View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1322_low_39 (Length: 251)
Name: NF1322_low_39
Description: NF1322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1322_low_39 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 51866921 - 51867159
Alignment:
| Q |
1 |
tatgataaacaccaaaagagagagtttcgactgcaaatgaccaactatttacactacttgtatagcaaatattaatgcatttcaacaaagatgagagatt |
100 |
Q |
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| T |
51866921 |
tatgataaacaccaaaagagagagtttcgactgcaaatgaccaactatttacactacttgtatagcaaatatttatgcatttcaacaaagatgagagatt |
51867020 |
T |
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| Q |
101 |
ttcttgtaattatggatgtaaaactagggtatactacctcttatctgatccttgaagaaaactcaaaaagttcattgtaaagtcaaatgtcaaatactag |
200 |
Q |
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| T |
51867021 |
ttcttgtaattatggatgtaaaactagggtatactacctcttatctgatccttgaagaaaactcaaaaagttcattgtaaagtcaaatgtcaaatactag |
51867120 |
T |
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| Q |
201 |
gtaaagtcaaatgttaataccaggtattccaaatagaat |
239 |
Q |
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| T |
51867121 |
gtaaagtcaaatgttaataccaggtattccaaatagaat |
51867159 |
T |
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