View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13230_low_10 (Length: 246)

Name: NF13230_low_10
Description: NF13230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13230_low_10
NF13230_low_10
[»] chr2 (57 HSPs)
chr2 (58-208)||(1926486-1926636)
chr2 (136-231)||(2324441-2324536)
chr2 (136-231)||(32884074-32884169)
chr2 (136-231)||(2324207-2324302)
chr2 (136-229)||(17854953-17855046)
chr2 (136-231)||(27897628-27897722)
chr2 (136-231)||(29718295-29718390)
chr2 (135-231)||(28407815-28407911)
chr2 (136-231)||(19191632-19191727)
chr2 (136-231)||(13486300-13486396)
chr2 (135-231)||(37769965-37770061)
chr2 (136-231)||(5509280-5509375)
chr2 (136-231)||(17854714-17854809)
chr2 (136-231)||(36316073-36316168)
chr2 (136-231)||(40149025-40149120)
chr2 (138-231)||(5509048-5509141)
chr2 (134-231)||(40379466-40379563)
chr2 (136-228)||(2029736-2029828)
chr2 (136-196)||(27036469-27036529)
chr2 (136-231)||(15124570-15124665)
chr2 (136-231)||(16419469-16419564)
chr2 (136-231)||(17719367-17719462)
chr2 (136-231)||(37840304-37840399)
chr2 (136-231)||(40379231-40379326)
chr2 (136-231)||(40718229-40718324)
chr2 (136-231)||(5711461-5711556)
chr2 (136-210)||(4662198-4662272)
chr2 (164-228)||(2029999-2030063)
chr2 (135-231)||(14466432-14466528)
chr2 (136-220)||(37812531-37812615)
chr2 (136-231)||(8424855-8424950)
chr2 (136-231)||(24396067-24396162)
chr2 (168-230)||(17525361-17525423)
chr2 (167-228)||(14927291-14927352)
chr2 (151-231)||(9927893-9927973)
chr2 (167-231)||(16533545-16533609)
chr2 (136-192)||(21591748-21591804)
chr2 (136-220)||(37812301-37812385)
chr2 (136-231)||(5711697-5711792)
chr2 (180-231)||(31008593-31008644)
chr2 (134-231)||(31222485-31222583)
chr2 (136-222)||(33606085-33606171)
chr2 (136-221)||(94052-94137)
chr2 (136-201)||(3738900-3738965)
chr2 (136-231)||(31700767-31700865)
chr2 (136-208)||(36351971-36352043)
chr2 (171-231)||(36352181-36352241)
chr2 (168-231)||(11020557-11020620)
chr2 (168-231)||(25082559-25082622)
chr2 (164-206)||(14927097-14927139)
chr2 (164-222)||(19544402-19544459)
chr2 (12-41)||(1926650-1926679)
chr2 (178-231)||(17719575-17719628)
chr2 (136-196)||(25313570-25313631)
chr2 (136-221)||(40149260-40149343)
chr2 (136-220)||(93156-93239)
chr2 (168-231)||(5851703-5851767)
[»] chr4 (71 HSPs)
chr4 (132-231)||(53828545-53828644)
chr4 (136-231)||(1518131-1518226)
chr4 (136-231)||(20821940-20822035)
chr4 (136-231)||(21498762-21498857)
chr4 (136-231)||(53814951-53815046)
chr4 (136-231)||(21498321-21498416)
chr4 (136-231)||(53828311-53828406)
chr4 (136-231)||(54054827-54054922)
chr4 (136-231)||(35788861-35788956)
chr4 (136-222)||(54055064-54055149)
chr4 (134-231)||(14783209-14783306)
chr4 (136-231)||(12869051-12869146)
chr4 (136-231)||(25052819-25052914)
chr4 (136-208)||(980095-980167)
chr4 (136-220)||(5846346-5846430)
chr4 (136-227)||(5846113-5846204)
chr4 (136-231)||(9685599-9685694)
chr4 (136-231)||(35819150-35819245)
chr4 (136-231)||(40717463-40717558)
chr4 (135-231)||(22863440-22863536)
chr4 (136-231)||(9685365-9685460)
chr4 (136-231)||(11036768-11036863)
chr4 (136-231)||(28245548-28245643)
chr4 (136-231)||(39902585-39902680)
chr4 (151-231)||(2463789-2463868)
chr4 (135-231)||(50543589-50543685)
chr4 (136-231)||(2516168-2516261)
chr4 (140-231)||(22827509-22827600)
chr4 (136-231)||(35788626-35788721)
chr4 (136-231)||(35796764-35796859)
chr4 (164-231)||(52559562-52559629)
chr4 (134-231)||(9279192-9279289)
chr4 (135-231)||(21684964-21685060)
chr4 (136-228)||(22231098-22231190)
chr4 (167-231)||(22845469-22845533)
chr4 (136-220)||(27634114-27634198)
chr4 (148-231)||(2261775-2261858)
chr4 (164-231)||(22231330-22231397)
chr4 (169-228)||(28246110-28246169)
chr4 (136-231)||(35796999-35797094)
chr4 (140-231)||(44118881-44118972)
chr4 (152-231)||(53814696-53814775)
chr4 (134-220)||(27634549-27634635)
chr4 (177-230)||(25324056-25324109)
chr4 (156-208)||(16066052-16066104)
chr4 (168-231)||(400587-400650)
chr4 (168-231)||(5398234-5398296)
chr4 (168-231)||(50543352-50543415)
chr4 (147-221)||(7806613-7806687)
chr4 (168-226)||(7892547-7892605)
chr4 (177-231)||(25323820-25323874)
chr4 (167-229)||(27464272-27464334)
chr4 (136-185)||(11103964-11104013)
chr4 (174-231)||(12005491-12005548)
chr4 (136-201)||(31254459-31254524)
chr4 (177-230)||(35609513-35609566)
chr4 (177-230)||(35609734-35609787)
chr4 (147-220)||(52559782-52559855)
chr4 (167-231)||(34358052-34358116)
chr4 (136-231)||(6218406-6218501)
chr4 (164-231)||(11036533-11036600)
chr4 (168-231)||(35645787-35645850)
chr4 (184-231)||(53559312-53559359)
chr4 (168-231)||(53699026-53699089)
chr4 (169-231)||(12869285-12869347)
chr4 (134-231)||(11783814-11783911)
chr4 (138-231)||(37836049-37836142)
chr4 (136-201)||(40717258-40717323)
chr4 (171-231)||(5398498-5398557)
chr4 (171-231)||(6218206-6218266)
chr4 (165-201)||(30566086-30566122)
[»] chr7 (60 HSPs)
chr7 (136-231)||(17202146-17202241)
chr7 (136-231)||(34027360-34027455)
chr7 (136-231)||(34027594-34027689)
chr7 (136-231)||(2544469-2544564)
chr7 (136-231)||(18826510-18826605)
chr7 (136-231)||(26562095-26562190)
chr7 (134-228)||(36206088-36206182)
chr7 (147-231)||(40746243-40746327)
chr7 (136-231)||(2544237-2544332)
chr7 (136-231)||(6001457-6001552)
chr7 (136-231)||(6634822-6634917)
chr7 (136-231)||(21861496-21861591)
chr7 (138-231)||(31257053-31257146)
chr7 (136-231)||(3392949-3393044)
chr7 (136-231)||(21054975-21055070)
chr7 (164-231)||(25620131-25620198)
chr7 (136-231)||(40746465-40746560)
chr7 (136-206)||(4267821-4267891)
chr7 (137-231)||(26028983-26029077)
chr7 (136-196)||(4268021-4268081)
chr7 (135-231)||(29469571-29469667)
chr7 (167-231)||(36277248-36277312)
chr7 (167-231)||(48243459-48243523)
chr7 (148-231)||(31257289-31257372)
chr7 (168-231)||(48243083-48243146)
chr7 (140-226)||(10882032-10882118)
chr7 (137-231)||(44874368-44874462)
chr7 (135-231)||(47710409-47710505)
chr7 (135-231)||(47722065-47722161)
chr7 (136-231)||(29469807-29469902)
chr7 (136-231)||(48661577-48661672)
chr7 (136-196)||(2404231-2404291)
chr7 (171-231)||(3038106-3038166)
chr7 (167-231)||(21821804-21821868)
chr7 (135-231)||(21861260-21861356)
chr7 (168-231)||(26239938-26240001)
chr7 (136-231)||(43688182-43688276)
chr7 (142-231)||(32879636-32879726)
chr7 (169-231)||(42985145-42985207)
chr7 (171-231)||(23839099-23839159)
chr7 (177-233)||(40898735-40898791)
chr7 (136-231)||(46452599-46452695)
chr7 (136-231)||(1596561-1596655)
chr7 (136-231)||(1596795-1596890)
chr7 (136-231)||(31892354-31892449)
chr7 (168-231)||(36277013-36277076)
chr7 (168-231)||(36993096-36993159)
chr7 (164-231)||(43075332-43075399)
chr7 (164-231)||(43085559-43085626)
chr7 (164-231)||(43089230-43089297)
chr7 (169-231)||(10903085-10903147)
chr7 (177-231)||(20305685-20305739)
chr7 (136-201)||(3519777-3519842)
chr7 (177-229)||(1793754-1793806)
chr7 (168-208)||(4454775-4454815)
chr7 (179-231)||(11211701-11211752)
chr7 (171-231)||(23796206-23796266)
chr7 (167-231)||(31485446-31485510)
chr7 (167-231)||(31485681-31485745)
chr7 (177-229)||(47849798-47849850)
[»] chr6 (48 HSPs)
chr6 (136-231)||(19712919-19713014)
chr6 (136-231)||(21690689-21690784)
chr6 (136-231)||(27656425-27656520)
chr6 (136-231)||(28867979-28868074)
chr6 (135-231)||(27772680-27772776)
chr6 (136-231)||(8026356-8026451)
chr6 (136-231)||(27772913-27773008)
chr6 (135-231)||(27653183-27653279)
chr6 (136-228)||(7915817-7915910)
chr6 (136-231)||(4868599-4868694)
chr6 (136-231)||(17147682-17147777)
chr6 (136-231)||(33494506-33494601)
chr6 (136-230)||(15600903-15600997)
chr6 (138-231)||(13740885-13740978)
chr6 (138-231)||(13746385-13746478)
chr6 (138-231)||(30256782-30256874)
chr6 (135-231)||(6542965-6543061)
chr6 (135-231)||(13353167-13353263)
chr6 (167-231)||(16722829-16722893)
chr6 (136-231)||(2736424-2736519)
chr6 (136-231)||(2737192-2737287)
chr6 (136-231)||(2753225-2753320)
chr6 (136-231)||(4868835-4868930)
chr6 (148-231)||(5572406-5572489)
chr6 (136-231)||(9705221-9705316)
chr6 (136-231)||(33796293-33796388)
chr6 (138-231)||(25065116-25065209)
chr6 (171-231)||(11721907-11721967)
chr6 (174-230)||(19712719-19712775)
chr6 (168-231)||(3680011-3680074)
chr6 (136-231)||(5572638-5572732)
chr6 (148-231)||(11085560-11085643)
chr6 (136-231)||(12330313-12330407)
chr6 (136-231)||(15081930-15082025)
chr6 (136-231)||(24554084-24554179)
chr6 (167-231)||(9705018-9705082)
chr6 (171-231)||(12329966-12330026)
chr6 (164-220)||(15102964-15103020)
chr6 (136-231)||(2736189-2736284)
chr6 (168-231)||(12330201-12330264)
chr6 (167-225)||(6400874-6400932)
chr6 (169-231)||(30256578-30256640)
chr6 (179-231)||(6054413-6054465)
chr6 (167-231)||(6400642-6400706)
chr6 (136-231)||(4906773-4906868)
chr6 (187-231)||(8026622-8026666)
chr6 (167-231)||(19639135-19639199)
chr6 (136-231)||(33494741-33494837)
[»] chr8 (71 HSPs)
chr8 (135-231)||(17469784-17469880)
chr8 (136-231)||(17477032-17477127)
chr8 (136-231)||(19256608-19256703)
chr8 (136-231)||(39743496-39743591)
chr8 (135-231)||(19256842-19256938)
chr8 (136-231)||(24075328-24075423)
chr8 (130-231)||(42846627-42846729)
chr8 (140-231)||(4828039-4828130)
chr8 (140-231)||(4828264-4828355)
chr8 (136-231)||(34842645-34842740)
chr8 (136-231)||(34843084-34843179)
chr8 (141-231)||(26800534-26800624)
chr8 (135-231)||(7267487-7267583)
chr8 (136-231)||(20702763-20702859)
chr8 (136-231)||(24532443-24532538)
chr8 (136-231)||(39052951-39053046)
chr8 (137-231)||(39984782-39984876)
chr8 (136-231)||(39960158-39960254)
chr8 (136-231)||(12547066-12547160)
chr8 (136-231)||(35682803-35682898)
chr8 (139-229)||(12688277-12688367)
chr8 (167-231)||(38447449-38447513)
chr8 (136-231)||(5931971-5932066)
chr8 (136-231)||(11232216-11232311)
chr8 (136-231)||(16050228-16050322)
chr8 (135-231)||(11232451-11232547)
chr8 (136-231)||(35385833-35385929)
chr8 (136-231)||(15042692-15042787)
chr8 (148-231)||(16050008-16050091)
chr8 (136-231)||(34653118-34653212)
chr8 (177-231)||(38476285-38476339)
chr8 (136-189)||(19472314-19472367)
chr8 (136-189)||(19543239-19543292)
chr8 (136-189)||(19589404-19589457)
chr8 (167-231)||(8929015-8929079)
chr8 (136-231)||(5590390-5590485)
chr8 (136-231)||(10449967-10450062)
chr8 (168-231)||(12317045-12317108)
chr8 (176-231)||(18939319-18939374)
chr8 (136-231)||(28069379-28069474)
chr8 (136-199)||(39984883-39984946)
chr8 (136-223)||(41790626-41790713)
chr8 (177-231)||(38475755-38475809)
chr8 (166-223)||(42584671-42584728)
chr8 (136-231)||(3157581-3157677)
chr8 (171-231)||(5932206-5932266)
chr8 (167-231)||(37001462-37001526)
chr8 (136-231)||(422239-422334)
chr8 (168-231)||(5675756-5675819)
chr8 (136-231)||(20301228-20301323)
chr8 (167-226)||(20515142-20515201)
chr8 (136-231)||(21087860-21087955)
chr8 (180-231)||(27204975-27205026)
chr8 (180-231)||(27205073-27205124)
chr8 (180-231)||(27205171-27205222)
chr8 (177-231)||(22638201-22638255)
chr8 (177-231)||(37001234-37001288)
chr8 (168-233)||(422473-422538)
chr8 (167-231)||(3157349-3157413)
chr8 (164-221)||(4873723-4873779)
chr8 (165-226)||(6463188-6463249)
chr8 (167-220)||(7729939-7729992)
chr8 (167-223)||(10884062-10884119)
chr8 (171-228)||(20094819-20094876)
chr8 (135-228)||(25325612-25325705)
chr8 (177-222)||(37867863-37867908)
chr8 (136-201)||(39052589-39052654)
chr8 (168-208)||(7669640-7669680)
chr8 (171-231)||(8716116-8716176)
chr8 (167-231)||(18004118-18004182)
chr8 (177-229)||(42049711-42049763)
[»] chr5 (64 HSPs)
chr5 (136-231)||(21209943-21210038)
chr5 (136-231)||(8098285-8098379)
chr5 (136-231)||(27133015-27133110)
chr5 (136-231)||(95288-95383)
chr5 (136-231)||(19522288-19522382)
chr5 (164-231)||(24531594-24531661)
chr5 (136-231)||(42295546-42295641)
chr5 (138-231)||(9368799-9368892)
chr5 (136-231)||(8081135-8081231)
chr5 (136-228)||(8098518-8098610)
chr5 (164-231)||(6413448-6413515)
chr5 (136-231)||(13296859-13296954)
chr5 (136-231)||(41666779-41666874)
chr5 (136-231)||(41667015-41667110)
chr5 (171-231)||(17015901-17015961)
chr5 (136-231)||(2063756-2063850)
chr5 (136-231)||(18333487-18333582)
chr5 (136-231)||(24346523-24346618)
chr5 (136-231)||(24487667-24487762)
chr5 (168-231)||(24528539-24528602)
chr5 (136-231)||(29909509-29909604)
chr5 (161-234)||(19522079-19522152)
chr5 (136-208)||(6637804-6637876)
chr5 (135-231)||(9368561-9368657)
chr5 (136-227)||(17352461-17352551)
chr5 (164-231)||(28510086-28510153)
chr5 (164-231)||(35167417-35167484)
chr5 (136-231)||(38731625-38731720)
chr5 (149-231)||(20225021-20225103)
chr5 (138-231)||(8287771-8287863)
chr5 (167-231)||(24270127-24270191)
chr5 (167-231)||(24346759-24346823)
chr5 (136-231)||(29909743-29909839)
chr5 (136-223)||(13296640-13296727)
chr5 (168-231)||(15438876-15438939)
chr5 (168-231)||(15480321-15480384)
chr5 (136-231)||(19705870-19705965)
chr5 (136-231)||(24269893-24269987)
chr5 (177-231)||(60095-60149)
chr5 (177-231)||(7369732-7369786)
chr5 (136-213)||(6637570-6637646)
chr5 (179-231)||(15590183-15590236)
chr5 (136-221)||(33337270-33337355)
chr5 (142-230)||(2061961-2062049)
chr5 (136-231)||(13700611-13700707)
chr5 (171-231)||(25258323-25258383)
chr5 (171-231)||(25322113-25322173)
chr5 (167-231)||(43117880-43117944)
chr5 (136-231)||(3859330-3859425)
chr5 (138-201)||(13701120-13701183)
chr5 (167-231)||(15480555-15480621)
chr5 (136-207)||(17150279-17150350)
chr5 (136-231)||(20510664-20510759)
chr5 (148-195)||(24487553-24487600)
chr5 (184-231)||(25258116-25258163)
chr5 (184-231)||(25321906-25321953)
chr5 (177-231)||(170573-170627)
chr5 (169-231)||(6919451-6919512)
chr5 (177-231)||(26137131-26137185)
chr5 (136-206)||(30770096-30770166)
chr5 (135-231)||(33337477-33337569)
chr5 (136-176)||(21209764-21209804)
chr5 (179-231)||(21306897-21306949)
chr5 (179-231)||(21314735-21314787)
[»] chr3 (55 HSPs)
chr3 (136-231)||(20327871-20327966)
chr3 (136-231)||(1723098-1723192)
chr3 (136-231)||(8018935-8019030)
chr3 (136-231)||(11589752-11589847)
chr3 (136-229)||(23691216-23691309)
chr3 (136-229)||(23708016-23708109)
chr3 (136-229)||(23726472-23726565)
chr3 (136-229)||(23744928-23745021)
chr3 (136-229)||(24063453-24063546)
chr3 (136-231)||(16926971-16927066)
chr3 (136-231)||(17638202-17638296)
chr3 (136-231)||(27670414-27670509)
chr3 (136-228)||(6487358-6487450)
chr3 (136-231)||(9272928-9273023)
chr3 (136-231)||(9273162-9273257)
chr3 (136-218)||(17638375-17638456)
chr3 (136-231)||(23708246-23708341)
chr3 (136-231)||(23726702-23726797)
chr3 (136-231)||(23745158-23745253)
chr3 (136-231)||(35038216-35038311)
chr3 (136-231)||(54368483-54368578)
chr3 (136-231)||(20327636-20327731)
chr3 (136-231)||(35038450-35038545)
chr3 (136-197)||(28087275-28087336)
chr3 (167-231)||(16239825-16239889)
chr3 (147-231)||(18757820-18757904)
chr3 (147-231)||(24063683-24063767)
chr3 (135-231)||(54567858-54567954)
chr3 (136-231)||(7697420-7697514)
chr3 (136-231)||(16239558-16239653)
chr3 (169-231)||(472082-472144)
chr3 (177-231)||(23610393-23610447)
chr3 (136-228)||(39683292-39683385)
chr3 (147-231)||(23691446-23691530)
chr3 (135-231)||(38791472-38791568)
chr3 (172-228)||(45138827-45138883)
chr3 (164-231)||(12930150-12930217)
chr3 (136-231)||(22729067-22729162)
chr3 (136-231)||(31317433-31317528)
chr3 (161-231)||(34610552-34610623)
chr3 (168-231)||(39269330-39269393)
chr3 (167-230)||(45138994-45139057)
chr3 (177-231)||(4155332-4155386)
chr3 (167-231)||(20303086-20303150)
chr3 (179-230)||(1800225-1800276)
chr3 (168-231)||(17001443-17001506)
chr3 (136-231)||(39620293-39620388)
chr3 (136-231)||(49629573-49629667)
chr3 (177-231)||(13574943-13574997)
chr3 (177-231)||(45828027-45828081)
chr3 (170-224)||(50083110-50083164)
chr3 (138-208)||(54368691-54368761)
chr3 (177-230)||(50930710-50930763)
chr3 (167-231)||(4155557-4155621)
chr3 (164-208)||(30179753-30179797)
[»] scaffold0334 (1 HSPs)
scaffold0334 (136-231)||(4451-4546)
[»] scaffold0481 (1 HSPs)
scaffold0481 (136-231)||(3493-3588)
[»] chr1 (54 HSPs)
chr1 (136-231)||(3169733-3169828)
chr1 (136-231)||(51588959-51589054)
chr1 (136-231)||(51589193-51589288)
chr1 (136-228)||(28408067-28408159)
chr1 (137-231)||(25137325-25137419)
chr1 (136-231)||(12244984-12245079)
chr1 (136-231)||(52127688-52127782)
chr1 (149-231)||(40079132-40079214)
chr1 (136-231)||(3169967-3170063)
chr1 (136-231)||(35772231-35772326)
chr1 (168-231)||(51589805-51589868)
chr1 (133-231)||(4113028-4113126)
chr1 (136-231)||(52650793-52650888)
chr1 (169-231)||(38668125-38668187)
chr1 (167-231)||(17452701-17452765)
chr1 (168-231)||(8870932-8870995)
chr1 (136-231)||(15986355-15986450)
chr1 (136-231)||(17452850-17452945)
chr1 (136-231)||(25145742-25145837)
chr1 (136-226)||(16163134-16163224)
chr1 (134-231)||(38080570-38080666)
chr1 (139-231)||(2859414-2859506)
chr1 (135-231)||(26173478-26173574)
chr1 (164-228)||(26865383-26865447)
chr1 (167-231)||(41035849-41035913)
chr1 (135-231)||(43409773-43409868)
chr1 (136-231)||(51590007-51590100)
chr1 (136-231)||(25713360-25713455)
chr1 (136-231)||(26177110-26177205)
chr1 (136-231)||(35892258-35892353)
chr1 (168-231)||(38733381-38733444)
chr1 (136-231)||(42586461-42586555)
chr1 (136-231)||(52961549-52961644)
chr1 (177-231)||(39348374-39348428)
chr1 (177-231)||(49142961-49143015)
chr1 (135-231)||(20208550-20208644)
chr1 (177-230)||(52907392-52907445)
chr1 (136-208)||(7307688-7307760)
chr1 (135-231)||(26176874-26176970)
chr1 (136-231)||(855948-856043)
chr1 (136-231)||(4112562-4112657)
chr1 (136-231)||(11924888-11924983)
chr1 (167-206)||(17402712-17402751)
chr1 (168-207)||(17468343-17468382)
chr1 (168-231)||(25145507-25145570)
chr1 (168-223)||(26173254-26173309)
chr1 (136-231)||(30369802-30369897)
chr1 (140-231)||(31181535-31181626)
chr1 (140-231)||(39348141-39348232)
chr1 (135-201)||(35303492-35303558)
chr1 (174-231)||(47370718-47370775)
chr1 (136-201)||(51459882-51459947)
chr1 (167-231)||(16162931-16162995)
chr1 (177-229)||(29898920-29898972)
[»] scaffold0005 (1 HSPs)
scaffold0005 (134-231)||(56424-56521)
[»] scaffold0766 (1 HSPs)
scaffold0766 (168-231)||(6273-6336)
[»] scaffold0092 (2 HSPs)
scaffold0092 (136-231)||(5622-5717)
scaffold0092 (136-231)||(5857-5952)
[»] scaffold0692 (2 HSPs)
scaffold0692 (168-231)||(5776-5839)
scaffold0692 (169-231)||(5566-5628)
[»] scaffold0519 (2 HSPs)
scaffold0519 (136-231)||(2118-2213)
scaffold0519 (135-231)||(1882-1978)
[»] scaffold0050 (1 HSPs)
scaffold0050 (137-229)||(69557-69649)
[»] scaffold0048 (1 HSPs)
scaffold0048 (136-231)||(81809-81904)
[»] scaffold1034 (1 HSPs)
scaffold1034 (134-196)||(3201-3263)
[»] scaffold0129 (1 HSPs)
scaffold0129 (168-231)||(14302-14365)
[»] scaffold0400 (1 HSPs)
scaffold0400 (138-231)||(3813-3907)
[»] scaffold0365 (1 HSPs)
scaffold0365 (138-231)||(4457-4551)
[»] scaffold0083 (1 HSPs)
scaffold0083 (169-231)||(51236-51298)
[»] scaffold0041 (1 HSPs)
scaffold0041 (177-233)||(67493-67549)
[»] scaffold0047 (1 HSPs)
scaffold0047 (169-231)||(12647-12709)
[»] scaffold0001 (1 HSPs)
scaffold0001 (137-194)||(429841-429898)


