View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13234_low_9 (Length: 376)
Name: NF13234_low_9
Description: NF13234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13234_low_9 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 178; Significance: 6e-96; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 11527537 - 11527283
Alignment:
| Q |
11 |
cacagatacacactaaatctttccaccaagcagacttatcactaccaccctctgtttaacagaccc-ttacaccgcaccgaccagacaacacataaaacc |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| || |||||||||| ||||||| |
|
|
| T |
11527537 |
cacagatacacactaaatctttccaccaagcagacttatcactagcaccctccgtttaacagaccccttacaccgcactgagcagacaacacttaaaacc |
11527438 |
T |
 |
| Q |
110 |
acatgccacctctctacctgccccaatcctccaacaccactttttcaacatagcaaaattaaactctcacgtttgtcttaccccaaccctctatactcat |
209 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
11527437 |
acatgccacctctctaccttccccaatcctccaacgccactttttcaacataacaaaattaaactcccacgtttgtgttaccccaaccctctatactcat |
11527338 |
T |
 |
| Q |
210 |
tttccnnnnnnntagaatcgcagttatcccaagaaactttcctatagtcctcagc |
264 |
Q |
| |
|
|| || |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11527337 |
ttcccaaaaaaatagaatcgcagttatcccaataaactttcctatagtcctcagc |
11527283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 11459200 - 11459398
Alignment:
| Q |
14 |
agatacacactaaatctttccaccaagcagacttatcactaccaccctctgtttaacagaccc-ttacaccgcaccgaccagacaacacataaaaccaca |
112 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||| ||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
11459200 |
agatacacactaaatctttccaccaagtagacttatcactaccaccctccgtttaacaaaccccttacacctcaccgagcagacaacacttaaaaccaca |
11459299 |
T |
 |
| Q |
113 |
tgccacctctctacctgccccaatcctccaacaccactttttcaacatagcaaaattaaactctcacgtttgtcttaccccaaccctctatactcattt |
211 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||| |
|
|
| T |
11459300 |
tgccacctctctacctgcccaaatcctccaacaccactttttcaacatagcaaaattaaactccctcgtttgtcttgccccaaccatctatactcattt |
11459398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 11527259 - 11527147
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacatatgtagggaatgatgccaagaaaaacatagggagaa |
363 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
11527259 |
caatttaaaagatattcaatagaggagataatacatgagggagccttgaagaaggaaataacatatgtagggagagatgccaagaaaaacttagggagaa |
11527160 |
T |
 |
| Q |
364 |
tcaatcgaccaac |
376 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
11527159 |
tcaaccgaccaac |
11527147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 40434076 - 40434021
Alignment:
| Q |
266 |
atttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
|||||||| || ||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
40434076 |
atttaaaatagattcaatagaggagatgatacctgagggagccttgaagaaggaaa |
40434021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 7319618 - 7319562
Alignment:
| Q |
272 |
aagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacata |
328 |
Q |
| |
|
||||| ||||||||||||||| ||||| |||||||| ||||||| |||||| ||||| |
|
|
| T |
7319618 |
aagagattcaatagaggagatgatacacgagggagctttgaagatggaaatgacata |
7319562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 32900008 - 32899958
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaagg |
318 |
Q |
| |
|
||||||||| |||||||||||| || |||| |||||||| ||||||||||| |
|
|
| T |
32900008 |
ttaaaagagattcaatagaggaaatgatacctgagggagtcttgaagaagg |
32899958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20509330 - 20509273
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||| ||| |||||||||||||| |||| |
|
|
| T |
20509330 |
caattaaaaagagattcaatagaggagacgatacctgacggagccttgaagaaagaaa |
20509273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 48639483 - 48639426
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||| |||| || |||||||||||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
48639483 |
caattaaaaatagattcaatagaggaaatgatacatgcgggagctttgaagaaggaaa |
48639426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 11465119 - 11465147
Alignment:
| Q |
229 |
gcagttatcccaagaaactttcctatagt |
257 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11465119 |
gcagttatcccaagaaactttcctatagt |
11465147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 11465156 - 11465192
Alignment:
| Q |
340 |
atgccaagaaaaacatagggagaatcaatcgaccaac |
376 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
11465156 |
atgccaagaaaaacttagggagaatcaaccgaccaac |
11465192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 40036008 - 40035954
Alignment:
| Q |
270 |
aaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataa |
324 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
40036008 |
aaaagagattcaatagaggagattatacatgagggagcattgaagaaggaaataa |
40035954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 8249634 - 8249689
Alignment:
| Q |
266 |
atttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
|||||||| || ||||||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
8249634 |
atttaaaatagattcaatagaggagatgatacctgagggagccttgacgaaggaaa |
8249689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 23877940 - 23877887
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||||| || |||||||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
23877940 |
ttaaaagagatttaatagaggcgatgatacatgagggagctttgaagaaggaaa |
23877887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 42456745 - 42456696
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaa |
313 |
Q |
| |
|
|||||||||| || |||||||||||||| ||||| ||| ||||||||||| |
|
|
| T |
42456745 |
caatttaaaatagattcaatagaggagacaatacctgaaggagccttgaa |
42456696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 15772740 - 15772680
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacata |
328 |
Q |
| |
|
|||||| || |||||||||||||| |||| |||||||||||||||| | |||| |||||| |
