View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13241_high_10 (Length: 474)

Name: NF13241_high_10
Description: NF13241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13241_high_10
NF13241_high_10
[»] chr3 (70 HSPs)
chr3 (10-455)||(50318032-50318469)
chr3 (104-196)||(41505572-41505664)
chr3 (40-191)||(32205610-32205763)
chr3 (104-163)||(42357015-42357074)
chr3 (40-163)||(19149005-19149130)
chr3 (104-163)||(5244310-5244369)
chr3 (104-163)||(27541433-27541492)
chr3 (104-163)||(38926709-38926768)
chr3 (104-163)||(52254069-52254128)
chr3 (104-163)||(52939732-52939791)
chr3 (110-163)||(32924212-32924265)
chr3 (102-163)||(36670945-36671006)
chr3 (104-167)||(288807-288870)
chr3 (104-163)||(20547921-20547980)
chr3 (104-163)||(35597243-35597302)
chr3 (66-168)||(44413848-44413950)
chr3 (104-160)||(45000144-45000200)
chr3 (104-163)||(5114159-5114218)
chr3 (104-163)||(13348065-13348124)
chr3 (104-163)||(33939319-33939378)
chr3 (66-163)||(37302587-37302686)
chr3 (104-163)||(41309198-41309257)
chr3 (104-163)||(44856034-44856093)
chr3 (66-163)||(46623948-46624047)
chr3 (104-163)||(26014893-26014952)
chr3 (104-163)||(42358569-42358628)
chr3 (104-167)||(45711366-45711429)
chr3 (104-163)||(47472410-47472469)
chr3 (104-163)||(51982180-51982239)
chr3 (105-191)||(33791673-33791759)
chr3 (102-152)||(35299816-35299866)
chr3 (104-158)||(44813217-44813271)
chr3 (60-163)||(16969497-16969602)
chr3 (104-157)||(55151654-55151707)
chr3 (40-163)||(35377012-35377139)
chr3 (66-163)||(52326060-52326159)
chr3 (120-163)||(21217609-21217652)
chr3 (120-163)||(23592555-23592598)
chr3 (40-157)||(24256708-24256827)
chr3 (40-128)||(28700475-28700566)
chr3 (104-163)||(37056988-37057047)
chr3 (108-163)||(37503678-37503733)
chr3 (40-152)||(55361175-55361290)
chr3 (32-82)||(38957526-38957576)
chr3 (103-161)||(42889065-42889123)
chr3 (40-92)||(35368625-35368678)
chr3 (104-157)||(44413332-44413385)
chr3 (111-164)||(49087037-49087090)
chr3 (34-66)||(13348178-13348210)
chr3 (32-90)||(11056928-11056987)
chr3 (34-73)||(27541537-27541576)
chr3 (121-163)||(44383287-44383329)
chr3 (35-73)||(52939651-52939689)
chr3 (110-163)||(7934062-7934114)
chr3 (100-157)||(11630687-11630744)
chr3 (106-135)||(13735212-13735241)
chr3 (40-92)||(29057662-29057715)
chr3 (40-92)||(29846895-29846948)
chr3 (32-69)||(36671053-36671090)
chr3 (40-73)||(42357115-42357148)
chr3 (32-69)||(44813129-44813166)
chr3 (40-73)||(45711474-45711507)
chr3 (40-73)||(47472332-47472365)
chr3 (102-158)||(8847189-8847245)
chr3 (41-73)||(16129526-16129558)
chr3 (34-66)||(20275730-20275762)
chr3 (32-79)||(21005192-21005240)
chr3 (104-156)||(32145923-32145975)
chr3 (43-71)||(43333565-43333593)
chr3 (40-91)||(53871037-53871089)
[»] chr2 (63 HSPs)
chr2 (35-163)||(9647142-9647272)
chr2 (66-167)||(43487420-43487523)
chr2 (104-191)||(22416294-22416381)
chr2 (108-168)||(6511336-6511396)
chr2 (104-163)||(9207671-9207730)
chr2 (33-163)||(19633286-19633422)
chr2 (33-163)||(19830187-19830323)
chr2 (105-163)||(42091435-42091493)
chr2 (41-191)||(10060339-10060489)
chr2 (117-196)||(17388501-17388580)
chr2 (66-163)||(18254140-18254239)
chr2 (104-163)||(41042335-41042394)
chr2 (104-163)||(41195665-41195724)
chr2 (104-157)||(1248767-1248820)
chr2 (100-163)||(6049276-6049339)
chr2 (104-163)||(34945021-34945080)
chr2 (104-163)||(42421829-42421888)
chr2 (104-191)||(44287345-44287432)
chr2 (108-163)||(2076654-2076709)
chr2 (104-163)||(9194322-9194381)
chr2 (104-163)||(22888748-22888807)
chr2 (104-163)||(37737902-37737961)
chr2 (104-157)||(9990772-9990825)
chr2 (53-163)||(9760046-9760158)
chr2 (104-163)||(7663997-7664056)
chr2 (120-163)||(25270513-25270556)
chr2 (120-163)||(41056678-41056721)
chr2 (104-163)||(44977430-44977489)
chr2 (104-157)||(3838817-3838870)
chr2 (108-157)||(7698256-7698305)
chr2 (40-73)||(44287475-44287508)
chr2 (40-92)||(45202136-45202189)
chr2 (100-163)||(21611586-21611654)
chr2 (107-163)||(23690439-23690495)
chr2 (120-164)||(33273517-33273561)
chr2 (40-92)||(37737981-37738033)
chr2 (120-163)||(13333101-13333144)
chr2 (104-147)||(19109040-19109083)
chr2 (104-163)||(27490661-27490720)
chr2 (40-79)||(27695975-27696014)
chr2 (104-163)||(32477413-32477472)
chr2 (102-137)||(32944460-32944495)
chr2 (106-164)||(1352472-1352530)
chr2 (31-92)||(15141467-15141529)
chr2 (35-73)||(18254244-18254282)
chr2 (35-65)||(37077787-37077817)
chr2 (40-73)||(3838915-3838948)
chr2 (40-73)||(9760020-9760053)
chr2 (40-73)||(9990694-9990727)
chr2 (34-82)||(10550473-10550522)
chr2 (40-88)||(11828828-11828877)
chr2 (40-69)||(19109132-19109161)
chr2 (106-147)||(22445971-22446012)
chr2 (104-137)||(31578516-31578549)
chr2 (60-134)||(36587430-36587504)
chr2 (102-131)||(44996625-44996654)
chr2 (115-163)||(7502341-7502389)
chr2 (104-164)||(8427634-8427694)
chr2 (100-152)||(33583164-33583216)
chr2 (43-71)||(36180651-36180679)
chr2 (36-72)||(36193760-36193796)
chr2 (60-92)||(39744598-39744630)
chr2 (100-163)||(43075960-43076024)
[»] chr4 (81 HSPs)
chr4 (102-191)||(29531509-29531598)
chr4 (102-191)||(2268410-2268499)
chr4 (108-196)||(46634185-46634273)
chr4 (102-163)||(44539813-44539874)
chr4 (103-167)||(26724899-26724963)
chr4 (104-163)||(24575782-24575841)
chr4 (100-163)||(53801690-53801753)
chr4 (102-167)||(46213049-46213114)
chr4 (104-163)||(23369263-23369322)
chr4 (104-163)||(37297130-37297188)
chr4 (104-163)||(39440565-39440624)
chr4 (104-163)||(42853658-42853717)
chr4 (66-163)||(51986083-51986182)
chr4 (104-162)||(11068769-11068827)
chr4 (104-158)||(43175065-43175119)
chr4 (106-163)||(31641496-31641553)
chr4 (106-163)||(36177989-36178046)
chr4 (40-163)||(50608555-50608680)
chr4 (103-163)||(26492087-26492147)
chr4 (66-163)||(29175268-29175365)
chr4 (102-157)||(5622537-5622592)
chr4 (66-163)||(10250446-10250545)
chr4 (104-163)||(26732306-26732365)
chr4 (104-163)||(37997335-37997394)
chr4 (106-161)||(38134436-38134491)
chr4 (104-163)||(40348875-40348934)
chr4 (32-92)||(7161529-7161589)
chr4 (132-196)||(42360265-42360329)
chr4 (109-163)||(27965073-27965125)
chr4 (104-163)||(56474698-56474757)
chr4 (101-163)||(39478515-39478577)
chr4 (40-134)||(5386387-5386484)
chr4 (108-163)||(15175631-15175686)
chr4 (104-163)||(27051017-27051076)
chr4 (120-163)||(38382418-38382461)
chr4 (104-163)||(39654905-39654964)
chr4 (120-163)||(47181938-47181981)
chr4 (120-163)||(48402128-48402171)
chr4 (32-163)||(19473887-19474020)
chr4 (31-73)||(36177900-36177942)
chr4 (40-73)||(10250550-10250583)
chr4 (100-157)||(11672060-11672117)
chr4 (102-163)||(38376421-38376482)
chr4 (35-92)||(39605977-39606034)
chr4 (122-163)||(56363976-56364017)
chr4 (104-156)||(1816613-1816665)
chr4 (40-92)||(46686248-46686300)
chr4 (104-164)||(50721674-50721734)
chr4 (100-163)||(2575721-2575784)
chr4 (40-82)||(4974114-4974157)
chr4 (104-163)||(12595561-12595620)
chr4 (40-82)||(31413800-31413843)
chr4 (120-163)||(34616658-34616701)
chr4 (104-163)||(38510702-38510761)
chr4 (104-163)||(50831686-50831745)
chr4 (105-163)||(1627489-1627547)
chr4 (102-156)||(22813659-22813713)
chr4 (104-142)||(26910283-26910321)
chr4 (35-73)||(29531640-29531678)
chr4 (32-90)||(41347473-41347531)
chr4 (66-137)||(149441-149514)
chr4 (40-73)||(23369367-23369400)
chr4 (40-92)||(27384190-27384243)
chr4 (40-73)||(27964990-27965023)
chr4 (38-82)||(29974341-29974386)
chr4 (40-92)||(36871172-36871225)
chr4 (40-73)||(37997259-37997292)
chr4 (40-73)||(39478438-39478471)
chr4 (102-163)||(49449094-49449155)
chr4 (40-92)||(54848152-54848205)
chr4 (31-63)||(4914900-4914932)
chr4 (43-71)||(6309388-6309416)
chr4 (104-164)||(7632391-7632451)
chr4 (66-131)||(24045286-24045351)
chr4 (40-91)||(24310526-24310578)
chr4 (100-164)||(32130169-32130233)
chr4 (66-131)||(37060359-37060424)
chr4 (66-127)||(38792858-38792919)
chr4 (104-156)||(51577696-51577748)
chr4 (100-152)||(52223258-52223310)
chr4 (33-73)||(53781871-53781911)
[»] chr1 (74 HSPs)
chr1 (68-194)||(12657265-12657394)
chr1 (66-191)||(29359680-29359805)
chr1 (104-163)||(649850-649909)
chr1 (104-191)||(3159457-3159544)
chr1 (104-163)||(35369781-35369840)
chr1 (60-163)||(33100843-33100948)
chr1 (104-163)||(3851239-3851298)
chr1 (100-191)||(6693234-6693325)
chr1 (104-163)||(26469440-26469499)
chr1 (104-163)||(27464988-27465047)
chr1 (104-191)||(41677227-41677314)
chr1 (66-157)||(37685372-37685463)
chr1 (66-157)||(37700055-37700146)
chr1 (66-163)||(8350130-8350226)
chr1 (104-163)||(8828052-8828111)
chr1 (104-163)||(23645492-23645551)
chr1 (104-163)||(44914503-44914562)
chr1 (106-163)||(37274964-37275021)
chr1 (100-163)||(19947675-19947738)
chr1 (104-163)||(31088262-31088321)
chr1 (104-163)||(45121412-45121470)
chr1 (108-163)||(50932389-50932444)
chr1 (104-163)||(52576233-52576292)
chr1 (104-157)||(45333792-45333845)
chr1 (104-156)||(4776837-4776889)
chr1 (104-163)||(15082981-15083040)
chr1 (104-163)||(18512274-18512333)
chr1 (104-163)||(37619625-37619684)
chr1 (108-163)||(37985317-37985372)
chr1 (100-163)||(40861193-40861256)
chr1 (40-129)||(51080055-51080146)
chr1 (101-163)||(31827029-31827091)
chr1 (40-157)||(51718563-51718684)
chr1 (104-157)||(15469993-15470046)
chr1 (104-161)||(44519084-44519141)
chr1 (104-161)||(49065297-49065354)
chr1 (66-163)||(9566891-9566990)
chr1 (104-163)||(19055690-19055749)
chr1 (104-163)||(50726179-50726238)
chr1 (108-163)||(51571277-51571332)
chr1 (40-163)||(14983787-14983913)
chr1 (40-82)||(48103403-48103445)
chr1 (40-138)||(36954674-36954771)
chr1 (104-153)||(48261221-48261270)
chr1 (111-163)||(2269503-2269555)
chr1 (116-164)||(21401491-21401539)
chr1 (120-160)||(24981501-24981541)
chr1 (33-73)||(30735328-30735368)
chr1 (102-163)||(2571713-2571776)
chr1 (68-152)||(3558890-3558974)
chr1 (104-163)||(3981957-3982016)
chr1 (104-163)||(10627741-10627800)
chr1 (104-163)||(27533415-27533474)
chr1 (104-163)||(30735224-30735283)
chr1 (100-167)||(37516600-37516667)
chr1 (120-163)||(46907292-46907335)
chr1 (104-163)||(48470720-48470779)
chr1 (104-163)||(50775087-50775146)
chr1 (104-162)||(45640383-45640440)
chr1 (106-164)||(50149029-50149087)
chr1 (40-73)||(2571638-2571671)
chr1 (40-73)||(3159379-3159412)
chr1 (40-92)||(3826819-3826872)
chr1 (31-83)||(4857916-4857969)
chr1 (40-73)||(8350231-8350264)
chr1 (40-73)||(37700151-37700184)
chr1 (40-73)||(50726283-50726316)
chr1 (40-92)||(51571418-51571471)
chr1 (32-91)||(1603000-1603060)
chr1 (104-164)||(9988033-9988093)
chr1 (60-92)||(11068460-11068492)
chr1 (102-150)||(38878844-38878892)
chr1 (40-92)||(48256923-48256974)
