View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13229_high_9 (Length: 208)

Name: NF13229_high_9
Description: NF13229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13229_high_9
NF13229_high_9
[»] chr5 (10 HSPs)
chr5 (2-55)||(8545188-8545241)
chr5 (139-208)||(8545324-8545394)
chr5 (2-46)||(14052071-14052115)
chr5 (2-33)||(3945015-3945046)
chr5 (174-208)||(8527690-8527724)
chr5 (13-51)||(27488738-27488776)
chr5 (179-208)||(8635921-8635950)
chr5 (179-208)||(8643347-8643376)
chr5 (2-51)||(40293169-40293218)
chr5 (2-34)||(43222473-43222505)
[»] chr2 (7 HSPs)
chr2 (2-44)||(23914909-23914951)
chr2 (2-33)||(8785371-8785402)
chr2 (2-33)||(31126554-31126585)
chr2 (2-51)||(40859964-40860013)
chr2 (7-51)||(19317614-19317658)
chr2 (7-51)||(32217003-32217047)
chr2 (2-42)||(44019616-44019656)
[»] chr3 (8 HSPs)
chr3 (2-55)||(3503900-3503953)
chr3 (2-51)||(32758184-32758233)
chr3 (2-51)||(50098306-50098355)
chr3 (2-51)||(53995102-53995151)
chr3 (2-51)||(34995333-34995382)
chr3 (5-33)||(1148939-1148967)
chr3 (3-51)||(8845029-8845077)
chr3 (11-51)||(38870166-38870206)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-34)||(167560-167591)
[»] chr4 (5 HSPs)
chr4 (2-33)||(5902497-5902528)
chr4 (2-37)||(12728579-12728614)
chr4 (2-51)||(42906307-42906356)
chr4 (4-37)||(49308396-49308429)
chr4 (2-30)||(43028084-43028112)
[»] chr1 (4 HSPs)
chr1 (2-53)||(9848522-9848573)
chr1 (2-47)||(12174493-12174538)
chr1 (7-52)||(42470277-42470322)
chr1 (2-42)||(4790381-4790421)
[»] chr8 (3 HSPs)
chr8 (2-51)||(1351851-1351901)
chr8 (2-30)||(8137487-8137515)
chr8 (2-42)||(34968248-34968288)
[»] chr7 (5 HSPs)
chr7 (2-51)||(24862629-24862678)
chr7 (1-42)||(32806709-32806750)
chr7 (2-51)||(36924417-36924465)
chr7 (2-42)||(18802611-18802651)
chr7 (2-50)||(45883893-45883941)
[»] chr6 (1 HSPs)
chr6 (2-51)||(14690802-14690851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-34)||(351015-351047)


Alignment Details
Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 8545188 - 8545241
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcattatcac 55  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8545188 attttaatcaaaatttcataaaaactatcgtttatagtttacacgcattatcac 8545241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 8545324 - 8545394
Alignment:
Q  139 ttattgatttggctagttgttatttttgnnnnnnn-tacaaatctcattttaggatgcaaatgatgtcttt 208  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  8545324 ttattgatttggctagttgttatttttgaaaaaaaatacaaatctcattttaggatgcaaatgatgtcttt 8545394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14052115 - 14052071
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacg 46  Q
    |||||||||||||||| |||||||  |||||||||||||||||||    
T  14052115 attttaatcaaaattttataaaaaaaattgtttatagtttacacg 14052071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 3945046 - 3945015
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtt 33  Q
    ||||||||||||||||||||||||||||||||    
T  3945046 attttaatcaaaatttcataaaaactattgtt 3945015  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 8527724 - 8527690
Alignment:
Q  174 tacaaatctcattttaggatgcaaatgatgtcttt 208  Q
    |||||||||||||||| ||||||||||||||||||    
T  8527724 tacaaatctcattttaagatgcaaatgatgtcttt 8527690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 27488776 - 27488738
Alignment:
Q  13 aatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  27488776 aatttcataaaaactattgttcataatttacacgcatta 27488738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 8635950 - 8635921
Alignment:
Q  179 atctcattttaggatgcaaatgatgtcttt 208  Q
    ||||||||||||||||||||||||||||||    
T  8635950 atctcattttaggatgcaaatgatgtcttt 8635921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 8643376 - 8643347
Alignment:
Q  179 atctcattttaggatgcaaatgatgtcttt 208  Q
    ||||||||||||||||||||||||||||||    
T  8643376 atctcattttaggatgcaaatgatgtcttt 8643347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 40293169 - 40293218
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||||||||||||||||| |||||||| || |||| | ||||||    
T  40293169 attttaatcaaaatttcataaaaattattgtttgtaatttatatgcatta 40293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43222473 - 43222505
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgttt 34  Q
    |||||||||||| ||||||||||||||||||||    
T  43222473 attttaatcaaagtttcataaaaactattgttt 43222505  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 23914909 - 23914951