|
|
| T |
15772740 |
ttaaaatagattcaatagaggagacaatatctgagggagccttgaaggaagaaagaacata |
15772680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 44028566 - 44028515
Alignment:
| Q |
270 |
aaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
44028566 |
aaaagagattcaatagaagagattatacatgatggagccttgaagaaggaaa |
44028515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 39116376 - 39116319
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||| ||||||| |||||||||||||| ||||| ||| ||||||||||| ||||||| |
|
|
| T |
39116376 |
caattaaaaagagattcaatagaggagacaatacctgatggagccttgaaaaaggaaa |
39116319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 10289419 - 10289368
Alignment:
| Q |
270 |
aaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| ||||||||||||| |
|
|
| T |
10289419 |
aaaagagattcaatagaggcgatgatacttgagggagctttgaagaaggaaa |
10289368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 27501156 - 27501199
Alignment:
| Q |
278 |
ttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
27501156 |
ttcaatagaggaaataatacatgcaggagccttgaagaaggaaa |
27501199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 3357898 - 3357933
Alignment:
| Q |
289 |
agataatacatgagggagccttgaagaaggaaataa |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
3357898 |
agataatacatgagggagccttgaagaaggaaataa |
3357933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 33260057 - 33260004
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||||| |||||||||| |||| |||| ||||||||| ||||||||||||| |
|
|
| T |
33260057 |
ttaaaagagattcaatagagaagatgatacctgagggagctttgaagaaggaaa |
33260004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 33280216 - 33280163
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||||| |||||||||| |||| |||| ||||||||| ||||||||||||| |
|
|
| T |
33280216 |
ttaaaagagattcaatagagaagatgatacctgagggagctttgaagaaggaaa |
33280163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 14341540 - 14341583
Alignment:
| Q |
278 |
ttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
14341540 |
ttcaatagaggagatgatacatgtgggagccttgaaaaaggaaa |
14341583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 5497881 - 5497925
Alignment:
| Q |
278 |
ttcaatagaggagataatacatgagggagccttgaagaaggaaat |
322 |
Q |
| |
|
||||||||||||||| |||| ||| ||||| |||||||||||||| |
|
|
| T |
5497881 |
ttcaatagaggagattatacctgatggagctttgaagaaggaaat |
5497925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 328
Target Start/End: Complemental strand, 17110488 - 17110430
Alignment:
| Q |
270 |
aaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacata |
328 |
Q |
| |
|
||||||| || |||||||||||| |||| ||||||||| ||||||||||||||| |||| |
|
|
| T |
17110488 |
aaaagagattgaatagaggagatgatacttgagggagctttgaagaaggaaatatcata |
17110430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 2540733 - 2540790
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||| || ||||||||||| |||| |
|
|
| T |
2540733 |
caatttaaaatagattcaatagaggagacaatacatgtcggggccttgaagaaagaaa |
2540790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 20367335 - 20367393
Alignment:
| Q |
270 |
aaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacata |
328 |
Q |
| |
|
||||||| |||| |||||||||| |||| ||||||||| |||||||||||||| ||||| |
|
|
| T |
20367335 |
aaaagagattcattagaggagatgatacctgagggagctttgaagaaggaaatgacata |
20367393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 41367636 - 41367598
Alignment:
| Q |
284 |
agaggagataatacatgagggagccttgaagaaggaaat |
322 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
41367636 |
agaggaaatgatacatgagggagccttgaagaaggaaat |
41367598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 15028839 - 15028782
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||| |||| || |||||||||||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
15028839 |
caattaaaaatagattcaatagaggaaatgatacatgcgggagctttgaagaaggaaa |
15028782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 8948374 - 8948314
Alignment:
| Q |
268 |
ttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataacata |
328 |
Q |
| |
|
||||||||| || ||||||| ||| |||| ||||||||| ||||||||||||||| |||| |
|
|
| T |
8948374 |
ttaaaagagatttaatagagtcgatgatacctgagggagctttgaagaaggaaatagcata |
8948314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 18342324 - 18342294
Alignment:
| Q |
294 |
atacatgagggagccttgaagaaggaaataa |
324 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
18342324 |
atacatgagggagccttgaagaaggaaataa |
18342294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 19322980 - 19322923
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaa |
321 |
Q |
| |
|
||||| |||| || |||||||||||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
19322980 |
caattaaaaatagattcaatagaggaaatgatacatgcgggagctttgaagaaggaaa |
19322923 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 24534724 - 24534764
Alignment:
| Q |
284 |
agaggagataatacatgagggagccttgaagaaggaaataa |
324 |
Q |
| |
|
|||||||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
24534724 |
agaggagatagtacatgcgagagccttgaagaaggaaataa |
24534764 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 26774604 - 26774551
Alignment:
| Q |
266 |
atttaaaagagtttcaatagaggagataatacatgagggagccttgaagaagga |
319 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| |
|
|
| T |
26774604 |
atttaaaagatattcaatagaagagattatacatgacggagctttgaagaagga |
26774551 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 12911817 - 12911757
Alignment:
| Q |
264 |
caatttaaaagagtttcaatagaggagataatacatgagggagccttgaagaaggaaataa |
324 |
Q |
| |
|
|||||||||| || |||||||||||| || |||| ||||||| |||||||||||||||| |
|
|
| T |
12911817 |
caatttaaaatagattcaatagaggaaatgatacccaagggagctttgaagaaggaaataa |
12911757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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