chr1 (33-65)||(49647193-49647225)
[»] chr8 (41 HSPs)
chr8 (104-191)||(31249427-31249514)
chr8 (66-163)||(42768247-42768344)
chr8 (104-201)||(10731627-10731724)
chr8 (104-163)||(29025341-29025400)
chr8 (104-163)||(32501127-32501186)
chr8 (104-158)||(27325839-27325893)
chr8 (104-168)||(5277425-5277489)
chr8 (104-160)||(11253476-11253532)
chr8 (104-163)||(12898860-12898919)
chr8 (104-163)||(34186688-34186747)
chr8 (104-161)||(22719521-22719578)
chr8 (64-163)||(43397820-43397921)
chr8 (66-163)||(7271893-7271990)
chr8 (106-158)||(37449361-37449413)
chr8 (104-163)||(4054217-4054276)
chr8 (104-163)||(36251408-36251466)
chr8 (104-163)||(36660381-36660440)
chr8 (40-163)||(5740716-5740842)
chr8 (104-158)||(34639614-34639668)
chr8 (40-131)||(39211056-39211150)
chr8 (100-142)||(43632290-43632332)
chr8 (102-155)||(6511800-6511853)
chr8 (104-165)||(13106561-13106622)
chr8 (40-92)||(13924025-13924078)
chr8 (104-164)||(23754636-23754696)
chr8 (40-82)||(14233658-14233701)
chr8 (108-163)||(37133793-37133848)
chr8 (40-82)||(41776189-41776232)
chr8 (104-157)||(10902786-10902839)
chr8 (38-82)||(11138908-11138953)
chr8 (104-137)||(25987743-25987776)
chr8 (40-73)||(31249559-31249592)
chr8 (40-92)||(37392132-37392185)
chr8 (40-92)||(38939193-38939246)
chr8 (104-137)||(44090968-44091001)
chr8 (40-72)||(4054322-4054354)
chr8 (29-69)||(11253579-11253619)
chr8 (100-163)||(34796461-34796522)
chr8 (102-158)||(36816552-36816608)
chr8 (33-69)||(38578403-38578439)
chr8 (37-92)||(42768126-42768182)
[»] chr7 (47 HSPs)
chr7 (40-163)||(3937054-3937178)
chr7 (104-191)||(38073301-38073388)
chr7 (40-142)||(41989694-41989798)
chr7 (40-162)||(43942652-43942771)
chr7 (104-163)||(44895503-44895562)
chr7 (104-197)||(38861177-38861270)
chr7 (102-167)||(43025419-43025484)
chr7 (104-163)||(22918100-22918159)
chr7 (107-158)||(24614252-24614303)
chr7 (100-163)||(25192848-25192911)
chr7 (104-163)||(38956549-38956608)
chr7 (34-137)||(45420017-45420123)
chr7 (66-163)||(32529787-32529884)
chr7 (104-163)||(40112885-40112944)
chr7 (104-163)||(41189474-41189533)
chr7 (104-163)||(48062138-48062197)
chr7 (106-163)||(40417857-40417914)
chr7 (108-164)||(35072292-35072348)
chr7 (110-161)||(35627953-35628004)
chr7 (104-147)||(44189257-44189300)
chr7 (106-163)||(45851138-45851192)
chr7 (120-163)||(46022198-46022241)
chr7 (104-163)||(46578066-46578125)
chr7 (40-82)||(26749020-26749062)
chr7 (33-66)||(33057375-33057408)
chr7 (102-163)||(35207580-35207641)
chr7 (35-82)||(27570353-27570401)
chr7 (104-164)||(31445399-31445459)
chr7 (108-164)||(35098633-35098689)
chr7 (120-163)||(7701641-7701684)
chr7 (100-163)||(44649259-44649322)
chr7 (34-92)||(47078254-47078313)
chr7 (36-66)||(24614358-24614388)
chr7 (40-73)||(25192919-25192952)
chr7 (100-157)||(30064516-30064573)
chr7 (40-73)||(30941389-30941422)
chr7 (32-65)||(34304721-34304754)
chr7 (40-92)||(38547294-38547347)
chr7 (40-69)||(40112993-40113022)
chr7 (40-73)||(44895607-44895640)
chr7 (102-163)||(47391256-47391317)
chr7 (40-77)||(47391345-47391382)
chr7 (108-156)||(17002422-17002470)
chr7 (104-152)||(17945149-17945197)
chr7 (102-134)||(22605437-22605469)
chr7 (100-164)||(33578246-33578310)
chr7 (104-152)||(36703813-36703861)
[»] chr6 (38 HSPs)
chr6 (104-191)||(5080470-5080557)
chr6 (104-191)||(8098500-8098587)
chr6 (40-163)||(15974624-15974748)
chr6 (104-163)||(552874-552933)
chr6 (104-164)||(26595430-26595490)
chr6 (104-163)||(32316859-32316918)
chr6 (106-163)||(13689925-13689982)
chr6 (40-163)||(18737498-18737623)
chr6 (106-163)||(31077877-31077934)
chr6 (114-163)||(33430293-33430342)
chr6 (104-163)||(14818013-14818072)
chr6 (66-164)||(5522569-5522667)
chr6 (102-163)||(5694082-5694143)
chr6 (104-163)||(1156801-1156860)
chr6 (102-163)||(277070-277131)
chr6 (102-163)||(4820446-4820507)
chr6 (120-163)||(16199547-16199590)
chr6 (104-163)||(17551310-17551368)
chr6 (104-163)||(22079494-22079553)
chr6 (104-163)||(34047468-34047527)
chr6 (35-73)||(32316963-32317001)
chr6 (106-163)||(2241956-2242013)
chr6 (40-92)||(32644626-32644679)
chr6 (40-128)||(2060601-2060690)
chr6 (104-152)||(20998087-20998135)
chr6 (110-158)||(33603216-33603264)
chr6 (104-163)||(3853238-3853297)
chr6 (104-163)||(31883234-31883293)
chr6 (40-73)||(1156724-1156757)
chr6 (108-149)||(5739708-5739749)
chr6 (40-73)||(8098630-8098663)
chr6 (40-92)||(9395341-9395394)
chr6 (104-137)||(14910258-14910291)
chr6 (40-73)||(22079598-22079631)
chr6 (104-157)||(24900855-24900908)
chr6 (40-73)||(25811873-25811906)
chr6 (32-65)||(30457429-30457462)
chr6 (40-73)||(34047390-34047423)
[»] chr5 (51 HSPs)
chr5 (68-191)||(35646426-35646551)
chr5 (40-161)||(14923086-14923211)
chr5 (102-163)||(33037599-33037660)
chr5 (66-163)||(26791175-26791274)
chr5 (104-163)||(36739029-36739088)
chr5 (107-163)||(28467384-28467440)
chr5 (104-163)||(7287120-7287179)
chr5 (104-163)||(41321336-41321395)
chr5 (102-163)||(18258724-18258785)
chr5 (66-191)||(1079855-1079982)
chr5 (104-163)||(1764305-1764364)
chr5 (104-163)||(7076499-7076558)
chr5 (104-163)||(14051246-14051305)
chr5 (104-163)||(28306063-28306122)
chr5 (104-162)||(1274439-1274497)
chr5 (108-163)||(1671627-1671682)
chr5 (104-163)||(5168264-5168323)
chr5 (104-147)||(19521950-19521993)
chr5 (68-163)||(19844241-19844336)
chr5 (102-163)||(13168601-13168662)
chr5 (32-92)||(43153064-43153125)
chr5 (100-152)||(6596408-6596460)
chr5 (104-163)||(2972405-2972464)
chr5 (110-165)||(8686978-8687033)
chr5 (120-163)||(17626083-17626126)
chr5 (104-163)||(18660840-18660899)
chr5 (35-73)||(19522038-19522076)
chr5 (40-92)||(8442173-8442226)
chr5 (40-92)||(12203161-12203214)
chr5 (102-158)||(42175000-42175054)
chr5 (66-163)||(7552898-7552995)
chr5 (104-155)||(8097333-8097384)
chr5 (40-91)||(16972104-16972155)
chr5 (66-143)||(22649612-22649691)
chr5 (104-163)||(33958190-33958249)
chr5 (104-163)||(39591761-39591820)
chr5 (104-163)||(39592153-39592212)
chr5 (35-65)||(13309880-13309910)
chr5 (37-82)||(21210830-21210876)
chr5 (40-69)||(5721856-5721885)
chr5 (40-73)||(7076428-7076461)
chr5 (104-137)||(13089738-13089771)
chr5 (40-92)||(14206403-14206456)
chr5 (102-163)||(25560949-25561009)
chr5 (40-73)||(28306167-28306200)
chr5 (66-127)||(26686923-26686984)
chr5 (66-127)||(26956654-26956715)
chr5 (43-71)||(35233351-35233379)
chr5 (45-92)||(35649991-35650039)
chr5 (119-155)||(39807652-39807688)
chr5 (34-73)||(42446325-42446365)
[»] scaffold0067 (2 HSPs)
scaffold0067 (104-191)||(35604-35691)
scaffold0067 (40-73)||(35526-35559)
[»] scaffold0199 (1 HSPs)
scaffold0199 (104-163)||(8749-8808)
[»] scaffold0056 (1 HSPs)
scaffold0056 (104-163)||(76550-76609)
[»] scaffold0098 (1 HSPs)
scaffold0098 (66-161)||(49336-49433)
[»] scaffold0519 (1 HSPs)
scaffold0519 (104-160)||(11863-11919)
[»] scaffold0041 (1 HSPs)
scaffold0041 (104-190)||(10867-10953)
[»] scaffold0087 (1 HSPs)
scaffold0087 (104-163)||(53292-53351)
[»] scaffold0618 (1 HSPs)
scaffold0618 (104-137)||(8909-8942)
[»] scaffold0054 (1 HSPs)
scaffold0054 (40-92)||(31604-31657)


Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 10 - 455
Target Start/End: Complemental strand, 50318469 - 50318032
Alignment:
Q  10 gacatcatcacgtgttaaaatattttagaaaaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnacttt--ctc 107  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  || |||||       |||||  |||    
T  50318469 gacatcatggcgtgttaaaatattttagaaaaatgacatttgaacaactattttttataactttctctctcatactcgcattatctttttactttttctc 50318370  T
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaatattttacacc 207  Q
    |||||| ||||      |||| ||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50318369 tctattacttt------tgtgccactatctcatttcctttgtaaaattttggttgtcacatgtatggatgttcaagtaacacaagtcaatattttacacc 50318276  T
Q  208 gttacgttaatgtatgcaaattgatttctttaggactttaacttcaacaaccttgtggtggttgttgagacacttgagacaacaacttatttctctcttg 307  Q
    ||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  50318275 gtta-----atgtatgcaaattgatttctttaggactttaacttcaacaaccttgtggtggttgttgaggcacctcagacaacaacttatttctctcttg 50318181  T
Q  308 agggaggatgatgcatatgtaaacgtttcgacgatcaagtaagaatgtgttgaacaacttatttctctcttgtgcta-gtctttgatctataataaatgg 406  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  50318180 agggaggatgatgcatatgtaaacgtttcaacgatcaagtaagaatgtgttgaacaacttatttctctcttgtgctaggtctttgatctataatgaatgg 50318081  T
Q  407 tcgagatttgcttatgttactgatagaattgataggtttagccattttc 455  Q
    || |||||||||||||||||||||||||||| |||||||||||||||||    
T  50318080 tcaagatttgcttatgttactgatagaattggtaggtttagccattttc 50318032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 41505572 - 41505664
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  41505572 tctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactcaa 41505664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 32205610 - 32205763
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctc--tctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||  || |||||||||||| ||||||||   |||||||       | ||||||  |||||||||||||||||||  ||||||| |    
T  32205610 aaatgatatttgaacaatcatgttttacaactttatctctcatacccacattatctttttattttctctctctattgctttggtttttgcatcactactt 32205709  T
Q  138 catttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  32205710 cattttctttataaaattttagttgttacatctatggatgttcaaataacacaa 32205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 42357074 - 42357015
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42357074 tctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 42357015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 19149005 - 19149130
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctct--attgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||  |||||||| |||||||||||||||  ||||||||       |||||||||||  |||| ||||||||||||| ||||| ||    
T  19149005 aaatgatatttgaacaatcattttttataactttctctctcatactcacattatctttttactttctctctttattgttttggtttttgtgccactaact 19149104  T
Q  138 catttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||| ||||    
T  19149105 catttcctttgtaaaattttgattgt 19149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 5244310 - 5244369
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  5244310 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 5244369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 27541492 - 27541433
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  27541492 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 27541433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 38926709 - 38926768
