View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13231_high_1 (Length: 842)

Name: NF13231_high_1
Description: NF13231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13231_high_1
NF13231_high_1
[»] chr8 (24 HSPs)
chr8 (323-744)||(16457861-16458274)
chr8 (20-222)||(16458417-16458619)
chr8 (744-832)||(24995390-24995478)
chr8 (91-209)||(16487348-16487466)
chr8 (744-825)||(31207364-31207445)
chr8 (744-832)||(9519497-9519585)
chr8 (744-832)||(34389000-34389088)
chr8 (744-832)||(16457456-16457543)
chr8 (323-401)||(16487154-16487232)
chr8 (744-832)||(32066290-32066378)
chr8 (754-832)||(37986853-37986931)
chr8 (744-827)||(36630835-36630918)
chr8 (753-832)||(41893396-41893474)
chr8 (757-827)||(15821379-15821449)
chr8 (757-827)||(30236128-30236198)
chr8 (761-824)||(17657005-17657068)
chr8 (769-832)||(20138449-20138512)
chr8 (757-827)||(15906697-15906767)
chr8 (744-832)||(12898269-12898357)
chr8 (770-827)||(32945703-32945760)
chr8 (777-824)||(38577793-38577840)
chr8 (769-815)||(10248565-10248611)
chr8 (757-790)||(33967337-33967370)
chr8 (757-806)||(40531243-40531292)
[»] chr1 (22 HSPs)
chr1 (744-832)||(31585755-31585843)
chr1 (754-832)||(46692814-46692892)
chr1 (744-832)||(41920450-41920538)
chr1 (744-832)||(5389416-5389504)
chr1 (744-832)||(30685899-30685987)
chr1 (744-827)||(24684478-24684561)
chr1 (744-832)||(5459159-5459247)
chr1 (746-825)||(24449932-24450011)
chr1 (757-827)||(24658940-24659010)
chr1 (757-827)||(46814467-46814537)
chr1 (744-825)||(20113523-20113604)
chr1 (757-825)||(19598647-19598715)
chr1 (753-815)||(17033593-17033655)
chr1 (757-821)||(27031846-27031910)
chr1 (757-824)||(7857664-7857731)
chr1 (760-827)||(32864561-32864628)
chr1 (769-827)||(27102214-27102272)
chr1 (757-807)||(27905423-27905473)
chr1 (757-806)||(38544759-38544808)
chr1 (757-815)||(15840924-15840982)
chr1 (757-806)||(6583237-6583286)
chr1 (757-806)||(9313310-9313359)
[»] chr7 (28 HSPs)
chr7 (744-832)||(38306259-38306347)
chr7 (744-835)||(47325877-47325968)
chr7 (744-824)||(10244180-10244260)
chr7 (744-827)||(3419656-3419739)
chr7 (744-826)||(33435107-33435189)
chr7 (744-832)||(5860283-5860371)
chr7 (744-832)||(37794987-37795075)
chr7 (744-827)||(3867114-3867197)
chr7 (744-823)||(41089752-41089831)
chr7 (757-827)||(6584920-6584990)
chr7 (757-827)||(34389973-34390043)
chr7 (761-813)||(3478367-3478419)
chr7 (756-815)||(13311849-13311908)
chr7 (769-832)||(44353559-44353622)
chr7 (757-815)||(6716748-6716806)
chr7 (757-827)||(35745827-35745897)
chr7 (757-815)||(1320805-1320863)
chr7 (757-810)||(46262136-46262189)
chr7 (759-827)||(8745166-8745234)
chr7 (761-824)||(12480901-12480965)
chr7 (757-792)||(9349760-9349795)
chr7 (744-827)||(25160813-25160896)
chr7 (757-792)||(38485567-38485602)
chr7 (757-824)||(48058657-48058724)
chr7 (757-815)||(16828948-16829006)
chr7 (769-815)||(16954676-16954722)
chr7 (758-792)||(17802851-17802885)
chr7 (761-815)||(24324810-24324864)
[»] chr4 (26 HSPs)
chr4 (744-832)||(4305723-4305811)
chr4 (744-827)||(8255025-8255108)
chr4 (744-827)||(8268443-8268526)
chr4 (744-825)||(30964439-30964520)
chr4 (757-827)||(25753183-25753253)
chr4 (745-825)||(30167566-30167646)
chr4 (757-827)||(31050662-31050732)
chr4 (754-827)||(41117967-41118040)
chr4 (757-825)||(53823423-53823491)
chr4 (754-821)||(38637238-38637305)
chr4 (757-815)||(21387216-21387274)
chr4 (757-815)||(22811172-22811230)
chr4 (757-827)||(38929838-38929908)
chr4 (757-817)||(36962626-36962685)
chr4 (756-827)||(46698784-46698856)
chr4 (757-801)||(53756767-53756811)
chr4 (757-816)||(39041285-39041344)
chr4 (757-792)||(40813816-40813851)
chr4 (769-815)||(2792286-2792332)
chr4 (757-815)||(6599957-6600015)
chr4 (757-827)||(28966878-28966948)
chr4 (774-824)||(35341341-35341391)
chr4 (769-827)||(35800512-35800570)
chr4 (754-792)||(39421048-39421086)
chr4 (745-806)||(2061759-2061820)
chr4 (757-790)||(37707392-37707425)
[»] chr2 (17 HSPs)
chr2 (744-832)||(39338860-39338948)
chr2 (757-827)||(7874302-7874372)
chr2 (757-827)||(14405209-14405279)
chr2 (743-832)||(10524094-10524187)
chr2 (744-823)||(387171-387250)
chr2 (757-825)||(1269494-1269562)
chr2 (757-827)||(4471934-4472004)
chr2 (757-825)||(22885135-22885203)
chr2 (757-824)||(13337285-13337352)
chr2 (757-827)||(10173578-10173648)
chr2 (757-827)||(16959993-16960063)
chr2 (757-827)||(15126410-15126480)
chr2 (758-827)||(2062901-2062970)
chr2 (757-792)||(4162055-4162090)
chr2 (769-827)||(7695986-7696044)
chr2 (769-811)||(9560804-9560846)
chr2 (757-806)||(33788653-33788702)
[»] chr3 (25 HSPs)
chr3 (754-832)||(17550965-17551043)
chr3 (744-827)||(19176500-19176583)
chr3 (744-827)||(9584053-9584136)
chr3 (744-823)||(43012373-43012452)
chr3 (744-832)||(2392501-2392589)
chr3 (751-827)||(20611788-20611864)
chr3 (744-825)||(2394255-2394336)
chr3 (744-832)||(34475749-34475837)
chr3 (744-832)||(45163851-45163941)
chr3 (769-823)||(23328354-23328408)
chr3 (757-827)||(40023572-40023642)
chr3 (757-827)||(45398807-45398877)
chr3 (757-827)||(47945717-47945787)
chr3 (763-827)||(1652886-1652950)
chr3 (756-815)||(5556580-5556639)
chr3 (757-827)||(33143948-33144019)
chr3 (757-815)||(19295877-19295935)
chr3 (757-806)||(14755286-14755335)
chr3 (757-801)||(20710734-20710778)
chr3 (757-792)||(14879446-14879481)
chr3 (757-815)||(30127273-30127332)
chr3 (777-832)||(47235729-47235784)
chr3 (757-815)||(2782081-2782139)
chr3 (761-827)||(37123397-37123463)
chr3 (761-827)||(39021276-39021342)
[»] chr5 (13 HSPs)
chr5 (744-827)||(34378096-34378179)
chr5 (744-827)||(18593241-18593324)
chr5 (744-832)||(698359-698447)
chr5 (757-815)||(7195251-7195309)
chr5 (757-827)||(13954234-13954304)
chr5 (757-806)||(33258903-33258952)
chr5 (758-806)||(39184208-39184256)
chr5 (757-827)||(22675324-22675394)
chr5 (757-806)||(7392052-7392101)
chr5 (769-824)||(26045967-26046022)
chr5 (761-811)||(21402853-21402903)
chr5 (757-827)||(27713080-27713150)
chr5 (757-827)||(29087492-29087562)
[»] chr6 (11 HSPs)
chr6 (754-832)||(3117501-3117579)
chr6 (744-824)||(16510304-16510384)
chr6 (760-827)||(20701803-20701870)
chr6 (757-824)||(32935342-32935409)
chr6 (771-815)||(32316393-32316437)
chr6 (757-804)||(26216042-26216089)
chr6 (760-827)||(21266127-21266194)
chr6 (757-804)||(26534742-26534789)
chr6 (761-812)||(34105428-34105479)
chr6 (757-810)||(7546446-7546499)
chr6 (757-806)||(9224052-9224101)
[»] scaffold0200 (1 HSPs)
scaffold0200 (757-827)||(19394-19464)
[»] scaffold0068 (1 HSPs)
scaffold0068 (754-827)||(35772-35844)
[»] scaffold0119 (1 HSPs)
scaffold0119 (757-825)||(42140-42208)
[»] scaffold0499 (1 HSPs)
scaffold0499 (757-824)||(6569-6637)
[»] scaffold1613 (1 HSPs)
scaffold1613 (757-806)||(1038-1087)
[»] scaffold0620 (1 HSPs)
scaffold0620 (757-812)||(3841-3896)
[»] scaffold0050 (1 HSPs)
scaffold0050 (757-812)||(36718-36773)


