View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13226_high_15 (Length: 236)
Name: NF13226_high_15
Description: NF13226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13226_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 10980223 - 10980423
Alignment:
| Q |
17 |
atgaaccattgagcaaagataagaaaaggaaaaaacaaagaatgacccaccactagaaagttcacataagaaacaatatttatggtggtacaggtaaaat |
116 |
Q |
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| T |
10980223 |
atgaaccattgagcaaagataagaaaaggaaaaaacaaa-aatgacccaccactagaaagttcacataagaaacaatatttatggtggtacaggtaaaat |
10980321 |
T |
|
| Q |
117 |
tactatttcaacactgaacaataagtagacgtgaaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacaga |
216 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10980322 |
tactgtttcaacactgaacaataagtagacgtgaaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacaga |
10980421 |
T |
|
| Q |
217 |
ta |
218 |
Q |
| |
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|| |
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| T |
10980422 |
ta |
10980423 |
T |
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