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38926709 tctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgt 38926768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 52254128 - 52254069
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  52254128 tctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 52254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 52939732 - 52939791
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  52939732 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 52939791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 32924265 - 32924212
Alignment:
Q  110 tattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 32924212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 36671006 - 36670945
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  36671006 tttctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgt 36670945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 288807 - 288870
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||    
T  288807 tctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttaca 288870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 20547980 - 20547921
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  20547980 tctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgt 20547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 35597243 - 35597302
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35597243 tctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgt 35597302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 44413950 - 44413848
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtta 165  Q
    |||||||||||||||||  ||||||||       || ||||||||||||||||||||||||||||| || ||||||| |||| |||||||||| |||| |    
T  44413950 acaactttctctctcatactcacattatctttttaccttctctctattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtca 44413851  T
Q  166 cat 168  Q
    |||    
T  44413850 cat 44413848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 45000144 - 45000200
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggt 160  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  45000144 tctctctattgatttggtttttgtgccactacctcatttcctttgtaaaattttggt 45000200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 5114159 - 5114218
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||    
T  5114159 tctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgt 5114218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 13348124 - 13348065
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||    
T  13348124 tctctctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgt 13348065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 33939319 - 33939378
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  33939319 tctctctattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgt 33939378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 37302587 - 37302686
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||| |||||||||       ||||  |||||||||| |||||||||||||| ||||||||||||||||||  ||||||||| ||||    
T  37302587 acaactttctctctcatattcacattacctttttactttctctctctattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgt 37302686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 41309198 - 41309257
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||    
T  41309198 tctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgt 41309257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 44856034 - 44856093
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  44856034 tctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgt 44856093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 46623948 - 46624047
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctct--ctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||| || |||||||||       |||||||||  |||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  46623948 acaactttctctctgatattcacattatctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgt 46624047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 26014893 - 26014952
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| |  ||||||||||||||| |||||||||||||||    
T  26014893 tctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgt 26014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 42358628 - 42358569
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| ||||    
T  42358628 tctctctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgt 42358569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 45711429 - 45711366
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    ||||||||||| ||||||| |||||||| ||| |||||| |||| |||||||||||||||||||    
T  45711429 tctctctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttaca 45711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 47472410 - 47472469
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| ||| ||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  47472410 tctctctgttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgt 47472469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 51982180 - 51982239
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| |||||||||||| ||||| |||| |||||||||||||| |||||    
T  51982180 tctctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgt 51982239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 33791759 - 33791673
Alignment:
Q  105 ctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    |||||||||| ||||  |||||||||| |||||||||| |||| | ||||||||||||| | ||  |||||||||||| ||||||||    
T  33791759 ctctctattgttttgacttttgtgtcaatacctcattttctttgtgaaattttggttgtcatataaatggatgttcaaataacacaa 33791673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 35299866 - 35299816
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  35299866 tttctctctattgctttgatttttgtgtcaatacctcattttctttataaa 35299816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 44813217 - 44813271
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||    
T  44813217 tctctctattgcttgggtttttgtgccactacctaatttcctttgtaaaattttg 44813271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 16969602 - 16969497
Alignment:
Q  60 ttttttacaactttctctctcatgttcacattannnnnnnactttctct--ctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||| |||||||||||||||||  ||||||||       |||||||||  |||||| |||| ||||| || |||||||||||||||||| |||||||||    
T  16969602 tttttgacaactttctctctcatactcacattatctttttactttctctttctattgttttgatttttatgccactacctcatttcctttgtaaaatttt 16969503  T
Q  158 ggttgt 163  Q
     |||||    
T  16969502 agttgt 16969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 55151707 - 55151654
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  55151707 tctctctagtgctttggtttttgtgtcaatacttcatttcctttgtaaaatttt 55151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 35377139 - 35377012
Alignment:
Q  40 aaatgatatttgaacaactatttttt--acaactttctctctcatgttcacattannnnnnnactttct--ctctattgctttggtttttgtgtcactac 135  Q
    |||||||||||||||||| | ||||   ||||||||||||||||   ||||||||       |||||||  ||||||||||||| |||||||| || |||    
T  35377139 aaatgatatttgaacaacaacttttgtgacaactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatac 35377040  T
Q  136 ctcatttcctttataaaattttggttgt 163  Q
     |||||| |||| |||||||||||||||    
T  35377039 atcattttctttgtaaaattttggttgt 35377012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 52326060 - 52326159
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcac-tacctcatttcctttataaaattttggttg 162  Q
    |||||||||||||||||| ||||||||       ||||  ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| |||    
T  52326060 acaactttctctctcatgctcacattatctttttactttctctctctattgttttggtttttgtg-cacttacctcatttcctttgtaaaattttgattg 52326158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 21217609 - 21217652
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  21217609 gtttttgtgtcaatacctcattttctttataaaattttggttgt 21217652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 23592555 - 23592598
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  23592555 gtttttgtgtcaatacctcattttctttataaaattttggttgt 23592598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 24256827 - 24256708
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctct--attgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||  |||||| |||| ||||||| ||||  ||| ||||       |||||||||||  |||| |||| ||||||| ||| |||||    
T  24256827 aaatgatatttgaacaatcatttttgacaaatttctctatcatactcagattaccttcttactttctctctttattgttttgatttttgtatcaatacct 24256728  T
Q  138 catttcctttataaaatttt 157  Q
    |||||||||| |||||||||    
T  24256727 catttcctttgtaaaatttt 24256708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 28700475 - 28700566
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtg 128  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||  ||||||||       ||||  |||||||||||||||||||||||||    
T  28700475 aaatgatatttgaacaaccattttttgacaactttatctctcatactcacattatgtttttactttctctctctattgctttggtttttgtg 28700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 37057047 - 37056988
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||| |||||| ||||||||    
T  37057047 tctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgt 37056988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 37503733 - 37503678
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||||||||||| || ||||||||||||  ||||||||||||||    
T  37503733 tctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgt 37503678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 55361290 - 55361175
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactttctctct--attgctttggtttttgtgtcactacc 136  Q
    |||||||||||| ||||| |||| || |||||||||||||| ||  ||||||||       |||||||||||  ||||||||||||||||||||| |||     
T  55361290 aaatgatatttgtacaaccatttcttgacaactttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtcaatact 55361191  T
Q  137 tcatttcctttataaa 152  Q
    |||||| |||| ||||    
T  55361190 tcattttctttgtaaa 55361175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 38957576 - 38957526
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttttacaactttctctctcat 82  Q
    ||||||| |||||||||||| |||||||||||| |||||||| ||||||||    
T  38957576 ttttagagaaatgatatttgtacaactatttttgacaactttttctctcat 38957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 42889065 - 42889123
Alignment:
Q  103 ttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||| ||||||||||||||||| || || ||||||| |||| |||||||||||||    
T  42889065 ttctctctgttgctttggtttttgtgccaataactcattttctttgtaaaattttggtt 42889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 35368625 - 35368678
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  35368625 aaatgatatttgtacaactatttttgtacaactttctctctcatactcacatta 35368678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 44413385 - 44413332
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||| |||||||| |||||||||| || ||||||||||||||| |||||||||    
T  44413385 tctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaatttt 44413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 49087090 - 49087037
Alignment:
Q  111 attgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||| |||||||||||||||| |||||||||| ||||  |||||||||||||||    
T  49087090 attgttttggtttttgtgtcaatacctcattttctttgaaaaattttggttgtt 49087037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 13348210 - 13348178
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttttta 66  Q
    |||||||||||||||||||||||||||||||||    
T  13348210 ttagaaaaatgatatttgaacaactatttttta 13348178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 11056987 - 11056928
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttttt-acaactttctctctcatgttcacat 90  Q
    ||||||| |||||||||||| ||||| ||||||| |||||||||||| |||| |||||||    
T  11056987 ttttagagaaatgatatttgtacaacaattttttgacaactttctctttcatattcacat 11056928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 27541576 - 27541537
Alignment:
Q  34 ttagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  27541576 ttagagaaatgatatttgaacaaccattttttacaacttt 27541537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 44383287 - 44383329
Alignment:
Q  121 tttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||    
T  44383287 tttttgtgtcaatacctcattttctttataaaattttgattgt 44383329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 52939651 - 52939689
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  52939651 tagagaaatgatatttgaacaaccattttttacaacttt 52939689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 7934062 - 7934114
Alignment:
Q  110 tattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||| ||||| |||||| ||||||||| |||||    
T  7934062 tattgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgt 7934114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 11630744 - 11630687
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||| ||||||||||| | ||| ||| |||||| |||| |||||||||    
T  11630744 actttctctctattactttggtttttatatcaatacttcattttctttgtaaaatttt 11630687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 13735212 - 13735241
Alignment:
Q  106 tctctattgctttggtttttgtgtcactac 135  Q
    ||||||||||||||||||||||||||||||    
T  13735212 tctctattgctttggtttttgtgtcactac 13735241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 29057662 - 29057715
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||  ||||||||    
T  29057662 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacatta 29057715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 29846948 - 29846895
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||  ||||||||    
T  29846948 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacatta 29846895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 36671090 - 36671053
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttttacaa 69  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  36671090 ttttagagaaatgatatttgaacaaccattttttacaa 36671053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 42357148 - 42357115
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  42357148 aaatgatatttgaacaaccattttttacaacttt 42357115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 44813129 - 44813166
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttttacaa 69  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  44813129 ttttagagaaatgatatttaaacaactattttttacaa 44813166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 45711507 - 45711474
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  45711507 aaatgatatttgaacaacaattttttacaacttt 45711474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 47472332 - 47472365
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  47472332 aaatgatatttgaacaaccattttttacaacttt 47472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 8847189 - 8847245
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    ||||| ||||||| ||||||||||||| || ||||||||||  ||| ||||||||||    
T  8847189 tttctttctattgttttggtttttgtgccaatacctcattttatttgtaaaattttg 8847245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 16129526 - 16129558
Alignment:
Q  41 aatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||||||||| |||||||||||||||    
T  16129526 aatgatatttgaacaaccattttttacaacttt 16129558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 20275762 - 20275730
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttttta 66  Q
    ||||| |||||||||||||||||||||||||||    
T  20275762 ttagagaaatgatatttgaacaactatttttta 20275730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21005240 - 21005192
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttt-ttacaactttctctct 79  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||||    
T  21005240 ttttagagaaatgatatttgaacatctattttgtgacaactttctctct 21005192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 32145975 - 32145923
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    ||||||||||| |||| ||||||||||||||||| | || |||| ||||||||    
T  32145975 tctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaattt 32145923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 43333565 - 43333593
Alignment:
Q  43 tgatatttgaacaactattttttacaact 71  Q
    |||||||||||||||||||||||||||||    
T  43333565 tgatatttgaacaactattttttacaact 43333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 53871089 - 53871037
Alignment:
Q  40 aaatgatatttgaacaactatttt-ttacaactttctctctcatgttcacatt 91  Q
    |||||||||||||||||| ||||| | |||| |||||||||||| ||||||||    
T  53871089 aaatgatatttgaacaaccattttatgacaattttctctctcatattcacatt 53871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 9647142 - 9647272
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctc--tctattgctttggtttttgtgtcac 132  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||       ||||||||  |||||||||||||||||||||||||    
T  9647142 tagagaaatgatatttgaacaactattttttacaactttctctctcatactcatattatctttttactttctctctctattgctttggtttttgtgtcac 9647241  T
Q  133 tacctcatttcctttataaaattttggttgt 163  Q
    ||| ||||||||||| |||||||||||||||    
T  9647242 tacttcatttcctttgtaaaattttggttgt 9647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 43487420 - 43487523
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttct--ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| ||||||||       |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43487420 acaactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 43487519  T
Q  164 taca 167  Q
    ||||    
T  43487520 taca 43487523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 22416294 - 22416381
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||| |||| ||||||||||||| ||||||||    
T  22416294 tctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 22416381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 6511336 - 6511396
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacat 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  6511336 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcacat 6511396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 9207671 - 9207730
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  9207671 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 9207730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 19633286 - 19633422
Alignment:
Q  33 tttagaaaaatgatatttgaacaactattttttacaactttctctctc----atgttcacattannnnnnnactttct--ctctattgctttggtttttg 126  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||    || || | ||||       |||||||  |||| |||||||||||||||    
T  19633286 tttagatatatgatatttgaacaactattttttacaactttctctctctttcatatttatattatctgtttactttctttctctgttgctttggtttttg 19633385  T
Q  127 tgtcactacctcatttcctttataaaattttggttgt 163  Q
    | ||||||||||||||||||| |||||||||| ||||    
T  19633386 tatcactacctcatttcctttgtaaaattttgattgt 19633422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 19830187 - 19830323
Alignment:
Q  33 tttagaaaaatgatatttgaacaactattttttacaactttctctctc----atgttcacattannnnnnnactttct--ctctattgctttggtttttg 126  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||    || || | ||||       |||||||  |||| |||||||||||||||    
T  19830187 tttagatatatgatatttgaacaactattttttacaactttctctctctttcatatttatattatctgtttactttctttctctgttgctttggtttttg 19830286  T
Q  127 tgtcactacctcatttcctttataaaattttggttgt 163  Q
    | ||||||||||||||||||| |||||||||| ||||    
T  19830287 tatcactacctcatttcctttgtaaaattttgattgt 19830323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 42091493 - 42091435
Alignment:
Q  105 ctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  42091493 ctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgt 42091435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 10060489 - 10060339
Alignment:
Q  41 aatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcat 140  Q
    ||||||||||||||||| |||||| |||||||| ||||||||  ||| ||||       ||| ||||||| ||||||| |||||| |  || || |||||    
T  10060489 aatgatatttgaacaaccatttttaacaactttatctctcatactcatattatctttttactctctctctgttgctttagtttttatagcaatatctcat 10060390  T
Q  141 ttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||||| ||||| |||| |||| |||||||| ||| ||||    
T  10060389 ttcctttataaaattttagttgtcacatatatgaatgttcaaataatacaa 10060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 17388580 - 17388501
Alignment:
Q  117 ttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaa 196  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||| |||| ||| ||||||||| |||||||| ||||    
T  17388580 ttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcacatatatagatgttcaaataacacaactcaa 17388501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 18254239 - 18254140
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||  ||||||||       ||||  ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  18254239 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgt 18254140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 41042335 - 41042394
