr1 (36-142)||(27031852-27031958)
chr1 (50-88)||(30655577-30655615)
chr1 (166-239)||(5389566-5389639)
chr1 (24-81)||(9081506-9081562)
chr1 (180-269)||(16147389-16147478)
chr1 (55-88)||(38564918-38564951)
chr1 (50-87)||(38709970-38710007)
chr1 (373-421)||(4651488-4651536)
chr1 (180-240)||(30686063-30686123)
[»] chr2 (44 HSPs)
chr2 (198-441)||(16959691-16959932)
chr2 (26-422)||(22885135-22885533)
chr2 (23-422)||(15126409-15126791)
chr2 (23-422)||(2062593-2062971)
chr2 (23-287)||(4471740-4472005)
chr2 (23-422)||(25504907-25505298)
chr2 (26-291)||(27739789-27740054)
chr2 (29-274)||(29486960-29487206)
chr2 (20-153)||(16959934-16960067)
chr2 (23-241)||(18680928-18681147)
chr2 (202-288)||(40704007-40704093)
chr2 (132-244)||(3745219-3745333)
chr2 (62-200)||(14566350-14566489)
chr2 (26-121)||(1269467-1269562)
chr2 (27-75)||(16952386-16952434)
chr2 (27-75)||(17023051-17023099)
chr2 (27-75)||(17060357-17060405)
chr2 (27-75)||(17079199-17079247)
chr2 (20-143)||(31902410-31902533)
chr2 (23-89)||(39338864-39338930)
chr2 (166-239)||(17105275-17105348)
chr2 (170-274)||(15722999-15723103)
chr2 (23-240)||(7874155-7874373)
chr2 (23-89)||(14405214-14405280)
chr2 (26-100)||(33788634-33788708)
chr2 (23-88)||(10173577-10173642)
chr2 (46-89)||(23650401-23650444)
chr2 (23-81)||(7695987-7696045)
chr2 (190-268)||(14106692-14106770)
chr2 (23-214)||(37770640-37770833)
chr2 (166-240)||(39339010-39339084)
chr2 (160-269)||(1269316-1269425)
chr2 (151-274)||(15710536-15710659)
chr2 (348-411)||(29486831-29486894)
chr2 (23-89)||(387189-387255)
chr2 (27-89)||(915456-915517)
chr2 (50-88)||(4397456-4397494)
chr2 (45-87)||(42048237-42048279)
chr2 (52-89)||(4162048-4162085)
chr2 (56-89)||(36276203-36276236)
chr2 (27-87)||(13337292-13337352)
chr2 (170-230)||(23650258-23650318)
chr2 (170-222)||(30967270-30967322)
chr2 (23-75)||(34230231-34230283)
[»] chr4 (24 HSPs)
chr4 (23-422)||(12295855-12296257)
chr4 (23-422)||(38929524-38929909)
chr4 (23-422)||(28966567-28966949)
chr4 (62-417)||(21987964-21988303)
chr4 (29-281)||(46698790-46699043)
chr4 (23-291)||(35800303-35800571)
chr4 (151-281)||(50102357-50102487)
chr4 (23-269)||(25753006-25753254)
chr4 (26-215)||(53823423-53823614)
chr4 (23-100)||(16501736-16501813)
chr4 (26-268)||(19672936-19673179)
chr4 (23-127)||(22811159-22811263)
chr4 (35-214)||(19815235-19815416)
chr4 (166-268)||(31050805-31050907)
chr4 (343-405)||(46699094-46699156)
chr4 (24-89)||(6599945-6600010)
chr4 (152-223)||(6600076-6600147)
chr4 (23-89)||(2061737-2061803)
chr4 (23-81)||(41117966-41118024)
chr4 (180-241)||(4305586-4305647)
chr4 (24-89)||(24740103-24740168)
chr4 (339-422)||(16501423-16501507)
chr4 (166-230)||(22811303-22811367)
chr4 (53-89)||(40813810-40813846)
[»] chr5 (22 HSPs)
chr5 (44-422)||(24072286-24072666)
chr5 (23-422)||(27712768-27713151)
chr5 (23-422)||(8730609-8731000)
chr5 (26-259)||(31721522-31721756)
chr5 (23-422)||(22675323-22675701)
chr5 (44-422)||(39184207-39184588)
chr5 (56-274)||(17854099-17854321)
chr5 (43-241)||(7392050-7392250)
chr5 (337-419)||(23426115-23426197)
chr5 (27-269)||(26045967-26046211)
chr5 (26-144)||(39024452-39024569)
chr5 (23-269)||(13954233-13954480)
chr5 (23-126)||(14302429-14302532)
chr5 (27-75)||(8297498-8297546)
chr5 (24-144)||(23426305-23426425)
chr5 (23-89)||(34378114-34378180)
chr5 (23-126)||(7195238-7195341)
chr5 (22-88)||(18593260-18593326)
chr5 (23-89)||(25992023-25992089)
chr5 (180-240)||(698223-698283)
chr5 (23-89)||(21402836-21402902)
chr5 (45-89)||(29087497-29087541)
[»] scaffold1613 (1 HSPs)
scaffold1613 (44-422)||(1037-1416)
[»] chr8 (23 HSPs)
chr8 (24-280)||(17720706-17720962)
chr8 (4-230)||(15906559-15906787)
chr8 (23-319)||(10552052-10552350)
chr8 (23-158)||(30236127-30236264)
chr8 (217-422)||(30236292-30236497)
chr8 (23-284)||(35062277-35062539)
chr8 (29-230)||(10248558-10248761)
chr8 (27-81)||(17657005-17657059)
chr8 (23-240)||(24995394-24995614)
chr8 (23-88)||(32945702-32945767)
chr8 (45-240)||(15821400-15821596)
chr8 (26-89)||(31207364-31207427)
chr8 (23-88)||(9519516-9519581)
chr8 (160-240)||(37986997-37987077)
chr8 (166-240)||(9519361-9519435)
chr8 (23-81)||(16457460-16457518)
chr8 (23-89)||(34389004-34389070)
chr8 (166-240)||(34389150-34389224)
chr8 (23-89)||(36630853-36630919)
chr8 (27-81)||(41791267-41791321)
chr8 (153-230)||(17657132-17657209)
chr8 (23-76)||(41893400-41893452)
chr8 (23-75)||(37986857-37986909)
[»] chr3 (24 HSPs)
chr3 (23-387)||(30935389-30935756)
chr3 (23-230)||(47945585-47945788)
chr3 (23-422)||(1652885-1653286)
chr3 (23-274)||(27398787-27399040)
chr3 (23-284)||(25594519-25594781)
chr3 (23-224)||(5556449-5556653)
chr3 (23-240)||(23328349-23328565)
chr3 (23-121)||(37123366-37123464)
chr3 (20-270)||(823431-823683)
chr3 (23-89)||(17550973-17551039)
chr3 (23-89)||(19176518-19176584)
chr3 (23-89)||(39021275-39021341)
chr3 (27-119)||(14879421-14879514)
chr3 (166-240)||(20611645-20611719)
chr3 (23-121)||(14193924-14194024)
chr3 (166-240)||(2392651-2392725)
chr3 (166-240)||(2394398-2394472)
chr3 (23-81)||(9584052-9584110)
chr3 (166-240)||(40023715-40023789)
chr3 (23-81)||(43012399-43012457)
chr3 (44-89)||(14755285-14755330)
chr3 (48-81)||(30127286-30127319)
chr3 (44-81)||(33143969-33144006)
chr3 (23-87)||(20611801-20611865)
[»] chr7 (40 HSPs)
chr7 (24-281)||(13311660-13311920)
chr7 (23-288)||(11379125-11379392)
chr7 (23-240)||(47457021-47457233)
chr7 (51-319)||(38485341-38485610)
chr7 (59-414)||(9106852-9107209)
chr7 (29-291)||(46133283-46133546)
chr7 (23-101)||(12480890-12480968)
chr7 (30-269)||(42533258-42533499)
chr7 (23-128)||(3478329-3478434)
chr7 (23-269)||(8744987-8745235)
chr7 (23-121)||(24324796-24324895)
chr7 (26-241)||(6716738-6716955)
chr7 (23-236)||(34389829-34390044)
chr7 (166-237)||(37794865-37794936)
chr7 (23-89)||(3419655-3419721)
chr7 (23-89)||(3867132-3867198)
chr7 (24-165)||(9428105-9428247)
chr7 (23-239)||(38306124-38306343)
chr7 (23-90)||(5860287-5860354)
chr7 (339-422)||(12480581-12480664)
chr7 (23-128)||(1320771-1320877)
chr7 (23-89)||(6584925-6584991)
chr7 (27-89)||(10244198-10244260)
chr7 (23-89)||(47325884-47325950)
chr7 (27-81)||(48058657-48058711)
chr7 (336-413)||(29647556-29647633)
chr7 (168-240)||(3866979-3867050)
chr7 (26-102)||(23983198-23983274)
chr7 (23-87)||(35745826-35745890)
chr7 (166-269)||(16954487-16954590)
chr7 (339-422)||(46133576-46133659)
chr7 (166-240)||(3419801-3419875)
chr7 (23-89)||(9349765-9349831)
chr7 (56-94)||(26386207-26386245)
chr7 (169-239)||(47326033-47326103)
chr7 (36-81)||(33435133-33435178)
chr7 (180-240)||(5860447-5860507)
chr7 (172-264)||(12480727-12480818)
chr7 (20-144)||(36449045-36449168)
chr7 (23-75)||(37795019-37795071)
[»] chr6 (16 HSPs)
chr6 (23-422)||(12793796-12794197)
chr6 (12-274)||(32935327-32935587)
chr6 (35-241)||(33968624-33968832)
chr6 (23-267)||(9223878-9224123)
chr6 (23-422)||(13098570-13098948)
chr6 (44-422)||(15943707-15944080)
chr6 (23-269)||(20701802-20702050)
chr6 (339-422)||(26535021-26535104)
chr6 (23-89)||(21266129-21266195)
chr6 (23-92)||(13423479-13423548)
chr6 (64-269)||(3880623-3880830)
chr6 (23-102)||(26534715-26534797)
chr6 (344-422)||(9223721-9223798)
chr6 (23-89)||(26216018-26216084)
chr6 (23-88)||(21265003-21265068)
chr6 (50-94)||(34105424-34105468)
[»] scaffold0200 (1 HSPs)
scaffold0200 (23-269)||(19216-19465)
[»] scaffold0119 (1 HSPs)
scaffold0119 (26-269)||(42140-42386)
[»] scaffold0499 (2 HSPs)
scaffold0499 (340-422)||(6262-6344)
scaffold0499 (23-240)||(6429-6640)
[»] scaffold0062 (4 HSPs)
scaffold0062 (170-274)||(71556-71660)
scaffold0062 (336-406)||(46786-46856)
scaffold0062 (170-274)||(46921-47024)
scaffold0062 (151-274)||(59448-59571)
[»] scaffold0050 (1 HSPs)
scaffold0050 (45-121)||(36691-36767)
[»] scaffold0068 (1 HSPs)
scaffold0068 (180-240)||(35931-35991)
[»] scaffold0063 (1 HSPs)
scaffold0063 (23-102)||(58130-58209)


Alignment Details
Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 12 - 441
Target Start/End: Original strand, 50589195 - 50589625
Alignment:
Q  12 gaacactgaataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagac 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  50589195 gaacactaaataagcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagac 50589294  T
Q  112 gggcaccccttacccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgaccc 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| |||    
T  50589295 gggcaccccttacccccagtccaccagagaaaccgtagccagccaaacaagaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggccc 50589394  T
Q  212 accagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacac 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50589395 accagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagctaagctagaatgacacacac 50589494  T
Q  311 cctcaaaaccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaat 410  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50589495 cctcaaaaccaccataaacacattcacaacccaaaactcaagcaagaggcagcgacaaggaatatggacccgaataacagaggcggcctccaaaaggaat 50589594  T
Q  411 cacccacaacaaacccccacaaagcatccac 441  Q
    |||||||||||||||||||||||||||||||    
T  50589595 cacccacaacaaacccccacaaagcatccac 50589625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 26 - 422
Target Start/End: Complemental strand, 19598715 - 19598335
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||||| |||||||| | |||||||||| ||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  19598715 cccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccccttacc 19598616  T
Q  126 cccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagca 225  Q
    | | | |||||||||||      | |||||||  || || ||||||||||||||||| | ||| ||||||||||| |||||| ||||||||| |||||||    
T  19598615 ctcggtccaccagagaa-----tgtcagccaagcaaaaatgcagctagacgccaacttctgatctcgaagcaaaagtaaccggcccaccagagtccagca 19598521  T
Q  226 cacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaat-aaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccacc 323  Q
    ||||| | |||||||             ||||||||||||||||||||| |||||||||| ||| ||  |||| ||| ||||  |||||| |||| ||||    
T  19598520 cacaaaaagtaagac-------------tgcggtggtgcaaacatcaataaaaaaaggaataaatgctcagctcgaaggacatgcacccttaaaaacacc 19598434  T
Q  324 ataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
     |||| || ||  | ||||||||||||| | ||| |||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  19598433 ctaaacaccttagccacccaaaactcaaactagatgtagcgacaacgaatatggacctgaataacagaggcggtctccaaaaggaatcacccacaacaa 19598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 44 - 422
Target Start/End: Original strand, 38544758 - 38545137
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaa 143  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||  |||||| |||| || |||| ||| |||||| |  ||||| ||||||||||||    
T  38544758 ccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaa 38544856  T
Q  144 c--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    |  |  |  ||  |||| ||||  |||||||||| ||||||||| || ||||||||||| ||| || ||||| |||||||||||||||||||||||||||    
T  38544857 caccaaaatcaatcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagaca 38544956  T
Q  242 tacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccaccataaatacattcacaac 340  Q
     || ||||||||||||||||||||||||||||| ||||||||| ||| ||  |||| ||| ||||||||||||| ||| |||| |||| |  || || ||    
T  38544957 aacgacatgatttgcggtggtgcaaacatcaatcaaaaaggaaaaaatgctcagctcgaaggacacacaccctc-aaagcaccctaaacatcttaacgac 38545055  T
Q  341 ccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    ||||||||||| |||||| ||||||  | ||| ||||| |  ||||||||||||   ||||||||| |||||||||||||||    
T  38545056 ccaaaactcaaacaagagctagcgatgatgaagatggaacgtaataacagagacattctccaaaagaaatcacccacaacaa 38545137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 17033669 - 17033266
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||||| ||||||| |||| |||||||  |||  |||||| || |||| |||||||||     
T  17033669 aagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccc 17033570  T
Q  122 tacccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    ||| | | |  ||||| ||||  ||||||| |||||||| ||||  ||| ||||||||||| || |||| ||||| ||||| |||||| |||||||||||    
T  17033569 tactctcggttcaccatagaatcaccgtagtcagccaaacaagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaat 17033470  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    ||||||||||||| |||||||| || ||| |||||| |||||||||||||||||| ||||||||| ||| ||  |||| ||| |||| ||||||||||||    
T  17033469 ccagcacacaataagtaagacaaacgacaagatttgtggtggtgcaaacatcaatcaaaaaggaaaaaatgctcagctcgaaggacatacaccctcaaaa 17033370  T
Q  319 ccaccata-aatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccac 417  Q
     ||||||| || || |  | |||||||||||||| ||| ||  | |||| | ||| |||||||| ||||||| || | ||||||||||| ||||||||||    
T  17033369 -caccatataacacctcaataacccaaaactcaaacaatagccaacgacgacgaaaatggacccaaataacataggccgcctccaaaagaaatcacccac 17033271  T
Q  418 aacaa 422  Q
    |||||    
T  17033270 aacaa 17033266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 24659011 - 24658793
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||  |||||||| ||| ||||||||||||||||||||| |||  |||||||  |||| || ||| || |||  |||||||||||    
T  24659011 aagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacccctt 24658912  T
Q  123 acccccagcccaccagagaa-accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcc 221  Q
     |||||    |||||||||| ||| || | || |||| | ||  |||||||||| |||||||||||| | ||||||||| |||||| |||||| || |||    
T  24658911 gcccccgatacaccagagaacaccatatcaagtcaaacatgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggactcc 24658812  T
Q  222 agcacacaatatgtaagac 240  Q
    ||||||||| |||||||||    
T  24658811 agcacacaaaatgtaagac 24658793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 7857702 - 7857517
Alignment:
Q  56 ctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaa-accgtagccagc 154  Q
    ||||||||||||||||||||| |||| |||||||  |||| || ||| || |||  ||||||||||  |||||||  |||||||||| | | || | ||     
T  7857702 ctcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaacaacatatcaagt 7857603  T
Q  155 caaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||| |  |  ||| |||||| |||||||||||| ||||||||||| ||| || |||||  ||| |||||||||||||||||||||    
T  7857602 caaacataattgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaatatgtaagac 7857517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 27102273 - 27102210
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagccc 86  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| ||||    
T  27102273 aagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 9313308 - 9313386
Alignment:
Q  43 gccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||   |||| |||||| || |||| ||||||||||    
T  9313308 gccaaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccct 9313386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 31585759 - 31585979
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||  |||  || ||| ||  ||  ||||||||||     
T  31585759 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctc 31585858  T
Q  123 acccccagcccaccagag--aaaccgtagccagccaaa-taagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    |||| |||  ||||||||  |||||  | | || ||||  ||||  |||||||||| || ||||||||| ||||||| |||| ||||| ||||||| ||     
T  31585859 accctcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaaaaa 31585958  T
Q  220 ccagcacacaatatgtaagac 240  Q
     ||||| ||| ||||||||||    
T  31585959 tcagcaaacactatgtaagac 31585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 328
Target Start/End: Complemental strand, 4651861 - 4651564
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||| |  ||| ||| ||| ||||||||||||||||||||| |||| |||| ||  ||||| | ||  |  |||| |||||||||||    
T  4651861 aagcccaaaaccaaactagaaccagaga-ctgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcacccctt 4651763  T
Q  123 acccccagcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||| |  ||||||||||||   ||||||| | ||| || || |  |||||||| |||||||| |  |||||||||||| | | |||| | |||||||    
T  4651762 acccccggtacaccagagaaacactgtagccaacgaaacaataatgtcgctagacgtcaactcccaaactcgaagcaaaataatctgacc-atcagaatc 4651664  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaac 319  Q
    ||| |        |||||||| || || ||| ||||||||| ||||||||||||  |||||||| |||| |  |||| ||| |||||||||||||||||     
T  4651663 cagaa--------gtaagacagacgacgtgacttgcggtggagcaaacatcaatcgaaaaggaaaaaaatctcagctcgaaggacacacaccctcaaaa- 4651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 5389420 - 5389483
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagccc 86  Q