Alignment Details
Target: chr8 (Bit Score: 307; Significance: 1e-172; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 323 - 744
Target Start/End: Complemental strand, 16458274 - 16457861
Alignment:
323 taaccttggaatgattgatgatagtaactcaagatgaactgattctggtatttggccatctagatcatcaatgttgtttggtgatgaatttcccatataa 422  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| ||||||| ||            |||||||||    
16458274 taaccttggaatgattgatgatagtaaatcaagatgaactgattctggtatttggccatctacaccattaatgttgctt------------cccatataa 16458187  T
423 acaacataaggctacataaaataagagaagctttggtgattttgtcataaaaaataattaaacataaagacatagggaaagt-gtgtgtaatatgaacct 521  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| | |||| |||||||||||||||||    
16458186 acaacataaggctacataaaataagagaagctttggtgattttgtcataaaaaataattaacaataaaggcatagaggaagtagtgtgtaatatgaacct 16458087  T
522 tagcaatttgatctgaaattgct---ctactactactactacatataagaagagaacctagaaagaggagatgaaggaattgtaaaagccactccatttg 618  Q
    ||||||||||||||||||||| |    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
16458086 tagcaatttgatctgaaattgttatattactactactactacatataagaagagaagctagaaagaggagatgaaggaattgtaaaagccactccatttg 16457987  T
619 aagatgatgtgtcaattgcttataatgaatagagctgctcatgcaatcttccatttataggctaagtgtgtgtattttttcttaataaaataagaagggt 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
16457986 aagatgatgtgtcaattgcttataatgaatagagctgctcatgcaatcttccatttaaaggctaagtgtgtgtattttttcttaataaaataagaagggt 16457887  T
719 gttgaagcatgaaacatgtgatggca 744  Q
    ||||||||||||||||||||||||||    
16457886 gttgaagcatgaaacatgtgatggca 16457861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 16458619 - 16458417
Alignment:
20 gacttcacaagaaaacaaaatcaagcacaaaaaatgttaaagaagcaaaggtataggctatagctgaaataaagatgaaataccagctaatgcagaagct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16458619 gacttcacaagaaaacaaaatcaagcacaaaaaatgttaaagaagcaaaggtataggctatagctgaaataaagatgaaataccagctaatgcagaagct 16458520  T
120 tcactttgtgtaagcatggcagtgaatccattaaaggcatgactgtaatggtggataagtgctatcctctcactttcttcactgcgaaaattgaaaaaag 219  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16458519 tcactttgtgtaagcatggcagagaatccattaaaggcatgactataatggtggataagtgctatcctctcactttcttcactgcgaaaattgaaaaaag 16458420  T
220 aga 222  Q
    |||    
16458419 aga 16458417  T