Alignment Details
Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 1926636 - 1926486
Alignment:
Q  58 cgtgatacatttgtttttgtttattacatatatggctcggttaactcccaaataaatgactacgtaaatcaaacactctgttaagagttccacatcggtt 157  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||| |||||| ||||    
T  1926636 cgtgatatgtttgtttttgtttattacatatatggctcggttaactcccaaataaatgactacacaaatcaaacacaatgttaagagtcccacattggtt 1926537  T
Q  158 agaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |  |||||    |||||||| |||||||||||||| ||| |||| ||||||    
T  1926536 aagagttggttagacaatttatttataagtgggggtaatcctcacctcaca 1926486  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2324441 - 2324536
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  2324441 tgttaagagtcccacatcggttagaagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 2324536  T

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Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 32884074 - 32884169
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  32884074 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 32884169  T

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Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2324207 - 2324302
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  2324207 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 2324302  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 17855046 - 17854953
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||    
T  17855046 tgttaagagtctcacatcggttaggagttgacctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtg 17854953  T

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Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 27897722 - 27897628
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||| | || |||||||||||||||||    
T  27897722 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt-ggggcaattctcacctcacaagtcggttttgtggggttgtgtt 27897628  T

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Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 29718295 - 29718390
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||    
T  29718295 tgttaagagtcccacatcggttaggagttggcttgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgtt 29718390  T

