View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13238_low_6 (Length: 533)
Name: NF13238_low_6
Description: NF13238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13238_low_6 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 369; Significance: 0; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 36 - 495
Target Start/End: Complemental strand, 6523587 - 6523130
Alignment:
| Q |
36 |
ttgattgcaaggttggcttcaatagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaaagtatttgaaagagatcattgagctttggcttg |
135 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
6523587 |
ttgattgcaaggttggcttcaatagctgaagaggtttgtttccttgatgtgatttcaaaagttaaaaagtatttgaaagagatcattgagccttggcttg |
6523488 |
T |
 |
| Q |
136 |
atggaacaatcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaaggatgttctgctgactctagttccgctactttttc |
235 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | | || |
|
|
| T |
6523487 |
atggaactttcaaataaaatggatttctatatgatcagaaatggggagatattgttaccaaacaaagatgttctgctgactctagttctgattttggttg |
6523388 |
T |
 |
| Q |
236 |
atagtcttattgtgctcagcttcatcgcgagggatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagctt |
335 |
Q |
| |
|
| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6523387 |
a--gtcttattgttctcagcttcatcgctagggatatttcctttatggtatttctgttcttgtaatgattgatccatattggggtgagaagtataagctt |
6523290 |
T |
 |
| Q |
336 |
caagtttattcactcatggaagattttatgaacttgagcacatgttcgaacccaaatcatatgcatctaaggtgtttcgattgttataaaatgcattctt |
435 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6523289 |
caagtttattcactcatggaagattttatgaacttgagcacatgttcgaacccaaatcatatgcatctaaggtgtttcgattgttataaaatgcattctt |
6523190 |
T |
 |
| Q |
436 |
gagctgtagggttaagggttacaagaattgaaaatggcagataccagaagggagctagtg |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6523189 |
gagctgtagggttaagggttacaagaattgaaaatggcagataccagaagggagctagtg |
6523130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 6526545 - 6526403
Alignment:
| Q |
57 |
atagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaaagtatttgaaagagatcattgagctttggcttgatggaacaatcaaagaaaatg |
156 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| || | |||||||| ||||||||||||||| | || | ||||| |
|
|
| T |
6526545 |
atagcggaagaggtttgtttccttgatgtgattccaaaagttagaaagtatttgaaggaaaccattgagccttggcttgatggaacttttaatggaaatg |
6526446 |
T |
 |
| Q |
157 |
aatttctatatgatcagaaatggggagatattgttaccaaaca |
199 |
Q |
| |
|
|||||| |||||| | ||||||||||||||||| |||||||| |
|
|
| T |
6526445 |
gatttctttatgataaaaaatggggagatattgtaaccaaaca |
6526403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 6465518 - 6465361
Alignment:
| Q |
45 |
aggttggcttcaatagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaaagtatttgaaagagatcattgagctttggcttgatggaacaa |
144 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||||||||| | ||| |||| |||| |||||| || | ||||||| ||||||||||||||| |
|
|
| T |
6465518 |
aggttggctttgattgctgaagaggtttgtttccttgatgtgattccgaaaattaggaagtttttgaaggaaactattgagccttggcttgatggaactt |
6465419 |
T |
 |
| Q |
145 |
tcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaagg |
202 |
Q |
| |
|
| || | ||||| |||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
6465418 |
ttaatggaaatggatttctctatgatggaaaatggggaggaattgttaccaaacaagg |
6465361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 279 - 375
Target Start/End: Complemental strand, 6465287 - 6465191
Alignment:
| Q |
279 |
tatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaacttgagca |
375 |
Q |
| |
|
||||| |||| ||| |||| ||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
6465287 |
tatggaattgctgtgcttgcaaagattgatccaatttggggtaggaagtataagcctcaagcttattcactcatggctgattttatgaacttgagca |
6465191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 1841894 - 1841946
Alignment:
| Q |
57 |
atagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaaagtattt |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
1841894 |
atagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattt |
1841946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 369
Target Start/End: Original strand, 6520785 - 6520887
Alignment:
| Q |
267 |
ggatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatga |
366 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || ||||||| ||||||| |||||||||| ||||| |||| |||||||||||||||| |||| |
|
|
| T |
6520785 |
ggatatttcctttatggtattgctgttcttgctaaacttgatcccgattggggaagaaagtataagcctcaagcttatgcactcatggaagatttcatga |
6520884 |
T |
 |
| Q |
367 |
act |
369 |
Q |
| |
|
||| |
|
|
| T |
6520885 |
act |
6520887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 6528321 - 6528221
Alignment:
| Q |
102 |
aagtatttgaaagagatcattgagctttggcttgatggaacaatcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaag |
