View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13240_low_16 (Length: 268)
Name: NF13240_low_16
Description: NF13240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13240_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 2741323 - 2741567
Alignment:
| Q |
8 |
tgagatgaattagtatatgattttctttaagcttgcgtgtaaaacaaatgtttgaatctcatatctaagattccattgaagaaaataagcatttgaaaaa |
107 |
Q |
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| T |
2741323 |
tgagatgaattagtatatgattttctttaagcttgtgggtaaaacaaatgtttgaatctcatatctaagatttcatcgaataaaataagcagttgaaaaa |
2741422 |
T |
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| Q |
108 |
taacggaga-catgagctgaaacagagtctgtctgtccctgaagtcggatgttcattccagaggtttgggtgaaatttgggttaatggagtttggatagc |
206 |
Q |
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| T |
2741423 |
tagcggagatcatgagctgaaacagagtctgtttgtacctgaagttacatgttcattccagaggtttgagtgaaatttgggttaatggagtttggatagc |
2741522 |
T |
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| Q |
207 |
tgatcaatagtgatcattttgatatataaaagtgagagatgattt |
251 |
Q |
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| T |
2741523 |
tgatcaatagtgatcattttgttatataaaagtgagagacgattt |
2741567 |
T |
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