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Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 28407911 - 28407815
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||||||| | ||| ||| |||||||||||||||||||||||||| |||| |||||| |||| |||||||| ||||||||    
T  28407911 ctgttaagagtcccacatcggttaggaattggcctaacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgtt 28407815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 19191727 - 19191632
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| || |||||||||| ||||| ||||||| ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||    
T  19191727 tgttaagagtcccccatcggttaggagttggcctgacagtttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgtt 19191632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 13486300 - 13486396
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| ||||||||| |||| ||||||  | |||||||||||||||||||    
T  13486300 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataagtggggggcaatcctcacctcacaaactgattttgtggggttgtgtt 13486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 37770061 - 37769965
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||||||| |||||   ||||||||||||||||||||||||||||  ||| |||| | |||| |||||||||||||||||    
T  37770061 ctgttaagagtcccacatcggttaggagttggtttgacaatttgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgtt 37769965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 5509280 - 5509375
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||| || ||||||||||||||||||||||||||| |||| | |||| |||| ||||||||||| |||||    
T  5509280 tgttaagagtcccacatcagttaggagttggcccgacaatttgtttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgtt 5509375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 17854809 - 17854714
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||  ||||||||| ||||||||||||||||||||  |||||||||| | || ||||||||| |||||||    
T  17854809 tgttaagagtcccacatcggttaggagttagcctgacaatctgtttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgtt 17854714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 36316168 - 36316073
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||  | ||| |||  |||||||||||| ||||    
T  36316168 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacattacaagccagttttgtggggttatgtt 36316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40149120 - 40149025
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||||| |||||| ||| | ||||||||||||||| |||| |||| |||||| ||||||||||||||||||||||    
T  40149120 tgttaagagtctcacatcggatagaagatgacctaacagtgtgtttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgtt 40149025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 5509048 - 5509141
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||  |||||||||||| |||||  ||||||||||||||||||||||||| ||| |||| |||||| || | |||||||||||||||||    
T  5509048 ttaagagtcacacatcggttaggagttggtctgacaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgtt 5509141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 40379563 - 40379466
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||| |||  | || ||||||| | |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  40379563 tctgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 40379466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 2029736 - 2029828
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| ||||||||| ||| |  |||||||||||| ||||||||||||| |||||| |||| |||||| |||| ||||||||||||||    
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgt 2029828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 27036529 - 27036469
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaat 196  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  27036529 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 27036469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 15124665 - 15124570
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||  ||  |||||||| |||||||||||||||||||| | || |||| | ||||||||||||||||||||||    
T  15124665 tgttaagagtcccacatcggatagaacatggtctgacaatatgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgtt 15124570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 16419469 - 16419564
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  ||  |||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  16419469 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 16419564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 17719367 - 17719462
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||| ||||||||||    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgtt 17719462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 37840304 - 37840399
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||| || ||| || |||||||||||| ||||||||||||| ||||||  ||| |||||| |||| |||||||||||||||||    
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgtt 37840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40379326 - 40379231
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || ||||||| | |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  40379326 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 40379231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40718324 - 40718229
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||||||| |||||||||||||||||| |||||||  ||| ||||||  ||| |||||||| ||||||||    
T  40718324 tgttaagagtctcacatcggttaggagttgacctaacaatttgtttataagtgagggcaatcatcacctcacaaaccggttttgtggagttgtgtt 40718229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5711556 - 5711461
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  5711556 tgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgtt 5711461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 4662198 - 4662272
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacagg 210  Q
    |||||||||| ||||||||| ||| |  |||||||||||| |||||||||||||||||||| |||| ||||||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatgtttataagtgggggcaatcctcacctcacagg 4662272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 2029999 - 2030063
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||||| ||||||||||||| |||||| |||| |||||| |||| ||||||||||||||    
T  2029999 tgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgt 2030063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 14466528 - 14466432
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  || ||||||||| |||||||||||||| ||||| |||| || ||| |||| |||||||||||||||||    
T  14466528 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgtt 14466432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 37812615 - 37812531
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||| ||||||||| ||  |  |||||||||||| |||||||||||||||||||| |||| |||||| | |||||||||    
T  37812615 tgttaagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgt 37812531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 8424855 - 8424950
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||| ||||||| ||||| |||||  |||||||||| ||||||||||||||||||  ||| ||||||  ||  |||||||||||||||||    
T  8424855 tgttaaaagtcccacatcagttaggagttggtctgacaatttatttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgtt 8424950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24396067 - 24396162
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| || ||| || ||||||||| ||||||||||| |||| |||| ||| | |||| | || |||||||||||||||||    
T  24396067 tgttaagagtcccacatcggatataagatggcctgacaatatgtttataagtaggggtaattatcaccccacaagtcggttttgtggggttgtgtt 24396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 17525423 - 17525361
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||| ||||||||| ||||||    
T  17525423 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgt 17525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 14927291 - 14927352
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    ||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||| |||||    
T  14927291 cctgacaatatgtttataagtgggggcaatcctcacctcataagccgattttgtggagttgt 14927352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 9927893 - 9927973
Alignment:
Q  151 atcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||| ||  |||||||| |||||||||||||||| ||| |||| |||||| || |||||| ||||||||||||    
T  9927893 atcggatagaagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgtt 9927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 16533545 - 16533609
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| ||||  ||||| |||| ||||||| |||||||||    
T  16533545 cctgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtt 16533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 21591748 - 21591804
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtggggg 192  Q
    |||||||||| |||||||| |||| |||||  |||||||||||||||||||||||||    
T  21591748 tgttaagagtcccacatcgattaggagttggtctgacaatttgtttataagtggggg 21591804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 37812385 - 37812301
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||| ||||||||| ||| |  || ||||||||| ||||||||||||||| |||| |||| |||||| | |||||||||    
T  37812385 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcctcacctcacaagtcgattttgt 37812301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5711792 - 5711697
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| ||||||||||||||||||||  ||| || | | |||| |||||||||||||||||    
T  5711792 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgtt 5711697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 31008644 - 31008593
Alignment:
Q  180 ttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||| |||||| |||| |||||||||||||||||    
T  31008644 ttataagtgtgggcaattctcacctcacatgccggttttgtggggttgtgtt 31008593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 31222485 - 31222583
Alignment:
Q  134 tctgttaagagttccacatcggttagaagtt-gacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||||||| ||||||||||| |||| ||| ||| ||||| ||||||||||| |||||| |||| | || |  |||||||||| ||||||||||    
T  31222485 tctgctaagagttctacatcggttaggagttcgacttgataatttatttataagtggaggcaatcctcaccccataaaccgattttgtagggttgtgtt 31222583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 33606171 - 33606085
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtgg 222  Q
    |||||||||| ||||||||| ||| || || ||||| ||| ||||||||||| |||||||| |||| ||||||  ||| ||||||||    
T  33606171 tgttaagagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcctcacctcacaaaccggttttgtgg 33606085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 94137 - 94052
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtg 221  Q
    |||||||||| ||||||||| |||  | || ||||||| | |||||||||||||||||||| |||| |||||| | || |||||||    
T  94137 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagtcggttttgtg 94052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 3738900 - 3738965
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| | ||||||| |||||| |||| ||| ||| |||||||||||||||||||| ||||    
T  3738900 tgttaagagtccaacatcggatagaagatgacatgataatgtgtttataagtgggggcaatcctca 3738965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 31700865 - 31700767
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattc---tcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||| |||  | || ||||||||| |||||||||||| |||||||||    || |||||| |||| ||||||||| |||||||    
T  31700865 tgttaagagttacacatcggataggtgatggcctgacaatgtgtttataagtgagggcaattcccaccacctcacaagccggttttgtgggtttgtgtt 31700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 36352043 - 36351971
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    ||||||||||   ||||||| ||| ||  ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  36352043 tgttaagagtcttacatcggataggagacgacctgacaatgtgtttataagtggggacaattctcacctcaca 36351971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 36352241 - 36352181
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||||||||||||||  ||| |||| | |||| |||||||||||||||||    
T  36352241 acaatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgtt 36352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 11020557 - 11020620
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||| ||||||||||||| |||||| |||| |||||| |||||||| ||||| |||||||    
T  11020557 ctgaaaatgtgtttataagtggaggcaatcctcacctcacaagccgatttagtgggattgtgtt 11020620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 25082622 - 25082559
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| ||||||||  ||| |||||| |||  |||||||||||||||||    
T  25082622 ctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgtt 25082559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 14927097 - 14927139
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctca 206  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  14927097 tgacctgacaatgtgtttataagtgggggcaatcctcacctca 14927139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 19544459 - 19544402
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtgg 222  Q
    |||||||| ||| ||||||||||||||||||| ||||| |||||| |||| ||||||||    
T  19544459 tgacctgataatgtgtttataagtgggggcaa-tctcacctcacaagccggttttgtgg 19544402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 1926679 - 1926650
Alignment:
Q  12 atcatcaagttgacaatgatacatttgttt 41  Q
    ||||||||||||||||||||||||||||||    
T  1926679 atcatcaagttgacaatgatacatttgttt 1926650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 17719575 - 17719628
Alignment:
Q  178 gtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||| || | ||||||  ||| |||||||||||||||||    
T  17719575 gtttataagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgtt 17719628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 25313631 - 25313570
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttg-tttataagtgggggcaat 196  Q
    |||||||||| |||||| || ||| || |||||||||||| || ||||||||||||||||||    
T  25313631 tgttaagagtcccacattggatagtagatgacctgacaatgtgttttataagtgggggcaat 25313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 40149343 - 40149260
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtg 221  Q
    |||||||||| ||||||||| ||  || |||||| ||||| ||||||||||| ||||||||||||| |||||| | || |||||||    
T  40149343 tgttaagagt-ccacatcggatatgagatgacctaacaatgtgtttataagt-ggggcaattctcacctcacaagtcggttttgtg 40149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 93239 - 93156
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||| | |||| || ||| |||| ||||||    
T  93239 tgttaagagtcccacatcggataggtgatg-cctgacaatgtgtttataagtgggggcactcctcaccttacaagccggttttgt 93156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 5851767 - 5851703
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtgg-ggttgtgtt 231  Q
    |||||||| | ||||||||||||| |||| |||| |||||| |||| |||||||| |||||||||    
T  5851767 ctgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggaggttgtgtt 5851703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 53828644 - 53828545
Alignment:
Q  132 actctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  53828644 actctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgtt 53828545  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 1518131 - 1518226
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  1518131 tgttatgagtcccacatcggttaggagttgacctgacaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgtt 1518226  T

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Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 20821940 - 20822035
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||    
T  20821940 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgtt 20822035  T

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Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 21498762 - 21498857
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  21498762 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 21498857  T

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Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 53815046 - 53814951
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| | || |||||||||||||||||    
T  53815046 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtt 53814951  T

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Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 21498321 - 21498416
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||| ||||    
T  21498321 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgtt 21498416  T

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Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 53828406 - 53828311
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| |  |||||||||||||||||||||    
T  53828406 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataaaccgattttgtggggttgtgtt 53828311  T

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Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 54054922 - 54054827
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||    
T  54054922 tgttaagagtcccacatcgattaggagttgacctaacaatttgtttataagtgggggcaattctcacctcataagccgtttttgtggggttgtgtt 54054827  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 35788861 - 35788956
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||  || ||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  35788861 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgtt 35788956  T

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Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 54055149 - 54055064
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtgg 222  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  54055149 tgttaagagtcccacatcggttagaagttggcctaacaatttgtttataagtgggggcaatcctcatctcacaagccg-ttttgtgg 54055064  T

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Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 14783306 - 14783209
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||||| || |||||||  ||| |||||| |||| |||||||||||||||||    
T  14783306 tctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgtt 14783209  T

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Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 12869146 - 12869051
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||||||||  ||| |||||| |||| |||||||||||||||||    
T  12869146 tgttaagagtcctacatcagttagcagttggcctgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgtt 12869051  T

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Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 25052819 - 25052914
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||| ||| | || |||||| |||| |||||||||||||||||    
T  25052819 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgtt 25052914  T

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Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 980167 - 980095
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  980167 tgttaagagtcccacatcggttaggagttgacctgagaatttgtttataagtgggggcaatcctcacctcaca 980095  T

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Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 5846346 - 5846430
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||| |||||| |||| ||||||    
T  5846346 tgttaagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgt 5846430  T

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Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 5846113 - 5846204
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttg 227  Q
    ||||||||||  |||||||||||| |||||  ||||||||||||||||||||||||||||| |||| |||| | |||| |||||||||||||    
T  5846113 tgttaagagtctcacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttg 5846204  T

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Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9685599 - 9685694
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| || |||||||||| |||||  || |||||||||||||||||||||||||| |||| |||||| |||| |||| ||||||||||||    
T  9685599 tgttaagagtcccgcatcggttaggagttggtctaacaatttgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgtt 9685694  T

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Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35819245 - 35819150
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||  |||||| |||  ||||||| |||||||||    
T  35819245 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttatatgtgggggcaatcctcgcctcacaagccagttttgtgaggttgtgtt 35819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40717558 - 40717463
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| ||| | ||||| ||||| |||||||||||||||||||||||| |||| |||| | | || |||||||||||||||||    
T  40717558 tgttaagagttccacatcagttgggagttggcctgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgtt 40717463  T

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Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 22863440 - 22863536
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  ||||||||  ||||| || ||||||||| |||||||||||||||||||| |||| | |||| |||| |||||||||||||||||    
T  22863440 ctgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgtt 22863536  T

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Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9685365 - 9685460
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||||||||| ||||| ||| ||||||||||||||||||||| |||| |||| |||||| | || ||||||| |||||||||    
T  9685365 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgtt 9685460  T

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Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 11036863 - 11036768
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  11036863 tgttaagagtacaacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgtt 11036768  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 28245643 - 28245548
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  28245643 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 28245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 39902680 - 39902585
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || ||||||||| |||||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  39902680 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtt 39902585  T

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Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 2463789 - 2463868
Alignment:
Q  151 atcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||| || | |||||| |||| |||||||||||||||||    
T  2463789 atcggttaggagttg-cctgacaatttgtgtataagtgggggcaatccttacctcacaagccggttttgtggggttgtgtt 2463868  T

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Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 50543685 - 50543589
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||| |||  | || ||||||||| ||| |||||||||||||||| |||| |||||| |||| |||||||| ||||||||    
T  50543685 ctgttaagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgtt 50543589  T

