View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1322_high_26 (Length: 260)
Name: NF1322_high_26
Description: NF1322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1322_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 48676088 - 48676306
Alignment:
| Q |
30 |
aatagcacatgtcttctctttacaaaaatcaaactcaaaagctttgaacattttctagttaaattaaattttgtcgaccattagtgattgtcccttcctt |
129 |
Q |
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| T |
48676088 |
aatagcacatgtcttctctttacaaaaatcaaactcaaaagctttgaacattttctagttaaattaaattttgtcgaccattagtgattgtcccttcctt |
48676187 |
T |
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| Q |
130 |
gaaaacgattagcaagtacaaaaacaccacacttatcttaaacagtagctaaagctaacatcttatcctatcatcaaagagagggtcctatttaacttta |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48676188 |
gaaaacgattagcaagtacaaaaacaccacacttatcttaaacagtagctaaatctaacatcttatcctatcatcaaagagagggtcctatttaacttta |
48676287 |
T |
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| Q |
230 |
ctgataatcaactacttca |
248 |
Q |
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||||||||||||||||||| |
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| T |
48676288 |
ctgataatcaactacttca |
48676306 |
T |
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