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  41042335 tctctctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgt 41042394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 41195665 - 41195724
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  41195665 tctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgt 41195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 1248767 - 1248820
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  1248767 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaatttt 1248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 6049339 - 6049276
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||| ||||    
T  6049339 actttctctctcttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgt 6049276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 34945080 - 34945021
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||    
T  34945080 tctctctattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgt 34945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 42421888 - 42421829
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  42421888 tctctttattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgt 42421829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 44287432 - 44287345
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||| |||| ||| ||| || || ||||||||    
T  44287432 tctctctattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcacatatatagatattgaaataacacaa 44287345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 2076654 - 2076709
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||    
T  2076654 tctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 2076709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 9194322 - 9194381
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| || ||||||||||| ||| |||||||||||||||    
T  9194322 tctctctattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgt 9194381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 22888807 - 22888748
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| ||||    
T  22888807 tctctttattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgt 22888748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 37737961 - 37737902
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| || |||||||||||| |||| ||||||||||    
T  37737961 tctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgt 37737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 9990772 - 9990825
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| |||||||||    
T  9990772 tctctctattgctttggtttttgtaccactacttcatttcctttgtaaaatttt 9990825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 9760046 - 9760158
Alignment:
Q  53 acaactattttttacaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttata 150  Q
    |||||| ||| | |||||||||||||||||  ||||||||       ||||  ||||||||||||||| | ||||||| |||||||||||||||||   |    
T  9760046 acaactttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttagattttgtgccactacctcatttccttggaa 9760145  T
Q  151 aaattttggttgt 163  Q
    |||||||||||||    
T  9760146 aaattttggttgt 9760158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 7664056 - 7663997
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| |||| || |||||||    
T  7664056 tctctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgt 7663997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 25270556 - 25270513
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  25270556 gtttttgtgtcaatacctcattttctttataaaattttggttgt 25270513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 41056721 - 41056678
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  41056721 gtttttgtgtcaatacctcattttctttataaaattttggttgt 41056678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 44977489 - 44977430
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| |||| ||||| |||| |||| || |||||||    
T  44977489 tctctctattgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgt 44977430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 3838870 - 3838817
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||||||||| |||| ||||||||||||| | ||||||||||| |||||||||    
T  3838870 tctctctattgttttgatttttgtgtcactgcttcatttcctttgtaaaatttt 3838817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 7698256 - 7698305
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||| |||||||| |||||||| ||||||||| |||||||||    
T  7698256 tctattgctttgatttttgtgccactacctaatttcctttgtaaaatttt 7698305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 44287508 - 44287475
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||||||||||||||||||||||||||    
T  44287508 aaatgatatttgaacaactattttttacaacttt 44287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 45202189 - 45202136
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||    
T  45202189 aaatgatatttgtacaaccatttttttacaactttctctctcatattcacatta 45202136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 21611654 - 21611586
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctc-----atttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||| |||||||| |||||||||     ||||| ||| |||||||||||||||    
T  21611654 actttctctctattgctttgatttttgtgccactacctcaccttatttcatttgtaaaattttggttgt 21611586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 23690495 - 23690439
Alignment:
Q  107 ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| |||||||||||||||| |||||| |||||||| ||||| | |||||||    
T  23690495 ctctattgttttggtttttgtgtcaatacctcttttcctttgtaaaaatatggttgt 23690439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 33273561 - 33273517
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||| || ||||||| |||||||||||||||||||||    
T  33273561 gtttttgtgtcaatatctcattttctttataaaattttggttgtt 33273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 37738033 - 37737981
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacatta 92  Q
    |||||||||||||||||| |||||  |||||||||||||||||  ||||||||    
T  37738033 aaatgatatttgaacaaccattttcgacaactttctctctcatactcacatta 37737981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 13333144 - 13333101
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||    
T  13333144 gtttttgtgtcaatacatcattttctttataaaattttggttgt 13333101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 19109083 - 19109040
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttccttt 147  Q
    |||||||||||||||| |||||||| |||||| |||||||||||    
T  19109083 tctctctattgctttgatttttgtgccactacttcatttccttt 19109040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 27490720 - 27490661
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||| | ||| |||||| |||| |||||||||| ||||    
T  27490720 tctctctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgt 27490661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 27696014 - 27695975
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctct 79  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  27696014 aaatgatatttgaacaaccatttttgacaactttctctct 27695975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 32477413 - 32477472
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| |||||||||| ||||||| | | ||||||||||||||| | |||||||||||||    
T  32477413 tctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgt 32477472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 32944495 - 32944460
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||| |||||||||||||||||    
T  32944495 tttctctctattgctttgatttttgtgtcactacct 32944460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 1352472 - 1352530
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    ||||||||||||||||||||||| || |  ||||||| |||| ||||||||| ||||||    
T  1352472 tctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttagttgtt 1352530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 15141467 - 15141529
Alignment:
Q  31 attttagaaaaatgatatttgaacaactatttt-ttacaactttctctctcatgttcacatta 92  Q
    |||||||| |||||||||||| ||| ||||||| | |||||||||||||||||  ||||||||    
T  15141467 attttagagaaatgatatttgtacatctattttatgacaactttctctctcatactcacatta 15141529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 18254282 - 18254244
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  18254282 tagagaaatgatatttgaacaaccattttttacaacttt 18254244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 37077787 - 37077817
Alignment:
Q  35 tagaaaaatgatatttgaacaactatttttt 65  Q
    |||||||||||||||||||||||||||||||    
T  37077787 tagaaaaatgatatttgaacaactatttttt 37077817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 3838948 - 3838915
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||||||||| ||||||||||||||||    
T  3838948 aaatgatatttgaacaattattttttacaacttt 3838915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 9760020 - 9760053
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  9760020 aaatgatatttgaacaaccattttttacaacttt 9760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 9990694 - 9990727
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||||| |||||||||||||    
T  9990694 aaatgatatttgaacaactaatttttacaacttt 9990727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10550522 - 10550473
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttttt-acaactttctctctcat 82  Q
    ||||| ||||||||| || ||||||||||||| |||||||||||||||||    
T  10550522 ttagagaaatgatatatgtacaactattttttcacaactttctctctcat 10550473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 11828877 - 11828828
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcac 88  Q
    |||||||||||| ||||| |||||| |||||||||||||||||| |||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 19109161 - 19109132
Alignment:
Q  40 aaatgatatttgaacaactattttttacaa 69  Q
    ||||||||||||||||||||||||||||||    
T  19109161 aaatgatatttgaacaactattttttacaa 19109132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 22446012 - 22445971
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttccttt 147  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  22446012 tctctattgctttaatttttgtgtcaatacctcatttccttt 22445971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 31578516 - 31578549
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  31578516 tctctctattgctttgatttttgtgtcactacct 31578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 36587504 - 36587430
Alignment:
Q  60 ttttttacaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcacta 134  Q