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Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2516168 - 2516261
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||| ||||||||||| |||||||||||| |||||||||||||| |||| ||||| || ||  |||| |||||||||||||||||    
T  2516168 tgttaagagtcccacttcggttagaagatgacctgacaatatgtttataagtgggagcaa-tctcacct-actagccggttttgtggggttgtgtt 2516261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 22827509 - 22827600
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||| ||| || || ||||||||  |||||||||||||||||||| |||| |||||| |||| |||||| ||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgtt 22827600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 35788626 - 35788721
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | ||| |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||| ||||||||||||    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgtt 35788721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35796859 - 35796764
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||  || |  || | ||||||| |||||||||||||||||||| |||| |||||| |||| ||||||| |||||||||    
T  35796859 tgttaagagttccacatcggacaggacatggcatgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgtt 35796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 52559562 - 52559629
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||||||||||||||  ||| |||||| |||| |||||||||||||||||    
T  52559562 tgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgtt 52559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 9279192 - 9279289
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||  |||||||| |||  | || ||||||||| ||||||||||||||||||||  ||| |||||  |||| |||||||||||||||||    
T  9279192 tctgttaagagtcgcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttgtgtt 9279289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 21684964 - 21685060
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  |||||||| ||| |  || ||||||||| ||||||||||||||   ||| |||| |||||| ||||||||||||||||||||||    
T  21684964 ctgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgtt 21685060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 22231190 - 22231098
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| | ||||||| ||| |  || ||||||||| ||||||||||||||| |||| |||| |||||| |||| ||||||||||||||    
T  22231190 tgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgt 22231098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 22845533 - 22845469
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  22845533 cctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgtt 22845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 27634198 - 27634114
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||| ||||||||| ||| |  || ||||||||| |||||||||||||||||||| |||| ||||||  ||||||||||    
T  27634198 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaaaccgattttgt 27634114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 2261858 - 2261775
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||| || || ||||||||||| ||||||||||||| |||| |||| ||||||| ||  |||||||||||||||||    
T  2261858 cacattggttaggaggtggcctgacaatttatttataagtggggacaatcctcacctcacagaccagttttgtggggttgtgtt 2261775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 22231397 - 22231330
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||| | |||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  22231397 tgacctgagaatatatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 22231330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 28246169 - 28246110
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    ||||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||||    
T  28246169 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgt 28246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35797094 - 35796999
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||| |||||  || || |||| ||||||| |||||||||||||||||||| |||| ||||||  ||  |||||||||||||||||    
T  35797094 tgttaagagtcccatatcggacaggagatgacatgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgtt 35796999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 44118972 - 44118881
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||| ||  || || ||||||||| |||||||||||||||| ||| |||| |||||| |||  |||||||||||||||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgtt 44118881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 53814775 - 53814696
Alignment:
Q  152 tcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||| ||||| |||||||||||||||||||||||||  ||| |||| |||||| |||| ||||||||| |||||||    
T  53814775 tcggctaggagttggcctgacaatttgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgtt 53814696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 27634635 - 27634549
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||||| ||||||||| ||| |  || ||||||||| ||||||| |||||||||||| |||| |||||| |||| ||||||    
T  27634635 tctgttaagagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaatcctcacctcacaagccggttttgt 27634549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 25324109 - 25324056
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    ||||||||||||||||||||| ||| |||||| | |||||||||||||||||||    
T  25324109 tgtttataagtgggggcaattatcacctcacaagtcgattttgtggggttgtgt 25324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 16066052 - 16066104
Alignment:
Q  156 ttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  16066052 ttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcaca 16066104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 400650 - 400587
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||| ||| |||| |||||| |||| ||||||| |||||||||    
T  400650 ctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgtt 400587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 5398296 - 5398234
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||| |||| |||| ||||||||||| |||| |||||||||||||||||    
T  5398296 ctgacaatgtgtttataagagggg-caatcctcatctcacaagccggttttgtggggttgtgtt 5398234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 50543415 - 50543352
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||| |||||||||||||||| |||| | |||| |||| |||||||||||||||||    
T  50543415 ctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgtt 50543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 7806687 - 7806613
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtg 221  Q
    ||||||||||||| ||||| ||||||||| | ||| ||||||| |||||| |||| |||||| |||| |||||||    
T  7806687 ccacatcggttaggagttggcctgacaatgtatttttaagtggcggcaatcctcacctcacaagccggttttgtg 7806613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 7892547 - 7892605
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggtt 226  Q
    |||||||| ||||||||||||| ||||||| ||||||||||  ||| ||||||||||||    
T  7892547 ctgacaatgtgtttataagtggaggcaattttcatctcacaatccggttttgtggggtt 7892605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 25323874 - 25323820
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  25323874 tgtttatacgtgggggcaatcctcacctcgcaggccggttttgtggggttgtgtt 25323820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 27464334 - 27464272
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||||  ||||||||||||| |||||| |||| |||||| |||| |||||||||||||||    
T  27464334 cctgacaaagtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtg 27464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 11104013 - 11103964
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataa 185  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| |||||||    
T  11104013 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataa 11103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 12005548 - 12005491
Alignment:
Q  174 atttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||||||||| |||| |||||| |||| ||||||| |||||||||    
T  12005548 atttgttaataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgtt 12005491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 31254524 - 31254459
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||||| ||||    
T  31254524 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctca 31254459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 35609566 - 35609513
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||||||||||||||| |||| |||||| | || ||||||||||||||||    
T  35609566 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgt 35609513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 35609787 - 35609734
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    ||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||    
T  35609787 tgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgt 35609734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 52559782 - 52559855
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    ||||||||| ||| |  |||| ||||||| |||||||||||||| |||||||||| |||||| |||| ||||||    
T  52559782 ccacatcggataggacatgacttgacaatgtgtttataagtgggagcaattctcacctcacaagccggttttgt 52559855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 34358116 - 34358052
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||| |||||||||| ||||  ||| | |||| |||||||||||||||||    
T  34358116 cctgacaatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgtt 34358052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 6218406 - 6218501
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||| | ||| || |||||| ||||| ||||||||||||||||||||  ||| |||||| |||| |||| |||  |||||||    
T  6218406 tgttaagagtctcacatcagataggagatgacctaacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgtt 6218501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 11036600 - 11036533
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||||| ||||||||||| ||||||||  ||| |||||| |||| ||||| |||||||||||    
T  11036600 tgacatgacaatgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgtt 11036533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 35645850 - 35645787
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||  |||| | ||||||||||    
T  35645850 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttttagggttgtgtt 35645787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 53559359 - 53559312
Alignment:
Q  184 aagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||| |||| || ||| ||||||||||||||||||||||    
T  53559359 aagtgggggcaatcctcaccttacaagccgattttgtggggttgtgtt 53559312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 53699026 - 53699089
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||| ||||||| |||| ||||||  |||| ||| ||||||||||||    
T  53699026 ctgacaatatgtttataagtgtgggcaatcctcacctcacaaaccgactttatggggttgtgtt 53699089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 12869347 - 12869285
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||| |||| |||| |||| | | || |||||||||||||||||    
T  12869347 tgacaatttatttataagtggggacaatcctcacctcataagacggttttgtggggttgtgtt 12869285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 11783911 - 11783814
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||  |||||||  |||||  |||| | ||||||||||||||||| |||| ||| |||| ||||||    | |||||||||||||||||    
T  11783911 tctgttaagagtctcacatcgaatagaaaatgactttacaatttgtttataagtaggggtaatcctcacctcacaaattggttttgtggggttgtgtt 11783814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 37836049 - 37836142
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||  || |  || ||| ||||| | |||||||||||||||||| |||  || ||| |||| |||||||||||||||||    
T  37836049 ttaagagtcccacatcggacaggacatggcctaacaatgtatttataagtgggggcaatcctctccttacaagccggttttgtggggttgtgtt 37836142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 40717323 - 40717258
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| ||||||| |  ||||  |||||||||||| ||||||||||||||| |||| ||||    
T  40717323 tgttaagagtcccacatcagacagaacatgacctgacaatgtgtttataagtggggacaatcctca 40717258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 5398557 - 5398498
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||| ||||| |||| |||| |||||| |||| |||||||||||||||||    
T  5398557 acaatgtgtttataactgggg-caatcctcacctcacaagccggttttgtggggttgtgtt 5398498  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 6218206 - 6218266
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||||||||||||||  ||| |||||| | || |||||||| ||||||||    
T  6218206 acaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgtt 6218266  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 30566122 - 30566086
Alignment:
Q  165 gacctgacaatttgtttataagtgggggcaattctca 201  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  30566122 gacctgacaatgtgtttataagtgggagcaattctca 30566086  T

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Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 17202146 - 17202241
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  17202146 tgttaagagtcccacatcggttaagagttggcctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgtt 17202241  T

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Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 34027360 - 34027455
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  34027360 tgttaagaatcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 34027455  T

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Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 34027594 - 34027689
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||  ||||| |||| |||||||||||||||||    
T  34027594 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgtt 34027689  T

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Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2544564 - 2544469
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| | || |||||||||||||||||    
T  2544564 tgttaagagtcccacgtcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtt 2544469  T

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Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 18826605 - 18826510
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||| || ||| || |||||||||||| |||||||||||||||| |||||||| |||||| || |||||||||||||||||||    
T  18826605 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgtt 18826510  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 26562190 - 26562095
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||  ||| |||||| |||| |||||||||||| ||||    
T  26562190 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgtt 26562095  T

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Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 36206182 - 36206088
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||  ||| |||||| |||| |||| |||||||||    
T  36206182 tctgttaagagttccacatcggttaggagttggcctaacaatttgtttataagtggaggcaatcttcacctcacaagccggttttatggggttgt 36206088  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 40746243 - 40746327
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| |||||| ||||| |||||||||||||||||||||| ||||||| |||| |||| | ||||||||||||||||||||||    
T  40746243 ccacattggttaggagttggcctgacaatttgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgtt 40746327  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2544332 - 2544237
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||||||  ||| || ||| |||  |||||||||||||||||    
T  2544332 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgtt 2544237  T

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Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 6001552 - 6001457
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||| |||| |||| |  |||||||||| ||||| ||||    
T  6001552 tgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaatcctcacctcagaaaccgattttgtagggttatgtt 6001457  T

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Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 6634822 - 6634917
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| | ||   |||||||||||||||||    
T  6634822 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgtt 6634917  T

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Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 21861496 - 21861591
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| ||||||||||||||||||||||    
T  21861496 tgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgtt 21861591  T

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Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 31257146 - 31257053
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||||||  ||  |||||||||||||||||    
T  31257146 ttaagagtctcacatcggttagaagttggtctgacaatttgtttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgtt 31257053  T

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Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 3392949 - 3393044
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||  | || ||||||||| |||||||||||||||  |||||||| |||||| ||||||||||||||||||||||    
T  3392949 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtggggaaaattctcacctcacaagccgattttgtggggttgtgtt 3393044  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 21055070 - 21054975
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||| ||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 21054975  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 25620131 - 25620198
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  25620131 tgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 25620198  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 40746465 - 40746560
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||| |||||| ||||| |||||||||||||||||||||||||| ||| | || |||||| |||  ||||||| |||||||||    
T  40746465 tgttaagagtcccacattggttaggagttggcctgacaatttgtttataagtgggggaaatccacacctcacaagccagttttgtgaggttgtgtt 40746560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 4267821 - 4267891
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctca 206  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||| |||| ||||    
T  4267821 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctca 4267891  T

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Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 26029077 - 26028983
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | ||||||||||| ||||| ||||||||||| ||| ||| |||| ||||| |||| |||||| |||||||||||| |||||||||    
T  26029077 gttaagagtcctacatcggttaggagttggcctgacaatttatttttaaatgggagcaatcctcacctcacaagccgattttgtgaggttgtgtt 26028983  T

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Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 4268021 - 4268081
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaat 196  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  4268021 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaat 4268081  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 29469571 - 29469667
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  29469571 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 29469667  T

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Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 36277312 - 36277248
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| |||| |||||| | ||||||||||||||||||||    
T  36277312 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgtt 36277248  T

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Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 48243523 - 48243459
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||    
T  48243523 cctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgtt 48243459  T

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Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 31257372 - 31257289
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| |||||  |||||||||| |||||||||||||||||| || |  ||||| |||| |||||||||||||||||    
T  31257372 cacatcggttaggagttggtctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgtt 31257289  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 48243146 - 48243083
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  48243146 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 48243083  T

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Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 10882118 - 10882032
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggtt 226  Q
    |||||| |||||| | | || ||||| | |||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  10882118 aagagtcccacattgataaggagttggcatgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggtt 10882032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 44874462 - 44874368
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||| ||| || | |||||||||| |||||||||||||||| ||| |||| ||||||  ||||||||||  |||||||||    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcctcacctcacaaaccgattttgtatggttgtgtt 44874368  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 47710409 - 47710505
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  |||||||| |||  | || ||| ||||| |||||||||||||||||||| |||| |||||| |||  |||||||||||||||||    
T  47710409 ctgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgtt 47710505  T

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Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 47722065 - 47722161
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  |||||||| |||  | || ||| ||||| |||||||||||||||||||| |||| |||||| |||  |||||||||||||||||    
T  47722065 ctgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgtt 47722161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 29469807 - 29469902
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||| ||||||||    
T  29469807 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgtt 29469902  T

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Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 48661672 - 48661577
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | ||| || |||||||||||| | |||||| ||||||||||| |||| |||||| |||| ||||||| | |||||||    
T  48661672 tgttaagagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgtt 48661577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 2404291 - 2404231
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaat 196  Q
    |||||||||| ||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  2404291 tgttaagagtcccacatcggttaggagatggactgacaatgtgtttataagtgggggcaat 2404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 3038166 - 3038106
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||||||||||||||||| ||||  ||||| |||| |||||||||||||||||    
T  3038166 acaatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgtt 3038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 21821804 - 21821868
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||| |||||||||||||||  ||||||||||  ||||||||||||| |||||||    
T  21821804 cctgacaatatgttaataagtgggggcaatcttcatctcacaaaccgattttgtgggattgtgtt 21821868  T

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Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 21861260 - 21861356
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  || ||||||||| |||||||||||| ||||||| |||| || ||| |||| ||||||||| |||||||    
T  21861260 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgtt 21861356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 26240001 - 26239938
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| | || | |||||||||||||||    
T  26240001 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgtt 26239938  T

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Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 43688276 - 43688182
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || ||||||||| |||||||||||||||||||| || | ||| || ||||  ||||||||||||||||    
T  43688276 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatccttacctctcaagccg-gtttgtggggttgtgtt 43688182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 32879726 - 32879636
Alignment:
Q  142 gagttccacatcggttagaagttgacctgacaatttgtttataagtggggg-caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| |||| |||||||  || || ||||||||| |||||||||||||||| |||| |||| |||||| |||| ||||| |||||||||||    
T  32879726 gagtcccacttcggttaagagatggcctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgcggggttgtgtt 32879636  T

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Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 42985207 - 42985145
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||||||| |||||| |||| |||||| | |||||||||| |||||||||    
T  42985207 tgacaatgtgtttataagtggaggcaatcctcacctcacaagtcgattttgtgaggttgtgtt 42985145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 23839159 - 23839099
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||||||||||||| ||| |||| |||||| |||| ||||||| |||||||||    
T  23839159 acaatctgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgtt 23839099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 40898791 - 40898735
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtttg 233  Q
    |||||||||||||||||||| |||| || |||  |||||||||||| ||||||||||    
T  40898791 tgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtttg 40898735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 46452599 - 46452695
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  |||||  ||||| ||||||||||| ||||||||| |||| |||||| |  | |||||||||||||||||    
T  46452599 tgttaagagtcccacatcggataggacatgaccacacaatgtgtttataagtggggggcaatcctcacctcacaagttggttttgtggggttgtgtt 46452695  T

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Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 1596561 - 1596655
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||| ||||||||||||||| |||| || ||| ||||  ||||||||||||||||    
T  1596561 tgttaagagtcccacatcggacaggacatggcctgacaatgtgttaataagtgggggcaatcctcaccttacaagccg-gtttgtggggttgtgtt 1596655  T

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Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 1596795 - 1596890
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||| ||||| | |||||||||||||||||| |||| || ||| |||| |||||| ||||||||||    
T  1596795 tgttaagagtcccacatcggacaggacatggcctaacaatgtttttataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgtt 1596890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 31892354 - 31892449
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| | |||  |||| ||||||| | ||||||||||||| ||||  ||| |||||| |||| |||||||||| ||||||    
T  31892354 tgttaagagtctcacatcggatggaacatgacatgacaatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgtt 31892449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 36277076 - 36277013
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||||||| ||||||||| |||||| || | |||| |||| |||||||    
T  36277076 ctgacaatgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgtt 36277013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 36993159 - 36993096
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| || ||||| |||| |||||| || | |||||||||||||||||    
T  36993159 ctgacaatgtgtttataagtaggagcaatgctcacctcacaagctggttttgtggggttgtgtt 36993096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 43075399 - 43075332
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||||  |||||||||||||||||||| |||| |||||| |  | |||||||||||||||||    
T  43075399 tgacatgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgtt 43075332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 43085626 - 43085559
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||||  |||||||||||||||||||| |||| |||||| |  | |||||||||||||||||    
T  43085626 tgacatgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgtt 43085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 43089297 - 43089230
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||||  |||||||||||||||||||| |||| |||||| |  | |||||||||||||||||    
T  43089297 tgacatgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgtt 43089230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 10903085 - 10903147
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||||| |||| ||| |||| |||||| |||| |||||||| ||||||||    
T  10903085 tgacaatatgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgtt 10903147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 20305739 - 20305685
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| ||||||  |  ||||||||||||||||||    
T  20305739 tgtttataagtgggggcaatcctcacctcacaaacttattttgtggggttgtgtt 20305685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 3519842 - 3519777
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||| ||| ||||    
T  3519842 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggtaatcctca 3519777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 1793754 - 1793806
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||| |||||||||||| |||| |||||| || | |||||||||||||||    
T  1793754 tgtttattagtgggggcaatcctcacctcacaagcaggttttgtggggttgtg 1793806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 4454775 - 4454815
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||| |||||||||||||||||||| |||| ||||||    
T  4454775 ctgacaatgtgtttataagtgggggcaatcctcacctcaca 4454815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 11211752 - 11211701
Alignment:
Q  179 tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||| |||| |||| |||||| |||| |||||||||||||||||    
T  11211752 tttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgtt 11211701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 23796266 - 23796206
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||||||||||||||  ||| ||||||    |||||||||||||||||||    
T  23796266 acaatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgtt 23796206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 31485510 - 31485446
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| ||||  |||||  | | ||||||| |||||||||    
T  31485510 cctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgtt 31485446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 31485745 - 31485681
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | |||||||||||||||||| |||| || ||| |||| |||||||  ||||||||    
T  31485745 cctgacaatgtttttataagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgtt 31485681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 47849798 - 47849850
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||||||| |||||||| |||| |||||| |||  |||||||||||||||    
T  47849798 tgtttataagttggggcaatactcacctcacaagccagttttgtggggttgtg 47849850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 19712919 - 19713014
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||    
T  19712919 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgtt 19713014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 21690689 - 21690784
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  21690689 tgttaagagtcccacatcggttaggatttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgtt 21690784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 27656425 - 27656520
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  27656425 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgtt 27656520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 28868074 - 28867979
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  28868074 tgttaagagtcccacatcggttacgagttgacctgacaatttatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 28867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 27772680 - 27772776
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| ||||||||    
T  27772680 ctgttaagattcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgtt 27772776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 8026356 - 8026451
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||| |||||||  ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  8026356 tgttaagagtcccacgtcggttatgagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 8026451  T