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Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 24995478 - 24995390
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
24995478 aatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 24995390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 16487466 - 16487348
Alignment:
91 aagatgaaataccagctaatgcagaagcttcactttgtgtaagcatggcagtgaatccattaaaggcatgactgtaatggtggataagtgctatcctctc 190  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||| ||||  |||||| |||| |||||| |||||||||| ||||||  |||||||||    
16487466 aagatcaaataccagacaatgcagaagcttcactctgtgtaagcattgcagaaaatccactaaaagcatgattgtaatggtgaataagttttatcctctc 16487367  T
191 actttcttcactgcgaaaa 209  Q
    ||||||||||||| |||||    
16487366 actttcttcactgagaaaa 16487348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 744 - 825
Target Start/End: Complemental strand, 31207445 - 31207364
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
31207445 aatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttggg 31207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 9519497 - 9519585
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||| ||||| |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
9519497 aatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 9519585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 34389088 - 34389000
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||| ||||    
34389088 aatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcagttctttgactcaagttggtttttgggctttgtg 34389000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 16457543 - 16457456
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||    
16457543 aatttgatactatagtttggtggc-cgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttaggctttgtg 16457456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 323 - 401
Target Start/End: Complemental strand, 16487232 - 16487154
Alignment:
323 taaccttggaatgattgatgatagtaactcaagatgaactgattctggtatttggccatctagatcatcaatgttgttt 401  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  | ||| ||||||||||    
16487232 taaccttggaatgattgatgatagtaactcaatatgaactgattctggtatttggtcatcttcaccattaatgttgttt 16487154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 32066378 - 32066290
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| || |||||||||| |||||||||||||||| ||||    
32066378 aatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcagctctttgactccagttggtttttgggctttgtg 32066290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 754 - 832
Target Start/End: Complemental strand, 37986931 - 37986853
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||||||||||| | |||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||    
37986931 tatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttgactcaagttggtttttgtgctttgtg 37986853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 36630835 - 36630918
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| | ||| ||||||||||| ||||||||||| ||||||||||||  || ||||||||||||| |||| |||||||||||    
36630835 aatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttgactctagtttgtttttgggct 36630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 832
Target Start/End: Complemental strand, 41893474 - 41893396
Alignment:
753 ctatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
41893474 ctatagtctggtgggccaaccacttttgattcgagatcgggagtcagttctttgtctcaagtt-gtttttgggctttgtg 41893396  T

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Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 15821449 - 15821379
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||||  ||||||||||||||||||||||| ||| || ||||||||| | |||||||||||||||    
15821449 agtctggtgggctgatcacttttgattcgagatcgggagtcagctctttgacttatgttggtttttgggct 15821379  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 30236198 - 30236128
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||  ||||||| | |||||||||    
30236198 agtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggttttgggct 30236128  T

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Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 761 - 824
Target Start/End: Complemental strand, 17657068 - 17657005
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| | ||||||    
17657068 tggtgggtcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttgg 17657005  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 769 - 832
Target Start/End: Original strand, 20138449 - 20138512
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    ||||||||||||||| |||||||| ||| |||||||||||| | ||||||||||||||| ||||    
20138449 cgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtg 20138512  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 15906697 - 15906767
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| ||||||| |||||||||||||||| ||| |||||||||  ||||||| | |||||||||    
15906697 agtctggtgggccgatcacatttgattcgagatcgggagtcagttctttggttcaagtttggttttgggct 15906767  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 12898357 - 12898269
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| || ||||||||||||   |||||||||||||||||||||| | ||| |||| | | ||||||||||||||| ||||| ||||    
12898357 aatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcagttatctaactcaagttggttttggggctttgtg 12898269  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 827
Target Start/End: Complemental strand, 32945760 - 32945703
Alignment:
770 gatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||||| | |||||||||    
32945760 gatcacttttgattcgagatcgggagtcaattctttgattcaagtttggttttgggct 32945703  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 824
Target Start/End: Complemental strand, 38577840 - 38577793
Alignment:
777 tttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    |||||||||||||||| |||||||||||||  | ||||||||||||||    
38577840 tttgattcgagatcgggagttagttctttggtttaagttggtttttgg 38577793  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 815
Target Start/End: Complemental strand, 10248611 - 10248565
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||    
10248611 cgatcacttttgattcaagatcgggagtcagttctttggctcaagtt 10248565  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 790
Target Start/End: Original strand, 33967337 - 33967370
Alignment:
757 agtctggtgggacgatcacttttgattcgagatc 790  Q
    ||||||||||| ||||||||||||||||||||||    
33967337 agtctggtgggccgatcacttttgattcgagatc 33967370  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Original strand, 40531243 - 40531292
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    |||||| |||| |||||||||||||||||||||||| || ||||| ||||    
40531243 agtctgatgggccgatcacttttgattcgagatcgggagctagttttttg 40531292  T

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Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 31585843 - 31585755
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
31585843 aatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 31585755  T

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Target: chr1; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 754 - 832
Target Start/End: Complemental strand, 46692892 - 46692814
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
46692892 tatagtctggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagttggtttttgggctttgtg 46692814  T

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Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 41920450 - 41920538
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||    
41920450 aatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttgggctttgtg 41920538  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 5389504 - 5389416
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||  ||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||    
5389504 aatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcagttctttgactcaagtttgtttttgggctttgtg 5389416  T

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Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 30685987 - 30685899
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| ||||    
30685987 aatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttgactcaagttggcttttgggctttgtg 30685899  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 744 - 827
Target Start/End: Complemental strand, 24684561 - 24684478
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||| ||| ||||||||||| ||||||||||| ||||||||||||  || ||||||||||||| ||||||||||||||||    
24684561 aatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttgactctagttggtttttgggct 24684478  T

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Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 5459159 - 5459247
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||| ||| | || ||||| |||||||| |||||||||| ||||    
5459159 aatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttgattcaagttgatttttgggctttgtg 5459247  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 746 - 825
Target Start/End: Complemental strand, 24450011 - 24449932
Alignment:
746 tttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    |||| ||||||||| ||||||| ||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||||    
24450011 tttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttgtcttaagttggtttttggg 24449932  T