    ||||| |||||||||||||||||  ||||||||       ||| |||||||||||||||| |||||||| |||||    
T  36587504 tttttgacaactttctctctcatactcacattatcattttactctctctctattgctttgatttttgtgccacta 36587430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 44996625 - 44996654
Alignment:
Q  102 tttctctctattgctttggtttttgtgtca 131  Q
    ||||||||||||||||||||||||||||||    
T  44996625 tttctctctattgctttggtttttgtgtca 44996654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 7502389 - 7502341
Alignment:
Q  115 ctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||||||||| |||||| ||| |||||||||||| |||||||    
T  7502389 ctttgatttttgtgtcaatacctctttttctttataaaattatggttgt 7502341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 8427634 - 8427694
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    ||||||||||  ||||||||| |||||| || || |||||||||||||| || ||||||||    
T  8427634 tctctctattattttggttttcgtgtcaataactaatttcctttataaatttatggttgtt 8427694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 33583216 - 33583164
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    ||||||||||||||| |||| ||||| ||||| |||||||||| |||| ||||    
T  33583216 actttctctctattgttttgttttttttgtcaatacctcattttctttgtaaa 33583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 36180679 - 36180651
Alignment:
Q  43 tgatatttgaacaactattttttacaact 71  Q
    |||||||||||||||||||||||||||||    
T  36180679 tgatatttgaacaactattttttacaact 36180651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 36193796 - 36193760
Alignment:
Q  36 agaaaaatgatatttgaacaactattttttacaactt 72  Q
    |||||||||||||||||||||| |||||| |||||||    
T  36193796 agaaaaatgatatttgaacaaccatttttaacaactt 36193760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 39744630 - 39744598
Alignment:
Q  60 ttttttacaactttctctctcatgttcacatta 92  Q
    ||||||||||||||||||||||| |||||||||    
T  39744630 ttttttacaactttctctctcatattcacatta 39744598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 43075960 - 43076024
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctc-atttcctttataaaattttggttgt 163  Q
    |||||||||||| || |||| ||||||||||| ||| || ||||  |||||||||||||||||||    
T  43075960 actttctctctactgttttgatttttgtgtcaatacttcaattttttttataaaattttggttgt 43076024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 29531598 - 29531509
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||    
T  29531598 tttctttctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacatgtatggatgttcaaataatacaa 29531509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 2268499 - 2268410
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||| ||||||| |||||||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||    
T  2268499 tttctttctattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 2268410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 46634185 - 46634273
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaa 196  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||| |||||||| ||||    
T  46634185 tctattactttgatttttgtgtcactacctcatttcctttgtaaaattttagttgtcacatatatggatgttcaaataacacaactcaa 46634273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 44539813 - 44539874
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  44539813 tttctctctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgt 44539874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 26724963 - 26724899
Alignment:
Q  103 ttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26724963 ttctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttaca 26724899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 24575841 - 24575782
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  24575841 tctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgt 24575782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 53801753 - 53801690
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  53801753 actttctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgt 53801690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 46213049 - 46213114
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  46213049 tttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttaca 46213114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 23369322 - 23369263
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  23369322 tctctctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgt 23369263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 37297130 - 37297188
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  37297130 tctctctattgctttggtttttgtgtcactacctcatttcc-ttgtaaaattttggttgt 37297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 39440565 - 39440624
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  39440565 tctctctattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgt 39440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 42853658 - 42853717
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  42853658 tctctctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgt 42853717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 51986083 - 51986182
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctct--ctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||  ||||||||       |||||||||  ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  51986083 acaactttctctctcatactcacattatctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 51986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 11068769 - 11068827
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttg 162  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  11068769 tctctctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttg 11068827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 43175065 - 43175119
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  43175065 tctctctatggctttggtttttgtgtcactacctcatttcctttgtaaaattttg 43175119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 31641553 - 31641496
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  31641553 tctccattgctttgatttttgtgtcactaccttatttcctttataaaattttggttgt 31641496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 36177989 - 36178046
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  36177989 tctctattgctttggtttttgtaccactacctcatttcctttataaaattttagttgt 36178046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 50608680 - 50608555
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacct 137  Q
    |||| |||||||||||| ||||||| |||||||||||| ||||  ||||||||       ||||  |||||||||| ||||| ||||||||||| || ||    
T  50608680 aaattatatttgaacaattatttttgacaactttctctttcatactcacattatttttttacttcctctctctattactttgatttttgtgtcaatatct 50608581  T
Q  138 catttcctttataaaattttggttgt 163  Q
    |||||||||| ||||||||| |||||    
T  50608580 catttcctttgtaaaattttagttgt 50608555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 26492087 - 26492147
Alignment:
Q  103 ttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||    
T  26492087 ttctctctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgt 26492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 29175268 - 29175365
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| ||||||||  ||||||||       ||||||||||| |||||||||||||||||||| || ||||||| |||| |||||||||||||||    
T  29175268 acaactttttctctcatactcacattatctttttactttctctctcttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgt 29175365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 5622537 - 5622592
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  5622537 tttctctctattgctttggtttttgtgcaactacctcatttcctttgtaaaatttt 5622592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 10250545 - 10250446
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||  ||||||||       ||||  ||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||    
T  10250545 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgt 10250446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 26732306 - 26732365
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  26732306 tctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgt 26732365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 37997335 - 37997394
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||    
T  37997335 tctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 37997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 38134436 - 38134491
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  38134436 tctctattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggtt 38134491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 40348875 - 40348934
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  40348875 tctctctattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgt 40348934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 7161589 - 7161529
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttttacaactttctctctcatgttcacatta 92  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||||| |||||||||    
T  7161589 ttttagaaaaatgatatttgtacaatatttttttacaactttctctctcatattcacatta 7161529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 42360265 - 42360329
Alignment:
Q  132 ctacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaa 196  Q
    |||||||||||||||| ||||||||||||||| |||| |||| |||||||| |||||||| ||||    
T  42360265 ctacctcatttcctttgtaaaattttggttgtcacatatatgaatgttcaaataacacaactcaa 42360329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 27965073 - 27965125
Alignment:
Q  109 ctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  27965073 ctattgctttggtttttgtgtcactacctcatttccat--taaaattttggttgt 27965125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 56474757 - 56474698
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  56474757 tctctctattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgt 56474698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 39478515 - 39478577
Alignment:
Q  101 ctttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| |||| ||||| ||||||||||| |||||||||| |||| |||||||||||||||    
T  39478515 ctttctctatattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 39478577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 5386387 - 5386484
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcacta 134  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  ||||||||       ||||  |||||||||||||||| ||||||||| ||||    
T  5386387 aaatgatatttgaacaaccattttttgacaactttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgttacta 5386484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 15175631 - 15175686