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Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 27772913 - 27773008
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| || | ||||||||| |||||||    
T  27772913 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagctggttttgtgggattgtgtt 27773008  T

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Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 27653183 - 27653279
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| |||||| | || ||||||||| |||||||    
T  27653183 ctgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgtt 27653279  T

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Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 7915817 - 7915910
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| | |||| || ||||||||| ||||||||| ||||||||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  7915817 tgttaagagtccaacattggatagaagttggcctgacaatgtgtttataagtggggggcaatcctcacctcacaagccgattttgtggggttgt 7915910  T

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Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4868694 - 4868599
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  4868694 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 4868599  T

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Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 17147777 - 17147682
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  |||||||||||| | |||||||||||||||||| |||| |||||| |||| |||||||||||| ||||    
T  17147777 tgttaagagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgtt 17147682  T

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Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 33494506 - 33494601
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || || | ||| ||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 33494601  T

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Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 15600903 - 15600997
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||||| ||||||||||||| |||||  |||| |||||||||||||||||||||||| ||||  ||||| | |  ||||||||||||||||    
T  15600903 tgttaagagtcccacatcggttaggagttggtctgataatttgtttataagtgggggcaatcctcacttcacaagtcagttttgtggggttgtgt 15600997  T

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Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 13740885 - 13740978
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| ||   |||| |||||||||||||||||||||||| ||||| ||||  ||||| | || |||||||||||||||||    
T  13740885 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgtt 13740978  T

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Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 13746385 - 13746478
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| ||   |||| |||||||||||||||||||||||| ||||| ||||  ||||| | || |||||||||||||||||    
T  13746385 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgtt 13746478  T

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Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 30256782 - 30256874
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| |||  | |||||||||||| ||||||||||| |||||||| |||| |||||| |||| |||||||||||||||||    
T  30256782 ttaagagtcccacatcggataggtgatgacctgacaatatgtttataagt-ggggcaatcctcacctcacaagccggttttgtggggttgtgtt 30256874  T

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Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 6543061 - 6542965
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||| ||  || ||  |||||||| ||||||||||||||||||||  ||| |||| | |||| |||||||||||||||||    
T  6543061 ctgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgtt 6542965  T

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Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 13353167 - 13353263
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  13353167 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 13353263  T

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Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 16722893 - 16722829
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  16722893 cctgataatctgtttataagtgggagcaattctcacctcacaagccgattttgtggggttgtgtt 16722829  T

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Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2736519 - 2736424
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| ||  || |||||||| ||| |||||||||||||||||||||||||  ||||| | || |||||| || |||||||    
T  2736519 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgtt 2736424  T

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Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2737287 - 2737192
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| ||  || |||||||| ||| |||||||||||||||||||||||||  ||||| | || |||||| || |||||||    
T  2737287 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgtt 2737192  T

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Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2753225 - 2753320
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  ||| | ||| |||||||| |||||||||||||||| ||| |||| |||||| | || |||||||||||||||||    
T  2753225 tgttaagagtcccacatcggaaagatgatgatctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgtt 2753320  T

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Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4868930 - 4868835
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || |||| |||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  4868930 tgttaagagtcccacatcggacaggacatggcctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 4868835  T

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Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 5572489 - 5572406
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||| || |||| |||||| | || |||||||||||||||||    
T  5572489 cacatcggttaggagtttgcctgacaatttgtttataagttggggccatcctcacctcacaagtcggttttgtggggttgtgtt 5572406  T

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Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9705221 - 9705316
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || | | ||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  9705221 tgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 9705316  T

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Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 33796293 - 33796388
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 33796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 25065209 - 25065116
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| ||| |  ||  |||||||| ||||||||||| |||||||| |||| |||||| |||| |||||||||||||||||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgtt 25065116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 11721907 - 11721967
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||||||||| |||| |||| | |||| |||||||||||||||||    
T  11721907 acaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgtt 11721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 19712719 - 19712775
Alignment:
Q  174 atttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    ||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||    
T  19712719 atttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgt 19712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 3680011 - 3680074
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| |||||||||| ||| ||||||| | ||||||||||||||||||||    
T  3680011 ctgacaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgtt 3680074  T

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Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5572732 - 5572638
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| | |||||||| |||| ||||| | ||||||||||||||||||||||||| || |||| |||||| ||||  ||||||||||| ||||    
T  5572732 tgttaagaatcccacatcgtttaggagttggcatgacaatttgtttataagtgggggccatcctcacctcacaagccg-gtttgtggggttttgtt 5572638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 11085560 - 11085643
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||| || || || |||||| |||||||||||||||||||||||||  ||||| |||| ||||||| |||||||||    
T  11085560 cacatcgggtaggagatggcccgacaatatgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgtt 11085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 12330407 - 12330313
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  ||  |||||||| ||||||||||||||| |||| ||||||||||| |||| ||||||| |||||||||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggg-caatcctcatctcacaagccggttttgtgaggttgtgtt 12330313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 15082025 - 15081930
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||| ||||||| || ||  |||||||| |||||| ||||||||||||| || | |||||| |||| ||||||||| |||||||    
T  15082025 tgttaagagtcccacaacggttaggagatggactgacaatatgtttacaagtgggggcaatccttaactcacaagccggttttgtgggattgtgtt 15081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24554084 - 24554179
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || ||  |||||||| | ||||||||||||||||||  ||| |||||| |||| |||||||| ||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgtt 24554179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 9705018 - 9705082
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||||||||||  ||| |||||| | || |||||||||||||||||    
T  9705018 cctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgtt 9705082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 12330026 - 12329966
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||||||||||||||||| |||| |||||| || ||||||||| |||||||||    
T  12330026 acaatgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgtt 12329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 15103020 - 15102964
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||||||||| |||||||||| ||||||||||||||  |||||||||| ||||||    
T  15103020 tgacctgacaatgtgtttataagcgggggcaattctcacttcacaggccggttttgt 15102964  T

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Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2736284 - 2736189
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||| ||||||||| ||| || |||||||||||| ||||||||||||||| |||| |||| |||| |  | |||||||| || |||||||    
T  2736284 tgttgagagtcccacatcgggtaggagatgacctgacaatgtgtttataagtggggacaatcctcacctcataaacagattttgtaggattgtgtt 2736189  T

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Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 12330264 - 12330201
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||  |||| |||||| |||| ||||||| |||||||||    
T  12330264 ctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgtt 12330201  T

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Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 6400932 - 6400874
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggt 225  Q
    ||||||||| ||||||||||||| |||||| |||| |||||| |||| |||||||||||    
T  6400932 cctgacaatatgtttataagtggaggcaatcctcacctcacaagccggttttgtggggt 6400874  T

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Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 30256578 - 30256640
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||| |||||||||| |||| ||||||  ||| |||||||||||||||||    
T  30256578 tgacaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgtt 30256640  T

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Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 6054413 - 6054465
Alignment:
Q  179 tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| |||| ||||||  |||||||||| ||||||||||    
T  6054413 tttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgtt 6054465  T

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Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 6400706 - 6400642
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||| |||||| ||||  ||||| | || |||||||||||||||||    
T  6400706 cctgacaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgtt 6400642  T

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Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 4906773 - 4906868
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| ||  || |   | |||||| |||||||||||| ||||||| ||||||||||| |||  |||| |||| |||||||    
T  4906773 tgttaagagttccacatcggataagagattgtcggacaatgtgtttataagtgagggcaatcctcatctcacaagccagttttatgggattgtgtt 4906868  T

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Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 8026622 - 8026666
Alignment:
Q  187 tgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||    
T  8026622 tgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 8026666  T

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Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 19639199 - 19639135
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||||| |||| |||| ||||||  ||| ||| |||||| ||||||    
T  19639199 cctgacaatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgtt 19639135  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 33494741 - 33494837
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaatt-ctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || ||  |||||||| | |||||||||||||   ||| |||| |||||| |||| |||| ||||||||||||    
T  33494741 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtggggattattcctcacctcacaagccggttttatggggttgtgtt 33494837  T

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Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 17469784 - 17469880
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  17469784 ctgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 17469880  T

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Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 17477032 - 17477127
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  17477032 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 17477127  T

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Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 19256703 - 19256608
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  19256703 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 19256608  T

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Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 39743496 - 39743591
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||||||    
T  39743496 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgtt 39743591  T

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Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 19256938 - 19256842
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  19256938 ctgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgtt 19256842  T

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Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24075423 - 24075328
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  24075423 tgttaagagtcccacatcggttaggagttggcctgacactttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 24075328  T

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Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 42846729 - 42846627
Alignment:
Q  130 acactctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgg-gggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    ||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||| ||||||||||||||    
T  42846729 acactctgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgt 42846630  T
Q  229 gtt 231  Q
    |||    
T  42846629 gtt 42846627  T

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Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 4828039 - 4828130
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||    
T  4828039 aagagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgtt 4828130  T

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Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 4828264 - 4828355
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  4828264 aagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 4828355  T

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Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 34842645 - 34842740
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||| || |||||||||||||||||    
T  34842645 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgtt 34842740  T

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Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 34843084 - 34843179
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  || |||||||||||||||||||| ||||| |||| |||||| |||| |||||||||||||||||    
T  34843084 tgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggggttgtgtt 34843179  T

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Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 26800624 - 26800534
Alignment:
Q  141 agagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| |||| | |||| |||| |||||||||||||||||    
T  26800624 agagtcccacatcggttagaagttggcctgataatttgtctataagtgggggcaatcctcaccacacaagccggttttgtggggttgtgtt 26800534  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 7267583 - 7267487
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  |||||||||||| ||||| | ||||||||||||||||||||||||||||  ||| |||||| |||| |||||| ||||||||||    
T  7267583 ctgttaagagtcacacatcggttaggagttggcttgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtagggttgtgtt 7267487  T

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Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 20702763 - 20702859
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||| ||||||||| | |||| ||||||| |||||||||    
T  20702763 tgttaagagtcccacatcggttaggagttggcctgacagtttgtttataagtggggggcaatcctcatctcataagccggttttgtgaggttgtgtt 20702859  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24532538 - 24532443
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || || ||||||||| ||||||||||||||||||||  ||| |||||| |||| |||||||||||||||||    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgtt 24532443  T

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Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 39053046 - 39052951
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 39052951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 39984782 - 39984876
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||  ||||||| |||| |||||  ||||||||||||||||||||||||||||| |||| |||||| |||  |||||||||||||||||    
T  39984782 gttaagagtctcacatcgattaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgtt 39984876  T

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Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 39960158 - 39960254
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || || ||||| ||||||||||||||| ||||||||| |||| |||||| |||| |||||||||||||||||    
T  39960158 tgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgtt 39960254  T

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Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 12547066 - 12547160
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  |||||||||| ||||||||| ||||||||  ||| |||||| |||| |||||||||||||||||    
T  12547066 tgttaagagtcccacatcggttaggagttggtctgacaatttatttataagt-ggggcaatcttcacctcacaagccggttttgtggggttgtgtt 12547160  T

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Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35682898 - 35682803
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||  || |  || ||||||||| |||||||||||||||||||| |||| ||| || |||| |||||||||||||||||    
T  35682898 tgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgtt 35682803  T

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Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 12688277 - 12688367
Alignment:
Q  139 taagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||| |||||| || |||||| |||||||||||| |||||||||||||||||||| || | |||||| |||  |||||||||||||||    
T  12688277 taagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtg 12688367  T

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Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 38447513 - 38447449
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  38447513 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 38447449  T

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Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5932066 - 5931971
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | ||| |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||| ||||    
T  5932066 tgttaagagtcccacatcagatagtacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgtt 5931971  T

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Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 11232311 - 11232216
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  11232311 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 11232216  T

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Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 16050228 - 16050322
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||| ||||||||||| |||||||||| || |||| |||| |||| | |||| |||||||||||||||||    
T  16050228 tgttaagagtctcacatcggttaggagttggcctgacaatttatttataagtgaggacaatcctcacctca-aagccggttttgtggggttgtgtt 16050322  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 11232547 - 11232451
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  ||  |||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  11232547 ctgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 11232451  T

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Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35385929 - 35385833
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtg-ggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||| |  ||||| ||| |||||||||||| |||||||| |||| |||| | |||| |||||||||||||||||    
T  35385929 tgttaagagtcccacatcggatagaagatagcctgataatatgtttataagtggggggcaatcctcacctcataagccggttttgtggggttgtgtt 35385833  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 15042787 - 15042692
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||  |  || ||||||||| ||||||||||||||||||||  ||| ||| ||  |||||||||||||||||||||    
T  15042787 tgttaagagtcccacatcggatacgacatggcctgacaatgtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgtt 15042692  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 16050008 - 16050091
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||| ||||| ||||||||||||||||  |||||| |||| |||||| | |  |||||||||||||||||    
T  16050008 cacatcggttaggagttggcctgataatttgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgtt 16050091  T

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Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 34653118 - 34653212
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| |||||| |||||||||||||||||||| | || ||| || |  ||||| |||| |||||||||||||||||    
T  34653118 tgttaagagtctcacatcggttaggagttgatctgacaatttgtttataagt-gaggtaatcctaacatcacaagccggttttgtggggttgtgtt 34653212  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 38476285 - 38476339
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||    
T  38476285 tgtttataagtgggggaaatcctcacctcacaagccgattttgtggggttgtgtt 38476339  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 19472367 - 19472314
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgg 189  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  19472367 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19472314  T

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Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 19543292 - 19543239
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgg 189  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  19543292 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19543239  T

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Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 19589404 - 19589457
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgg 189  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  19589404 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 8929015 - 8929079
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||| |||||||||| | || |||||| |||| |||||||||||||||||    
T  8929015 cctgacaatgtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgtt 8929079  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5590485 - 5590390
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||| ||||||||| ||| || ||  |||||||| |||||| ||||||||||||| ||||  ||||| |||| ||||||| |||||||||    
T  5590485 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtt 5590390  T

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Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 10449967 - 10450062
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| ||| |  || ||||||||| |||||||||||| ||||||| |||| |||| | |||| |||||| ||||||||||    
T  10449967 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgtt 10450062  T

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Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 12317045 - 12317108
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||| | || ||||||||||| |||||||    
T  12317045 ctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgtt 12317108  T

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Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 18939374 - 18939319
Alignment:
Q  176 ttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||| |||| |||||| || ||||||||| |||||||||    
T  18939374 ttgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgtt 18939319  T

