View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13225_high_4 (Length: 238)
Name: NF13225_high_4
Description: NF13225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13225_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 3915143 - 3915364
Alignment:
| Q |
1 |
tcaaagttaaagtagaatttattcatacatgttaattaggtgcacttatacatatatcaaaatattaaggaatgattttaaatagtttctgttaacgtta |
100 |
Q |
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| T |
3915143 |
tcaaagttaaagtagaatttattcatacatgttaattaggtgcacttatacatatatcaaaatattaaggaatgattttaaatagtttatgttaacgtta |
3915242 |
T |
|
| Q |
101 |
tctaaggaaaacaaatatcatgttatgttataatgtacacgaaaattctttaagcacatataatgaacttcctagcttcctcaaaccagttatgctccag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
3915243 |
tctaaggaaaacaaatatcatgttatgttataatgtacacgaaaattctttaagcacatataatgaacttcctagcttcctccaaccagttatgctccag |
3915342 |
T |
|
| Q |
201 |
ggacaataagattatagcttgt |
222 |
Q |
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|||||||||||| ||||||||| |
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| T |
3915343 |
ggacaataagatcatagcttgt |
3915364 |
T |
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