    |||||||||| |||||||| | |||||||||| ||||||||||||||||||||| |||| ||||    
T  5389420 aagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccc 5389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 41920534 - 41920468
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  41920534 aagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 41920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 46692818 - 46692884
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| |||||||||||  ||||||||||||||||||||| |||| |||||||    
T  46692818 aagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccacc 46692884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 46814466 - 46814656
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||| |||| | |||||| |||||| | ||| ||||||||||||||||||||| |||| |||||||  |||| || ||| || |||  |||||||||||    
T  46814466 aagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctt 46814565  T
Q  123 acccccagcccaccagagaa-accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgaccca 212  Q
     ||||| |  |||||||||| ||| || | || |||| | ||  ||| |||||| ||||||| |||| ||||| ||||| |||||| ||||    
T  46814566 gcccccggtacaccagagaacaccatatcaagtcaaacaggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggccca 46814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 10785490 - 10785579
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||||||||| |||||||||||||||||| |||||| ||| |||||||||||   |||||||| || ||| |||  |||| ||||||||||    
T  10785490 actcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaaacagtaagacaaaccacaagataggcgggggtgcaaaca 10785579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 42374246 - 42373983
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| ||||  |||||  |||| ||||||||||| |||||||||||||| | |||||  ||  || |||| || |||| |||||||||     
T  42374246 aagcccaaaaccaaaacttgaaccaaaagactgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccca 42374147  T
Q  122 tacccccagcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
     |||| | |  ||||| ||||||   || | |||||||| ||||  ||| |||||| |  ||||||||| ||||| ||||| ||||||  ||||||||||    
T  42374146 aaccctcggtacaccaaagaaacattgtcgtcagccaaacaagattgcaactagacactgactcccgatctcgaatcaaaagtaaccggtccaccagaat 42374047  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaa 284  Q
     || ||||||||| ||| ||||  | ||||| |  ||| || ||||||||||||| |||||||||    
T  42374046 acaacacacaataagta-gacaggcgacatgttaagcgatgatgcaaacatcaatcaaaaaggaa 42373983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 10785458 - 10785510
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||| |||||    
T  10785458 aagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaa 10785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 41920389 - 41920315
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| ||||||| |||| ||||| ||||||  || | |||||||||||||||||||    
T  41920389 gcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaatatgtaagac 41920315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 20113666 - 20113739
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaaga 239  Q
    |||||||||| || ||||||||| ||||||| |||| ||||| ||||||  || | ||||||||||||||||||    
T  20113666 gcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaatatgtaaga 20113739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 30685903 - 30685968
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    |||||||||| | |||||| | |||||||||| ||||||||||| ||||||||| |||| ||||||    
T  30685903 aagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccac 30685968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 6583335 - 6583437
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgca 265  Q
    |||||||||| || ||||||||| ||||||||||| |||||| ||||||   | ||| ||||||| | ||| |||| || || |||| ||||||||||||    
T  6583335 gcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgaca-acgacgtgatatgcggtggtgca 6583433  T
Q  266 aaca 269  Q
    ||||    
T  6583434 aaca 6583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 15840938 - 15840977
Alignment:
Q  50 aactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  15840938 aactgactcccgatctcgaatcaaaagtgatcagcccacc 15840977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 32864560 - 32864663
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| | |||||||| | || |||||||||||| ||||| |||  |||||||   ||| |||||| || | || ||||||||||     
T  32864560 aagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctc 32864659  T
Q  123 accc 126  Q
    ||||    
T  32864660 accc 32864663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 27031852 - 27031958
Alignment:
Q  36 aacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccac 135  Q
    |||||| |||||||| ||| ||| ||||||||||||||||| |||| ||||||   |||| || ||| || |||  ||||||||||| ||||| |  |||    
T  27031852 aacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacac 27031951  T
Q  136 cagagaa 142  Q
    |||||||    
T  27031952 cagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 30655615 - 30655577
Alignment:
Q  50 aactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccac 30655577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 5389566 - 5389639
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaaga 239  Q
    |||||||||| |  ||||||||| ||||||| |||| ||||| |||||   || ||||||||||||||||||||    
T  5389566 gcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaaga 5389639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 9081506 - 9081562
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||||| ||||||||  | |||| |||||||||||||||||||||||||| ||||    
T  9081506 agcccaaaagcaaacttga-ctaaagcactggctcccgatctcgaatcaaaagtgatc 9081562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 16147478 - 16147389
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||||||||| |||||  |||| ||| || |||||| ||| | | ||||||||| |||||||| |  ||||||| ||||||||||||||||    
T  16147478 actcccgatctcgaactaaaagtaatcggcccaccggaacctaacacacaataagtaagacaaatgacatgatatgcggtggtgcaaaca 16147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 38564951 - 38564918
Alignment:
Q  55 gctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    ||||||||||||||||||||||||||| ||||||    
T  38564951 gctcccgatctcgaatcaaaagcgatcggcccac 38564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 38710007 - 38709970
Alignment:
Q  50 aactggctcccgatctcgaatcaaaagcgatcagccca 87  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  38710007 aacttgctcccgacctcgaatcaaaagcgatcagccca 38709970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 4651536 - 4651488
Alignment:
Q  373 tatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    |||||||||||||||||||| |||| || || || ||||||||||||||    
T  4651536 tatggacccgaataacagaggcggcttcaaatagaaatcacccacaaca 4651488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 30686063 - 30686123
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    ||||||||| ||||||| |||| ||||| ||||||  || ||| |||||||||||||||||    
T  30686063 actcccgatctcgaagccaaatgaaccggcccaccgaaaaccaacacacaatatgtaagac 30686123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 166; Significance: 1e-88; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 198 - 441
Target Start/End: Complemental strand, 16959932 - 16959691
Alignment:
Q  198 aaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagct 296  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  ||||    
T  16959932 aaattaaccggcccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaatatcaatcaaaaaggaacaaaagctcagct 16959833  T
Q  297 agaatgacacacaccctcaaaaccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacgg 396  Q
    ||||||||||||||| || |||||||| |||| || ||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  16959832 agaatgacacacaccttcgaaaccaccctaaacacttt--caacccaaaacttaa-caagaggtagcgacaaggaatatggacccgaataacagaggcgg 16959736  T
Q  397 cctccaaaaggaatcacccacaacaaacccccacaaagcatccac 441  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  16959735 cctccaaaaggaatcacccacaacaaatccccacaaagcacccac 16959691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 26 - 422
Target Start/End: Original strand, 22885135 - 22885533
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| |||||||  ||||||||| | |||||| ||||||||||| |||    
T  22885135 cccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttcaggatcaaaccag-cgggcacccctaacc 22885233  T
Q  126 cccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    ||||  ||||||||| |||  ||||||| |||||| ||| |||||||||||| |||||||||||| ||||||||||| |||||| |||||||| |||||     
T  22885234 cccaatccaccagagcaacaccgtagcccgccaaacaaggaagcagctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccagcatccaa 22885333  T
Q  224 cacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccac 322  Q
    ||||||| ||||||  || |  |||||| ||||| |||||||||||||||| ||||||||| | | ||  | || ||| ||||| |||||||  || |||    
T  22885334 cacacaaaatgtaaagcagaagacatgaattgcgatggtgcaaacatcaatcaaaaaggaaaagacgctcaactcgaaggacacgcaccctc-caatcac 22885432  T
Q  323 cataaatacattcacaacccaaaactcaagcaagaggtagcgac-aaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    | |||| || ||  |||||| |||||||| |||||||||||||| | | || |||||||||||||||||||  |||||| |||||||||||||||| |||    
T  22885433 cttaaacaccttagcaacccgaaactcaaacaagaggtagcgacgacgaaaaatggacccgaataacagaggtggcctcaaaaaggaatcacccaccaca 22885532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 15126409 - 15126791
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||| || |||||||||| | ||||||||||||||||||||  |||| |||||||  ||||||||||||||| ||||||| |||||||    
T  15126409 aagcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacccaacgagacgggaacccctt 15126508  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |||||| | |||||||||||     || || ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| |    
T  15126509 acccccggtccaccagagaa-----agacaaccaaacaagaatgcagctagacgccaactcccgatctcgaagcaaaagtaactgacccaccagaatcta 15126603  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaacca 321  Q
    |||||||| | ||||||             |||||||||||||||| ||||||||||||||||||| ||  || |  || ||||| ||||||||||||||    
T  15126604 gcacacaaaaagtaaga-------------ttgcggtggtgcaaacgtcaataaaaaaggaacaaatgctcagttcaaaggacacgcaccctcaaaacca 15126690  T
Q  322 ccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    || |||| || |   | | ||||||||||| |||||||||||||||| ||||| ||||| ||||||||| || || ||| ||||| |||| |||||||||    
T  15126691 ccctaaacacttgagccatccaaaactcaaacaagaggtagcgacaacgaataaggacctgaataacagggatggtctctaaaagaaatctcccacaaca 15126790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 2062971 - 2062593
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| |||||||                  |||||||||||||||    
T  2062971 aagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccacc------------------agacgggcacccctt 2062890  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||  | |||||||||||  | |||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| |||  | |||||||| |||    
T  2062889 accccg-gtccaccagagaatgatcgtagccagccaaacaagaatgcagctagacaccaactcccgatctcgaagcaaaagtaattggcccaccagcatc 2062791  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagca-agctagaatgacacacaccctcaaaac 319  Q
    ||||||||| ||||||     ||| ||||||||||||||  ||||||||||||| ||||||||||||| ||  | || ||| ||||| ||||||| ||||    
T  2062790 cagcacacactatgta-----tacgacatgatttgcggtaatgcaaacatcaatcaaaaaggaacaaatgctcaactcgaaggacacgcaccctctaaac 2062696  T
Q  320 caccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaa 419  Q
    ||||||||| || |   ||||||||||||||| | ||||||||| |||| |||||||||||||||| |||||| |  |||||||||||||||||||||||    
T  2062695 caccataaacacctaagcaacccaaaactcaaacgagaggtagcaacaatgaatatggacccgaatcacagaggcaacctccaaaaggaatcacccacaa 2062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 287
Target Start/End: Complemental strand, 4472005 - 4471740
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| ||||||||   |||||||||| ||||||||||||||||||| |||||| |||||||  ||| ||||||| |||||||||||| ||||||    
T  4472005 aagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccagacgggc-cccctt 4471907  T
Q  123 acccccagcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||| | |||||||||||||   |||| |||||||| || |||| || |||||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  4471906 acccccggtccaccagagaaacactgtagtcagccaaacaataaagtagatagacgccaactcccgatcttgaagcaaaagtaaccggcccaccagaatc 4471807  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaa 287  Q
    || ||||||||| |||||||  || |||  |||||||||||||||||||||||| ||||||||||||    
T  4471806 catcacacaataagtaagactgacgacaaaatttgcggtggtgcaaacatcaatcaaaaaggaacaa 4471740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 25504907 - 25505298
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| | ||  ||||||||||| ||||||||||||||| |||||||||  | |||||  ||| || |||| || || | ||||||||||    
T  25504907 aagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 25505006  T
Q  122 tacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    || || ||| |||||| || |||  |||||||||| |||| ||| || |||||||| |||||| | ||| ||||||||||| ||| || |||||||||||    
T  25505007 tatcctcagtccaccataggaacaccgtagccagcaaaatcagatagtagctagacaccaacttctgatctcgaagcaaaagtaatcggcccaccagaat 25505106  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    ||||||||||||| |||||||| |||||  ||||| |||||| |||||||||||| ||||||||| ||||||  ||||  || ||||| |||||          
T  25505107 ccagcacacaataagtaagacagacaaccagatttacggtggggcaaacatcaatcaaaaaggaaaaaaagctcagctctaaggacactcaccc------ 25505200  T
Q  319 ccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccaca 418  Q
          |||| || || ||||| |||||||||| |||||||||||| ||| ||| ||||||||||| |||||||||  ||||||||||  ||||||||||    
T  25505201 ------taaacaccttaacaactcaaaactcaaacaagaggtagcgtcaacgaaaatggacccgaaaaacagagacaacctccaaaagacatcacccaca 25505294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 26 - 291
Target Start/End: Complemental strand, 27740054 - 27739789
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||| ||||||||||  || ||  |||| ||| |||||| ||||||||||||||| |||||||  ||||||||||| | ||||| |||||||||| |||    
T  27740054 cccaagaccaaacttgaaccgaaacactgactctcgatcttgaatcaaaagcgatcggcccaccagacttcaggaccaatccagatgggcacccctaacc 27739955  T
Q  126 cccagcccaccagag-aaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagc 224  Q
    ||||| ||||||||| ||||||||| | |||||| | |||||||||||||| | |||||||||| ||||||| ||||||| || ||| ||||||||||||    
T  27739954 cccagtccaccagagaaaaccgtagtccgccaaacatgaaagcagctagacactaactcccgatctcgaagcgaaattaatcggcccgccagaatccagc 27739855  T
Q  225 acacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc 291  Q
    | |||||||| || | | ||||||||| || | ||||||||||||||||| ||||||||| ||||||    
T  27739854 atacaatatg-aaaatagacaacatgaattacagtggtgcaaacatcaatcaaaaaggaaaaaaagc 27739789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 274
Target Start/End: Complemental strand, 29487206 - 29486960
Alignment:
Q  29 aaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttaccccc 128  Q
    |||||||||| ||  || |||||||| ||  | |||||||||||||||||||  ||| |||  |||||| || | |||||||||||||||||| ||||||    
T  29487206 aaaaccaaacatgaaccgaagaactgactatcaatctcgaatcaaaagcgattggcc-accagacttcaagatcaaaccagacgggcacccctaaccccc 29487108  T
Q  129 agcccaccagagaaac-cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccac-cagaatccagcac 226  Q
    || ||||||||||||| |  |||| |||| | |||||||||||||||| |||||||||||| ||||||||||| |||||| |||   |||||||||||||    
T  29487107 agtccaccagagaaacaccgagcccgccagacaagaaagcagctagacaccaactcccgatctcgaagcaaaagtaaccggccccgtcagaatccagcac 29487008  T
Q  227 acaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaat 274  Q
    |||| | |||| ||| ||||||||| ||||||||||||||||||||||    
T  29487007 acaacaagtaaaacagacaacatgaattgcggtggtgcaaacatcaat 29486960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 16960067 - 16959934
Alignment:
Q  20 aataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccc 119  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||  |||| ||||||| |||| ||||||||||    
T  16960067 aataagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttaggaccctaccaaacgggcaccc 16959968  T
Q  120 cttacccccagcccaccagagaaaccgtagccag 153  Q
    ||||||||||  |||| |||||||||||||||||    
T  16959967 cttacccccaatccacaagagaaaccgtagccag 16959934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 18681147 - 18680928
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  ||| ||||||| ||||||||||||||||||| || ||| |||||||  ||||||  ||| || |||| |||||  ||||    