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Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 28069474 - 28069379
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||  |  || ||||||||| | |||||||||||||||||| |||| ||||||  | |||||||||| ||||||||    
T  28069474 tgttaagagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgtt 28069379  T

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Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 39984883 - 39984946
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattct 199  Q
    ||||||||||  |||||| ||||| ||||||| | |||||||||||||||||||||| ||||||    
T  39984883 tgttaagagtctcacatcagttaggagttgacataacaatttgtttataagtgggggtaattct 39984946  T

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Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 41790626 - 41790713
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggg 223  Q
    |||||| ||||||||||||  |||  | |||||||||||| ||||||||||||||| |||| |||| |||| | |||| |||||||||    
T  41790626 tgttaaaagttccacatcgaataggtgatgacctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtggg 41790713  T

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Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 38475755 - 38475809
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| |||||| |||| |||||| ||||||||||    
T  38475755 tgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgtt 38475809  T

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Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 42584671 - 42584728
Alignment:
Q  166 acctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggg 223  Q
    |||||||||| |||||||||||||||||||| |||| || ||  ||||||||||||||    
T  42584671 acctgacaatgtgtttataagtgggggcaatactcaccttaccagccgattttgtggg 42584728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 3157677 - 3157581
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtggggg-caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || |||| |||| | |||||||||||||| |||| |||| |||||| |||  |||||||||||||||||    
T  3157677 tgttaagagtcccacatcggataggtgatggcctggcaatgtatttataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgtt 3157581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 5932266 - 5932206
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||||||||||||||||  |||| |||||| |||  |||||||||||||||||    
T  5932266 acaatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgtt 5932206  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 37001462 - 37001526
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||  ||||||||||||||| |||| ||||  ||||| |||| |||||||||||||||||    
T  37001462 cctgacaaagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgtt 37001526  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 422334 - 422239
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||| ||||||||| ||| || ||  |||||||| |||||| |||||| |||||| |||| |||||| |||  |||||||||||| ||||    
T  422334 tgttaaaagtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagccagttttgtggggttatgtt 422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 5675819 - 5675756
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| | | ||||||||| |||||| || |||||||||| ||||||||    
T  5675819 ctgacaatgtgtttataagtagagacaattctcacctcacaagctgattttgtggagttgtgtt 5675756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 20301228 - 20301323
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||| || ||  || || | ||||||| |||||||||||||||||||| || | |||||| |||  ||||||| |||||||||    
T  20301228 tgttaagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgtt 20301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 20515142 - 20515201
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggtt 226  Q
    ||||||||| ||||||||||| |||||||| ||||  ||||| |||| ||||||||||||    
T  20515142 cctgacaatgtgtttataagtcggggcaatcctcacatcacaagccggttttgtggggtt 20515201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 21087860 - 21087955
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||| || ||  || || | ||||||| |||||||||||||||||||| || | |||||| |||  ||||||| |||||||||    
T  21087860 tgttaagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgtt 21087955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 27204975 - 27205026
Alignment:
Q  180 ttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||| |||| |||| | |||| |||||||||||||||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgtt 27205026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 27205073 - 27205124
Alignment:
Q  180 ttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||| |||| |||| | |||| |||||||||||||||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgtt 27205124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 27205171 - 27205222
Alignment:
Q  180 ttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||| |||| |||| | |||| |||||||||||||||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgtt 27205222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 22638255 - 22638201
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||| |||| | |||| |||| |||||||||||||||||    
T  22638255 tgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgtt 22638201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 37001234 - 37001288
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| |||| |||||| |||| |||||||| ||||||||    
T  37001234 tgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgtt 37001288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 422538 - 422473
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtttg 233  Q
    |||||||| ||||||||||||   |||||  ||| |||| | ||||||||||||||||||||||||    
T  422538 ctgacaatatgtttataagtgtatgcaatcatcagctcataagccgattttgtggggttgtgtttg 422473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 3157413 - 3157349
Alignment:
Q  167 cctgacaatttgtttataagtg-ggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||| |||||||| |||| |||||| || | |||||||||||||||||    
T  3157413 cctgacaatgtgtttataagtggggggcaatcctcacctcacaagctg-ttttgtggggttgtgtt 3157349  T

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Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 4873779 - 4873723
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtg 221  Q
    |||||||||||| ||||||||||| | ||||||||||| |||||| |||| |||||||    
T  4873779 tgacctgacaatgtgtttataagt-gtggcaattctcacctcacaagccggttttgtg 4873723  T

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Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 6463188 - 6463249
Alignment:
Q  165 gacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggtt 226  Q
    |||||||||||||||||||||||||||| |||  |||| ||||  |||| ||||||| ||||    
T  6463188 gacctgacaatttgtttataagtgggggtaatcttcatgtcacgagccggttttgtgcggtt 6463249  T

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Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 7729939 - 7729992
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgt 220  Q
    |||||| || |||||||||||||||||||| |||| |||||| |||| ||||||    
T  7729939 cctgaccatgtgtttataagtgggggcaatcctcacctcacaagccggttttgt 7729992  T

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Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 10884062 - 10884119
Alignment:
Q  167 cctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggg 223  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||| |||| |||||||||    
T  10884062 cctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgtggg 10884119  T

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Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 20094876 - 20094819
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    ||||| |||||||| ||||||||||| |||| || ||| |||| ||||||||||||||    
T  20094876 acaatatgtttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgt 20094819  T

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Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 25325612 - 25325705
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    ||||||||||| ||||||||| ||| |  || ||| ||||| |||||||||||||| ||||| |||  |||||| |||  |||||||| |||||    
T  25325612 ctgttaagagtcccacatcggataggacatggcctaacaatgtgtttataagtgggtgcaatcctctcctcacaagccagttttgtggagttgt 25325705  T

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Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 37867908 - 37867863
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtgg 222  Q
    ||||||| ||||||||||||||||| |||||| |||| ||||||||    
T  37867908 tgtttattagtgggggcaattctcacctcacaagccggttttgtgg 37867863  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 39052654 - 39052589
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| ||||||| | |||  | || ||||||||| |||||||||||||||||||| ||||    
T  39052654 tgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggggcaatcctca 39052589  T

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Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 7669640 - 7669680
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||| |||||||||||||||||||| |||| ||||||    
T  7669640 ctgacaatgtgtttataagtgggggcaatcctcacctcaca 7669680  T

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Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 8716116 - 8716176
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||| |||||  |||||| |||| |||| | ||||||||||||||||||||||    
T  8716116 acaatgtgtttaaaagtgaaggcaatcctcacctcataagccgattttgtggggttgtgtt 8716176  T

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Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 18004182 - 18004118
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||||||||||||| |||| | || | | || ||||||| |||||||||    
T  18004182 cctgacaatatgtttataagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgtt 18004118  T

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Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 42049763 - 42049711
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||||||||||||| |||| | |||| |||| ||||||| |||||||    
T  42049763 tgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtg 42049711  T

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Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 21210038 - 21209943
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||    
T  21210038 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgtt 21209943  T

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Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 8098285 - 8098379
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||||| |||| |||||||||||||||||    
T  8098285 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt-ggggcaatcctcacctcacaagccggttttgtggggttgtgtt 8098379  T

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Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 27133110 - 27133015
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||| |||||||||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||    
T  27133110 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgtt 27133015  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 95383 - 95288
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||  | |||||||||||| ||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||    
T  95383 tgttaagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgtt 95288  T

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Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 19522288 - 19522382
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  |||||||||| ||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||    
T  19522288 tgttaagagtcccacatcggttaggagttggactgacaatttatttataagt-ggggcaataatcacctcacaagccgattttgtggggttgtgtt 19522382  T

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Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 24531594 - 24531661
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  24531594 tgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgtt 24531661  T

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Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 42295546 - 42295641
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||| ||||| |||||||||||||||||| ||||| |||| |||||| |||| |||||||| ||||||||    
T  42295546 tgttaagagtcccacatcagttaggagttggcctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgtt 42295641  T

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Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 9368799 - 9368892
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| ||| || || | ||||||| |||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  9368799 ttaagagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaattctcacttcacaagccgattatgtggggttgtgtt 9368892  T

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Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 8081231 - 8081135
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtggggg-caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || ||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||    
T  8081231 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgtt 8081135  T

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Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 8098518 - 8098610
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||| |  | |||| |||| |||||| |||| ||||||||||||||    
T  8098518 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagcgcagacaatcctcacctcacaagccggttttgtggggttgt 8098610  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 6413515 - 6413448
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  6413515 tgacctgacaatgtgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgtt 6413448  T

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Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 13296859 - 13296954
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||  |||| ||||||  ||| ||||||||| |||||||    
T  13296859 tgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgtt 13296954  T

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Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 41666874 - 41666779
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  41666874 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 41666779  T

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Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 41667110 - 41667015
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 41667015  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 17015961 - 17015901
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  17015961 acaatatgtttataagtgagggcaattctcacctcacaagccgattttgtggggttgtgtt 17015901  T

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Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2063850 - 2063756
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||  ||  |||||||| |||||||||||||||||||| |||| |||||| | || |||||||||||||||||    
T  2063850 tgttaagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcctca-ctcacaagtcggttttgtggggttgtgtt 2063756  T

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Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 18333582 - 18333487
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| | ||||||||| ||| || ||  |||||||| |||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  18333582 tgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgtt 18333487  T

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Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24346618 - 24346523
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || ||||||||| |||||||||||||||| ||| |||| |||||| |||| |||| ||||||||||||    
T  24346618 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgtt 24346523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24487762 - 24487667
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| |||||  |||| ||| |||||||||||||||| ||| |||| |||||| |||| ||||||| |||||||||    
T  24487762 tgttaagagtctcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgtt 24487667  T

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Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 24528539 - 24528602
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  24528539 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 24528602  T

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Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 29909604 - 29909509
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||||||||| ||||| ||||||||||| ||||||||||| |||||| |||| ||||||   || ||||||||| |||||||    
T  29909604 tgttaagagtccgacatcggttaggagttggcctgacaatttatttataagtggaggcaatcctcacctcacaaatcggttttgtgggattgtgtt 29909509  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 19522079 - 19522152
Alignment:
Q  161 agttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtttga 234  Q
    ||||| |||| |||||||||||| |||||||||||| |||| |||||| |||| |||||||||||||| |||||    
T  19522079 agttggcctgtcaatttgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttga 19522152  T

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Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 6637804 - 6637876
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||||| ||||||||||||| || |||||||||||| ||| |||||||||| ||||| |||| ||||||    
T  6637804 tgttaagagtcccacatcggttaggagatgacctgacaatgtgtctataagtgggtgcaatcctcacctcaca 6637876  T

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Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 9368561 - 9368657
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||   ||||||| ||| || || | ||||||| ||||||||||||| |||||| |||| |||||| |||| |||||||||||||||||    
T  9368561 ctgttaagagtcatacatcggataggagatggcgtgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgtt 9368657  T

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Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 17352551 - 17352461
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttg 227  Q
    |||||||||| |||||||| | ||| | |||||||||||| ||||||||||||||||||||  ||| |||||| |||| ||||||| |||||    
T  17352551 tgttaagagtcccacatcgataaga-gatgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtgaggttg 17352461  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 28510086 - 28510153
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||||||  |||||| ||||||||| | |||| |||||||||||||||||    
T  28510086 tgacctgacaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgtt 28510153  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 35167484 - 35167417
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||||| |||||||| | |||||||||  |||| ||||||||||||||||    
T  35167484 tgacctgacaatgtgtttataagttggggcaatccccatctcacaaaccgaatttgtggggttgtgtt 35167417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 38731720 - 38731625
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| |||||||||||| ||| || |||||||||||||| |||||||||| | |||||   || |||||| ||||||||| || |||||||||    
T  38731720 tgttaagtgttccacatcggataggagatgacctgacaatttatttataagtgagagcaatcaccacctcacaagccgattttatgaggttgtgtt 38731625  T

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Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 20225021 - 20225103
Alignment:
Q  149 acatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| |||||| |||||||||| | ||||||||| || || |||| |||| |||||| | ||||||||||||||||||||    
T  20225021 acatcggatagaagatgacctgacagtgtgtttataaatgaggacaatcctcacctcacaagtcgattttgtggggttgtgtt 20225103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 8287771 - 8287863
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||  |||||||| ||| |||||  ||| |||||||||||||||| |||||||| | || |||||| |||| |||||||||||||||||    
T  8287771 ttaagagtcacacatcggctaggagttggtctggcaatttgtttataagt-ggggcaatccccacctcacaagccggttttgtggggttgtgtt 8287863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 24270191 - 24270127
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | |||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  24270191 cctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgtt 24270127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 24346823 - 24346759
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | |||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  24346823 cctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgtt 24346759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 29909839 - 29909743
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgttt-ataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| |||||   ||||||||| ||| |||||||| |||||| |||| |||||| |||| |||||||| ||||||||    
T  29909839 tgttaagagtcccacatcagttaggagttggtttgacaattttttttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgtt 29909743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 13296640 - 13296727
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggg 223  Q
    |||||| | ||||||||||||||  |||||   ||||||||| |||||||||||||||||| |||| |||||| |||  |||||||||    
T  13296640 tgttaaaaattccacatcggttaagagttggtttgacaatttatttataagtgggggcaatcctcacctcacaagccagttttgtggg 13296727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 15438876 - 15438939
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||| |||||||||||||||||||| |||| |||||| ||||||||| | ||||||||||    
T  15438876 ctgataatgtgtttataagtgggggcaatcctcacctcacaagccgattttctagggttgtgtt 15438939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 15480321 - 15480384
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| || | |||||||||||| ||||    
T  15480321 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgtt 15480384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 19705870 - 19705965
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  |  ||||||||| |||||||||||||||||||| |||| || | | |||| |||||||| ||||||||    
T  19705870 tgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgtt 19705965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24269987 - 24269893
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| |  || ||||||||| ||||||||||| |||| ||| |||| |||||| |||| |||| ||||||||||||    
T  24269987 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagt-ggggtaatcctcacctcacaagccggttttatggggttgtgtt 24269893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 60095 - 60149
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| |||||| |||| |||||||||||| ||||    
T  60095 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgtt 60149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 7369732 - 7369786
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| | |||| |||||| |||| |||||||||||||||||    
T  7369732 tgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgtt 7369786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 6637570 - 6637646
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccg 213  Q
    |||||||||| ||||||||||||| |  || ||||||||| |||||||||||||||| ||| |||| |||||| ||||    
T  6637570 tgttaagagt-ccacatcggttaggaaatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccg 6637646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 15590183 - 15590236
Alignment:
Q  179 tttataagtgg-gggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||    
T  15590183 tttataagtggagggcaatcctcacctcacaggctgattttgtggggttgtgtt 15590236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 33337355 - 33337270
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtg 221  Q
    |||||||||| |||||| || |||  | || ||||||||| ||||||||||||||||||||  ||| ||||||  |||||||||||    
T  33337355 tgttaagagtcccacattggataggtgatggcctgacaatatgtttataagtgggggcaatcatcacctcacaaaccgattttgtg 33337270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 2062049 - 2061961
Alignment:
Q  142 gagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||| ||||| ||| |||||  || ||||||||| ||||||||||||||||||||  ||| |||||| |||| | ||||| ||||||||    
T  2062049 gagtcccacaccggatagaacatggcctgacaatgtgtttataagtgggggcaatcttcacctcacaagccggtcttgtgtggttgtgt 2061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 13700707 - 13700611
Alignment:
Q  136 tgttaagagttccac-atcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||| ||||| ||| || |||| ||||||| |||||||||||  || ||||||||| |||| | |||| ||||||| |||||||||    
T  13700707 tgttaagagtcccaccatcggataggagatgacttgacaatgtgtttataagtttggacaattctcacctcaaaagccggttttgtgaggttgtgtt 13700611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 25258383 - 25258323
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||| |||||||||||| |||| |||||| | || |||||||||||||||||    
T  25258383 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtt 25258323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 25322173 - 25322113
Alignment:
Q  171 acaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||| |||||||||||| |||| |||||| | || |||||||||||||||||    
T  25322173 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtt 25322113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 43117880 - 43117944
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||| || ||||||| ||||||||||| |||| |||| | ||||||||||    
T  43117880 cctgacaatgtgtttataaatgagggcaatcctcatctcacaagccggttttatagggttgtgtt 43117944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 3859425 - 3859330
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||| ||||| |||||  |||||||| ||| |||||||||||| || |||| |||| |||||| |   ||||||||||||| ||||    
T  3859425 tgttaagagtcccatatcggatagaacatgacctgataatgtgtttataagtgaggacaatcctcacctcacaagttaattttgtggggttatgtt 3859330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 13701183 - 13701120
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||| ||||||||| ||| |  ||| | |||||| |||||||||||||||||||||||||    
T  13701183 ttaagagtcccacatcggataggaaatgatccgacaatgtgtttataagtgggggcaattctca 13701120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 15480555 - 15480621
Alignment:
Q  167 cctgacaatttgtttataagtggggg--caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||  ||||||||||||||||  |||| |||| |||||| |||| |||||||||||||||||    
T  15480555 cctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgtt 15480621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 17150350 - 17150279
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcac 207  Q
    |||||||||||| ||||||| ||| || ||  |||| ||| |||||||||||||||||||| |||| |||||    
T  17150350 tgttaagagttcaacatcggataggagatggtctgaaaatgtgtttataagtgggggcaatcctcacctcac 17150279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 20510759 - 20510664
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||  ||||||||| |||  | || ||||||||| |||||||||||||||||||| |||| |||| |  ||  |||||||| ||||||||    
T  20510759 tgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgtt 20510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 24487600 - 24487553
Alignment:
Q  148 cacatcggttagaagttgacctgacaatttgtttataagtgggggcaa 195  Q
    |||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  24487600 cacatcggttaggagttgatctgacaatatgtttataaatgggggcaa 24487553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 25258163 - 25258116
Alignment:
Q  184 aagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  25258163 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 25258116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 25321953 - 25321906
Alignment:
Q  184 aagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  25321953 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 25321906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 170627 - 170573
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| | |||| |||||| |||| ||||||| |||||||||    
T  170627 tgtttataagtgggggcagtcctcacctcacaagccggttttgtgaggttgtgtt 170573  T

