View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13232_high_7 (Length: 358)
Name: NF13232_high_7
Description: NF13232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13232_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 16 - 340
Target Start/End: Original strand, 11697341 - 11697665
Alignment:
| Q |
16 |
attagccgaaagaaacttggtacaaacacccgggtttagtttaattgaagcaaagaggaaagtgtacaagtttgtttcacaagacaagtctatacctcaa |
115 |
Q |
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| T |
11697341 |
attagccgaaagaaacttggtacaaacacccgggtttagtttaattgaagcaaagaggaaagtgtacaagtttgtttcacaagacaagtctatacctcaa |
11697440 |
T |
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| Q |
116 |
tggaacataatctatgagatgattcaccaaatggaatggcagttgaaatttgaagggtacataccagatacatcacaagttttgctcgatgtagacgatg |
215 |
Q |
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| T |
11697441 |
tggaacataatctatgagatgattcaccaaatggaatggcagttgaaatttgaagggtacataccagatacatcacaagttttgctcgatgtagacgatg |
11697540 |
T |
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| Q |
216 |
aagaaaagaaagagagattgaaatttcatagtcagaagttagcaattgcttttggactcatacatacatctgagggttctcctttaataataacaagaaa |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
11697541 |
aagaaaagaaagagagattgaaatttcatagtcagaagttagcaattgcttttggactcatacatacatctgagggttctcctttaagaataacaagaaa |
11697640 |
T |
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| Q |
316 |
tcttaggatgtgtagtgactgtcat |
340 |
Q |
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| T |
11697641 |
tcttaggatgtgtagtgactgtcat |
11697665 |
T |
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