View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13238_high_22 (Length: 241)
Name: NF13238_high_22
Description: NF13238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13238_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41294753 - 41294906
Alignment:
| Q |
1 |
tatagtaagttcagtgttagtccatatataaatcacaagcattgaaacatatatagttggaaacacataaaactttttctgaaggtataccattaaactt |
100 |
Q |
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| T |
41294753 |
tatagtaagttcagtgttagtccatatataaatcacaagcattgaaacatatatagttggaaacacataaaactttttctgaaggtataccattaaactt |
41294852 |
T |
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| Q |
101 |
tgtgttaactgtaaccaaaagattaaactctcaaattagaagtgctattaaatt |
154 |
Q |
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| T |
41294853 |
tgtgttaactgtaaccaaaagattaaactctcaaattagaagtgctattaaatt |
41294906 |
T |
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