View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13237_low_15 (Length: 386)
Name: NF13237_low_15
Description: NF13237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13237_low_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 10 - 386
Target Start/End: Original strand, 38550051 - 38550427
Alignment:
| Q |
10 |
aagaaaattcccaattccaattccacctcccccaacccattcccccatgaacgtgaaatgttatcatcgtttatgaaagaatgataataaaaaataaacc |
109 |
Q |
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| T |
38550051 |
aagaaaattcccaattccaattccacctcccccaacccattcccccatgaacgtgaaatgttatcatcgtttatgaaagaatgataataaaaaataaacc |
38550150 |
T |
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| Q |
110 |
atgttgtaataaaatatagaccacgttgtatgtaccaacaagataaatataaactacgttgtaatggctgttcacgatatgagaaatgacagtgataaga |
209 |
Q |
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| T |
38550151 |
atgttgtaataaaatatagaccacgttgtatgtaccaacaagataaatataaactacgttgtaatggctgttcacgatatgagaaatgacagtgataaga |
38550250 |
T |
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| Q |
210 |
ttatttaattatgaaatgaaatatactaaacattaacttttttggacaaaattcttattgtttgatttttaggacaaacttttcacagcccgaataaaac |
309 |
Q |
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| T |
38550251 |
ttatttaattatgaaatgaaatatactaaacattagcttttttggacaaaattcttattgtttgatttttaggacaaacttttcacagcccgaataaaac |
38550350 |
T |
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| Q |
310 |
tttagacgtacacgcaaaaaatacatatattttgtgttgttccgtgttacaattctgaaattgattagaagaattgt |
386 |
Q |
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| T |
38550351 |
tttagacgtacacgcaaaaaatacatatattttgtgttgttccgtgttacaattctgaaattgattagaagaattgt |
38550427 |
T |
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