201 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||||||||||| |||||| |||| |||||| |||||| | |||||||||| ||| |||| ||||||| |
|
|
| T |
6528321 |
aagtatttgaaggagatgattgagccttggcttgatggaactttcaaaggtaatggatttctctatgataaaaaatggggagggattattacaaaacaag |
6528222 |
T |
 |
| Q |
202 |
g |
202 |
Q |
| |
|
| |
|
|
| T |
6528221 |
g |
6528221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 6473288 - 6473363
Alignment:
| Q |
300 |
aagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaacttgagca |
375 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||||| ||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
6473288 |
aagattgatccagtttggggtaagaaatataagcctcaagcctatgcactcatggaagattttatgaccttgagca |
6473363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 6505653 - 6505527
Alignment:
| Q |
57 |
atagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaaagtatttgaaagagatcattgagctttggcttgatggaacaatcaaagaaaatg |
156 |
Q |
| |
|
|||||||||||||||| ||| | |||| ||| |||||| ||||| | |||||| || | |||||||| ||||||||||||||| | || | ||||| |
|
|
| T |
6505653 |
atagctgaagaggttttcttctttgatgctattgaaaaagtaagaaactttttgaaggaaaccattgagccttggcttgatggaacttttaatggaaatg |
6505554 |
T |
 |
| Q |
157 |
aatttctatatgatcagaaatggggag |
183 |
Q |
| |
|
||||||||||||| | |||||||||| |
|
|
| T |
6505553 |
gatttctatatgataaaaaatggggag |
6505527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 6505419 - 6505297
Alignment:
| Q |
294 |
cttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaacttgagcacatgttcgaacccaaatc |
393 |
Q |
| |
|
||||||||||| |||||| |||||| ||| |||||| ||||| |||||||| ||||||||||||||||||| |||| | |||||| ||||| |
|
|
| T |
6505419 |
cttgtaaagatcgatccaacatggggtaggaaatataaggctcaagcctattcacttgtggaagattttatgaacttaagcatagaatcgaactcaaatt |
6505320 |
T |
 |
| Q |
394 |
atatgcatctaaggtgtttcgat |
416 |
Q |
| |
|
||| || | |||||||||||||| |
|
|
| T |
6505319 |
atacgcgtttaaggtgtttcgat |
6505297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 376
Target Start/End: Complemental strand, 6528160 - 6528050
Alignment:
| Q |
266 |
gggatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatg |
365 |
Q |
| |
|
||||||||| |||||| |||| ||| |||| |||||||||||| ||||||| |||||||||| ||||| |||||| | |||||||||||||| |
|
|
| T |
6528160 |
gggatattttgtttatgcaattgctgtgcttgctaagattgatccagcttggggtaggaagtataaggctcaagcatattcattattggaagattttatg |
6528061 |
T |
 |
| Q |
366 |
aacttgagcac |
376 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6528060 |
aatttgagcac |
6528050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 1831843 - 1831872
Alignment:
| Q |
82 |
atgtgatttcaaaagttagaaagtatttga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
1831843 |
atgtgatttcaaaagttagaaagtatttga |
1831872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 1832028 - 1832107
Alignment:
| Q |
294 |
cttgtaaagattgatccatattggggtgaga-agtataagcttcaagtttattcactcatggaagattttatgaacttgag |
373 |
Q |
| |
|
|||| ||||||||||||| ||||||| ||| ||||||||| ||||| ||||||||||| || |||||||||| |||||| |
|
|
| T |
1832028 |
cttgcaaagattgatccaatttggggt-agagagtataagcctcaagcctattcactcattgaggattttatgaccttgag |
1832107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 6526593 - 6526565
Alignment:
| Q |
18 |
tcttatttttatggaaaattgattgcaag |
46 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
6526593 |
tcttatttttatggaaaattgattgcaag |
6526565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 3 - 210
Target Start/End: Original strand, 35231384 - 35231591
Alignment:
| Q |
3 |
ataacaacgacttcgtcttatttttatggaaaattgattgcaaggttggcttcaatagctgaagaggtttgtttcctcgatgtgatttcaaaagttagaa |
102 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| | |
|
|
| T |
35231384 |
ataacaaggacttcatcttatttttatggaaaattgattgcaaggttggctttgatagctgaagaggtttgtttccttgatgtgattccaaaagttaaga |
35231483 |
T |
 |
| Q |
103 |
agtatttgaaagagatcattgagctttggcttgatggaacaatcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaagg |
202 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||| ||||| ||| ||||||| |||||||| |
|
|
| T |
35231484 |
agtatttgaaagagatcattgagccttggcttgatggagctatcaaagaaaatggatttctatatgatcaggaatggagagtagttgttacaaaacaagg |
35231583 |
T |
 |
| Q |
203 |
atgttctg |
210 |
Q |
| |
|
|||||||| |
|
|
| T |
35231584 |
atgttctg |
35231591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 35243022 - 35243203
Alignment:
| Q |
1 |
caataacaacgacttcgtcttatttttatggaaaattgattgcaaggttggcttcaatagctgaagaggtttgtttcctcgatgtgatttcaaaagttag |
100 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
35243022 |
caataacaaggacttcatcttatttttatggaaaattgattgcatagttggctttgatagctgaagaggtttgtttctttgatgtgattccaaaagttaa |
35243121 |