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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 24658940 - 24659010
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| | |||||||||||||||||||||| ||| || |||||| || |||||||||||||||||    
24658940 agtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggctgaagttggtttttgggct 24659010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 46814537 - 46814467
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| || | |||| ||||||||||||||| ||||    
46814537 agtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggctcaagttggttttttggct 46814467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 744 - 825
Target Start/End: Complemental strand, 20113604 - 20113523
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    |||||| || ||||||||| ||||||||||| ||||||||| ||||||| | | |||||||| ||| |||||||||||||||    
20113604 aatttggtattatagtctgctgggacgatcatttttgattcaagatcgggaatcagttctttaacttaagttggtttttggg 20113523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 757 - 825
Target Start/End: Original strand, 19598647 - 19598715
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||| | |||||||    
19598647 agtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttgactcaagtttgattttggg 19598715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 815
Target Start/End: Original strand, 17033593 - 17033655
Alignment:
753 ctatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||| |||||||||  |||||||    
17033593 ctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttggttcaagtt 17033655  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 821
Target Start/End: Complemental strand, 27031910 - 27031846
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttt 821  Q
    ||||| ||||| |||||||||||||||||||||||  ||| || |||||| ||||||||||||||    
27031910 agtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggctcaagttggtttt 27031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 757 - 824
Target Start/End: Original strand, 7857664 - 7857731
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    ||||||||||| |||||||||||||||||||||||| ||| |  |||||  || ||||||||||||||    
7857664 agtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgctgaagttggtttttgg 7857731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 760 - 827
Target Start/End: Complemental strand, 32864628 - 32864561
Alignment:
760 ctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||| | ||||||||| |||||||||||| |||  ||||||||||||||||| | |||||||||    
32864628 ctggtgggccaatcacttttaattcgagatcggaagtcggttctttgactcaagtttggttttgggct 32864561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 769 - 827
Target Start/End: Original strand, 27102214 - 27102272
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||||||||||||||||| ||| |||||||||  ||||||| | |||||||||    
27102214 cgatcacttttgattcgagatcgggagtcagttctttggatcaagtttggttttgggct 27102272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 807
Target Start/End: Original strand, 27905423 - 27905473
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttga 807  Q
    ||||||||||  |||||||||||||||||||||| | ||||||||||||||    
27905423 agtctggtggaccgatcacttttgattcgagatcagaagttagttctttga 27905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 38544808 - 38544759
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||| ||||| |||||||||||||||||| ||| |||||||||    
38544808 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 38544759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 15840982 - 15840924
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||  ||||||||||||||||||||||| ||| ||||  |||| |||||||    
15840982 agtctggtgggctgatcacttttgattcgagatcgggagtcagtttcttgattcaagtt 15840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 6583286 - 6583237
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||  |||||||||||||||||||||||| ||| | |||||||    
6583286 agtctggtggaccgatcacttttgattcgagatcggcagtcaattctttg 6583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 9313359 - 9313310
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||| |||||  ||||||||||||||||||||||| ||| |||||||||    
9313359 agtctagtgggctgatcacttttgattcgagatcgggagtcagttctttg 9313310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 4e-28; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 38306259 - 38306347
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||    
38306259 aatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttgactcaagttggtttttgggctttgtg 38306347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 744 - 835
Target Start/End: Complemental strand, 47325968 - 47325877
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtgctg 835  Q
    |||||| ||||||||||||||||| ||||| ||||||||| |||||||| ||| || ||||||||||||||||||||||||||| |||||||    
47325968 aatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcagctctttgactcaagttggtttttgggctttgtgctg 47325877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 744 - 824
Target Start/End: Original strand, 10244180 - 10244260
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    |||||| | ||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
10244180 aatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttagtttttgg 10244260  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 744 - 827
Target Start/End: Complemental strand, 3419739 - 3419656
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||| ||| |||||||  ||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
3419739 aatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggct 3419656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 744 - 826
Target Start/End: Original strand, 33435107 - 33435189
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggc 826  Q
    |||||| ||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||| |||| |||||    
33435107 aatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtctcaagttcgtttgtgggc 33435189  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 5860371 - 5860283
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| |||||||||| |||||| | ||| |||||||||||||||||| ||| | ||||||||| |||||||||||||||||| ||||    
5860371 aatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttgacgcaagttggtttttgggctttgtg 5860283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 37794987 - 37795075
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| || |||||| ||||||| || ||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||    
37794987 aatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttgagtcaagttggtttttgggctttgtg 37795075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 3867114 - 3867197
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||| | | |||||||  ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
3867114 aatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttgactcaagttggtttttgggct 3867197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 744 - 823
Target Start/End: Complemental strand, 41089831 - 41089752
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttg 823  Q
    |||||| ||||| ||||||||||  ||||||||||||||||||||| || ||| || |||||||||||||||||||||||    
41089831 aatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcagctctttgactcaagttggtttttg 41089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 6584920 - 6584990
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||||| || |||||||||||||||||    
6584920 agtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggct 6584990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 34389973 - 34390043
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||||| || |||||||||||||||||    
34389973 agtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggct 34390043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 761 - 813
Target Start/End: Original strand, 3478367 - 3478419
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaag 813  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
3478367 tggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaag 3478419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 756 - 815
Target Start/End: Original strand, 13311849 - 13311908
Alignment:
756 tagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||  |||||||    
13311849 tagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtt 13311908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 769 - 832
Target Start/End: Complemental strand, 44353622 - 44353559
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    ||||||||||||||| |||||||| ||| |||||||||||| | ||||||||||||||| ||||    
44353622 cgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtg 44353559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 6716806 - 6716748
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||||||| ||||||||    
6716806 agtctggttggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 6716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 35745897 - 35745827
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||  ||||||||||||||||||||||| ||| |  |||||| ||||||||||||||||||||    
35745897 agtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggctcaagttggtttttgggct 35745827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 815
Target Start/End: Original strand, 1320805 - 1320863
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||| |||||||||||||||| | ||||| ||| ||||||||| ||||||||    
1320805 agtctggtgggccgatcacttttgattcaaaatcggaagtcagttctttggctcaagtt 1320863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 757 - 810
Target Start/End: Complemental strand, 46262189 - 46262136
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactc 810  Q
    ||||||||||| |||||||||||||||||||||||| || |||||  |||||||    
46262189 agtctggtgggccgatcacttttgattcgagatcgggagctagtttcttgactc 46262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 827
Target Start/End: Original strand, 8745166 - 8745234
Alignment:
759 tctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||| |||||||||||||||||||||||| | | ||||| |||  ||||||| | |||||||||    
8745166 tctggtgggccgatcacttttgattcgagatcgggattcagttcgttggatcaagtttggttttgggct 8745234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 824