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Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 6919512 - 6919451
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||||||||| ||||||||| |||||| || | ||||||| |||||||||    
T  6919512 tgacaatgtgtttataagtggggacaattctcacctcacaagcag-ttttgtgaggttgtgtt 6919451  T

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Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 26137185 - 26137131
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| |||||||||| |||||||||||  ||| |||||||||||| ||||    
T  26137185 tgtttataaatgggggcaatcctcatctcacaaaccggttttgtggggttatgtt 26137131  T

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Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 30770166 - 30770096
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctca 206  Q
    |||||||||| ||||||||| ||| |  |||||||||||| | |||| ||||||||||||| |||| ||||    
T  30770166 tgttaagagtcccacatcggataggacatgacctgacaatgtttttaaaagtgggggcaatcctcacctca 30770096  T

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Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 33337569 - 33337477
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||| |||  | ||||||||||||    || ||||| |||||||| |||||||||||  ||| |||||||||||||||||    
T  33337569 ctgttaagagtcccacatcggataggtgatgacctgacaat---gttgtaagt-ggggcaatcctcatctcacaaaccggttttgtggggttgtgtt 33337477  T

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Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 21209804 - 21209764
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatt 176  Q
    |||||||||| ||||||||||||| ||||| ||||||||||    
T  21209804 tgttaagagtcccacatcggttaggagttggcctgacaatt 21209764  T

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Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 21306897 - 21306949
Alignment:
Q  179 tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| |||| |||||| |||| | ||||||| |||||||    
T  21306897 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgtt 21306949  T

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Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 21314735 - 21314787
Alignment:
Q  179 tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||| |||| |||||| |||| | ||||||| |||||||    
T  21314735 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgtt 21314787  T

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Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 20327966 - 20327871
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  20327966 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 20327871  T

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Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 1723192 - 1723098
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  1723192 tgttaagagtcccacatcggttaga-gttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 1723098  T

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Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 8018935 - 8019030
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||| |||||| |||| |||||||||||||||||    
T  8018935 tgttaagagtcccacatcggttagaagttggcctgaaaatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgtt 8019030  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 11589752 - 11589847
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  11589752 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 11589847  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 23691309 - 23691216
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  23691309 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23691216  T

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Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 23708109 - 23708016
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  23708109 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23708016  T

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Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 23726565 - 23726472
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  23726565 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23726472  T

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Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 23745021 - 23744928
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  23745021 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23744928  T

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Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 24063546 - 24063453
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  24063546 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 24063453  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 16927066 - 16926971
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||||  || ||||||||| |||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgtt 16926971  T

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Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 17638202 - 17638296
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||||| || | ||||| |||||||||||    
T  17638202 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagt-ggggcaatcctcacctcacaagctggttttgaggggttgtgtt 17638296  T

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Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 27670509 - 27670414
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||| || | ||| |||||||| ||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||    
T  27670509 tgttaagagtcccacatcggtcaggaattggcctgacaaattgtttataagtgggggcaatcctcacctcaaaggccggttttgtggggttgtgtt 27670414  T

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Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 6487450 - 6487358
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| || ||| |||| |||||| |||| |||| |||||||||    
T  6487450 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggaggtaatcctcacctcacaagccggttttatggggttgt 6487358  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9272928 - 9273023
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||||||| | ||| ||||| |||||||||||||||||||||||  |||| |||||| |||| |||||||||||||||||    
T  9272928 tgttaagagtctcacatcggttaggaattggcctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgtt 9273023  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9273162 - 9273257
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| | |||  ||||||||||||||||||||||||||||| ||||  ||||| || | |||||||||||||||||    
T  9273162 tgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtgggggcaatcctcacttcacaagctggttttgtggggttgtgtt 9273257  T

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Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 17638375 - 17638456
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgatttt 218  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  17638375 tgttaagagtcccacatcggttagaagctggcctgacaatttgtttataagt-ggggcaatcctcatctcacaagccggtttt 17638456  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 23708341 - 23708246
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||   ||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| | |||||||    
T  23708341 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgtt 23708246  T

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Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 23726797 - 23726702
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||   ||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| | |||||||    
T  23726797 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgtt 23726702  T

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Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 23745253 - 23745158
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||   ||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| | |||||||    
T  23745253 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgtt 23745158  T

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Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35038311 - 35038216
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  35038311 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgtt 35038216  T

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Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 54368483 - 54368578
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | |||||| || ||||| ||| |||||||||||||||||||| |||| |||||| |||| |||| ||||||||||||    
T  54368483 tgttaagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgtt 54368578  T

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Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 20327731 - 20327636
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| | ||||||||| ||| |  || ||||||||| | |||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  20327731 tgttaagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 20327636  T

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Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 35038545 - 35038450
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||||| |||| || ||| || | |||||||||||||||||    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgtt 35038450  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 28087336 - 28087275
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaatt 197  Q
    ||||||||||  |||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  28087336 tgttaagagtctcacatcggttaggagttggcctaacaatttgtttataagtgggggcaatt 28087275  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 16239825 - 16239889
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| | || |||||||||||||||||    
T  16239825 cctgacaatatgtttataagtgggggcaaatctcacctcacaagtcggttttgtggggttgtgtt 16239889  T

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Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 18757820 - 18757904
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||| |||||||||||| || ||||||||||||||||| || ||||  ||||| | || |||||||||||||||||    
T  18757820 ccacatcggataggagttgacctgactatgtgtttataagtgggggcgatcctcacatcacaaggcggttttgtggggttgtgtt 18757904  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 24063767 - 24063683
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||| ||||   ||||||||||||||||||||||||||||| |||| |||||| |||| ||||||| | |||||||    
T  24063767 ccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgtt 24063683  T

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Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 54567858 - 54567954
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| | | ||||| ||| |  || ||||||||| |||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||    
T  54567858 ctgttaagagtcctatatcggataggacatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgtt 54567954  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 7697514 - 7697420
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || ||||| |||||| |||| |||||||||||||||  ||| |||||| || | |||||||||||||||||    
T  7697514 tgttaagagtcccacatcggataggagatgaccagacaatatgtt-ataagtgggggcaatcatcacctcacaagctggttttgtggggttgtgtt 7697420  T

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Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 16239558 - 16239653
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| ||| |  || ||||||||| |||||||||||||||||||  |||| |||||| |||| ||||||||| |||||||    
T  16239558 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgtt 16239653  T

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Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 472144 - 472082
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| |||||||||||||||||||| || | |||||| |||| |||||||||||||||||    
T  472144 tgacaatgtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttgtgtt 472082  T

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Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 23610447 - 23610393
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||| ||| |||| ||||||||||| |||||||||||||||||    
T  23610447 tgtttataagtgggggtaatcctcaactcacaggccggttttgtggggttgtgtt 23610393  T

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Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 39683385 - 39683292
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttat-aagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||| |||||| |||||| |||| |||||| | || ||||||||| ||||    
T  39683385 tgttaagagtcccacatcggatagatgatgacctgacaatgtgtttataaagtggaggcaatcctcacctcacaagacggttttgtgggattgt 39683292  T

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Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 23691530 - 23691446
Alignment:
Q  147 ccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||| ||||   ||||||||||||||||||||||||||||| |||| |||||| ||||  |||||| | |||||||    
T  23691530 ccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggatttgtgagattgtgtt 23691446  T

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Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 38791568 - 38791472
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||| ||| || ||  |||||||| | |||||||||| || |||| |||| ||||||   ||||||||||||||||||||    
T  38791568 ctgttaagagtcccacatcggataggagatggtctgacaatgtatttataagtgaggacaatcctcacctcacaaatcgattttgtggggttgtgtt 38791472  T

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Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 45138883 - 45138827
Alignment:
Q  172 caatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||||    
T  45138883 caatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgt 45138827  T

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Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 12930217 - 12930150
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| |||| ||| |||||| |||||||||  ||||| |||| |||||||||||||||||    
T  12930217 tgacctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgtt 12930150  T

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Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 22729067 - 22729162
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| ||||| ||||||||| ||| || ||  |||||||| |||||| ||||||||||||| ||||  ||||| |||| ||||||| |||||||||    
T  22729067 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtt 22729162  T

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Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 31317433 - 31317528
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||||| ||| |  |||| ||||||| |||||||||||||||  |||  ||| |||||| |||||||||| |||||||||||    
T  31317433 tgttaagagtcctacatcggataggacatgacatgacaatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgtt 31317528  T

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Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 34610552 - 34610623
Alignment:
Q  161 agttgacctgacaatttgtttataagt-gggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||| |||||| | || |||||||||||||||||    
T  34610552 agttggcctgacaatatgtttataagtggggggcaatcctcacctcacaagtcggttttgtggggttgtgtt 34610623  T

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Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 39269330 - 39269393
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||| ||||| ||| |||||||    
T  39269330 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgtt 39269393  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 45139057 - 45138994
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    ||||||||  |||| ||||||||||||||| |||| |||||| |||| ||||||||||||||||    
T  45139057 cctgacaacgtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgt 45138994  T

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Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 4155332 - 4155386
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| |||| | |||| |||||||||||||||||    
T  4155332 tgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgtt 4155386  T

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Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 20303150 - 20303086
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | |||||||||||||||||| |||| ||||||  ||| ||||||||| |||||||    
T  20303150 cctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgtt 20303086  T

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Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 1800225 - 1800276
Alignment:
Q  179 tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  1800225 tttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgt 1800276  T

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Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 17001506 - 17001443
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||||||||||||  ||| |||| | | |||||||||||||| |||||    
T  17001506 ctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgtt 17001443  T

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Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 39620293 - 39620388
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||  | |||||||||||| |||||||||||||||| ||  | || |||| | |||  |||||||||||||||||    
T  39620293 tgttaagagtctcacatcggataggtgatgacctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgtt 39620388  T

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Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 49629573 - 49629667
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||| || ||| || || | ||| ||| ||||||||||||| |||||| | || ||||||  ||| |||||||||||||||||    
T  49629573 tgttaagagttccacattggataggagatggc-tgaaaatgtgtttataagtggcggcaatccccacctcacaaaccggttttgtggggttgtgtt 49629667  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 13574997 - 13574943
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||| ||| |||| |||||| |||  |||||||||||||||||    
T  13574997 tgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgtt 13574943  T

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Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 45828027 - 45828081
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||||| |||||||||    
T  45828027 tgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgtt 45828081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 50083164 - 50083110
Alignment:
Q  170 gacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtgggg 224  Q
    |||||| |||||||||||||||| ||| |||| |||||| |||| ||||||||||    
T  50083164 gacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgggg 50083110  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 54368691 - 54368761
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||| | ||||||| |||||| || ||||||||| | ||||||||||| |||||| |||| ||||||    
T  54368691 ttaagagtccaacatcggatagaagatggcctgacaatgtatttataagtggtggcaatcctcacctcaca 54368761  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 50930710 - 50930763
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||||||||||||||| |||| ||||||   || ||||||||||||||||    
T  50930710 tgtttataagtgggggcaatcctcacctcacaaaacggttttgtggggttgtgt 50930763  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 4155557 - 4155621
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||||| |||| |||| |||| | |||| |||| | ||||||||||    
T  4155557 cctgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgtt 4155621  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 30179797 - 30179753
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||||||| |||||||||||||||| ||| |||| ||||||    
T  30179797 tgacctgacaatgtgtttataagtgggggtaatcctcacctcaca 30179753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4546 - 4451
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  4546 tgttaagagtgccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 4451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 3588 - 3493
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||  ||| |||||| |||| |||||||||||||||||    
T  3588 tgttaagagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgtt 3493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 3169733 - 3169828
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||||||  ||| |||||| |||| |||||||||||||||||    
T  3169733 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgtt 3169828  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 51588959 - 51589054
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||    
T  51588959 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgtt 51589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 51589193 - 51589288
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||    
T  51589193 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgtt 51589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 28408159 - 28408067
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||| || | |||||| |||| ||||||||||||||    
T  28408159 tgttaagagtcccacatcggttagaagttggtctgacaatttgtttataagtggggacaatccttacctcacaagccggttttgtggggttgt 28408067  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 25137419 - 25137325
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||||  ||||||| |||| |||| | |||| |||||||||||||||||    
T  25137419 gttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtatgggcaatcctcacctcataagccggttttgtggggttgtgtt 25137325  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 12245079 - 12244984
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | |||||| |||| |||||  ||| ||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  12245079 tgttaagagtcctacatcgattaggagttggtctggcaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 12244984  T