T |
 |
| Q |
101 |
aaagtatttgaaagagatcattgagctttggcttgatggaacaatcaaagaaaatgaatttctatatgatcagaaatgggga |
182 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
35243122 |
gaagtatttgaaagaggtcattgagctttggcttgatggaactttcaaagaaaatgaatttgtatatgatcaagaatgggga |
35243203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 416
Target Start/End: Original strand, 35231646 - 35231794
Alignment:
| Q |
268 |
gatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaa |
367 |
Q |
| |
|
||||||||||| ||||||||| | |||||||||| |||||||||| ||||||| |||||||||| || | ||||||||| ||| |||| |||||||| |
|
|
| T |
35231646 |
gatatttccttgatggtattgttattcttgtaaacattgatccatgttggggtaagaagtataaatgtcgggcttattcacttatgcaagagtttatgaa |
35231745 |
T |
 |
| Q |
368 |
cttgagcacatgttcgaacccaaatcatatgcatctaaggtgtttcgat |
416 |
Q |
| |
|
||||||||||||||||||||| ||| ||| ||| |||||||||||||| |
|
|
| T |
35231746 |
cttgagcacatgttcgaacccgaattatacacatttaaggtgtttcgat |
35231794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 35244264 - 35244343
Alignment:
| Q |
294 |
cttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaacttgag |
373 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
35244264 |
cttgttaagattgatccaacttggggtaggaagtataaatctcaagcctattcactcatgaaagattttatgaacttgag |
35244343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 388
Target Start/End: Original strand, 9665519 - 9665641
Alignment:
| Q |
266 |
gggatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatg |
365 |
Q |
| |
|
|||||||||||||||||| |||| |||| | || ||| | ||||| |||||||| |||||||||| ||||| |||||||| ||||||||||| || |
|
|
| T |
9665519 |
gggatatttcctttatgggattgctgttatggttaagctcgatcccgattggggtagaaagtataagcctcaagcctattcacttatggaagatttcgtg |
9665618 |
T |
 |
| Q |
366 |
aacttgagcacatgttcgaaccc |
388 |
Q |
| |
|
||||| ||||||||||| ||||| |
|
|
| T |
9665619 |
aacttaagcacatgttcaaaccc |
9665641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 3754043 - 3754144
Alignment:
| Q |
270 |
tatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaact |
369 |
Q |
| |
|
||||| |||||||| |||| |||||||| |||||||||||||| |||||| | |||||||| | |||| ||||||||| || ||||||||||||||| |
|
|
| T |
3754043 |
tattttctttatggaattgctgttcttgcaaagattgatccattttggggacaaaagtataaaccacaagcttattcacttttgcaagattttatgaact |
3754142 |
T |
 |
| Q |
370 |
tg |
371 |
Q |
| |
|
|| |
|
|
| T |
3754143 |
tg |
3754144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 9665386 - 9665454
Alignment:
| Q |
133 |
ttgatggaacaatcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaag |
201 |
Q |
| |
|
|||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
9665386 |
ttgatggaactttcaaagaaaatggatttctgtatgatcagaaatggggaggaattgtaaccaaacaag |
9665454 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 4046195 - 4046094
Alignment:
| Q |
270 |
tatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatgaact |
369 |
Q |
| |
|
||||| |||||||| |||| ||||||| ||| |||||||| | |||||| | |||||||| | |||||||||||||| || ||||||||||||||| |
|
|
| T |
4046195 |
tattttctttatggaattggagttcttgcaaaaattgatccttcttggggacaaaagtataaaccacaagtttattcacttgtgaaagattttatgaact |
4046096 |
T |
 |
| Q |
370 |
tg |
371 |
Q |
| |
|
|| |
|
|
| T |
4046095 |
tg |
4046094 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 46383350 - 46383274
Alignment:
| Q |
300 |
aagattgatccatattggggtgagaagtataagcttcaa-gtttattcactcatggaagattttatgaacttgagca |
375 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||| | ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
46383350 |
aagattgatcctatttggggtaggaagtataagtctcaaagcttattcactcatggaagatattatgaacttgagca |
46383274 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 388
Target Start/End: Original strand, 13536543 - 13536665
Alignment:
| Q |
266 |
gggatatttcctttatggtattgatgttcttgtaaagattgatccatattggggtgagaagtataagcttcaagtttattcactcatggaagattttatg |
365 |
Q |
| |
|
|||||||||||||||||| |||| |||| | || ||| | ||||| |||||||| |||||||||| ||||| |||||||| ||||||||||| || |
|
|
| T |
13536543 |
gggatatttcctttatgggattgctgttatggttaagctcgatcccgattggggtagaaagtataagcctcaagcctattcacttatggaagatttcgtg |
13536642 |
T |
 |
| Q |
366 |
aacttgagcacatgttcgaaccc |
388 |
Q |
| |
|
||||| ||||||||||| ||||| |
|
|
| T |
13536643 |
aacttaagcacatgttcaaaccc |
13536665 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 13536410 - 13536478
Alignment:
| Q |
133 |
ttgatggaacaatcaaagaaaatgaatttctatatgatcagaaatggggagatattgttaccaaacaag |
201 |
Q |
| |
|
|||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
13536410 |
ttgatggaactttcaaagaaaatggatttctgtatgatcagaaatggggaggaattgtaaccaaacaag |
13536478 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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