Target Start/End: Original strand, 12480901 - 12480965
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaag-ttggtttttgg 824  Q
    ||||||| ||||| |||||||||||||||||| ||| |||||||||  ||||| |||||||||||    
12480901 tggtgggccgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggtttttgg 12480965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 9349760 - 9349795
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||||||||| ||||||||||||||||||||||||    
9349760 agtctggtgggccgatcacttttgattcgagatcgg 9349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 25160813 - 25160896
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| | ||||||||||||||  |||| ||||||||||||||||||| ||| |  ||||  | | |||||||||||||||||    
25160813 aatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatcttgaaattaagttggtttttgggct 25160896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 38485567 - 38485602
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||||||||| ||||||||||||||||||||||||    
38485567 agtctggtgggccgatcacttttgattcgagatcgg 38485602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 824
Target Start/End: Complemental strand, 48058724 - 48058657
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    ||||||||||| ||||| ||||||||| |||||||| ||| |||| |||| |||||||| | ||||||    
48058724 agtctggtgggtcgatcgcttttgatttgagatcggaagtcagttttttggctcaagtttggttttgg 48058657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 16829006 - 16828948
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||| ||  ||||||||||| ||||||||||  ||| ||||||||||||||||||    
16829006 agtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16828948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 815
Target Start/End: Original strand, 16954676 - 16954722
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||    
16954676 cgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16954722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 17802885 - 17802851
Alignment:
758 gtctggtgggacgatcacttttgattcgagatcgg 792  Q
    |||||||||| ||||||||||||||||||||||||    
17802885 gtctggtgggccgatcacttttgattcgagatcgg 17802851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 815
Target Start/End: Complemental strand, 24324864 - 24324810
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||| |||||| ||||||||||||||||| ||| | ||||||| ||||||||    
24324864 tggtgggccgatcaattttgattcgagatcgggagtcaattctttggctcaagtt 24324810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 4305723 - 4305811
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||    
4305723 aatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttgtctcaagttggtttttaggctttgtg 4305811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 8255025 - 8255108
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||| ||||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||    
8255025 aatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggct 8255108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 8268443 - 8268526
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||| ||||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||    
8268443 aatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggct 8268526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 744 - 825
Target Start/End: Original strand, 30964439 - 30964520
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    |||||| ||||||| |||| |||| ||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||    
30964439 aatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccgttctttgactcaagttggtttttggg 30964520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 25753183 - 25753253
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
25753183 agtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttgattttgggct 25753253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 745 - 825
Target Start/End: Complemental strand, 30167646 - 30167566
Alignment:
745 atttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||| || |||||||  ||||| |||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||    
30167646 atttggtattatagtcaagtgggtcgatcacttttgattcgagatcgggagtcggttctttgactcaagttgatttttggg 30167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 31050732 - 31050662
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||  |  ||||||||||||||||    
31050732 agtctggtgggccgatcacttttgattcgagatcggaagttaggtctttggtttgagttggtttttgggct 31050662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 754 - 827
Target Start/End: Complemental strand, 41118040 - 41117967
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||| |||| ||||||||||||||||||||||| ||| ||||||||| ||||| || | |||||||||    
41118040 tatagtctggagggaagatcacttttgattcgagatcggaagtaagttctttggctcaaattaggttttgggct 41117967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 825
Target Start/End: Complemental strand, 53823491 - 53823423
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||||||||  | |||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||    
53823491 agtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttggg 53823423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 754 - 821
Target Start/End: Complemental strand, 38637305 - 38637238
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttt 821  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| | ||||||| || |||| ||||||    
38637305 tatagtctggcgggccgatcacttttgattcgagatcgggagtcaattctttggcttaagtaggtttt 38637238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 21387274 - 21387216
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||  |||||||||||||||||||||||| ||| ||||||| || |||||||    
21387274 agtctggtggaccgatcacttttgattcgagatcggaagtcagttcttcgattcaagtt 21387216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 22811230 - 22811172
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||| |||||| |||| |||||||||||| ||| ||||||||| ||||||||    
22811230 agtctggtgggccgatcattttttattcgagatcgggagtcagttctttggctcaagtt 22811172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 38929838 - 38929908
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| |||| ||||||||||||||||||||||   ||| ||||||||| |||||||| | |||||||||    
38929838 agtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggctcaagtttgattttgggct 38929908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 757 - 817
Target Start/End: Complemental strand, 36962685 - 36962626
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttgg 817  Q
    ||||||||||| |||| ||||||||||||||||| | ||| || |||||||||||||||||    
36962685 agtctggtgggccgattacttttgattcgagatcaggagtcag-tctttgactcaagttgg 36962626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 756 - 827
Target Start/End: Complemental strand, 46698856 - 46698784
Alignment:
756 tagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaag-ttggtttttgggct 827  Q
    |||||||||||| ||||  |||||||||||||||||| ||| |||||||||  ||||| || |||||||||||    
46698856 tagtctggtgggccgattgcttttgattcgagatcgggagtcagttctttggttcaagttttgtttttgggct 46698784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 757 - 801
Target Start/End: Original strand, 53756767 - 53756811
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagtt 801  Q
    ||||||||||| |||||||||||||||||||||||| || |||||    
53756767 agtctggtgggccgatcacttttgattcgagatcggaagctagtt 53756811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 816
Target Start/End: Complemental strand, 39041344 - 39041285
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttg 816  Q
    ||||||||||| |||||||||||||||||||||| | ||| ||||  | |||||||||||    
39041344 agtctggtgggccgatcacttttgattcgagatcaggagtcagtttctagactcaagttg 39041285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 40813851 - 40813816
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||||||||| ||||||||||||||||||||||||    
40813851 agtctggtgggccgatcacttttgattcgagatcgg 40813816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 815
Target Start/End: Complemental strand, 2792332 - 2792286
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||    
2792332 cgatcacttttgattcgagatcggaagtcagtttcttgactcaagtt 2792286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 6600015 - 6599957
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||| ||||| ||||||||| |||||||| |||  ||||||||| |||||||    
6600015 agtctggtgggccgatcgcttttgattagagatcgggagtcggttctttgattcaagtt 6599957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 28966878 - 28966948
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||| || |||||  |||||||||||||| || ||| ||||||||| |||||||| | |||||||||    
28966878 agtctggtagggcgatcgtttttgattcgagattgggagtcagttctttggctcaagtttggttttgggct 28966948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 824
Target Start/End: Complemental strand, 35341391 - 35341341
Alignment:
774 acttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    ||||||||| ||||||||| ||| || |||||| |||||||||||||||||    
35341391 acttttgatccgagatcggaagtcagctctttggctcaagttggtttttgg 35341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 827
Target Start/End: Original strand, 35800512 - 35800570
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||| |||||||||||||||||| ||| |||||||||| || |||| | |||||||||    
35800512 cgatcgcttttgattcgagatcggaagtcagttctttgattccagtttggttttgggct 35800570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 754 - 792
Target Start/End: Complemental strand, 39421086 - 39421048
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||| |||||||| ||||||||||||||||||||||||    
39421086 tatagcctggtgggccgatcacttttgattcgagatcgg 39421048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 806
Target Start/End: Complemental strand, 2061820 - 2061759
Alignment:
745 atttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||| |  ||| |||||||||    
2061820 atttgatcctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttg 2061759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 790
Target Start/End: Complemental strand, 37707425 - 37707392
Alignment:
757 agtctggtgggacgatcacttttgattcgagatc 790  Q
    ||||||||||| ||||||||||||||||||||||    
37707425 agtctggtgggccgatcacttttgattcgagatc 37707392  T