T  18681147 aagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggcagtcctt 18681048  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||| | |||| ||||||  ||||||| || ||||| || || || |||||||||||||||||||| ||||||| ||||  |  |||||| |||||||    
T  18681047 acccccggtccactagagaaacaccgtagtcaaccaaacaataacgccgctagacgccaactcccgatctcgaagc-aaatggattgacccatcagaatc 18680949  T
Q  221 cagcacacaatatgtaagaca 241  Q
    || ||||||||| ||||||||    
T  18680948 caacacacaataagtaagaca 18680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 40704093 - 40704007
Alignment:
Q  202 taaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaa 288  Q
    |||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  40704093 taaccggcccaccagaatccagcacacaatatgtatgacaaacgacatgatttgcggtggtgcaaacctcaataaaaaaggaacaaa 40704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 3745333 - 3745219
Alignment:
Q  132 ccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacaca 229  Q
    |||||||||||||  ||||||| ||||||  |||  ||||||||||||||||||||||| || ||| |||| |||||| |||||||||||||||||||||    
T  3745333 ccaccagagaaacagcgtagcctgccaaacgagactgcagctagacgccaactcccgatctcaaagtaaaagtaaccggcccaccagaatccagcacaca 3745234  T
Q  230 atatgtaagacatac 244  Q
    ||| ||| |||||||    
T  3745233 ataagtacgacatac 3745219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 14566489 - 14566350
Alignment:
Q  62 atctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaa--accgtagccagccaaat 159  Q
    ||||||||||| || |||||  |||| |  ||||||||||| ||||||||||||||||| || |||||| |||||||||||  ||||||||  | ||||     
T  14566489 atctcgaatcagaatcgatcgccccatcagacttcaggaccaaaccagacgggcacccc-taaccccagtccaccagagaaacaccgtagctcgtcaaac 14566391  T
Q  160 aagaaagcagctagacgccaactcccgatttcgaagcaaaa 200  Q
    || ||||||||||||| ||||||| |||| |||||||||||    
T  14566390 aaaaaagcagctagacaccaactctcgatctcgaagcaaaa 14566350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 1269562 - 1269467
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||||| |||| |||||||  |||| |||||  || |||| ||||||||||    
T  1269562 cccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccct 1269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 16952386 - 16952434
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16952386 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 16952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 17023051 - 17023099
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17023051 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 17060357 - 17060405
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17060357 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17060405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 17079247 - 17079199
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17079247 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17079199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 31902410 - 31902533
Alignment:
Q  20 aataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccc 119  Q
    ||||||| ||||||||||||||  ||| ||||||| ||||||||||||||| |||||||||  |||||||  ||||||| | | ||  ||| || |||||    
T  31902410 aataagctcaaaaccaaacttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacaccc 31902509  T
Q  120 cttacccccagcccaccagagaaa 143  Q
    || |||||| | ||||||||||||    
T  31902510 ctaacccccggtccaccagagaaa 31902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 39338864 - 39338930
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| |||||||||||||||||||||||||| |||||||    
T  39338864 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccacc 39338930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 17105348 - 17105275
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaaga 239  Q
    ||||||||||||| |||||  || || |||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  17105348 gcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaaga 17105275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 15723103 - 15722999
Alignment:
Q  170 ctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    |||||| ||||||||| || ||||| ||||| ||||||  |||||||||||||||| ||||| |||||||||    |||||||||||  |||| ||||||    
T  15723103 ctagacaccaactccctatctcgaaccaaaagtaaccggtccaccagaatccagcagacaatttgtaagacaatagacatgatttgcaatggtacaaaca 15723004  T
Q  270 tcaat 274  Q
    |||||    
T  15723003 tcaat 15722999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 7874373 - 7874155
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||| | |||||| ||| ||||||||||||||||||||| ||||  ||||||  |||| || ||| || |||  |||||||| |     
T  7874373 aagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatc 7874274  T
Q  123 acccccagcccaccagagaa-accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcc 221  Q
     ||| | |  ||| |||||| ||| || | || |||  | ||  |||||||||| |||||||||||| |||||||||||  ||||| |||||| ||  ||    
T  7874273 gccctcggtacactagagaacaccatatcaagtcaagcaggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggacacc 7874174  T
Q  222 agcacacaatatgtaagac 240  Q
    |||||||||||| ||||||    
T  7874173 agcacacaatatttaagac 7874155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 14405280 - 14405214
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| |||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  14405280 aagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccacc 14405214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 33788634 - 33788708
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcagga 100  Q
    |||||| |||||| ||  ||||||||||| ||||| |||||||||||||||||||| |||||||  |||||||||    
T  33788634 cccaaagccaaacctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagacttcagga 33788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 10173577 - 10173642
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    ||||||||||||||||||| |||||| ||||  || |||||||||||||||||| |||| ||||||    
T  10173577 aagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccac 10173642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 23650444 - 23650401
Alignment:
Q  46 aaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccacc 23650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 7696045 - 7695987
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    |||||||||||| |||||| |||||||||||| |||||| | |||||||||||| ||||    
T  7696045 aagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagtgatc 7695987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 14106692 - 14106770
Alignment:
Q  190 tcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaac 268  Q
    ||||||||||| |||||| |||||| ||| ||| ||||||||| | |||||| || |||||||  ||||||||||||||    
T  14106692 tcgaagcaaaagtaaccggcccaccggaaaccaacacacaataagcaagacagacgacatgataagcggtggtgcaaac 14106770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 37770640 - 37770833
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||| |||  | |||||| || |||| ||||  |||||||||| |||| ||||||| ||| | |||||| || |||| ||||||||||     
T  37770640 aagcccaaaaccaaaattgatctaaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctc 37770739  T
Q  123 acccccagcccaccagagaaaccgt--agccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccacc 214  Q
    |||| | |  ||||||||||||  |  | |  |||||||   |  || ||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  37770740 accctcggtacaccagagaaacactaaatcgcgccaaatcgaattgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccacc 37770833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 39339010 - 39339084
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| ||||||| |||| ||| | ||||||  || |||||||||||||||||||||    
T  39339010 gcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccagcacacaatatgtaagac 39339084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 1269425 - 1269316
Alignment:
Q  160 aagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggt 259  Q
    ||||| ||||||||||  | ||||||||| ||||||||||||||||||||||| | | | |||||| ||||   |||||||| || |||||||    |||    
T  1269425 aagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagacaaacgacatgatagatggt 1269326  T
Q  260 ggtgcaaaca 269  Q
    ||||||||||    
T  1269325 ggtgcaaaca 1269316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 15710659 - 15710536
Alignment:
Q  151 cagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatg 250  Q
    |||||||| ||||  ||| ||| || |||||||||||| || |||||||| |||  | |||||||||||| |||| ||||| |||||||||    |||||    
T  15710659 cagccaaacaagattgcaactaaacaccaactcccgatctcaaagcaaaagtaattggcccaccagaatctagcagacaatttgtaagacaatagacatg 15710560  T
Q  251 atttgcggtggtgcaaacatcaat 274  Q
    |||| |  |||| |||||||||||    
T  15710559 attttcaatggtacaaacatcaat 15710536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 29486894 - 29486831
Alignment:
Q  348 tcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatc 411  Q
    |||| |||||||||||||||| ||||||||||| ||||| ||||| | |||||  |||||||||    
T  29486894 tcaaacaagaggtagcgacaacgaatatggacctgaataccagaggcagcctctgaaaggaatc 29486831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 387255 - 387189
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||| ||||| | |||||| | ||||||| || ||||||||||| ||||||||| ||||||||||||    
T  387255 aagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccacc 387189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 915456 - 915517
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||||   |||| ||||| ||  ||||||||||||||||||||||||||||||    
T  915456 ccaaaaccaaacttgaatcaaa-aactgactttcgatctcgaatcaaaagcgatcagcccacc 915517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 4397456 - 4397494
Alignment:
Q  50 aactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  4397456 aacttgctcccgacctcgaatcaaaagcgatcagcccac 4397494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 42048237 - 42048279
Alignment:
Q  45 caaagaactggctcccgatctcgaatcaaaagcgatcagccca 87  Q
    |||| |||||||||||| |||||||||||||| ||||||||||    
T  42048237 caaaaaactggctcccggtctcgaatcaaaagtgatcagccca 42048279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 4162048 - 4162085
Alignment:
Q  52 ctggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  4162048 ctggctcccgatctcgaatcaaaagtgatcggcccacc 4162085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 36276203 - 36276236
Alignment:
Q  56 ctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||||||||||||| |||||||||    
T  36276203 ctcccgatctcgaatcaaaagcgaacagcccacc 36276236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 13337352 - 13337292
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagccca 87  Q
    |||||||| |||||| | |||||||||| || ||||| |||||||||||| |||| |||||    
T  13337352 ccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggccca 13337292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 23650318 - 23650258
Alignment:
Q  170 ctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaa 230  Q
    |||||| |||||||||| | |||||||  | ||||||| ||||||||||||||| ||||||    
T  23650318 ctagacaccaactcccggtctcgaagcctagttaaccggcccaccagaatccaggacacaa 23650258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 30967270 - 30967322
Alignment:
Q  170 ctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |||||| ||||||| |||||| |||||||||  ||||| ||||||||||||||    
T  30967270 ctagacaccaactctcgattttgaagcaaaagcaaccggcccaccagaatcca 30967322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 34230283 - 34230231
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    |||||||||| ||||||||  ||||||||||| |||| |||||||||| ||||    
T  34230283 aagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaa 34230231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 3e-83; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 12296257 - 12295855
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| ||||||||  ||||||||||| ||   |||||||||||||||||| || || ||||  ||||||||||| ||||||| |||||||||||    
T  12296257 aagcccaaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcacccctt 12296158  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||| | |||| |||| |  |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||    
T  12296157 acccccggtccactagaggatcaccgtagctagccaaataagaatgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccagaatc 12296058  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaac 319  Q
    ||||||||||||||||||||| || ||   ||||||||||||||||||||| || ||||||||| ||| ||  |||| ||| |||||  ||||||||||     
T  12296057 cagcacacaatatgtaagacagacgactaaatttgcggtggtgcaaacatcgatcaaaaaggaaaaaatgctcagctcgaaggacacgtaccctcaaaa- 12295959  T
Q  320 caccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctcc-aaaaggaatcacccaca 418  Q
    |||| |||| |  ||  || |||||||||||| |||||||||||||||| ||||||| |||| ||||| |||| |  ||||| |||||||||||||||||    
T  12295958 caccttaaacaacttagcagcccaaaactcaaacaagaggtagcgacaacgaatatgaaccccaataatagaggcatcctccaaaaaggaatcacccaca 12295859  T
Q  419 acaa 422  Q
    ||||    
T  12295858 acaa 12295855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 38929909 - 38929524
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| |||||||| |||||||||||| |||  |||||||||||||||| |||| ||||| |  |||||||||||||||||||||||||||||||    
T  38929909 aagcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccagacgggcacccctt 38929810  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |||||| | |||||||||||      |||| ||||| |||||   ||||| ||||||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  38929809 acccccggtccaccagagaa-----tgccaaccaaacaagaatagagctaaacgccaacttccgatctcgaagcaaaagtaaccggcccaccagaatcca 38929715  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaac--atcaataaaaaaggaac-aaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    |||||||| | ||||||             |||||||||| || ||  |||||| || ||||||| ||||||  ||||  || |||||||||||||||||    
T  38929714 gcacacaaaaagtaaga-------------ttgcggtggttcatacatatcaatcaagaaggaacaaaaagctcagctcaaaggacacacaccctcaaaa 38929628  T
Q  319 ccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccaca 418  Q
     |||| | || ||  |  | ||||||||| ||| ||||| |||||||||| |||||||||||||||||||| || | | |||||||||||||||||||||    
T  38929627 acacccttaacaccatggccacccaaaacccaaacaagaagtagcgacaacgaatatggacccgaataacataggcagtctccaaaaggaatcacccaca 38929528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 28966949 - 28966567
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||  || |||  ||||||||||||||| |||||||| || |||    
T  28966949 aagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagacttcaggacccaactagacgggcgccactt 28966850  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |||||| | ||||  |||||      | ||||||||   ||| ||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||    
T  28966849 acccccggtccacttgagaat-----gtcagccaaacctgaatgcagctagacgccaacttccgatctcgaagccaaagtaaccggcccaccagaatcca 28966755  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagcaag-ctagaatgacacacaccctcaaaacca 321  Q
    |||||| | | |||||||             ||||||||||||||||||||| ||||||||||||| ||  | || ||| ||||||||||||||||| ||    
T  28966754 gcacactaaaagtaagac-------------tgcggtggtgcaaacatcaatcaaaaaggaacaaatgctcggctcgaaggacacacaccctcaaaaaca 28966668  T
Q  322 ccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    || |||| || |   | |||||||||||||    ||||||| ||||| ||| ||||| | |||||| |||| ||| ||||||||||||||||||||||||    
T  28966667 ccctaaacacctcagccacccaaaactcaaaacggaggtagtgacaacgaaaatggatctgaataagagaggcggtctccaaaaggaatcacccacaaca 28966568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 62 - 417
Target Start/End: Original strand, 21987964 - 21988303
Alignment:
Q  62 atctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaaccgtagccagccaaataa 161  Q
    |||||||||||||||||||| |  || |  ||||||||||||||||||||||||||||||||||||| | |||||||||||      |||||||||| ||    
T  21987964 atctcgaatcaaaagcgatcggttcatcagacttcaggacccaaccagacgggcaccccttacccccggtccaccagagaat-----gccagccaaacaa 21988058  T
Q  162 gaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtgg 261  Q
    ||| |||||||||| |||||||| ||| ||||| ||||| |||||| ||||||||||| |||||||||| | |||||||             ||||||||    
T  21988059 gaatgcagctagacaccaactcctgatctcgaaacaaaagtaaccggcccaccagaattcagcacacaaaaagtaagac-------------tgcggtgg 21988145  T
Q  262 tgcaaacatcaataaaaaaggaacaaaa-gca-agctagaatgacacacaccctcaaaaccaccataaatacattcacaacccaaaactcaagcaagagg 359  Q
    | || |||||||| |||||||||||||| ||  ||||  || || || ||||||||||  ||   |||| || ||  | ||||||||||||| |||||||    
T  21988146 ttcatacatcaatcaaaaaggaacaaaatgctcagctcaaaggatacgcaccctcaaagacaatctaaacactttagcgacccaaaactcaaacaagagg 21988245  T
Q  360 tagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccac 417  Q