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttaca 44  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  23914909 attttaatcaaaatttcataaaaaatattgtttataatttaca 23914951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 8785371 - 8785402
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtt 33  Q
    ||||||||||||||||||||||||||||||||    
T  8785371 attttaatcaaaatttcataaaaactattgtt 8785402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 31126585 - 31126554
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtt 33  Q
    ||||||||||||||||||||||||||||||||    
T  31126585 attttaatcaaaatttcataaaaactattgtt 31126554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 40859964 - 40860013
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||| ||||||||||||  || |||| ||||||||    
T  40859964 attttaatcaaaatttcattaaaactattgttcgtaatttatacgcatta 40860013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 19317658 - 19317614
Alignment:
Q  7 aatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||    
T  19317658 aatcaaaatttcataaaaaacattgtttataatttacacacatta 19317614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 32217047 - 32217003
Alignment:
Q  7 aatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||    
T  32217047 aatcaaaattgcataaaaaatattgtttataatttatacgcatta 32217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 44019616 - 44019656
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagttta 42  Q
    ||||||||||| |||||||||||||||||||| ||| ||||    
T  44019616 attttaatcaatatttcataaaaactattgttgataattta 44019656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 3503953 - 3503900
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcattatcac 55  Q
    |||||||| ||||| |||||||||||| |||| |||||||| ||||||||||||    
T  3503953 attttaataaaaatctcataaaaactaatgttcatagtttatacgcattatcac 3503900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 32758233 - 32758184
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||||||||||||||||| ||||||||||| |||| | ||||||    
T  32758233 attttaatcaaaatttcataaaaaatattgtttataatttatatgcatta 32758184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 50098355 - 50098306
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||| ||||||||||||| ||||||||||||||| |||| ||||||||    
T  50098355 attttattcaaaatttcatataaactattgtttataatttatacgcatta 50098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 53995151 - 53995102
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||||||||||| ||||| || |||| ||||||||    
T  53995151 attttaatcaaaatttcataaaaactactgtttgtaatttatacgcatta 53995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 34995382 - 34995333
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||||||| |||||||| ||| |||| || |||||    
T  34995382 attttaatcaaaatttcataaaagctattgttcataatttatacccatta 34995333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 1148939 - 1148967
Alignment:
Q  5 ttaatcaaaatttcataaaaactattgtt 33  Q
    |||||||||||||||||||||||||||||    
T  1148939 ttaatcaaaatttcataaaaactattgtt 1148967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 8845077 - 8845029
Alignment:
Q  3 ttttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||||||||||| ||| ||| |||| | ||||||    
T  8845077 ttttaatcaaaatttcataaaaactatcgttcataatttatatgcatta 8845029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 38870206 - 38870166
Alignment:
Q  11 aaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  38870206 aaaatttcatataaaatattgttaatagtttacacgcatta 38870166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 167591 - 167560
Alignment:
Q  3 ttttaatcaaaatttcataaaaactattgttt 34  Q
    ||||||||||||||||||||||||||||||||    
T  167591 ttttaatcaaaatttcataaaaactattgttt 167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000004; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 5902497 - 5902528
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtt 33  Q
    ||||||||||||||||||||||||||||||||    
T  5902497 attttaatcaaaatttcataaaaactattgtt 5902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 12728579 - 12728614
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttata 37  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12728579 attttaatcgaaatttcataaaaactattgtttata 12728614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 42906356 - 42906307