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Target: chr2 (Bit Score: 65; Significance: 4e-28; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 39338948 - 39338860
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
39338948 aatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 39338860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 7874302 - 7874372
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
7874302 agtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggct 7874372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 14405209 - 14405279
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||    
14405209 agtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggctcaagttggtttttgggct 14405279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 743 - 832
Target Start/End: Original strand, 10524094 - 10524187
Alignment:
743 caatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagtta----gttctttgactcaagttggtttttgggctctgtg 832  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| |     |||||||||||||||||||||||||||| ||||    
10524094 caatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaatatattctttgactcaagttggtttttgggctttgtg 10524187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 744 - 823
Target Start/End: Original strand, 387171 - 387250
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttg 823  Q
    |||||| ||||| |||||||||||  |||||||||||||| |||||||| ||| | ||||||||||||||||||||||||    
387171 aatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttgactcaagttggtttttg 387250  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 757 - 825
Target Start/End: Original strand, 1269494 - 1269562
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||    
1269494 agtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttggg 1269562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 4471934 - 4472004
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| ||||| | |||||||||||||||| ||| |||||||||| ||||||| |||||||||||    
4471934 agtctggtgggccgatcgcctttgattcgagatcgggagtcagttctttgattcaagtttgtttttgggct 4472004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 757 - 825
Target Start/End: Complemental strand, 22885203 - 22885135
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||  ||||||| | |||||||    
22885203 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtttggttttggg 22885135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 757 - 824
Target Start/End: Original strand, 13337285 - 13337352
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    |||||| |||| |||||||||||||||||| ||||| ||| |||||||||||||||||| | ||||||    
13337285 agtctgatgggccgatcacttttgattcgaaatcggaagtcagttctttgactcaagttaggttttgg 13337352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 10173648 - 10173578
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||| ||||| |||||||||||||||||||||||| ||| |||| |||| |||||||| | |||||||||    
10173648 agtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggctcaagtttggttttgggct 10173578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 16959993 - 16960063
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| ||||| |||||||||||||||||  ||| ||||||||| |||||||| | |||||||||    
16959993 agtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggctcaagtttggttttgggct 16960063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 15126480 - 15126410
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||| ||||||||||||||||| |||  |||||||| |||| ||| | |||||||||    
15126480 agtctggtgggccgatcatttttgattcgagatcgggagtcggttctttggctcatgtttggttttgggct 15126410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 758 - 827
Target Start/End: Original strand, 2062901 - 2062970
Alignment:
758 gtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||| ||||  |||||||||||||||||| ||| || |||||| |||||||| | |||||||||    
2062901 gtctggtgggccgattgcttttgattcgagatcgggagtcagctctttggctcaagtttggttttgggct 2062970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 4162090 - 4162055
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||||||||| ||||||||||||||||||||||||    
4162090 agtctggtgggccgatcacttttgattcgagatcgg 4162055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 827
Target Start/End: Original strand, 7695986 - 7696044
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||||||||||| | ||| ||| ||||||||| |||||||| | |||||||||    
7695986 cgatcacttttgattcgataccgggagtcagttctttggctcaagttaggttttgggct 7696044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 811
Target Start/End: Complemental strand, 9560846 - 9560804
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactca 811  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
9560846 cgatcacttttgattcgagatcgggagctagttttttgactca 9560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 33788702 - 33788653
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||| ||||| ||||||||||||||| || ||| |||||||||    
33788702 agtctggtgggccgatcgcttttgattcgagattgggagtcagttctttg 33788653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 6e-27; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 754 - 832
Target Start/End: Original strand, 17550965 - 17551043
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
17550965 tatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 17551043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 19176500 - 19176583
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| | ||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
19176500 aatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggct 19176583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 744 - 827
Target Start/End: Complemental strand, 9584136 - 9584053
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||| |||||||||||||    
9584136 aatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtctcaagatggtttttgggct 9584053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 744 - 823
Target Start/End: Original strand, 43012373 - 43012452
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttg 823  Q
    |||||| | ||| ||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
43012373 aatttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttg 43012452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 2392589 - 2392501
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| |||||||| |||||||  ||||||||||||||||||||| || ||| ||||||||| || ||||||||||||||||| ||||    
2392589 aatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttgggctttgtg 2392501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 20611788 - 20611864
Alignment:
751 tactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||| || |||| |||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
20611788 tactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttgacttaagttggtttttgggct 20611864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 744 - 825
Target Start/End: Complemental strand, 2394336 - 2394255
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    |||||| |||||||| |||||||  ||||||||||||||||||||| || ||| ||||||||| || |||||||||||||||    
2394336 aatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttggg 2394255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 34475837 - 34475749
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||| ||| |  |||| || | |||||| |||||||||| ||||    
34475837 aatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatcttggaattaagttgatttttgggctttgtg 34475749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 45163851 - 45163941
Alignment:
744 aatttgatactatagtctggtg--ggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||||||| |||  || |||||||||||||||||||||| | ||| |||| |||| || ||||||||||||||||| ||||    
45163851 aatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtcttaagttggtttttgggctttgtg 45163941  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 823
Target Start/End: Complemental strand, 23328408 - 23328354
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttg 823  Q
    |||||||||||||||||||||||| |||||| | |||| ||||||||||||||||    
23328408 cgatcacttttgattcgagatcgggagttagctttttggctcaagttggtttttg 23328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 40023642 - 40023572
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||  |||||||||||||||||||||||| |||   ||||||| || |||||||||||||||||    
40023642 agtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggcttaagttggtttttgggct 40023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 45398807 - 45398877
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||  |||||||||||||||||||||||  ||| || ||||||| | |||||||||||||||||    
45398807 agtctggtggaccgatcacttttgattcgagatcgagagtcagctctttgatttaagttggtttttgggct 45398877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 47945717 - 47945787
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||| |||||| |||||||||||||||||||||||| ||| |||| |||| |||||||| | |||||||||    
47945717 agtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggctcaagtttgattttgggct 47945787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 763 - 827
Target Start/End: Complemental strand, 1652950 - 1652886
Alignment:
763 gtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||| |||||||||||||||||||||| | |||||||||||||  ||||||| | |||||||||    
1652950 gtgggccgatcacttttgattcgagatcaggagttagttctttggttcaagtttggttttgggct 1652886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 756 - 815
Target Start/End: Original strand, 5556580 - 5556639
Alignment:
756 tagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||||||||  |||||||    
5556580 tagtctggtggggcgatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 5556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 33144019 - 33143948
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaag-ttggtttttgggct 827  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||||||||  ||||| || |||||||||||    