    ||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  21988246 tagcgacaacgaatatggacctgaataacatagacgatctccaaaaggaatcacccac 21988303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 281
Target Start/End: Original strand, 46698790 - 46699043
Alignment:
Q  29 aaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttaccccc 128  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||  ||| ||||||| || |||| |||||||||  |||| |    
T  46698790 aaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcaccccacaccctc 46698889  T
Q  129 agcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcac 226  Q
     | |||||| ||||||   |||||   ||||| ||||  |||||||||| |||||||||||| ||||||||||| ||| || ||||| ||||||||||||    
T  46698890 ggtccaccaaagaaactctgtagcttaccaaacaagactgcagctagacaccaactcccgatctcgaagcaaaagtaatcggcccac-agaatccagcac 46698988  T
Q  227 acaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaag 281  Q
    ||||||||||||||| |  |||  |||||| ||||||||||||||||| ||||||    
T  46698989 acaatatgtaagacagaatacaaaatttgcagtggtgcaaacatcaatcaaaaag 46699043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 291
Target Start/End: Complemental strand, 35800571 - 35800303
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||| |   |||||||||| || ||||||||||||||||||||||| |  ||||  ||||||| ||| || |||| ||||||| |||    
T  35800571 aagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcaccactt 35800472  T
Q  123 acccccagcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    ||||| | || |||||||||||   || |||| ||||| ||||  |  | | || ||| |||||| || |||||||||||| |||||||||| |||||||    
T  35800471 accccgatcc-accagagaaacattgtcgccaaccaaacaagattgtcgttggatgcccactcccaatctcgaagcaaaat-aaccgacccatcagaatc 35800374  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc 291  Q
    || ||||||||| |||||||| || |||||||||||||||| |||| ||||| | ||||||| | ||||||    
T  35800373 caacacacaataagtaagacagacgacatgatttgcggtggagcaatcatcactcaaaaagggaaaaaagc 35800303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 50102487 - 50102357
Alignment:
Q  151 cagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatg 250  Q
    |||||||| ||||| ||| ||||||||||||| || || ||||||||||| ||| ||    |||||||||||||||||||||||||||||| || |||      
T  50102487 cagccaaacaagaatgcaactagacgccaacttccaatctcgaagcaaaagtaatcggttgaccagaatccagcacacaatatgtaagacagacgacaaa 50102388  T
Q  251 atttgcggtggtgcaaacatcaataaaaaag 281  Q
    |||| ||||||||||||||||||| ||||||    
T  50102387 atttacggtggtgcaaacatcaatcaaaaag 50102357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 25753254 - 25753006
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||  ||||||  |||| |||||| ||  |||||||||| |||     
T  25753254 aagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctc 25753155  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    ||| || |  ||||||||||  |||  | |  |||||| ||||  |||||||||| || ||||||||| ||||||||||||||| |  |||| | ||| |    
T  25753154 acctccggtacaccagagaaacaccacatcacgccaaacaagattgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaac 25753055  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||||| |||| | ||||| || || |||| || || ||| |||||||||    
T  25753054 cagcaaacaaaaagtaaggcaaacgacataatatgtggttgtgcaaaca 25753006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 53823423 - 53823614
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||  | |||||  |||| | |||| || |||| |||||||||| |||    
T  53823423 cccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacc 53823522  T
Q  126 cccagcccaccagagaaac-cgtag-ccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccacca 215  Q
     || |  |||||||||||| |  || | ||||||  ||||  |||| ||||| || ||||||||| ||||||||||| |||||| |||||||    
T  53823523 tccggtacaccagagaaacaccaagtcaagccaagcaagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccacca 53823614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 16501813 - 16501736
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcagga 100  Q
    ||||||||||||||||| |  ||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  16501813 aagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcagga 16501736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 268
Target Start/End: Complemental strand, 19673179 - 19672936
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    |||||||| ||||||| |||||||||||| |||| |||||||||| ||||| ||   | |||||  |||| |||||| || |||| |||||||||| |||    
T  19673179 cccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacc 19673081  T
Q  126 cccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    |||   | |||||||||  | | || | ||||||| ||||  |||||||||| |  ||||||||| ||||||||||| |||||| |||||  |||  ||     
T  19673080 cccgatcaaccagagaaatatcatatcaagccaaacaagattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccactggaaatcaa 19672981  T
Q  224 cacacaatatgtaagacatacaacatgatttgcggtggtgcaaac 268  Q
    | |  |||| | |||||| |||||||||| |||||||||||||||    
T  19672980 cgcgaaataagcaagacaaacaacatgatatgcggtggtgcaaac 19672936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 22811159 - 22811263
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||  |||| |||||||  |||| | |||| || |||| |||||| |||     
T  22811159 aagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctc 22811258  T
Q  123 acccc 127  Q
    |||||    
T  22811259 acccc 22811263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 19815235 - 19815416
Alignment:
Q  35 aaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagccca 134  Q
    ||||||| |||||||||||| |||| |||||||||| |||||  ||| | |||||  |||| |||||| || |||| |||||||||| |||||| | | |    
T  19815235 aaacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaa 19815334  T
Q  135 ccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccacc 214  Q
    ||||| ||  ||  || | ||||||| ||||  |||||||||| || |||| |||| ||||||||||| |||| | ||||||    
T  19815335 ccagaaaaatacaatatcaagccaaacaagattgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccacc 19815416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 31050805 - 31050907
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgca 265  Q
    |||||||| | || ||||||| | ||||||||||| |||||| |||||| ||| ||| |||| |||| | |||||| || |||||||  |||||||||||    
T  31050805 gcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacacataataagcaagacagacgacatgataagcggtggtgca 31050904  T
Q  266 aac 268  Q
    |||    
T  31050905 aac 31050907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 46699094 - 46699156
Alignment:
Q  343 aaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaa 405  Q
    ||||||||| |||||| |||||||||  |||||||||| |||||||||||  |||||||||||    
T  46699094 aaaactcaaacaagagatagcgacaacaaatatggacctgaataacagaggtggcctccaaaa 46699156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 6599945 - 6600010
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| |||||||   |||||||| | ||||||||||| |||||||||||||| |||||||    
T  6599945 agcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccacc 6600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 6600076 - 6600147
Alignment:
Q  152 agccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    ||||||| ||||  ||| |||||| |||||||||||| || ||||||||||||||| || | ||||||||||    
T  6600076 agccaaacaagattgcaactagacaccaactcccgatctcaaagcaaaattaaccggcctatcagaatccag 6600147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 2061737 - 2061803
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| ||||  ||  ||||||||||| ||| | ||||||||||||||| ||||||||||||    
T  2061737 aagcccaaaatcaaaactgatccaaagaactgactctcaatctcgaatcaaaagtgatcagcccacc 2061803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 41117966 - 41118024
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    |||||||||||| || ||| |||||||||||  || |||||||||||||||||| ||||    
T  41117966 aagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 4305647 - 4305586
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    ||||||||| ||||||| |||| ||||| ||||||  || |||| |||||||||||||||||    
T  4305647 actcccgatctcgaagccaaatgaaccggcccaccgaaaaccagtacacaatatgtaagaca 4305586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 24740103 - 24740168
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||| |||  ||||| ||||| |||||||||| |||| | |||||||| |||||||    
T  24740103 agcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccacc 24740168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 16501507 - 16501423
Alignment:
Q  339 acccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctcca-aaaggaatcacccacaacaa 422  Q
    ||||||| | ||| ||||||  |||||||| |  |||||||||||| |||| || |||||||||  |||||||||||||||||||    
T  16501507 acccaaagcacaaacaagagtaagcgacaacgggtatggacccgaaaaacaaaggcggcctccaccaaggaatcacccacaacaa 16501423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 22811303 - 22811367
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaa 230  Q
    ||| |||||| |||| | ||||| ||||||||||| |||||||||||||  || |||||||||||    
T  22811303 gcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 40813810 - 40813846
Alignment:
Q  53 tggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||||||||||||| |||| |||||||    
T  40813810 tggctcccgatctcgaatcaaaagtgatcggcccacc 40813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 44 - 422
Target Start/End: Original strand, 24072286 - 24072666
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaa 143  Q
    ||||||||||| || |||||||| |||||||||||||||||| |||  |||| |||||| || |||| |||||||||  |||| | | ||||||||||||    
T  24072286 ccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccaccagagaaa 24072385  T
Q  144 cc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    |   ||||| | ||||| ||||   |||||| ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||| ||||||||||    
T  24072386 cactgtagctatccaaacaagattacagctaaacgccaactcccgatcttgaagcaaaagtaaccggcccactagaatccagcacacaacatgtaagaca 24072485  T
Q  242 tacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccaccataaatacattcacaac 340  Q
     || ||||||||| ||||| |  |||||||||| ||| ||||| ||| ||  | || ||| ||||| ||||||  ||| |||| |||| || || |||||    
T  24072486 gacgacatgatttacggtgataaaaacatcaatcaaataggaaaaaatgctcaactcgaaggacacgcaccct-taaagcaccctaaacaccttaacaac 24072584  T
Q  341 ccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||||||| || |||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  24072585 ccaaaacttaaacaagagctagcgacaacgaatatggacccgaataacagaggcggcctctaaaagaaatcacccacaacaa 24072666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 27713151 - 27712768
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||| ||||||   ||||||||||||||||||||||||| |||||    
T  27713151 aagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagacttcaggacccaaccagacgggcaaccctt 27713052  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    | |||||| |||||||||||      |||| ||||| ||||| ||| ||||||||||||||||||  ||||||||||| |||||| |||| |||||||||    
T  27713051 atccccagtccaccagagaa-----tgccaaccaaacaagaatgcatctagacgccaactcccgacctcgaagcaaaagtaaccggcccatcagaatcca 27712957  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaag-caagctagaatgacacacaccctcaaaacca 321  Q
    |||||||| | |||||||             ||| |||||||||| |||||| ||||||||||||| | | |||| ||| ||| | |  |||||||| ||    
T  27712956 gcacacaaaaagtaagac-------------tgcagtggtgcaaatatcaatcaaaaaggaacaaatgcccagcttgaaggacgcgcctcctcaaaatca 27712870  T
Q  322 ccataaatacattcacaaccc-aaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaac 420  Q
    || |||| || ||  | |||| |||||| || |||||||||||||||| ||||||  |||||||||| |||| ||| |||||| ||||||||||||||||    
T  27712869 ccctaaacaccttagccacccaaaaactgaaacaagaggtagcgacaacgaatataaacccgaataatagaggcggtctccaagaggaatcacccacaac 27712770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 8731000 - 8730609
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| | ||  ||||||||||| ||||||||||||||| |||||||||  | |||||  ||| || |||| || || | ||||||||||    
T  8731000 aagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 8730901  T
Q  122 tacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    || || ||| |||||| || |||  |||||||||| |||| ||| || |||||||| |||||| | ||| ||||||||||| ||| || |||||||||||    
T  8730900 tatcctcagtccaccataggaacaccgtagccagcaaaatcagatagtagctagacaccaacttctgatctcgaagcaaaagtaatcggcccaccagaat 8730801  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    ||||||||||||| |||||||| |||||  ||||| |||||| |||||||||||| ||||||||| ||||||  ||||  || ||||| |||||          
T  8730800 ccagcacacaataagtaagacagacaaccagatttacggtggggcaaacatcaatcaaaaaggaaaaaaagctcagctctaaggacactcaccc------ 8730707  T
Q  319 ccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccaca 418  Q
          |||| || || ||||| |||||||||| |||||||||||| ||| ||| ||||||||||| |||||||||  ||||||||||  ||||||||||    
T  8730706 ------taaacaccttaacaactcaaaactcaaacaagaggtagcgtcaacgaaaatggacccgaaaaacagagacaacctccaaaagacatcacccaca 8730613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 31721756 - 31721522
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||||||||||  ||  ||| ||||||| |||||||||||||||||||||||||| |||||    ||||||| |||  | |||| ||||||||||||||    
T  31721756 cccaaaaccaaaaatgaaccagagaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacc 31721657  T
Q  126 cccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    ||| | |||||||||||||  |||||||| ||||| || || || |||||| |||||||||||||  |||||||||| | |||| |||| |||||||||     
T  31721656 cccggtccaccagagaaacatcgtagccaaccaaacaataatgccgctagaagccaactcccgatcgcgaagcaaaa-tgaccggcccatcagaatccat 31721558  T
Q  224 cacacaatatgtaagacatacaacatgatttgcggt 259  Q
     |||||||| |||||||| || || ||| |||||||    
T  31721557 aacacaataagtaagacagacgacgtgacttgcggt 31721522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 22675323 - 22675701
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| | |||||  |||| || ||||||| |||||   | |||||    
T  22675323 aagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttagaacccaactagacgaata-ccctt 22675421  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |   || | |||||||||||      |   | ||||  | || ||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||    
T  22675422 a---ccggtccaccagagaa-----tgttcgtcaaaccaaaatgcagctagacgccaactcccggtctcgaagcaaaagtaaccggcccaccagaatcca 22675513  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaacca 321  Q
     ||||||| | ||||||             ||| |||||| |||||||||||||||||| |||| | ||  | ||  || ||||| || |||||||| ||    
T  22675514 acacacaaaaagtaaga-------------ttgtggtggttcaaacatcaataaaaaagaaacagatgctcaactcaaaggacacgcatcctcaaaaaca 22675600  T
Q  322 ccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    || |||| || ||  | |||||||||||||  ||||||||||||||| ||||| |||||||||||||||||  ||  |||||||||| ||||||||||||    
T  22675601 ccctaaacaccttggccacccaaaactcaaagaagaggtagcgacaacgaataaggacccgaataacagaggtggtttccaaaaggagtcacccacaaca 22675700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 422
Target Start/End: Original strand, 39184207 - 39184588
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaa 143  Q
    ||||||||||| || |||||||||||||||||| |||| |||||||  ||  || || | || |||| |||||||||  |||  | |  |||||||||||    
T  39184207 ccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcaccccaaaccgtcggttcaccagagaaa 39184306  T
Q  144 cc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    |   || |||| ||||| ||||  ||| ||||||||||||||||||| ||||| ||||| |||||  ||||||||||||||||||||||||  |||||||    
T  39184307 cactgtcgccaaccaaacaagattgcaactagacgccaactcccgatctcgaatcaaaagtaacctgcccaccagaatccagcacacaataaataagaca 39184406  T
Q  242 tac-aacatgatttgcggtggtgc-aaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccaccataaatacattcaca 338  Q
     || | |||| ||||||||||||| |||||||||| ||||||||| ||| ||  |||| ||| || ||||||||||| |||  ||  |||  | || |||    
T  39184407 gacgaccatgctttgcggtggtgcaaaacatcaatcaaaaaggaaaaaatgctcagcttgaa-ga-acacaccctcacaacaccctaaaaccccttaaca 39184504  T
Q  339 acccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| ||||| || ||| ||  |||||||  ||| ||||||||||||||| |||  ||| |||||||| ||||||| |||||||    
T  39184505 accccaaactaaaacaatagccagcgacaccgaaaatggacccgaataactgaggtggcatccaaaagaaatcaccaacaacaa 39184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 274
Target Start/End: Original strand, 17854099 - 17854321
Alignment:
Q  56 ctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaac--cgtagccag 153  Q
    ||||||||||||| ||||||||| || |||||||  |||||| |||| ||  ||| |||||||||| |||||| | ||||||||| |||  | |||||||    
T  17854099 ctcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccagaggaacaccctagccag 17854198  T
