View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13240_high_13 (Length: 299)
Name: NF13240_high_13
Description: NF13240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13240_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 33633009 - 33632725
Alignment:
| Q |
1 |
aagggtctgatttgtctcattcatcaaacaataagaaaatccatattgatacaatgagaccctctttctccaattgaccaatagatgaacatgtattaga |
100 |
Q |
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| T |
33633009 |
aagggtctgatttgtctcattcatcaaacaataagaaaatccatattgatacaatgagaccctcttgctccaattgaccaatagatgaacatgtattaga |
33632910 |
T |
|
| Q |
101 |
attgaatataatcctatatgccatttctgtttctgttgtttttagaacttgtagatggataaataaaatcctaagcaannnnnnnnnngaaagaaaaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
33632909 |
attgaatataatcctatatgccatttctgtttctgttgtttttagaacttgtagatggataaataaaatcctaagcaattttttttttgaaagaaaaatc |
33632810 |
T |
|
| Q |
201 |
ctaagcaaatttaatgttgctgctaattatatgcttaaaataaaaggtttggcacgcaattgatgatactccacatctcatattt |
285 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33632809 |
ctatgcaaatttaatgttgctgctaattatatgcttaaaataaaaggtttggcacgcaattgatgatactccacatctcatattt |
33632725 |
T |
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