33144019 agtctggtggatcgatcacttttgattcgagatcgggagtcagttctttggatcaagattagtttttgggct 33143948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 19295935 - 19295877
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||  ||||||||||||    
19295935 agtctggtgggcctatcacttttgattcgatatcggaagttagtttcttgactcaagtt 19295877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 14755335 - 14755286
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||    
14755335 agtctggtgggccgatcacttttgattcaagatcgggagtcagttctttg 14755286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 757 - 801
Target Start/End: Complemental strand, 20710778 - 20710734
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagtt 801  Q
    ||||||||||| |||||||||||||||||||||||| || |||||    
20710778 agtctggtgggccgatcacttttgattcgagatcgggagctagtt 20710734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 14879446 - 14879481
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcgg 792  Q
    ||||||||||| ||||||||||||||||||||||||    
14879446 agtctggtgggccgatcacttttgattcgagatcgg 14879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 815
Target Start/End: Original strand, 30127273 - 30127332
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttct-ttgactcaagtt 815  Q
    ||||||||| | ||||| |||||||||||||||||| ||| |||||| ||||||||||||    
30127273 agtctggtgagccgatcgcttttgattcgagatcgggagtcagttctcttgactcaagtt 30127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 832
Target Start/End: Original strand, 47235729 - 47235784
Alignment:
777 tttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||||||||||||  |||  ||||||||||| ||||||||||||||||| ||||    
47235729 tttgattcgagatcgagagtcggttctttgacttaagttggtttttgggctttgtg 47235784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 2782139 - 2782081
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||||||||||||||||||  ||||||| ||  |||| ||||||| |||||    
2782139 agtctggtgggacgatcacttttgattttagatcgggagccagttttttgactaaagtt 2782081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 827
Target Start/End: Original strand, 37123397 - 37123463
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||| ||||||||||||||||||||| || ||| |||||||||  |||| || | |||||||||    
37123397 tggtgggccgatcacttttgattcgagattgggagtcagttctttggatcaaatttggttttgggct 37123463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 827
Target Start/End: Complemental strand, 39021342 - 39021276
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||  ||||||  | |||||||||    
39021342 tggtgggccgatcacttttgattcgaggtcgggagtcagttctttggatcaagtctggttttgggct 39021276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 4e-25; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 34378096 - 34378179
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
34378096 aatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgacacaagttggtttttgggct 34378179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 18593241 - 18593324
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| | ||||||| | |||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
18593241 aatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttgactcaagttggtttttgggct 18593324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 744 - 832
Target Start/End: Original strand, 698359 - 698447
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| | ||||||||||||||  ||||| |||||||||||||||||| ||| |  ||||||||||||||||||||||||||| ||||    
698359 aatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttgactcaagttggtttttgggctttgtg 698447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 815
Target Start/End: Complemental strand, 7195309 - 7195251
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    ||||||||| | |||||||||||||||||||||||| ||| ||||||||| ||||||||    
7195309 agtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 7195251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 13954304 - 13954234
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| | | ||||| |||||||| | |||||||||    
13954304 agtctggtgggccgatcacttttgattcgagatcgggagtcattactttggctcaagtttggttttgggct 13954234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 33258952 - 33258903
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||    
33258952 agtctggtgggccgatcacttttgattcgagatcaggagttagttctttg 33258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 806
Target Start/End: Complemental strand, 39184256 - 39184208
Alignment:
758 gtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||||||    
39184256 gtctggtgggccgatcacttttgattcgagatcggaagtcagttctttg 39184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 757 - 827
Target Start/End: Complemental strand, 22675394 - 22675324
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||  |||||  ||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
22675394 agtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggctcaagtttggttttgggct 22675324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 7392101 - 7392052
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||||||||    
7392101 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 7392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 824
Target Start/End: Complemental strand, 26046022 - 26045967
Alignment:
769 cgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    |||||||||||||||||||||||| |||||||  |||| |||||||| | ||||||    
26046022 cgatcacttttgattcgagatcgggagttagtgttttggctcaagtttggttttgg 26045967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 811
Target Start/End: Complemental strand, 21402903 - 21402853
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactca 811  Q
    ||||||| |||||||||||  ||||||||||| ||| ||||||||||||||    
21402903 tggtgggccgatcacttttagttcgagatcgggagtcagttctttgactca 21402853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 27713080 - 27713150
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||| ||||| |||||  ||||||||||||||||| | | ||||||||| |||||||| | |||||||||    
27713080 agtctagtgggccgatcgtttttgattcgagatcgggaatcagttctttggctcaagtttggttttgggct 27713150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 29087492 - 29087562
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||   |||| |||||||||||||||| | ||| |||||||||| |||| ||||||| ||||||    
29087492 agtctggtggactgatcccttttgattcgagatcaggagtcagttctttgaatcaaattggtttctgggct 29087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 4e-22; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 754 - 832
Target Start/End: Original strand, 3117501 - 3117579
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggctctgtg 832  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||    
3117501 tatagtatggtgggccgatcacttttgattcaagatcgggagtcagttctttgactcaagttggtttttgggctttgtg 3117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 744 - 824
Target Start/End: Complemental strand, 16510384 - 16510304
Alignment:
744 aatttgatactatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    |||||| | ||| ||||| ||||| ||||||||||||||||||||| |  ||| |||||||| ||||||||||||||||||    
16510384 aatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttcttttactcaagttggtttttgg 16510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 760 - 827
Target Start/End: Complemental strand, 20701870 - 20701803
Alignment:
760 ctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||| || ||||| | |||||||||    
20701870 ctggtgtgccgatcacttttgattcgagatcgggagttagttctttggcttaagtttggttttgggct 20701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 757 - 824
Target Start/End: Complemental strand, 32935409 - 32935342
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgg 824  Q
    ||||||||||| ||||| |||||||||||||||||| ||| ||||||| |||||||||| | ||||||    
32935409 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttcttggactcaagtttgattttgg 32935342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 815
Target Start/End: Original strand, 32316393 - 32316437
Alignment:
771 atcacttttgattcgagatcggtagttagttctttgactcaagtt 815  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
32316393 atcacttttgattcgagatcggtagtaagttctttgattcaagtt 32316437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 757 - 804
Target Start/End: Complemental strand, 26216089 - 26216042
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctt 804  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||    
26216089 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 827
Target Start/End: Original strand, 21266127 - 21266194
Alignment:
760 ctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||| ||||| |||||||||||||||||| |||||||| | ||  ||||||| | |||||||||    
21266127 ctggtgggccgatcgcttttgattcgagatcgggagttagttatgtggttcaagtttggttttgggct 21266194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 804
Target Start/End: Complemental strand, 26534789 - 26534742
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctt 804  Q
    ||||||||||| ||||||||||||||||||||| || ||| |||||||    
26534789 agtctggtgggccgatcacttttgattcgagattgggagtcagttctt 26534742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 812
Target Start/End: Original strand, 34105428 - 34105479
Alignment:
761 tggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaa 812  Q
    ||||||| |||||||||||||||||||||||| ||| ||||  |||||||||    
34105428 tggtgggccgatcacttttgattcgagatcgggagtcagtttcttgactcaa 34105479  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 810
Target Start/End: Complemental strand, 7546499 - 7546446
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactc 810  Q
    ||||||||||  |||||||||||||||||||||||| || ||||| ||| ||||    
7546499 agtctggtggaccgatcacttttgattcgagatcggaagctagtttttttactc 7546446  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Original strand, 9224052 - 9224101
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    |||||||||||  |||| |||||||||||||||||| ||| |||||||||    
9224052 agtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttg 9224101  T

