View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13230_high_7 (Length: 340)
Name: NF13230_high_7
Description: NF13230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13230_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 33359619 - 33359904
Alignment:
| Q |
1 |
gttttttgtgagaaataatttttcgatttaaaatacttaaataattaaagactgcaaaacccttctataaagaaaattgaaaaattgaattgtaaatatt |
100 |
Q |
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| T |
33359619 |
gttttttgtgagaaataatttttcgatttaaaatccttaaataattaaagactgcaaaacccttctataaagaaaattgaaaaattgaattgtaaatatt |
33359718 |
T |
|
| Q |
101 |
ctagtgacattggattggcccgatcaccacactcacctatggccgctaatcctctctcttgttaatttccgataacca-ttggattggaccgttttttct |
199 |
Q |
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|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
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| T |
33359719 |
ctagtgacattgaattggaccgatcaccacactcacctatggccgctaatcctctctcttgttaatttctgataaccatttggattggaccgttttttct |
33359818 |
T |
|
| Q |
200 |
ctttgtggtgtctgtatttaacttcttaattatagaactcaattatcatccaagggacactcaaaattaaaaagaggataaggtta |
285 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33359819 |
ctttgtggtgtgtgtatttaacttcttaattatagaactcaattatcatccaagggacactcaaaattaaaaagaggataaggtta |
33359904 |
T |
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