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Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 52127688 - 52127782
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||||||||| |||||||| |||| |||||| || | |||||||||||||||||    
T  52127688 tgttaagagtcccacatcggttaggagttgacctaagaatttgtttataagt-ggggcaatcctcacctcacaagctgcttttgtggggttgtgtt 52127782  T

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Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 40079132 - 40079214
Alignment:
Q  149 acatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||| || |||||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  40079132 acatcggataggagatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 40079214  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 3169967 - 3170063
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttg-tttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||||||| |||||  ||||||||||| |||||||||| ||||||| || | |||||| |||| |||||||||||||||||    
T  3169967 tgttaagagtcccacatcggttaggagttggtctgacaatttgttttataagtgagggcaatccttacctcacaagccggttttgtggggttgtgtt 3170063  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 35772231 - 35772326
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||| || || ||||||||| |||||||||||||||||||| || | |||| | |||| |||||||||||||||||    
T  35772231 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgtt 35772326  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 51589805 - 51589868
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||    
T  51589805 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgtt 51589868  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 4113126 - 4113028
Alignment:
Q  133 ctctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||| ||||||||| | | |  || ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  4113126 ctctgttaaaagtcccacatcggatgggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 4113028  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 52650888 - 52650793
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||| |||| ||||||||| ||| || || || |||||| |||||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  52650888 tgttaggagtcccacatcggataggagatggccggacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtt 52650793  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 38668125 - 38668187
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||    
T  38668125 tgacaatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgtt 38668187  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 17452765 - 17452701
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| | |||||||||||||||||| |||| |||||| |||| |||||||||||||||||    
T  17452765 cctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 17452701  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 8870995 - 8870932
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||| ||||||||||||| |||| | |||| |||||||||||||||||    
T  8870995 ctgacaatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgtt 8870932  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 15986450 - 15986355
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| | ||||||| ||| || |  ||||||||| |||||||||||||||||||| |||| |||||| || | | |||||||||||||||    
T  15986450 tgttaagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgtt 15986355  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 17452945 - 17452850
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| ||  |  || ||||||||| | ||||||||||||||||||  ||| |||||| |||| |||||||||||||||||    
T  17452945 tgttaagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgtt 17452850  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 25145837 - 25145742
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| |||  | |||||||||||| | ||||| |||||||||||| |||| |||||| ||||  ||||||||||||||||    
T  25145837 tgttaagagtctcacatcggataggtgatgacctgacaatgtatttattagtgggggcaatcctcacctcacaagccggatttgtggggttgtgtt 25145742  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 16163134 - 16163224
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggtt 226  Q
    |||||||||| ||||||||| |||  | |||| ||||||| ||||||||||||||||||||  ||| ||||||  ||| ||||||||||||    
T  16163134 tgttaagagtcccacatcggataggtgatgacttgacaatgtgtttataagtgggggcaatcttcacctcacaatccggttttgtggggtt 16163224  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 38080570 - 38080666
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||| | | || || ||||||||| ||||||||| | |||||||| |||| |||||| |||  |||||||||||||||||    
T  38080570 tctgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataa-ttggggcaatcctcacctcacaagccagttttgtggggttgtgtt 38080666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 2859506 - 2859414
Alignment:
Q  139 taagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| ||||||||| |||  | || ||||||||| |||||||||||||||||||| || | |||||| |||| || |||| |||||||||    
T  2859506 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatccttacctcacaagccggttctgtgaggttgtgtt 2859414  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 26173574 - 26173478
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||| | ||  || ||  |||||||| ||||||||||||||||||||||||| ||   | |||| |||||||||||||||||    
T  26173574 ctgttaagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgtt 26173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 26865447 - 26865383
Alignment:
Q  164 tgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgt 228  Q
    |||||||||||| | |||||||||||||||||| | || |||||| |||| ||||||||||||||    
T  26865447 tgacctgacaatgtatttataagtgggggcaatccccacctcacaagccggttttgtggggttgt 26865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 41035913 - 41035849
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||| |||| |||||||||||||||||||| |||| |||||| |||| ||||||||| |||||||    
T  41035913 cctgccaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgtt 41035849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 43409773 - 43409868
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||  |||||||| |||||  ||  |||||||| | ||||||||||||| ||||||||| |||||| |||| ||||| |||||||||||    
T  43409773 ctgttaagagtctcacatcggatagaacatggtctgacaatgtatttataagtgggg-caattctcacctcacaagccggttttggggggttgtgtt 43409868  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 51590007 - 51590100
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| ||||| ||||   ||||||||||||||||||||  | ||||| |||| |||||| |||| ||||||||| |||||||    
T  51590007 tgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagt--gagcaatcctcacctcacaagccggttttgtgggattgtgtt 51590100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 25713360 - 25713455
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||||| |||  | ||  |||||||| ||||||||||||||||||||  ||| |||||| |||  |||||||| ||||||||    
T  25713360 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgtt 25713455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 26177110 - 26177205
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  |||||||||||  |||||||||||||||||||| |||| |||| |  ||  |||||||||||||||||    
T  26177110 tgttaagagtcccacatcggacaggacatgacctgacaacgtgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgtt 26177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 35892258 - 35892353
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | || ||| ||  |||||||| | |||||||||||||||||| |||| ||||||  ||| |||||||||||| ||||    
T  35892258 tgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgtt 35892353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 38733381 - 38733444
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||| ||||||| |||| |||| |||||| ||||||| |||||||||    
T  38733381 ctgacaatatgtttataagtgagggcaatcctcacctcataggccggttttgtgaggttgtgtt 38733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 42586555 - 42586461
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||  |||||||| ||  || || ||||||||| ||| ||||||||||| |||| |||| |||||| ||| ||||||||||||||||||    
T  42586555 tgttaagagtctcacatcggataagagatggcctgacaatgtgtatataagtgggg-caatcctcacctcacaagccaattttgtggggttgtgtt 42586461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 52961549 - 52961644
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| || ||||||||| ||| || ||  |||||||| |||||||||||| ||||||| |||| |||| | |||| |||| ||||||||||||    
T  52961549 tgttaagtgtcccacatcggataggagatggtctgacaatgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgtt 52961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 39348428 - 39348374
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| ||||||  ||| |||||||||||||||||    
T  39348428 tgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgtt 39348374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 49142961 - 49143015
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| |||| |||||| ||| |||||||||| |||||||    
T  49142961 tgtttataagtgggggcaatcctcagctcacaagccaattttgtgggattgtgtt 49143015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 20208644 - 20208550
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| ||||||||| ||| |  ||  |||||||| |||||||||||||||||||| |||| |||| || | |  ||||||||||||||||    
T  20208644 ctgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcatagccgg--tttgtggggttgtgtt 20208550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 52907392 - 52907445
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgt 230  Q
    |||||||||||||||||||| |||| |||||| || | ||||||||||||||||    
T  52907392 tgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgt 52907445  T

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Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 7307688 - 7307760
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcaca 208  Q
    |||||||||| | |||||||  | ||| |||||| ||||| ||||||||||||| ||||||||||| ||||||    
T  7307688 tgttaagagtccaacatcggacataagatgacctaacaatgtgtttataagtggaggcaattctcacctcaca 7307760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 26176874 - 26176970
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  || ||||||||| || ||||||||| ||||||| |||| |||| |  ||| |||||||||||||||||    
T  26176874 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgtt 26176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 855948 - 856043
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||| ||| ||| |  || ||||||||| |||||||| |||||| |||| |||| |||||| || | ||||||| | |||||||    
T  855948 tgttaagagttccacaccggataggacatggcctgacaatgtgtttatacgtggggacaatcctcacctcacaagctggttttgtgagattgtgtt 856043  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4112657 - 4112562
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || | ||||||| ||||||||||| ||||||||  ||| |||||| ||||||||| |||| |||||||    
T  4112657 tgttaagagtcccacatcggacaggacatggcatgacaatgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgtt 4112562  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 11924888 - 11924983
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||| |||  | ||  |||||||| |||||||||||||||| | |||||| || |||  ||| ||||||| |||||||||    
T  11924888 tgttaagagttacacatcggataggtgatggtctgacaatatgtttataagtgggggtatttctcaccttacaaaccggttttgtgaggttgtgtt 11924983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 17402712 - 17402751
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctca 206  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  17402712 cctgacaatttgtttataagtgggggcaatcctcacctca 17402751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 17468343 - 17468382
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcac 207  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  17468343 ctgacaatatgtttataagtgggggcaatcctcatctcac 17468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 25145570 - 25145507
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||| |||||||||||| |||| |||||| | || ||||||| |||||||||    
T  25145570 ctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgtt 25145507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 26173309 - 26173254
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggg 223  Q
    |||||||| ||||||||||||||||||||  ||| |||||| |||| |||||||||    
T  26173309 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggg 26173254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 30369802 - 30369897
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||||||||| ||  || ||  | |||||| ||||||||||| |||||||| |||| |||||| |    |||||||||||||||||    
T  30369802 tgttaagagttccacatcggatatgagatggtccgacaatatgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgtt 30369897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 31181626 - 31181535
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||||| || ||  || || |||||  || |||||||||||||||||||| |||| |||||| || | |||| ||||||||||||    
T  31181626 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgtt 31181535  T

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Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 39348232 - 39348141
Alignment:
Q  140 aagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||| ||| || |  ||||||||| ||||||||||||| |||||| |||| || ||  |||| || ||||||||||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtgtttataagtggaggcaatcctcaacttaccagccggttctgtggggttgtgtt 39348141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 35303558 - 35303492
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    ||||||||||| ||||||||| |||||  ||| |||||||| | ||||||||||| | |||||||||    
T  35303558 ctgttaagagtcccacatcggatagaacatgatctgacaatgtatttataagtggagacaattctca 35303492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 47370775 - 47370718
Alignment:
Q  174 atttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||||  |||| ||||||||||||||| || || |||||||| |||||||    
T  47370775 atttgtttataagcaggggtaattctcatctcacaagcagaatttgtgggattgtgtt 47370718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 51459947 - 51459882
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctca 201  Q
    |||||||||| ||||||||| |||  | || ||| ||||| |||||||||||||||||||| ||||    
T  51459947 tgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtgggggcaatcctca 51459882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 16162931 - 16162995
Alignment:
Q  167 cctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||| ||||| ||||||||| |||  |||| |||| |  |||||||||||||||||||||    
T  16162931 cctgacaatgtgtttttaagtggggacaaacctcacctcataaaccgattttgtggggttgtgtt 16162995  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 29898920 - 29898972
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    |||||||||||| |||||||||||| | |||| |||| ||||||| |||||||    
T  29898920 tgtttataagtgagggcaattctcaccacacaagccggttttgtgaggttgtg 29898972  T

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Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 56424 - 56521
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||||| || |||||||  ||| |||||| |||| |||||||||||||||||    
T  56424 tctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgtt 56521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 6273 - 6336
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  6273 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgtt 6336  T

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Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 5622 - 5717
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| ||||||| | |||||| || | ||||||| |||||||||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  5622 tgttaagagtcccacatcagatagaagatggcatgacaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgtt 5717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 5857 - 5952
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||| ||||||||||||| |||||| || | ||||||| |||||||||||| || |||| |||| ||  || |||||||||||  |||||||||    
T  5857 tgttaacagttccacatcggatagaagatggcatgacaatatgtttataagtgaggacaatcctcacctttcaagccgattttgttaggttgtgtt 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 5839 - 5776
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||    
T  5839 ctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgtt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 5628 - 5566
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| |||||||||||||||||||| ||||  ||||| |||| ||||| |||||||||||    
T  5628 tgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgtt 5566  T

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Target: scaffold0519 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2118 - 2213
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  || |  || ||||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  2118 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 1882 - 1978
Alignment:
Q  135 ctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||||||| |||||||||  || |  ||  |||||||| |||||||||||||||||||| |||| || ||| |||| |||||||||||||||||    
T  1882 ctgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgtt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 69649 - 69557
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtg 229  Q
    ||||||||| ||||| ||| |||||  || ||||||||| |||||||||||||||||||| |||| ||||||  ||| |||| ||||||||||    
T  69649 gttaagagtcccacaacggatagaacatggcctgacaatctgtttataagtgggggcaatcctcacctcacaaaccggttttatggggttgtg 69557  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 81809 - 81904
Alignment:
Q  136 tgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||||| |||||||||  ||||  || ||||||||| ||||||||||||||| ||||| ||| || ||| | || |||||||||||||||||    
T  81809 tgttaagagtcccacatcggacagaacatggcctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgtt 81904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1034
Description:

Target: scaffold1034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 3201 - 3263
Alignment:
Q  134 tctgttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggcaat 196  Q
    |||||||||||| | ||||||||||| ||||| ||| || |||||||||||||||||||||||    
T  3201 tctgttaagagtcctacatcggttaggagttggccttactatttgtttataagtgggggcaat 3263  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 14302 - 14365
Alignment:
Q  168 ctgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||||||||| ||||  ||| |||||| |||| |||||||||||||||||    
T  14302 ctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgtt 14365  T

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Target: scaffold0400 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 3813 - 3907
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtggggg-caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| |||  | || ||||||||| |||| ||||||||||| |||| |||| |||||| |||  |||||||||||||||||    
T  3813 ttaagagtcccacatcggatagctgatggcctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgtt 3907  T

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Target: scaffold0365 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 4457 - 4551
Alignment:
Q  138 ttaagagttccacatcggttagaagttgacctgacaatttgtttataagtggggg-caattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    |||||||| ||||||||| |||  | || ||||||||| |||| ||||||||||| |||| |||| |||||| |||  |||||||||||||||||    
T  4457 ttaagagtcccacatcggatagctgatggcctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgtt 4551  T

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Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 51236 - 51298
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| |||||||||||||||||||| |||| |||||| | |  |||||||||||||||||    
T  51236 tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgtt 51298  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 67493 - 67549
Alignment:
Q  177 tgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtttg 233  Q
    |||||||||||||||||||| |||| || |||  |||||||||||| ||||||||||    
T  67493 tgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtttg 67549  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 12647 - 12709
Alignment:
Q  169 tgacaatttgtttataagtgggggcaattctcatctcacaggccgattttgtggggttgtgtt 231  Q
    ||||||| | |||||| ||||||||||| |||| |||||| | |||||||||| |||||||||    
T  12647 tgacaatgtatttatatgtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgtt 12709  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 429841 - 429898
Alignment:
Q  137 gttaagagttccacatcggttagaagttgacctgacaatttgtttataagtgggggca 194  Q
    ||||||||| ||||||||| |||  | || ||||||||| ||||||||||||||||||    
T  429841 gttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggca 429898  T

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