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||  | ||||||||||||||| |||||||||||||||    
T  15175631 tctattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgt 15175686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 27051076 - 27051017
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||| |||||||||||||||| || ||||||| |||| |||||||||||||||    
T  27051076 tctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgt 27051017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 38382418 - 38382461
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  38382418 gtttttgtgtcaatacctcattttctttataaaattttggttgt 38382461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 39654905 - 39654964
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| |||||||||| |||| |||| || |||||||    
T  39654905 tctctctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgt 39654964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 47181938 - 47181981
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  47181938 gtttttgtgtcaatacctcattttctttataaaattttggttgt 47181981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 48402171 - 48402128
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  48402171 gtttttgtgtcaatacctcattttctttataaaattttggttgt 48402128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 19474020 - 19473887
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnacttt--ctctctattgctttggtttttgtg 128  Q
    ||||||| |||||||||||||||||| ||||||| |||||||  ||| ||||  ||||||||       |||||  ||||||| || |||||||||||||    
T  19474020 ttttagagaaatgatatttgaacaaccattttttgacaactta-tctatcatactcacattatgttttaactttttctctctaatgttttggtttttgtg 19473922  T
Q  129 tcactacctcatttcctttataaaattttggttgt 163  Q
    ||| ||| |||||| |||| |||||||||| ||||    
T  19473921 tcaatacttcattttctttgtaaaattttgattgt 19473887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 36177900 - 36177942
Alignment:
Q  31 attttagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  36177900 attttagagaaatgatatttgaacaaccattttttacaacttt 36177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 10250583 - 10250550
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||||||||||||||||||||||||||    
T  10250583 aaatgatatttgaacaactattttttacaacttt 10250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 11672117 - 11672060
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||||||| ||||||||||| ||  | |||| ||||||||||||||    
T  11672117 actttctctctattgctttgatttttgtgtcaataatttattttctttataaaatttt 11672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 38376482 - 38376421
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||||| |||||||| ||||| ||||||| |||| |||||||||| ||||    
T  38376482 tttctctctattactttgatttttgtgccactatctcattttctttgtaaaattttgattgt 38376421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 39605977 - 39606034
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaactttctctctcatgttcacatta 92  Q
    |||| ||||||||| |||||||| |||||| |||||||||||||||||  ||||||||    
T  39605977 tagagaaatgatatatgaacaaccatttttgacaactttctctctcatactcacatta 39606034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 56364017 - 56363976
Alignment:
Q  122 ttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgt 56363976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1816665 - 1816613
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    |||||||||||||||| ||||||||||||||||| ||||  |||||| |||||    
T  1816665 tctctctattgctttgatttttgtgtcactacctaattttttttatataattt 1816613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 46686248 - 46686300
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||  ||||||||    
T  46686248 aaatgatatttgtacaaccattttgtacaactttctctctcatactcacatta 46686300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 50721734 - 50721674
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||| ||||||||||||||||||| |  ||||||| |||| ||||||||| ||||||    
T  50721734 tctctctactgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgtt 50721674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 2575784 - 2575721
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||| ||||||| |  ||||||| |||| ||||| ||| |||||    
T  2575784 actttctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgt 2575721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 4974114 - 4974157
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcat 82  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  4974114 aaatgatatttgtacaactattttttaacaactttctctctcat 4974157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 12595620 - 12595561
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||| |||||| |||||  ||||||||||||| || |||||||    
T  12595620 tctctctattgttttggttttcgtgtcaatacctactttcctttataaatttatggttgt 12595561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 31413843 - 31413800
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcat 82  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  31413843 aaatgatatttgtacaactatttttgtacaactttctctctcat 31413800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 34616658 - 34616701
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| || ||||||| ||||||||||||||||||||    
T  34616658 gtttttgtgtcaatatctcattttctttataaaattttggttgt 34616701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 38510761 - 38510702
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| ||||||||   || |||| |||||||||||||||||||| ||||    
T  38510761 tctctctattgctttagtttttgtactaccaccttatttcctttataaaattttgattgt 38510702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 50831745 - 50831686
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||||||  ||||| ||| |||| ||||||| |||||||    
T  50831745 tctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgt 50831686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 1627547 - 1627489
Alignment:
Q  105 ctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||| ||||||||||||||||| || |||||||||| |||| |||| || |||||||    
T  1627547 ctctctgttgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgt 1627489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 22813713 - 22813659
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    ||||| |||||||||||| ||||||||||||||||| | || ||||||| |||||    
T  22813713 tttctttctattgctttgatttttgtgtcactacctaaatttctttatataattt 22813659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 26910283 - 26910321
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcattt 142  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  26910283 tctctctattgctttgatttttgtgccactacctcattt 26910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 29531678 - 29531640
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  29531678 tagagaaatgatatttgaacaaccattttttacaacttt 29531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 41347531 - 41347473
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttttacaactttctctctcatgttcacat 90  Q
    ||||||| |||| ||||||| ||||  |||||| |||||||||||||||||| ||||||    
T  41347531 ttttagagaaattatatttgtacaatcatttttgacaactttctctctcatgctcacat 41347473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 149514 - 149441
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||  ||||||||       ||||  ||||||||||||||| ||||||||||||||||||    
T  149514 acaactttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactacct 149441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 23369400 - 23369367
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  23369400 aaatgatatttgaacaaccattttttacaacttt 23369367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 27384190 - 27384243
Alignment:
Q  40 aaatgatatttgaacaactatttt-ttacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||| |||| ||||    
T  27384190 aaatgatatttgtacaaccattttattacaactttctctctcatattcatatta 27384243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 27964990 - 27965023
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||||||||||||| |||||    
T  27964990 aaatgatatttgaacaactattttttacgacttt 27965023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 29974386 - 29974341
Alignment:
Q  38 aaaaatgatatttgaacaactatttt-ttacaactttctctctcat 82  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||    
T  29974386 aaaaatgatatttgaacaactattttgtgacaactttctctttcat 29974341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 36871225 - 36871172
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| |||||||||||| ||||||||||||||| || ||| |||||    
T  36871225 aaatgatatttgtacaactatttttgtacaactttctctcttatattcgcatta 36871172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 37997259 - 37997292
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  37997259 aaatgatatttgaacaaccattttttacaacttt 37997292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 39478438 - 39478471
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||| ||||||||||||||||||||||||    
T  39478438 aaatgatatatgaacaactattttttacaacttt 39478471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 49449155 - 49449094
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||| |||||||| |||||||||||||  | |||||||||| |||| |||||||||| ||||    
T  49449155 tttcactctattgttttggtttttgtgctaatacctcattttctttgtaaaattttgattgt 49449094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 54848152 - 54848205
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||||| |||||| ||||||||||| |||||||||    
T  54848152 aaatgatatttgtacaaccatttttgtacaaccttctctctcatattcacatta 54848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 4914900 - 4914932
Alignment:
Q  31 attttagaaaaatgatatttgaacaactatttt 63  Q
    |||||||| ||||||||||||||||||||||||    
T  4914900 attttagagaaatgatatttgaacaactatttt 4914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 6309416 - 6309388
Alignment:
Q  43 tgatatttgaacaactattttttacaact 71  Q
    |||||||||||||||||||||||||||||    
T  6309416 tgatatttgaacaactattttttacaact 6309388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 7632451 - 7632391
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||| |||||||| || |  |||||||  ||| ||||||||||||||||    
T  7632451 tctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgtt 7632391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 24045286 - 24045351
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtca 131  Q
    ||||| |||||||||||  ||||||||       |||||||||||||||||||| |||||||||||    
