View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13237_low_16 (Length: 385)
Name: NF13237_low_16
Description: NF13237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13237_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 19 - 375
Target Start/End: Complemental strand, 38037499 - 38037143
Alignment:
| Q |
19 |
aaatctaaatcttgcttacatcgaagtcaagccctaaatgaacataaaagtgaaaaataacttgaacaaattggagacgtgatcaaactcccatctcaat |
118 |
Q |
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| T |
38037499 |
aaatctaaatcttgcttacatcgaagtcaagccctaaatgaacataaaagtgaaaaataacttgaacaaattggagacgtgaccaaactcccatctcaat |
38037400 |
T |
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| Q |
119 |
catcaaaaaatattatattatttgagnnnnnnntcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattc |
218 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037399 |
catcaaaaaatattatattatttgagaaaaaaatcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattc |
38037300 |
T |
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| Q |
219 |
taagtcgaagattgttggnnnnnnnggttaataatcaatgaatgatgaaattggagaaatatggaggaagagttgagatttttatttggtttttgtttag |
318 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
38037299 |
taagtcgaagattgttggaaaaaaaggttaataatcaatgaatgatgaaattggagaaatatggaggaagagctgagatttttatttggtttttgtttag |
38037200 |
T |
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| Q |
319 |
atctatgcttgatagttgaatgtgaaattgtaatgaagatttaggttgttacctttg |
375 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037199 |
atctatgcttgatagttgaatgtgaaattgtaatgaagatttaggttgttacctttg |
38037143 |
T |
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