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Target: scaffold0200 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 757 - 827
Target Start/End: Original strand, 19394 - 19464
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
19394 agtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggct 19464  T

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Target: scaffold0068 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 754 - 827
Target Start/End: Complemental strand, 35844 - 35772
Alignment:
754 tatagtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttgggct 827  Q
    |||||||| ||||| |||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||    
35844 tatagtctagtgggccgatcacttttgattcgagatcgggagtca-ttctttgacttaagttggtttttgggct 35772  T

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Target: scaffold0119 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 757 - 825
Target Start/End: Complemental strand, 42208 - 42140
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaagttggtttttggg 825  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||    
42208 agtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttggg 42140  T

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Target: scaffold0499 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 824
Target Start/End: Original strand, 6569 - 6637
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaag-ttggtttttgg 824  Q
    |||||||||  |||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||    
6569 agtctggtgcaacgatctcttttgattcaagattggtagttagttctttggctcaagtttggtttttgg 6637  T

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Target: scaffold1613 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 1087 - 1038
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttg 806  Q
    ||||||||||| ||||| |||||||||||||||||| ||| |||||||||    
1087 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 1038  T

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Target: scaffold0620 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 812
Target Start/End: Original strand, 3841 - 3896
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaa 812  Q
    ||||||||||| |||||| ||||||||||||||||| ||| ||||  |||||||||    
3841 agtctggtgggccgatcaattttgattcgagatcgggagtcagtttcttgactcaa 3896  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 812
Target Start/End: Original strand, 36718 - 36773
Alignment:
757 agtctggtgggacgatcacttttgattcgagatcggtagttagttctttgactcaa 812  Q
    ||||||| |||  ||||||||||||||||||||||| ||| ||||||||| |||||    
36718 agtctggcgggctgatcacttttgattcgagatcgggagtcagttctttgtctcaa 36773  T

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