View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1322_low_19 (Length: 315)
Name: NF1322_low_19
Description: NF1322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1322_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 16067810 - 16068088
Alignment:
| Q |
16 |
atgtgcaaatttgacttagataggtcgatatttcactagtcaaacccactagctagcatgttttatatattagttcatta---------aagttaatcta |
106 |
Q |
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| T |
16067810 |
atgtgcaaatttgacttagataggtcgatatttcactagtcaaacccactagctagcatgttttatatattagttcattataaagaattaagttaatcta |
16067909 |
T |
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| Q |
107 |
tactctaaccatatgcaattgttagtacttatgatcttattttacttatctctatactctattgattatttattctaattcatagtttgattcaacttag |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
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| T |
16067910 |
tactctaaccatatgcaattgttagtacttatgatcttattttacttatctctatactctattgattatttattctaattcttagtttgattcaaattag |
16068009 |
T |
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| Q |
207 |
ctctttatttattgtgtcaaatggtcatgcatgttttaacctattaagaatgttggcgtacccatcatttctcccacat |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16068010 |
ctctttatttattgtgtcaaatggtcatgcatgttttaacctattaagaatgttggcgtacccatcatttctcccacat |
16068088 |
T |
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