Q  154 ccaaat-aagaaagcagctagacgccaactcccgatttcgaagcaaaat-taaccgacccaccagaatccagcacacaatatgtaagacatacaacatga 251  Q
    |||||  ||||  | |||||||  |||||||||||| || ||||||||  |||  | ||||||||||||||||||||||| |||||||||  | ||||||    
T  17854199 ccaaaacaagattgtagctagagaccaactcccgatctcaaagcaaaaagtaaatggcccaccagaatccagcacacaatttgtaagacaatcgacatga 17854298  T
Q  252 tttgcggtggtgcaaacatcaat 274  Q
     |||| |||| ||||||||||||    
T  17854299 gttgcagtggcgcaaacatcaat 17854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 241
Target Start/End: Original strand, 7392050 - 7392250
Alignment:
Q  43 gccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaa 142  Q
    |||||||||||| ||||||||||||||||||||| |||| | |||||  |||| |||||| || |||| |||||||||| |||| | |  || |||||||    
T  7392050 gccaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaa 7392149  T
Q  143 --accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
      |||  | | ||||||| ||||  |||||||||| |||||||||||| ||||||||||| ||||||  ||| ||||  ||| ||||||| | |||||||    
T  7392150 acaccaaatcaagccaaacaagattgcagctagacaccaactcccgatctcgaagcaaaagtaaccggtccatcagataccaacacacaaaaagtaagac 7392249  T
Q  241 a 241  Q
    |    
T  7392250 a 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 419
Target Start/End: Complemental strand, 23426197 - 23426115
Alignment:
Q  337 caacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaa 419  Q
    ||||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| |||||||  ||||||||| |||||||    
T  23426197 caacccaaaactcaagcaagaggtagcgacaacatatatggacctgaataccagaggcggcctcttaaaggaatcccccacaa 23426115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 269
Target Start/End: Original strand, 26045967 - 26046211
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaac-cagacgggcaccccttacc 125  Q
    ||||||||||||||| ||||||  |||  ||||||||||||||||||||| |||| |  ||||  |||| |||||| ||| || |  ||||||||||| |    
T  26045967 ccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcaccccttaac 26046066  T
Q  126 cccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    ||  |  ||||||||||||  |  | |  |||||||||||  |||||||| | || ||||||| | ||||||||||||||| |  |||||||||| | ||    
T  26046067 ccg-gtacaccagagaaacaccaaatcacgccaaataagattgcagctagccaccgactcccggtctcgaagcaaaattaatctgcccaccagaaactag 26046165  T
Q  224 cacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||||||| | ||| |||| || ||||||| ||||||||||||||||    
T  26046166 cacacaaaaagtatgacaaacgacatgatatgcggtggtgcaaaca 26046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 39024452 - 39024569
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||||||||||||||  |||||||| || |||||||||||||||||||||||||    ||||| |||||||||||| |  |||| ||||| |||| |||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggca-ccctcacc 39024550  T
Q  126 cccagcccaccagagaaac 144  Q
    | ||| |||||||||||||    
T  39024551 ctcagtccaccagagaaac 39024569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 269
Target Start/End: Original strand, 13954233 - 13954480
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| ||||||| | || ||||||||||||||||||||| |||| |||||||  |||| |||||| || ||||  |||||||||     
T  13954233 aagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcaga-aggcacccctc 13954331  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||  | |  ||||||||||  ||   | | || |||||||||  |||||||||| || ||||  ||| ||||||||||| |||||| ||||||  || |    
T  13954332 accttcggtacaccagagaaacacaaaatcaagtcaaataagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaac 13954431  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||||| |||| |  || |||| || |||||||  |||| ||||||||||    
T  13954432 cagcatacaaaaattatgacaaacgacatgataagcggcggtgcaaaca 13954480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 14302429 - 14302532
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  ||||||||||| ||||| |||||||| |||||| |||||| |||||  |||| |||||| || |||| ||||| ||||     
T  14302429 aagcccaaaaccaaacttgctccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctc 14302528  T
Q  123 accc 126  Q
    ||||    
T  14302529 accc 14302532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 8297546 - 8297498
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8297546 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23426425 - 23426305
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctta 123  Q
    |||||||||||||| |||   | |||||||| ||||| ||||||||||||||| | || | |||||  ||||||||||| ||||||||||  |||||| |    
T  23426425 agcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaaccagacggttacccctaa 23426326  T
Q  124 cccccagcccaccagagaaac 144  Q
     |||||| |||||| ||||||    
T  23426325 accccagtccaccaaagaaac 23426305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 34378180 - 34378114
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  34378180 aagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 34378114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 7195238 - 7195341
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||  | |||||| |||||||||||| ||||||||||||||||||||| |||| || ||||  |||| | | || || |||| ||||||||||     
T  7195238 aagcccaaactctaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctc 7195337  T
Q  123 accc 126  Q
    ||||    
T  7195338 accc 7195341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 18593326 - 18593260
Alignment:
Q  22 taagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    ||||||||||| | |||||| | |||||||||  ||||||||||||||||||||| |||| ||||||    
T  18593326 taagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccac 18593260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 25992089 - 25992023
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||| || | || ||||||||| ||| |||||||||||||||||||||  |||||||    
T  25992089 aagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccacc 25992023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 698283 - 698223
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    ||||||||| ||||||| |||| ||||| ||||| | || |||||||||||||||||||||    
T  698283 actcccgatctcgaagccaaatgaaccggcccactaaaaaccagcacacaatatgtaagac 698223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 21402836 - 21402902
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||| ||||||||||| || | |||||||||| ||||||||||||||  ||||| |||| |||||||    
T  21402836 aagctcaaaaccaaacctgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacc 21402902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 29087541 - 29087497
Alignment:
Q  45 caaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| |||| |||||||||||||||| |||||| |||||    
T  29087541 caaagaactgactcctgatctcgaatcaaaagggatcagtccacc 29087497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 44 - 422
Target Start/End: Original strand, 1037 - 1416
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaa 143  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||  |||||| |||| || |||| ||| |||||| |  ||||| ||||||||||||    
T  1037 ccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaa 1135  T
Q  144 c--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    |  |  |  ||  |||| ||||  |||||||||| ||||||||| || ||||||||||| ||| || ||||| |||||||||||||||||||||||||||    
T  1136 caccaaaatcaatcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagaca 1235  T
Q  242 tacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccaccataaatacattcacaac 340  Q
     || ||||||||||||||||||||||||||||| ||||||||| ||| ||  |||| ||| ||||||||||||| ||| |||| |||| |  || || ||    
T  1236 aacgacatgatttgcggtggtgcaaacatcaatcaaaaaggaaaaaatgctcagctcgaaggacacacaccctc-aaagcaccctaaacatcttaacgac 1334  T
Q  341 ccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    ||||||||||| |||||| ||||||  | ||| ||||| |  ||||||||||||   ||||||||| |||||||||||||||    
T  1335 ccaaaactcaaacaagagctagcgatgatgaagatggaacgtaataacagagacattctccaaaagaaatcacccacaacaa 1416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 5e-60; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 24 - 280
Target Start/End: Original strand, 17720706 - 17720962
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctta 123  Q
    ||||||||||| || |||  ||||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||| |||||||| |||||||||||    
T  17720706 agcccaaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccagacaggcacccctta 17720804  T
Q  124 cccccagcccaccagagaaac-cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    ||||  | ||||||||| ||| || ||||||||||| ||||| ||||||| |||||||||| |||| || |||||||| ||| || ||||||||||||||    
T  17720805 cccctggtccaccagaggaacacggagccagccaaacaagaatgcagctatacgccaactctcgatctcaaagcaaaagtaatcggcccaccagaatcca 17720904  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaa 280  Q
    |||||||| |||||||| | || ||||  ||| |||||||||||||||||||||||||    
T  17720905 gcacacaaaatgtaagaaagacgacatatttttcggtggtgcaaacatcaataaaaaa 17720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 15906787 - 15906559
Alignment:
Q  4 actgaaatgaacactgaataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggaccc 103  Q
    |||||||  |||||| ||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||| |||||||  |||||||||||     
T  15906787 actgaaagaaacactaaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggacca 15906688  T
Q  104 aaccagacgggcaccccttacccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaat 201  Q
    ||||| |||||||||| | |||||||| ||||| |||||  ||| ||||| |||  | |||||||||| ||||| |||||||||||| ||||| |||||     
T  15906687 aaccaaacgggcacccttaacccccagtccacccgagaaacaccatagcccgccggacaagaaagcagttagacaccaactcccgatctcgaaacaaaag 15906588  T
Q  202 taaccgacccaccagaatccagcacacaa 230  Q
    | |||| | | |||||||||| |||||||    
T  15906587 ttaccggctcgccagaatccaacacacaa 15906559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 319
Target Start/End: Complemental strand, 10552350 - 10552052
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||| |||||||||||| |  ||| ||||||| |||||||||| ||||||||||||||| |||||||  ||||||| ||| || |||| |||||||||||    
T  10552350 aagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcaga-gggcacccctt 10552252  T
Q  123 acccccagcccaccagagaaacc--gtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
     ||||  | | |||||||||||   |||| ||  |||| || || |  ||||| |||||||||||||| |||||||||||| | | | |||| || ||||    
T  10552251 gcccctggtctaccagagaaacactgtagtcaatcaaacaataatgtcgctaggcgccaactcccgatctcgaagcaaaatgatcgg-cccatcaaaatc 10552153  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaagg-aacaaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    |||||||||||| |||||||| || || ||| ||||||||| |||||||||||| ||||||| || ||||||  |||| ||| |||||||||||||||||    
T  10552152 cagcacacaataagtaagacagacgacgtgacttgcggtggagcaaacatcaatcaaaaaggaaaaaaaagcgcagctcgaaggacacacaccctcaaaa 10552053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 30236127 - 30236264
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||  ||||||  ||||||  ||| || |||| |||||||||||    
T  30236127 aagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcacccctt 30236226  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaa 158  Q
    |||||| | |||||||||||  |||||||||| |||||    
T  30236227 acccccggtccaccagagaaacaccgtagccaaccaaa 30236264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 422
Target Start/End: Original strand, 30236292 - 30236497
Alignment:
Q  217 aatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaa-agcaagctagaatgacacacaccctca 315  Q
    |||||| ||||||||| |||||||   | |||||||| ||||||| |||||||||||| ||||||||| ||| |   |||| ||| ||||||||||||||    
T  30236292 aatccaacacacaataagtaagacgggcgacatgattggcggtggagcaaacatcaatcaaaaaggaaaaaacactcagctcgaaggacacacaccctca 30236391  T
Q  316 aaaccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcaccc 415  Q
    |||  ||| |||| || || |||||||| |||||||  ||||| ||||||||| || |||| ||||||| ||||||| |||||||||| || ||||||||    
T  30236392 aaa-taccctaaacaccttgacaacccacaactcaaataagagctagcgacaacgagtatgaacccgaaaaacagaggcggcctccaatagaaatcaccc 30236490  T
Q  416 acaacaa 422  Q
    || ||||    
T  30236491 acgacaa 30236497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 35062539 - 35062277
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||| |  | | ||||||| ||| |||||||||||||||| ||||| |||||||  ||||||| ||| || ||||  ||||||||||    
T  35062539 aagcccaaaaccaaactagaacaagagaactgactctcgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcacccctt 35062440  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||| |   |   ||| |||  || ||||||| ||||| || || ||  ||||||||||||||||||| |||||||||||| ||  | | || |||||||    
T  35062439 accctcgatctttcagtgaaacactgtagccaaccaaacaataatgcctctagacgccaactcccgatctcgaagcaaaatgaa-tggctcatcagaatc 35062341  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaa 284  Q
    |||||||||||| |||||||  || || ||| ||||||||| |||||||||||| ||| |||||    
T  35062340 cagcacacaataagtaagacggacgacgtgacttgcggtggagcaaacatcaatcaaataggaa 35062277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 10248558 - 10248761
Alignment:
Q  29 aaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttaccccc 128  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||| |||| | ||||| || || |||||  ||  ||| || ||||||| ||||||    
T  10248558 aaaaccaaacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcaccccc 10248657  T
Q  129 agcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcac 226  Q
     |  ||||||||||  |||  | | ||||||| || |  |||||||||| || ||||||||| ||||||||||| |||| | |||||| ||| ||| |||    
T  10248658 ggtacaccagagaaacaccaaatcaagccaaacaaaattgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccac 10248757  T
Q  227 acaa 230  Q
    ||||    
T  10248758 acaa 10248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 17657005 - 17657059
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  17657005 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatc 17657059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 24995394 - 24995614
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||  |||  || ||| ||  ||   | |||||||     
T  24995394 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctc 24995493  T
Q  123 acccccagcccaccagag--aaaccgtagccagccaaa-taagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
     |||||||  ||||||||  |||||  | | || ||||  ||||  |||||||||| || ||||||||| ||||||| |||| ||||| ||||||  ||     
T  24995494 gcccccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 24995593  T
Q  220 ccagcacacaatatgtaagac 240  Q
    |||||||||||||||||||||    
T  24995594 ccagcacacaatatgtaagac 24995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 32945702 - 32945767
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    |||||||||||||||||||   ||||||| || ||||||||||||||||||||| |||||||||||    
T  32945702 aagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccac 32945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 15821400 - 15821596
Alignment:
Q  45 caaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaa-a 143  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||  |||| || ||| || |||  ||||||||||  ||| | |  |||||||||| |    
T  15821400 caaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccctcggtacaccagagaaca 15821499  T
Q  144 ccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    || || | ||||||| | ||  | |||||| | |||||| ||||| || ||| |||| ||| || |||||||||  ||| |||||||||||||||||    
T  15821500 ccatatcaagccaaacaggattgtagctaggcaccaacttccgatctcaaagaaaaaataatcggcccaccagataccaacacacaatatgtaagac 15821596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 31207364 - 31207427
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    ||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 31207427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 9519581 - 9519516
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||  |||| ||||||    
T  9519581 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccac 9519516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 37986997 - 37987077
Alignment:
Q  160 aagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    ||||| ||| |||||| || ||| ||||| ||||||| |||| ||||| ||||||  || |||||||||||||||||||||    
T  37986997 aagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaagac 37987077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 9519435 - 9519361
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| ||||||| |||| ||||| || ||   || |||||||||||||||||||||    
T  9519435 gcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccagcacacaatatgtaagac 9519361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 16457460 - 16457518