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||| |||||||||||||||||||||||||| || |||| | ||||||    
T  42906356 attttagtcaaaatttcataaaaactattgtttgtaatttatatgcatta 42906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 49308396 - 49308429
Alignment:
Q  4 tttaatcaaaatttcataaaaactattgtttata 37  Q
    ||||||| ||||||||||||||||||||||||||    
T  49308396 tttaatctaaatttcataaaaactattgtttata 49308429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 43028112 - 43028084
Alignment:
Q  2 attttaatcaaaatttcataaaaactatt 30  Q
    |||||||||||||||||||||||||||||    
T  43028112 attttaatcaaaatttcataaaaactatt 43028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000004; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 9848522 - 9848573
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcattatc 53  Q
    |||||||||||||||||||||||| |||||||| || ||||  |||||||||    
T  9848522 attttaatcaaaatttcataaaaattattgtttgtaatttatgcgcattatc 9848573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 12174538 - 12174493
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgc 47  Q
    |||||||||||||||| ||||||||||||||| ||| |||| ||||    
T  12174538 attttaatcaaaatttgataaaaactattgttcataatttatacgc 12174493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 42470322 - 42470277
Alignment:
Q  7 aatcaaaatttcataaaaactattgtttatagtttacacgcattat 52  Q
    ||||||||||||||||||| |||||||| || |||| |||||||||    
T  42470322 aatcaaaatttcataaaaattattgtttgtaatttaaacgcattat 42470277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 4790381 - 4790421
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagttta 42  Q
    ||||| |||||||||||||||||| ||||||||||| ||||    
T  4790381 attttgatcaaaatttcataaaaaatattgtttataattta 4790421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 1351851 - 1351901
Alignment:
Q  2 attttaatcaaaatttcat-aaaaactattgtttatagtttacacgcatta 51  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||||||||    
T  1351851 attttaatcaaaatttcataaaaaattattgtttgtaatttacacgcatta 1351901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 8137515 - 8137487
Alignment:
Q  2 attttaatcaaaatttcataaaaactatt 30  Q
    |||||||||||||||||||||||||||||    
T  8137515 attttaatcaaaatttcataaaaactatt 8137487  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 34968288 - 34968248
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagttta 42  Q
    ||||||||||||||||| ||||||||||||| |||| ||||    
T  34968288 attttaatcaaaatttcttaaaaactattgtatataattta 34968248  T

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Target: chr7 (Bit Score: 30; Significance: 0.00000007; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 24862629 - 24862678
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||| ||||||| ||||||||||||||||||| |||| || |||||    
T  24862629 attttaattaaaattttataaaaactattgtttataatttatacacatta 24862678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32806709 - 32806750
Alignment:
Q  1 tattttaatcaaaatttcataaaaactattgtttatagttta 42  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||    
T  32806709 tattttaatcaaaatttcataaaaattattgttcataattta 32806750  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 36924465 - 36924417
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  36924465 attttaatcaaaatttcataaaaa-tattatttataatttatacgcatta 36924417  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 18802611 - 18802651
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagttta 42  Q
    |||||||| |||||||||||||||||||||||  |||||||    
T  18802611 attttaattaaaatttcataaaaactattgttcgtagttta 18802651  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 45883941 - 45883893
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatt 50  Q
    |||||||||||||||||||||||| ||||||| ||  |||| |||||||    
T  45883941 attttaatcaaaatttcataaaaaatattgttcatgatttatacgcatt 45883893  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 14690851 - 14690802
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgtttatagtttacacgcatta 51  Q
    |||||||||||||||||||||| |||| | |||||| |||| ||||||||    
T  14690851 attttaatcaaaatttcataaacactactatttataatttatacgcatta 14690802  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 351015 - 351047
Alignment:
Q  2 attttaatcaaaatttcataaaaactattgttt 34  Q
    |||||||||||||||||||||||| ||||||||    
T  351015 attttaatcaaaatttcataaaaattattgttt 351047  T

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