View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13225_low_2 (Length: 453)
Name: NF13225_low_2
Description: NF13225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13225_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 11743301 - 11743016
Alignment:
| Q |
16 |
cacataaatggtgtggagagaagaacagatgcagtgaatatgatagtgactgcattaatgagagtcaagaaaaatattggagcaatgaatcaacaacaca |
115 |
Q |
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| T |
11743301 |
cacataaatggtgtggagagaagaacagatgcagtgaatatgatagtgactgcattaatgagagtcaagaaaaatattggagcaatgaatcaacaacaca |
11743202 |
T |
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| Q |
116 |
tacagtgacgttctgagatatgtcaaagggaaagactgagatgaaaagaaagcattaatggaaatggaaggtgcatttattgacttgtgcagtgtacgga |
215 |
Q |
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| T |
11743201 |
tacagtgacgttctgagatatgtcaaagggaaagactgagatgaaaagaaagcattaatggaaatggaaggtgcatttattgacttgtgcagtgtacgga |
11743102 |
T |
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| Q |
216 |
ctcattcagaaacttcatttttggccgcaagaagttaatatgatcaagaagggatggatacacacatcatgtaagatcaaggagaa |
301 |
Q |
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| T |
11743101 |
ctcattcagaaacttcatttttggccgcaagaagttaatatgatcaaggagggatggatacacacatcatgcaagatgaaggagaa |
11743016 |
T |
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