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||| |||| | |||||| | |||||||||| ||||||||||||||||||||| ||||    
T  16457460 aagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatc 16457518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 34389004 - 34389070
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| |||  |||||||||||||||| |||| |||||||    
T  34389004 aagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccacc 34389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 34389150 - 34389224
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| ||||||| |||| ||||| || | |  || |||||||||||||||||||||    
T  34389150 gcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccagcacacaatatgtaagac 34389224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 36630919 - 36630853
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| |||||| | | |||||||||| | ||||||||||||| ||||| |||| |||||||    
T  36630919 aagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccacc 36630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 41791267 - 41791321
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||| |||||||  |||||||| || ||| ||||||||||||||||||||||    
T  41791267 ccaaaactaaacttgaaccaaagaagtgactctcgatctcgaatcaaaagcgatc 41791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 17657132 - 17657209
Alignment:
Q  153 gccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaa 230  Q
    |||||||||||  | |||||| | || ||||||||| |||||||||||||||||| |||| | ||| ||| |||||||    
T  17657132 gccaaataagattgtagctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaacacacaa 17657209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 41893400 - 41893452
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaag 76  Q
    |||||||||| ||| |||| | |||||||||| |||||||||||||||||||||    
T  41893400 aagcccaaaaacaa-cttgagacaaagaactgactcccgatctcgaatcaaaag 41893452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 37986857 - 37986909
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    |||| ||||| | |||||| | |||||||||| ||||||||||||||||||||    
T  37986857 aagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaa 37986909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 387
Target Start/End: Original strand, 30935389 - 30935756
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||| ||||||||||||||  ||||| ||||  |||||||||| ||||||||||||||||||||||| |||||||  ||| || |||| |||||||||||    
T  30935389 aagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcacccctt 30935488  T
Q  123 acccccagcccaccagagaaacc--gtagccagccaaat-aagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    |||||| | |||||||||||||   ||||||| |||||  || || || ||||||||||||||||| || |||||||||||| ||||| |||| ||||||    
T  30935489 acccccggtccaccagagaaacactgtagccaaccaaaacaataatgccgctagacgccaactcccaatctcgaagcaaaat-aaccggcccatcagaat 30935587  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaa-aagc-aagctagaatgacacacaccctcaaa 317  Q
    ||||||||||| | |||||||  |  |||||||||||||| | ||||||| |||| | ||||||| || ||||  |||| ||| |||||||||| |||||    
T  30935588 ccagcacacaacaagtaagacggatgacatgatttgcggttgagcaaacaacaatcacaaaggaaaaagaagctcagctcgaaggacacacaccttcaaa 30935687  T
Q  318 accaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataa 387  Q
    | |||| |||| || || |||||| |||||||||  || || ||| |||||  | |||||||||||||||    
T  30935688 a-caccctaaacaccttaacaacctaaaactcaaataaaagctagtgacaacaagtatggacccgaataa 30935756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 47945788 - 47945585
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| |||||||| |||||| ||||| ||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||    
T  47945788 aagcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcacccctt 47945689  T
Q  123 accccc-agcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcc 221  Q
    ||||||  | |||||||||||      |  ||||||| ||||| || |||||||||||||||||||| ||||||| ||| |||||| | |||||||||||    
T  47945688 accccctggtccaccagagaa-----tgttagccaaacaagaatgctgctagacgccaactcccgatctcgaagctaaagtaaccggcacaccagaatcc 47945594  T
Q  222 agcacacaa 230  Q
    |||||||||    
T  47945593 agcacacaa 47945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 1652885 - 1653286
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  ||||||||||  |||| |||||||||||||||| |||| ||||||   | ||||||||| || |||| || ||| | ||    
T  1652885 aagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaaggacactcatt 1652984  T
Q  123 acccccagccc-accagagaa--accgtagccagccaaataagaaagcagctaga-cgccaactcccgatttcgaagcaaaattaaccgacccaccagaa 218  Q
    |||||| |  | |||||||||  || |||||  |||||| || || |  |||| | |||||||||||||| | |||||||||| || || |||| |||||    
T  1652985 accccccggtcgaccagagaaccactgtagctcgccaaacaaaaatgttgctaaaacgccaactcccgatcttgaagcaaaat-aatcggcccatcagaa 1653083  T
Q  219 tccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagca-agctagaatgacacacaccctcaaa 317  Q
    | |||||||||||| |||||||| ||| ||||||||||| | | |||||||||| | ||||||||| ||||||  |||| |||||||| |||||||||||    
T  1653084 ttcagcacacaataagtaagacagacagcatgatttgcgatagagcaaacatcagtcaaaaaggaa-aaaagctcagcttgaatgacagacaccctcaaa 1653182  T
Q  318 accaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccac 417  Q
    || ||  |||| ||  | |||||| ||||||||| |||||| ||||||||| || |||||||||||||||||||| |  ||||||| || ||||| ||||    
T  1653183 ac-actctaaacaccataacaacctaaaactcaaacaagagctagcgacaacgagtatggacccgaataacagaggcaacctccaatagaaatcatccac 1653281  T
Q  418 aacaa 422  Q
    |||||    
T  1653282 aacaa 1653286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 27399040 - 27398787
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  ||||| ||||| |||| || |||||||| ||||||||    |||||  ||||  ||||| ||  ||| |||||||| |     
T  27399040 aagcccaaaaccaaacttgaaccaaataactgactcctgacctcgaatctaaagcgattgtgccaccagactttcggaccaaaatagaagggcacccatc 27398941  T
Q  123 acccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
     | ||  | |||| ||||||||  | |||||||||||| ||||  | |||||||| | |||||||||| ||||||||||| |||| |   ||||||||||    
T  27398940 tcgcctggtccactagagaaacaccatagccagccaaacaagattgtagctagacacaaactcccgatctcgaagcaaaaataactggtgcaccagaatc 27398841  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaat 274  Q
    |||||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  27398840 cagcacacaatatgtaagacaatcaacatgatatgcagtggtgcaaacatcaat 27398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 25594519 - 25594781
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||| |||| ||||  |||||||| |  || ||||||| |||||||||||||||  ||||||  |||| |||||| ||  ||| ||||||||| |    
T  25594519 aagcccaaagccaatcttgaaccaaagaattaacttccgatctagaatcaaaagcgatctacccaccagacttgaggaccaaaatagaagggcaccccat 25594618  T
Q  123 acccccagcccaccagagaaac-cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcc 221  Q
    |||||| | || |||||||||  |  |||||| | || ||||    ||| |||| |||| ||||||| |||||| |||| ||| || |||| ||||||||    
T  25594619 acccccggtccgccagagaaaatcaaagccagtctaacaagatgatagccagacaccaagtcccgatctcgaagaaaaagtaatcggcccatcagaatcc 25594718  T
Q  222 agcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaa 284  Q
    |||| |||||| |||||||| || ||||||   |||||||||||||||||||| |||||||||    
T  25594719 agcatacaataagtaagacagacgacatgaaaagcggtggtgcaaacatcaatcaaaaaggaa 25594781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 5556653 - 5556449
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||  ||||||  ||| || |||| || || | |||||||||     
T  5556653 aagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcacccca 5556554  T
Q  122 tacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
     || | | | |||| ||||||||  ||||||||| |||| ||||    |||||||| |||||| ||||| ||||| ||||| |||||| |||||| ||||    
T  5556553 aacactcggtccacgagagaaacatcgtagccagacaaacaagatgttagctagacaccaacttccgatctcgaatcaaaagtaaccggcccacctgaat 5556454  T
Q  220 ccagc 224  Q
    |||||    
T  5556453 ccagc 5556449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 23328349 - 23328565
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||| ||||| | |||||| |||||| | ||  ||||||||||||||||||||| |||| | ||||| ||||| || ||| || ||   ||||||||||     
T  23328349 aagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctc 23328448  T
Q  123 acccccagcccaccagagaa-accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcc 221  Q
     ||||| |  |||||||||| ||| || | || |||| || |  |||||||||| |||||||||||| |||||||||||  ||||| |||| | ||  ||    
T  23328449 gcccccggtacaccagagaacaccatatcaagtcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacacc 23328546  T
Q  222 agcacacaatatgtaagac 240  Q
    |||||||||||||||||||    
T  23328547 agcacacaatatgtaagac 23328565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 37123464 - 37123366
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| |||  ||||||||||| ||||| ||||||||||||||| |||| ||||||| || || |||||| || || | ||||||||||    
T  37123464 aagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccct 37123366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 270
Target Start/End: Original strand, 823431 - 823683
Alignment:
Q  20 aataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccc 119  Q
    |||||||||||||| |||||||    ||| ||||| ||| ||||||||||||||||| |||| |||||     |||||  ||| ||   || ||||||||    
T  823431 aataagcccaaaacaaaacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccc 823530  T
Q  120 cttacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccaga 217  Q
     |||||| | | |||||||||||||  | || | ||||||| ||||  ||| |||||| |||||||| ||| | ||||||||||||||||  ||||||||    
T  823531 tttacccacggtccaccagagaaacaccataacaagccaaacaagattgcaactagacaccaactcctgatcttgaagcaaaattaaccggtccaccaga 823630  T
Q  218 atccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacat 270  Q
    ||||| |   |||  |||||| ||  | ||||||||| |||||||||||||||    
T  823631 atccaacctgcaaattgtaaggcaatcgacatgatttacggtggtgcaaacat 823683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 17551039 - 17550973
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  17551039 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 17550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 19176584 - 19176518
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  19176584 aagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 19176518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 39021275 - 39021341
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    ||||||||||||| |||||  ||||||||||| ||||||| ||||||||||||| |||| |||||||    
T  39021275 aagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacc 39021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 14879514 - 14879421
Alignment:
Q  27 ccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccc 119  Q
    ||||||||||| ||||  |||| |||| | ||||||||||||||||||||| |||| |||||||  |||| ||||||||| |||| ||||||||    
T  14879514 ccaaaaccaaaacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 20611719 - 20611645
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||| ||| ||||| | |||| ||||||||||||  || |||||||||||||||||||||    
T  20611719 gcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaaccagcacacaatatgtaagac 20611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 14194024 - 14193924
Alignment:
Q  23 aagcccaaaaccaaa--cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccc 120  Q
    |||||||||||||||  |||| |||||||||| | ||||| ||||||||||||||| |||| | || ||  |||| |||||| || |||| |||||||||    
T  14194024 aagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccc 14193925  T
Q  121 t 121  Q
    |    
T  14193924 t 14193924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 2392651 - 2392725
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| | ||||| |||| ||||| |||| |  || |||||||||||||||||||||    
T  2392651 gcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaatatgtaagac 2392725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 2394398 - 2394472
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| | ||||| |||| ||||| |||| |  || |||||||||||||||||||||    
T  2394398 gcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaatatgtaagac 2394472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 9584052 - 9584110
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    |||||||||| | | |||| | |||||||||| ||||||||||||||||||||| ||||    
T  9584052 aagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatc 9584110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 40023715 - 40023789
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| |||||| ||||| ||||||||||| ||||||  ||||| ||  |||  ||||||||||||||||    
T  40023715 gcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccggacaccaatacacaatatgtaagac 40023789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 43012457 - 43012399
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    |||| ||||| | |||||| | |||||||||| ||||||||||||||||||||| ||||    
T  43012457 aagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatc 43012399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 14755285 - 14755330
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    ||||||||||| |||||||||| |||||||||| |||| |||||||    
T  14755285 ccaaagaactgactcccgatcttgaatcaaaagtgatcggcccacc 14755330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 30127319 - 30127286
Alignment:
Q  48 agaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||| ||||||||||||||||||||||||||    
T  30127319 agaactgactcccgatctcgaatcaaaagcgatc 30127286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 33143969 - 33144006
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  33143969 ccaaagaactgactcccgatctcgaatcaaaagtgatc 33144006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 20611865 - 20611801
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagccca 87  Q
    |||||||||| | |||||  | |||||||||| ||||||||||||||||||||  |||| |||||    
T  20611865 aagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggccca 20611801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 281
Target Start/End: Complemental strand, 13311920 - 13311660
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctta 123  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||||||| |||| |||||||  ||| || |||| ||||||||||||||||||||    
T  13311920 agcccaacacctaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcacccctta 13311821  T
Q  124 cccccagcccaccagagaaac--cgtagccag-ccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
     |||| | |||||||||||||  || || ||| | ||||||||| |||| ||||| |||||||||||| |||||| |||| ||  || ||||||||||||    
T  13311820 tccccggtccaccagagaaacaacgaagtcagtcaaaataagaatgcagttagacaccaactcccgatctcgaaggaaaagtactcggcccaccagaatc 13311721  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaag 281  Q
    |||||||||| |||||||||| || |  ||||  |||||||||||||||||||| ||||||    
T  13311720 cagcacacaaaatgtaagacagacgaactgataagcggtggtgcaaacatcaatcaaaaag 13311660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 288
Target Start/End: Original strand, 11379125 - 11379392
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| ||||  |||||| |||| |||||||||||||||||||||||||| || ||||  ||| || |||| ||  ||| |||||||||     
T  11379125 aagcccaaaaccaaaacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacccca 11379224  T
Q  122 tacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
     |||| | | |||||||||||||  ||||| |||||||| ||||  | |||||||| |||||||||||| | ||| ||||| |||||||||||| |||||    
T  11379225 aaccctcggtccaccagagaaacaccgtagtcagccaaacaagattgtagctagacaccaactcccgatcttgaatcaaaaataaccgacccactagaat 11379324  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaa 288  Q
    ||||||||||| |  | ||||| | |||||| ||||| ||||||||||||||||| |||||||||||||    
T  11379325 ccagcacacaa-aaatgagacagataacatgttttgcagtggtgcaaacatcaatcaaaaaggaacaaa 11379392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 47457021 - 47457233
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||| ||| ||||||| |||||||||||| ||||| ||||| |||||||||||||| | ||| |  ||||||||||| || ||||||||||||||||    
T  47457021 aagcccataactaaacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacctaatcagacgggcacccctt 47457120  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    ||||||   |||||||||||      || ||||||| ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| ||||||||||||||    
T  47457121 acccccgatccaccagagaa-----tgctagccaaacaagaatgcagccagacgccaactcccgatctcgaatcaaaagtatccggcccaccagaatcca 47457215  T
Q  223 gcacacaatatgtaagac 240  Q
    |||||||| | |||||||    
T  47457216 gcacacaaaaagtaagac 47457233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 51 - 319
