View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13240_low_30 (Length: 209)
Name: NF13240_low_30
Description: NF13240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13240_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 2743749 - 2743615
Alignment:
| Q |
59 |
tctaggaaaaggatcgctacataaaggtatatcttctatattcaccttacattagtttttcatgnnnnnnnnaaactaacatttgtttttcatgttgaat |
158 |
Q |
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| T |
2743749 |
tctaggaaaaggatcgctacataaaagtatatcttctatattcaccttacattagtttttcatgtttttttcaaac-aacatttgtttttcatgttgaat |
2743651 |
T |
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| Q |
159 |
cttcattatatggtttttactagttgtgtatctgtg |
194 |
Q |
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|||||||||||||||||||||||| |||||| |||| |
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| T |
2743650 |
cttcattatatggtttttactagtagtgtatttgtg |
2743615 |
T |
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