View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13226_high_8 (Length: 403)
Name: NF13226_high_8
Description: NF13226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13226_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 32122290 - 32121916
Alignment:
| Q |
11 |
ttatactagacgaaaagtaagagacagatagagatagacataaacagtgttagtattttgatgtttaaataacacaactctacaataatgtattttttgc |
110 |
Q |
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| T |
32122290 |
ttatactagacgaaaagtaagagacaaatagagatagacataaacagtgttagtattttgatgtttaaataacacaactctacaataatgtattttttgc |
32122191 |
T |
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| Q |
111 |
ttctcgttttaaaagaaaacagtccttgcgaatttttgaaatcttttcaatggctctaaagtcataggtacattttttaaatcttttcaacagtcctcct |
210 |
Q |
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| T |
32122190 |
ttctcgttttaaaagaaaacagtccttgcgaatttttgaaatcttttcaatggctctaaagtcataggtacattttttaaatcttttcaacagtcctcct |
32122091 |
T |
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| Q |
211 |
agttgagcacatatttgcttcaactcatatcagaaattccttcttttttagctcctcaactttcatgtcttttatcaattctgaaggaaactttttcata |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32122090 |
agttgagcacatatttgcttcaactcatatcagaaattccttcttttttagctcctcaactttcatgtcttttatcaattctgaaggaaactttttcata |
32121991 |
T |
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| Q |
311 |
tgaattgcttaattgtttgtctgcttaacatggaaactcgttcgttgctccaactctcaatttcttctgctgagt |
385 |
Q |
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||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
32121990 |
tgaattgcttaattgtttgtctgcttaacgtggaaactcgtttgttgctccaactctcaatttcttctgctgagt |
32121916 |
T |
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