Target Start/End: Complemental strand, 38485610 - 38485341
Alignment:
Q  51 actggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaaccgta-- 148  Q
    |||| ||||||||||||||||||||| |||| |||||||  ||||||| ||  |  |||| ||||||||||||||||||| |||||||||||||  ||      
T  38485610 actgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccagagaaacactata 38485511  T
Q  149 gccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaaca 248  Q
    |||| ||||| || || || |||||| | ||||||| ||  |||||||||||| | | | |||| || |||||||||||||||| |||||||| || ||     
T  38485510 gccaaccaaacaataatgccgctagatgtcaactcc-gaactcgaagcaaaatgatcgg-cccatcaaaatccagcacacaataagtaagacagacgacg 38485413  T
Q  249 tgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaac 319  Q
    ||| ||||||||| |||||||||||| |||| |||| ||||||  |||| ||| |||||||||||| |||||    
T  38485412 tgacttgcggtggagcaaacatcaatcaaaagggaaaaaaagctcagctcgaaggacacacacccttaaaac 38485341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 414
Target Start/End: Complemental strand, 9107209 - 9106852
Alignment:
Q  59 ccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaac--cgtagccagcca 156  Q
    ||||| |||||||||||| ||||  ||||||  |||||| |||| ||  | ||||| |||| | |||||  | |||||| ||||||  | ||||||| ||    
T  9107209 ccgatgtcgaatcaaaagagatcgtcccaccagacttcatgaccaaatgatacgggaacccatcacccctggtccaccaaagaaacaccatagccaggca 9107110  T
Q  157 aataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgc 256  Q
    || ||||  | |||||||| |||||| || || ||||||||||| | |    ||||||| ||||||||||||||||||||| ||| |  ||||||||||     
T  9107109 aacaagattgtagctagactccaactaccaatctcgaagcaaaagtgattagcccaccaaaatccagcacacaatatgtaacacaaatcacatgatttgt 9107010  T
Q  257 ggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaaccaccataaatacattcacaacccaaaactcaagcaa 355  Q
    |||||||||||||||||| ||||||||| |||  |  | || ||| ||||| ||||||| ||| |||| |||| || || ||| || ||||||||| |||    
T  9107009 ggtggtgcaaacatcaatcaaaaaggaaaaaattctcatctggaaggacacccaccctc-aaagcaccctaaacaccttaacaccctaaaactcaaacaa 9106911  T
Q  356 gaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacc 414  Q
    ||| ||||||| | ||| ||||||| ||||||||||| ||||||| ||||| |||||||    
T  9106910 gagctagcgacgacgaaaatggacctgaataacagaggcggcctctaaaagaaatcacc 9106852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 291
Target Start/End: Original strand, 46133283 - 46133546
Alignment:
Q  29 aaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttaccccc 128  Q
    |||||||||||||  ||| ||||||| ||||||||||| |||||||||||||| || ||||  ||||||| ||| || |||| |||||| ||| ||| ||    
T  46133283 aaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcactcctaacctcc 46133382  T
Q  129 agcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcac 226  Q
     | |||||||||||||  || ||||| ||||| || || ||   || || |||||||||||| || ||||||||| | | | |||| |||||||||||||    
T  46133383 ggtccaccagagaaacaccgaagccaaccaaacaataatgccattaaactccaactcccgatctcaaagcaaaatga-ctggcccatcagaatccagcac 46133481  T
Q  227 acaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc 291  Q
    || ||| | |||||  ||||| ||| |||| || | |||||||||||| |||| |||| ||||||    
T  46133482 actataagcaagaccaacaacgtgacttgcagttgagcaaacatcaatcaaaagggaaaaaaagc 46133546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 12480968 - 12480890
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggac 101  Q
    ||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  12480968 aagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggac 12480890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 269
Target Start/End: Original strand, 42533258 - 42533499
Alignment:
Q  30 aaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttaccccca 129  Q
    |||||||||||  ||||||| | || ||||||||||||||||||||| ||||||||||||  |||| |||||| || |||  |||||||||| ||||||     
T  42533258 aaaccaaacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccg 42533357  T
Q  130 gcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcaca 227  Q
       ||||||||||  |||  | |  |||||||||||| |||||| ||| |  ||||||||| ||||||||||| |||||| |||| | ||  ||||||||    
T  42533358 atgcaccagagaaacaccacatcgcgccaaataagaatgcagctggacacagactcccgatctcgaagcaaaagtaaccggcccatcggagaccagcaca 42533457  T
Q  228 caatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||| | ||| |||| || ||| ||  | ||||||||||||||    
T  42533458 caaaaagtatgacaaacgacaagagatacggtggtgcaaaca 42533499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 3478434 - 3478329
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||| || |||| |||||||||||  ||||||||||||||||||||| |||| ||||||| ||||| |||||| || |||| ||||||||||     
T  3478434 aagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctc 3478335  T
Q  123 accccc 128  Q
    ||||||    
T  3478334 accccc 3478329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 8745235 - 8744987
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||||||  |||| ||||||  |||||||||||||||||||| |||| |||||||  | || |||||| || |||| || |||||||     
T  8745235 aagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctc 8745136  T
Q  123 acccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||| | |  ||||||||||  |||  | |   ||||| || |  |||||||||| ||  || ||||| ||||||||||| |||||| ||||||  || |    
T  8745135 accctcggtgcaccagagaaacaccagatcacaccaaacaacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaac 8745036  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    |||||||||| | | | |||| || ||||||| ||||||||||||||||    
T  8745035 cagcacacaaaaagcatgacaaacgacatgatatgcggtggtgcaaaca 8744987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 24324796 - 24324895
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||||||||||||  |||| ||||||| ||||| | |||| || |||| ||||||||||    
T  24324796 aagcccaaaaccaaaacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccct 24324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 241
Target Start/End: Original strand, 6716738 - 6716955
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||| ||| |||  |||| | ||   || |||| |||||||||| ||     
T  6716738 cccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcact 6716837  T
Q  126 cccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccag 223  Q
    | | |  ||||||||||||  |  | | ||||||||||||  |||||||||| || ||||||||| || ||| |||| |||| | ||||||  || ||||    
T  6716838 ctcggtacaccagagaaacatcaaatcaagccaaataagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccag 6716937  T
Q  224 cacacaatatgtaagaca 241  Q
    ||| ||| | ||||||||    
T  6716938 cacgcaaaaagtaagaca 6716955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 34390044 - 34389829
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||  |||||||| ||| ||||||||||||||||||||| |||| |||||||  |||| |  ||| || |||  |||||| |||     
T  34390044 aagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctc 34389945  T
Q  123 acccccagcccaccagagaa-accgtagccag-ccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    ||||||||  |||||||||| ||| || | || | ||| | ||  ||| |||||| |||||| | ||| ||||||||||| |||| | |||| ||||  |    
T  34389944 acccccagtacaccagagaacaccatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagacac 34389845  T
Q  221 cagcacacaatatgta 236  Q
    ||||||||||||||||    
T  34389844 cagcacacaatatgta 34389829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 37794936 - 37794865
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaa 237  Q
    |||||||||| |||||||||||| ||||||| |||| ||||| ||||||  || ||||||||||||||||||    
T  37794936 gcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaa 37794865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 3419655 - 3419721
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||    
T  3419655 aagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccacc 3419721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 3867198 - 3867132
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||||||| |||||| |||||||||||||| ||||||||||||    
T  3867198 aagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccacc 3867132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 9428105 - 9428247
Alignment:
Q  24 agcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctta 123  Q
    ||||||| |||||||| |  || |||||||| || | |||||||||||||||| |||| || ||||  ||| ||||||| ||||| || |||||| || |    
T  9428105 agcccaagaccaaactagaaccgaagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaaccaaacaggcacctctaa 9428204  T
Q  124 cccccagcccaccagagaa-accgtagccagccaaataagaaa 165  Q
    |||| || ||||||||||| | ||||||| |||||| ||||||    
T  9428205 cccctagtccaccagagaataacgtagcccgccaaacaagaaa 9428247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 38306343 - 38306124
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||| | |||||| | |||||||||| ||||| ||||||||||||||| |||| |||||||  |||  || ||| ||  ||  ||||||||||     
T  38306343 aagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctc 38306244  T
Q  123 acccccagcccaccagag--aaaccgtagccagccaaa-taagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
     ||||| |  ||||||||  |||||  | | || ||||  ||||  |||||||||| || ||||||| | ||||||| |||| ||||| ||||||  ||     
T  38306243 gccccctgtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaa 38306144  T
Q  220 ccagcacacaatatgtaaga 239  Q
    ||||||||||||||||||||    
T  38306143 ccagcacacaatatgtaaga 38306124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 5860287 - 5860354
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccg 90  Q
    |||||||||| | |||||| | ||||||| || |||||||||||||||||||||||||  ||||||||    
T  5860287 aagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccg 5860354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 12480664 - 12480581
Alignment:
Q  339 acccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| |||| ||| ||||||  ||| |||| | |||||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  12480664 accctaaacacaaacaagagtaagcaacaacggatatggacccgaataacaaaggcggcctccaaaagaaatcactcacaacaa 12480581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 1320877 - 1320771
Alignment:
Q  23 aagcccaaaaccaaa-cttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||||||||||||| |||| |||||||||||| || ||||| | |||||||||| |||| |||||||  |||| | |||| || || | ||||||||||    
T  1320877 aagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccct 1320778  T
Q  122 taccccc 128  Q
     ||||||    
T  1320777 caccccc 1320771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 6584991 - 6584925
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||  |||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  6584991 aagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccacc 6584925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 10244260 - 10244198
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||| | |||||| | |||||||||| ||||||||||||||||||||| |||| |||||||    
T  10244260 ccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 10244198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 47325884 - 47325950
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| | |||||| | |||||| ||| ||||||||||| |||||||||||||| |||||||    
T  47325884 aagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccacc 47325950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 48058657 - 48058711
Alignment:
Q  27 ccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    ||||||||||||||| |||||| ||||| || |||||||| ||||||||||||||    
T  48058657 ccaaaaccaaacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatc 48058711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 29647633 - 29647556
Alignment:
Q  336 acaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcac 413  Q
    ||||| |||||||||| | | || ||||||||| ||||||| ||  ||||||||||| ||||||||||||| ||||||    
T  29647633 acaactcaaaactcaaaccaaagttagcgacaacgaatatgaacgtgaataacagaggcggcctccaaaagaaatcac 29647556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 3867050 - 3866979
Alignment:
Q  168 agctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||| || |||| |||| ||||||||||| ||| ||||||||| ||| |||| ||||||||||||||||    
T  3867050 agctagaccccgactctcgatctcgaagcaaaagtaatcgacccacc-gaaaccaggacacaatatgtaagac 3866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 23983274 - 23983198
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacc 102  Q
    |||||||||||||||| || || ||| || |||||||||||||||||||| |||||  ||||||  |||||| ||||    
T  23983274 cccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagacc 23983198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 35745826 - 35745890
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagccca 87  Q
    |||||||||| | |||||| ||||||||  || || |||||||||||||||||| ||||||||||    
T  35745826 aagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagccca 35745890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 16954590 - 16954487
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgca 265  Q
    |||||||||| ||||||| |||| | ||||||||| ||| || |||| | ||| |||||||||| || ||| |||| || ||| ||| ||| ||||||||    
T  16954590 gcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacacagtaagtatgacaaacgacaagatatgcagtggtgca 16954491  T
Q  266 aaca 269  Q
    ||||    
T  16954490 aaca 16954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 422
Target Start/End: Original strand, 46133576 - 46133659
Alignment:
Q  339 acccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| |||||||| | |||| ||||||||| || ||||||||||||||| |||| ||| | |||| || ||||||||| |||||    
T  46133576 accctaaactcaaaccagagctagcgacaacgagtatggacccgaataatagaggcggtcaccaatagaaatcacccataacaa 46133659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 3419801 - 3419875
Alignment:
Q  166 gcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    |||||||||| || ||||||||| ||||||| |||| ||||| | | ||  || |||||||||||||||||||||    
T  3419801 gcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaaccagcacacaatatgtaagac 3419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 9349831 - 9349765
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||| ||||||||  ||  |||| || ||||||||||||||||||||| |||| |||||||    
T  9349831 aagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccacc 9349765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 26386207 - 26386245
Alignment:
Q  56 ctcccgatctcgaatcaaaagcgatcagcccaccgaact 94  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  26386207 ctcccgatctcgaatcaaaagcgatcggaccaccgaact 26386245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 47326033 - 47326103
Alignment:
Q  169 gctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaaga 239  Q
    ||||||| || ||||||||| ||||||| |||| ||||| |||| |  || ||||||||||||||||||||    
T  47326033 gctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaatatgtaaga 47326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 33435178 - 33435133
Alignment:
Q  36 aacttgggccaaagaactggctcccgatctcgaatcaaaagcgatc 81  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatc 33435133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 5860447 - 5860507
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    ||||||||| ||||||| |||| ||||| |||| |  || |||||||||||||||||||||    
T  5860447 actcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaatatgtaagac 5860507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 12480818 - 12480727
Alignment:
Q  172 agacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgc 264  Q
    |||| ||| |||||||| |||||||||||| || || |||||||  ||||| ||||||| | |||||||| ||  ||||||||||||| ||||    
T  12480818 agacaccagctcccgatctcgaagcaaaat-aatcggcccaccaacatccaacacacaaaaggtaagacaaacggcatgatttgcggttgtgc 12480727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 36449168 - 36449045
Alignment:
Q  20 aataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccc 119  Q
    |||||| |||||||  ||||||  ||||||||||| ||||  ||||||||| |||| |||| |||||||   |||||| || | || |||| ||||||||    
T  36449168 aataagtccaaaacataacttgaaccaaagaactgactcctaatctcgaat-aaaaacgataagcccactagacttcaagatcaaatcagaagggcaccc 36449070  T
Q  120 cttacccccagcccaccagagaaac 144  Q
    || ||||||   |||||||||||||    
T  36449069 ctcacccccgatccaccagagaaac 36449045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 37795071 - 37795019
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaa 75  Q
    |||||||||| | ||||||   |||||||||| ||||||||||||||||||||    
T  37795071 aagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaa 37795019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 422
Target Start/End: Complemental strand, 12794197 - 12793796
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagc-gatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    ||||| ||||| |||||||| || |||||||| |||| ||||||||||||||||  |||| ||||||   |||| || ||| || |||| || |||||||    
T  12794197 aagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacacccct 12794098  T
Q  122 tacccccagcccaccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    ||||||  |  ||| ||||||||  | |||||| |||||  | || |  | ||||| |||||||||||| |||||||||||  | |||||||| ||||||    
T  12794097 tacccctggttcactagagaaacaccatagccaaccaaacgataatgttgttagactccaactcccgatctcgaagcaaaagga-ccgacccatcagaat 12793999  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagc-aagctagaatgacacacaccctcaaaa 318  Q
    ||||||||||||| |||||||| |  |||||||||| ||||| ||||| |||||| ||||||||| ||||||  | || ||| |||||||||||||||||    
T  12793998 ccagcacacaataagtaagacaaatgacatgatttgaggtggagcaaatatcaatcaaaaaggaaaaaaagctcaactcgaaggacacacaccctcaaaa 12793899  T
Q  319 ccaccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccaca 418  Q
     ||||  ||| || || |||||||| |||| || |||||| ||| ||||| || ||||||||||||||||| || || ||||||| || |||||||||||    
T  12793898 -cacccaaaacaccttaacaacccacaacttaaacaagagctagggacaacgagtatggacccgaataacaaaggcgacctccaatagaaatcacccaca 12793800  T
Q  419 acaa 422  Q
    ||||    
T  12793799 acaa 12793796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 32935327 - 32935587
Alignment:
Q  12 gaacactgaataagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagac 111  Q
    ||||||| || ||| |||||| |||||||| | | |||||||| |||||||||||||||||||||||||| |||||||  ||||||||||| || ||||     
T  32935327 gaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaa 32935426  T
Q  112 gggcaccccttacccccagcccaccagagaa--accgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgac 209  Q
    ||| |||||| ||||||   ||| || ||||  ||| || | ||||||| ||||  |||||||||| |||||| | ||| || |||||||| ||||||||    
T  32935427 gggaacccctcacccccgatccatcatagaaacaccataacaagccaaagaagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgac 32935526  T
Q  210 ccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaat 274  Q
    ||||| ||||||||||||||||||||||||  |    |||||| || ||||||||||||||||||    
T  32935527 ccaccggaatccagcacacaatatgtaagatgt----catgatatgtggtggtgcaaacatcaat 32935587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 241
Target Start/End: Original strand, 33968624 - 33968832
Alignment:
Q  35 aaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagccca 134  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||  |||||   ||| ||  ||| || |||| || |||||| ||||| | |  ||    
T  33968624 aaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccataccctcggttca 33968723  T
Q  135 ccagagaaac--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaata 232  Q
    ||||||||||  |||||||| ||||| |||||  ||| |||||||||||| ||||| ||| ||||||| |||||||||||||| ||| ||||| | ||||    
T  33968724 ccagagaaacaccgtagccaaccaaacaagaatacagttagacgccaacttccgatctcggagcaaaagtaaccgacccaccaaaattcagcatataata 33968823  T
Q  233 tgtaagaca 241  Q
     ||||||||    
T  33968824 agtaagaca 33968832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 267
Target Start/End: Complemental strand, 9224123 - 9223878
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    |||||||||||||||  ||  ||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||| |   | | |||||||| |     
T  9224123 aagcccaaaaccaaaactgaaccaaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggcaccc-tc 9224025  T
Q  123 acccccagcccaccagagaaac--cgtagccagccaaat-aagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    |||||| | |||||| || |||  |  || | | ||||  ||||  ||||  |||| |||||||||||| |||||||||||| ||||| |||||||| ||    
T  9224024 acccccggtccaccaaaggaacaccaaagtcggtcaaaacaagattgcagaaagacaccaactcccgatctcgaagcaaaat-aaccggcccaccagcat 9223926  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaa 267  Q
    ||| ||||||| | ||||||||  |||||||||||||||||| |||||    
T  9223925 ccatcacacaaaaagtaagacaatcaacatgatttgcggtggagcaaa 9223878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 422
Target Start/End: Original strand, 13098570 - 13098948
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||| ||||||||||||| |||||||||||  ||||| |||| |||||| ||| ||||    |||   |||||||||| |||||||| |||||||||||    
T  13098570 aagccaaaaaccaaacttgagccaaagaactaactcccaatcttgaatcagaagagatcgttgcactagacttcaggactcaaccagatgggcacccctt 13098669  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    |||||  | |||||| ||||    || ||| ||| | ||||| |||||||||||||||||||| || ||||||||||| |||||| |||| |||||| ||    
T  13098670 accccg-gtccaccaaagaa----ta-ccatccagacaagaatgcagctagacgccaactcccaatctcgaagcaaaagtaaccggcccatcagaatgca 13098763  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagca-agctagaatgacacacaccctcaaaacca 321  Q
    |||||||| | |||||||             ||||||||| ||||||||||||||||| ||||||  ||  |||| ||| |||||||  |||||| |  |    
T  13098764 gcacacaaaaagtaagac-------------tgcggtggtacaaacatcaataaaaaacgaacaagtgctcagctcgaaggacacac--cctcaacaa-a 13098847  T
Q  322 ccataaatacattcacaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaaca 421  Q
    || ||||||   |   | |||||||||||| ||||||||| |||||| ||||| || |||||||| ||||| ||  | |||||||||||||||| |||||    
T  13098848 ccctaaatatcctagtatcccaaaactcaaacaagaggtatcgacaacgaataaggtcccgaatagcagaggcgatcaccaaaaggaatcaccctcaaca 13098947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 422
Target Start/End: Complemental strand, 15944080 - 15943707
Alignment:
Q  44 ccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaa 143  Q
    |||| |||||| |||| || ||| ||||||||| |||| || |||| ||||||| |||| | |   ||| ||||||| |||| |  | ||||||||||||    
T  15944080 ccaaggaactgactccagaactctaatcaaaagtgatcggctcaccaaacttcaagaccaatctgaacgtgcaccccatacctctggtccaccagagaaa 15943981  T
Q  144 c--cgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagaca 241  Q
    |  ||||| || ||||  || || |||  ||||| |||||||||||| | |||||||||||||||| |||||||| ||||| ||     || |||||||     
T  15943980 caccgtagtcaaccaataaaaaatgcaattagactccaactcccgatcttgaagcaaaattaaccggcccaccagcatccaaca-----taagtaagact 15943886  T
Q  242 tacaacatgatttgcggtggtgcaaacatcaataaaaaaggaacaaaagcaagctagaatgacacacaccctcaaaaccaccataaatacattcacaacc 341  Q
     || ||| |||||||||||||| |||||||||||||||| |||||||    ||||   | ||| | |||||| ||||| ||  |||  |  || |||||     
T  15943885 gacgacaagatttgcggtggtgtaaacatcaataaaaaaagaacaaagctcagctcagaggactcgcacccttaaaac-acgttaagcaacttaacaact 15943787  T
Q  342 caaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| |||||  ||||| ||||||||| |||||| |||| ||||| ||||| | |||||||||||||| ||||||||||||    
T  15943786 caaacctcaaa-aagagatagcgacaacgaatatcgacctgaataccagaggcagcctccaaaaggaaacacccacaacaa 15943707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 269
Target Start/End: Original strand, 20701802 - 20702050
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||||| |||| || ||||   ||  | |||| || |||| ||||||||||     
T  20701802 aagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctc 20701901  T
Q  123 acccccagcccaccagag--aaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatc 220  Q
    |||||| |  ||||||||  |||||  | |  |||||| ||    |||||||||| || | ||||||| || |||||||| |||||| |||| | ||| |    
T  20701902 acccccggtacaccagagaaaaaccaaatcacgccaaacaaatttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaac 20702001  T
Q  221 cagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    || ||||||| | ||| |||| |||||| |||  ||||| |||||||||    
T  20702002 catcacacaaaaagtaggacaaacaacaagatacgcggtagtgcaaaca 20702050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 422
Target Start/End: Original strand, 26535021 - 26535104
Alignment:
Q  339 acccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| |||| ||| ||||||  ||||||||   ||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  26535021 accctaaacacaaacaagagtaagcgacaacagatatggacccgaataacagaggcggtctccacaaggaatcacccacaacaa 26535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 21266195 - 21266129
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||||||||  ||| | ||||  |||||||||||||||||||||||||| |||||||    
T  21266195 aagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccacc 21266129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 13423548 - 13423479
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaa 92  Q
    ||||||| ||||||||||| |||||||||| | ||| ||||||||||||||||| |||| | ||||||||    
T  13423548 aagcccataaccaaacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccaccgaa 13423479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 269
Target Start/End: Original strand, 3880623 - 3880830
Alignment:
Q  64 ctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacccccagcccaccagagaaac--cgtagccagccaaataa 161  Q
    ||||||||||||| |||| ||||||| ||||| |||||| || |||| ||||||| || |||| | |   |||||||||||  |  | |  |||||| ||    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaacaa 3880722  T
Q  162 gaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtgg 261  Q
    || ||||||||||| || ||||||||| || |||||||| |||| | |||||| ||| |||||| |||| | ||  |||| |  ||||||| || |||||    
T  3880723 gatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaaaaagtctgacaaaggacatgatatgtggtgg 3880822  T
Q  262 tgcaaaca 269  Q
    ||||||||    
T  3880823 tgcaaaca 3880830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 26534715 - 26534797
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaa---ctggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacc 102  Q
    |||||||||||||||||||  ||||||||   ||| ||||| ||||||||||||||| |||| |||||||  |||||||||||    
T  26534715 aagcccaaaaccaaacttgaaccaaagaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggacc 26534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 422
Target Start/End: Complemental strand, 9223798 - 9223721
Alignment:
Q  344 aaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||| ||| ||||||  |||||||| ||||||| |||||||||| ||| | |||||||||||||||||||||| |||||    
T  9223798 aaacccaaacaagagacagcgacaacgaatatg-acccgaataaaagaaatggcctccaaaaggaatcacccataacaa 9223721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 26216018 - 26216084
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccacc 89  Q
    |||||||||||||||  ||  || |||||||| ||||||||||||||||||||| |||| |||||||    
T  26216018 aagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 26216084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 21265068 - 21265003
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccac 88  Q
    |||||||||||||||||||  ||| | ||||  |||||||||||||||||||||| ||| ||||||    
T  21265068 aagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagctatcggcccac 21265003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 34105468 - 34105424
Alignment:
Q  50 aactggctcccgatctcgaatcaaaagcgatcagcccaccgaact 94  Q
    ||||| ||||||||||||||||||||| |||| ||||||| ||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccaccaaact 34105424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 19465 - 19216
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||| |||||||  |||| |||||| || |||| ||||||||||     
T  19465 aagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc 19366  T
Q  123 acccccagcccaccagagaaac--cgtagccagcc-aaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaat 219  Q
    |||    |   |||||||||||  |  |   |||| ||| ||||| |||||||||| || ||||||||| ||||||||||||||||||||||| | | |     
T  19365 acctttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgacccatcgggaa 19266  T
Q  220 ccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    |||||| ||||   |||||||| || |||||||    |||||||||||||    
T  19265 ccagcatacaaacagtaagacaaacgacatgatagatggtggtgcaaaca 19216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 269
Target Start/End: Original strand, 42140 - 42386
Alignment:
Q  26 cccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcaccccttacc 125  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||||| |||| |||||||  |||| |||||  || |||| |||||||||| |||    
T  42140 cccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacc 42239  T
Q  126 cccagcccaccagagaaac--cgtagccagccaaat-aagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
        |   |||||||||||  |  |   |||||||  ||||| ||||||||||  | ||||||||| ||||||||||||||||||||||| | | | |||    
T  42240 tttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaacca 42339  T
Q  223 gcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    ||| ||||   |||||||| || |||||||    |||||||||||||    
T  42340 gcatacaaacagtaagacaaacgacatgatagatggtggtgcaaaca 42386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 6344 - 6262
Alignment:
Q  340 cccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaaggaatcacccacaacaa 422  Q
    |||||||||||| ||||||||| |||||| ||||| || |||||||| ||||| ||| | |||||||||||||||| ||||||    
T  6344 cccaaaactcaaacaagaggtatcgacaacgaataaggtcccgaatagcagaggcggtcaccaaaaggaatcaccctcaacaa 6262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 6640 - 6429
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccctt 122  Q
    ||||| ||||||||||||| |||||||||||  || || |||| |||||||||| ||||    ||||  |||||||||| |||||||| |||||||||||    
T  6640 aagccaaaaaccaaacttgagccaaagaactaactaccaatcttgaatcaaaagagatcgttgcaccagacttcaggactcaaccagatgggcacccctt 6541  T
Q  123 acccccagcccaccagagaaaccgtagccagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatcca 222  Q
    | || | | |||||||| ||      |||| ||| | ||||| |||||||||| ||||||||| || || |||||||| |||||  |||| |||||| ||    
T  6540 a-cctcggtccaccagataa-----tgccatccagacaagaatgcagctagacaccaactcccaatctcaaagcaaaagtaacctgcccatcagaatgca 6447  T
Q  223 gcacacaatatgtaagac 240  Q
     ||||||| | |||||||    
T  6446 acacacaaaaagtaagac 6429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 71660 - 71556
Alignment:
Q  170 ctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    |||||| ||||||||| || ||||| ||||| ||||||  |||||||||||||||| ||||| |||||||||    |||||||||||  |||| ||||||    
T  71660 ctagacaccaactccctatctcgaaccaaaagtaaccggtccaccagaatccagcagacaatttgtaagacaatagacatgatttgcaatggtacaaaca 71561  T
Q  270 tcaat 274  Q
    |||||    
T  71560 tcaat 71556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 46856 - 46786
Alignment:
Q  336 acaacccaaaactcaagcaagaggtagcgacaaggaatatggacccgaataacagagacggcctccaaaag 406  Q
    |||| ||||||||||| |||||| ||||||| | | ||||||||||||||||||||| |||||| ||||||    
T  46856 acaatccaaaactcaaacaagagctagcgacgacggatatggacccgaataacagaggcggccttcaaaag 46786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 47024 - 46921
Alignment:
Q  170 ctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatgatttgcggtggtgcaaaca 269  Q
    |||||| ||||||| | || ||||| ||||| ||||||  |||||||||||||||| ||||| | ||||||| | ||||||||||||  |||| ||||||    
T  47024 ctagacaccaactcactatctcgaaccaaaagtaaccggtccaccagaatccagcagacaatttttaagaca-ataacatgatttgcaatggtacaaaca 46926  T
Q  270 tcaat 274  Q
    |||||    
T  46925 tcaat 46921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 59571 - 59448
Alignment:
Q  151 cagccaaataagaaagcagctagacgccaactcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagacatacaacatg 250  Q
    |||||||| ||||  ||| ||| || |||||||||||| || |||||||| |||  | |||||||||||| |||| ||||| |||||||||    |||||    
T  59571 cagccaaacaagattgcaactaaacaccaactcccgatctcaaagcaaaagtaattggcccaccagaatctagcagacaatttgtaagacaatagacatg 59472  T
Q  251 atttgcggtggtgcaaacatcaat 274  Q
    |||| |  |||| |||||||||||    
T  59471 attttcaatggtacaaacatcaat 59448  T

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Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 36767 - 36691
Alignment:
Q  45 caaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacccaaccagacgggcacccct 121  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||  |||| |||||| || |||| ||||||||||    
T  36767 caaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccct 36691  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 35931 - 35991
Alignment:
Q  180 actcccgatttcgaagcaaaattaaccgacccaccagaatccagcacacaatatgtaagac 240  Q
    ||||||||| ||||||| |||| ||||| ||||||  || |||||||||||||||||||||    
T  35931 actcccgatctcgaagccaaatgaaccggcccaccgaaagccagcacacaatatgtaagac 35991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 58209 - 58130
Alignment:
Q  23 aagcccaaaaccaaacttgggccaaagaactggctcccgatctcgaatcaaaagcgatcagcccaccgaacttcaggacc 102  Q
    ||||| |||||||||||||  ||||| || || || ||||||| |||||||||| |||| ||||||| ||||| ||||||    
T  58209 aagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggacc 58130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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