T  24045286 acaaccttctctctcatactcacattatgtttttactttctctctattgctttgatttttgtgtca 24045351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 24310578 - 24310526
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatt 91  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||  |||||||    
T  24310578 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacatt 24310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 32130233 - 32130169
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||| ||||  ||||||| ||| ||| |||||| |||| || |||||||||||||    
T  32130233 actttctctctatttctttaatttttgtatcaatacatcattttctttgtataattttggttgtt 32130169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 37060359 - 37060424
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtca 131  Q
    ||||||||||||||||| |||||||||       || |||||||||||||||||||| || |||||    
T  37060359 acaactttctctctcatattcacattatatttttaccttctctctattgctttggttcttatgtca 37060424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 38792919 - 38792858
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgt 127  Q
    |||||||||||||||||  ||||||||       |||||||||||||||||||| |||||||    
T  38792919 acaactttctctctcatactcacattatatttttactttctctctattgctttgatttttgt 38792858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 51577696 - 51577748
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    |||||||||||||||| |||||||| |||||||| | || ||||||| |||||    
T  51577696 tctctctattgctttgatttttgtgccactacctaaatttctttatataattt 51577748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 52223258 - 52223310
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    ||||||||| ||||| |||||||||||| ||| |||||||||| |||| ||||    
T  52223258 actttctctgtattgttttggtttttgtatcaatacctcattttctttgtaaa 52223310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 53781911 - 53781871
Alignment:
Q  33 tttagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||||| |||||||||||| ||||||||||| |||||||||    
T  53781911 tttagagaaatgatatttgtacaactattttgtacaacttt 53781871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 12657265 - 12657394
Alignment:
Q  68 aactttctctctcatgttcacattannnnnnnactttctct--ctattgctttggtttttgtgtc-actacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||  ||||||||       |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  12657265 aactttctctctcatactcacattatctttttactttctctttctattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtc 12657364  T
Q  165 acatgtatggatgttcaagtaacacaagtc 194  Q
    |||| |||||||||| || |||||||||||    
T  12657365 acatatatggatgttgaaataacacaagtc 12657394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 29359680 - 29359805
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtta 165  Q
    |||||||||||||||||  ||||||||       ||||||||||||||||||||||||||||| || ||| |||||| |||| ||||||||||||||| |    
T  29359680 acaactttctctctcatactcacattatctttttactttctctctattgctttggtttttgtgccattacatcattttctttgtaaaattttggttgtca 29359779  T
Q  166 catgtatggatgttcaagtaacacaa 191  Q
     || |||| |||||||| ||||||||    
T  29359780 tatatatgaatgttcaaataacacaa 29359805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 649850 - 649909
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  649850 tctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 649909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 3159457 - 3159544
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||  ||| ||||||||| ||| ||||    
T  3159457 tctctctattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgttacagttatagatgttcaaataatacaa 3159544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 35369781 - 35369840
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35369781 tctctctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgt 35369840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 33100843 - 33100948
Alignment:
Q  60 ttttttacaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||| |||||||||||||||||  ||||||||       ||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  33100843 tttttgacaactttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcactacctcatttcctttataaaatttt 33100942  T
Q  158 ggttgt 163  Q
    ||||||    
T  33100943 ggttgt 33100948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 3851239 - 3851298
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3851239 tctctctattgttttggtttttctgtcactacctcatttcctttataaaattttggttgt 3851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 6693234 - 6693325
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||| || | |||| |||| |||||||| ||||||||    
T  6693234 actttctctctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcacatatatgaatgttcaaataacacaa 6693325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 26469440 - 26469499
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  26469440 tctctctattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 26469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 27465047 - 27464988
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  27465047 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 27464988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 41677314 - 41677227
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||| |||||||||||||  ||||||||||||  ||||||||||||| ||||| |||| ||||||||||||| ||||||||    
T  41677314 tctctctattgttttggtttttgtgcaactacctcattttatttataaaattttagttgtcacatatatggatgttcaaataacacaa 41677227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 37685372 - 37685463
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||||  ||||||||       |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  37685372 acaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaatttt 37685463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 37700146 - 37700055
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||||  ||||||||       |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  37700146 acaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaatttt 37700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 8350226 - 8350130
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||  |||||| |       |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  8350226 acaactttctctctcatactcacatgatctttttactttctctctattgctttggtttttgtgtcactaccttatttcctttgt-aaattttggttgt 8350130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 8828111 - 8828052
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  8828111 tctctctattgctttggtttttgtgccaatacctcatttcttttataaaattttggttgt 8828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 23645492 - 23645551
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  23645492 tctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 23645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 44914562 - 44914503
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  44914562 tctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgt 44914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 37275021 - 37274964
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  37275021 tctctattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgt 37274964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 19947738 - 19947675
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||  || |||||| ||| ||||||||||||||||||||    
T  19947738 actttctctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgt 19947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 31088262 - 31088321
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||    
T  31088262 tctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgt 31088321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 45121470 - 45121412
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  45121470 tctctctattgctttggtttttgtgccacta-ctcatttcctttgtaaaattttggttgt 45121412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 50932389 - 50932444
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  50932389 tctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgt 50932444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 52576292 - 52576233
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |  ||||||||||||||| |||||||||||||||    
T  52576292 tctctctattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgt 52576233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 45333792 - 45333845
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  45333792 tctctttattgctttgatttttgtgtcactacctcatttcctttgtaaaatttt 45333845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4776837 - 4776889
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  4776837 tctctctattactttgatttttgtgccactacctcatttcctttataaaattt 4776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 15083040 - 15082981
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||| ||||    
T  15083040 tctctctattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt 15082981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 18512333 - 18512274
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||| |||||    
T  18512333 tctctctattgctttagtttttatgtcaatacctcattttctttataaaattttagttgt 18512274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 37619625 - 37619684
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||| |||||||| || ||||||||||||||| |||||||||||||||    
T  37619625 tctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgt 37619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 37985372 - 37985317
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||| |||||    
T  37985372 tctattgctttaatttttgtgacactacctcatttcctttataaaattttagttgt 37985317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 40861256 - 40861193
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| || |||||||||||||| ||||| || ||||||||||||||||||| |||||    
T  40861256 actttctctctgttactttggtttttgtgccactatcttatttcctttataaaattttagttgt 40861193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 51080146 - 51080055
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgt 129  Q
    |||||||||||| |||||||||||| |||||||||||||| ||| | ||||||       ||||  ||||||||||||||||||||||||||    
T  51080146 aaatgatatttgtacaactatttttgacaactttctctctaatgcttacattatatttttactttctctctctattgctttggtttttgtgt 51080055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 31827029 - 31827091
Alignment:
Q  101 ctttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||| |||||||||||||||| || |||||||  ||| |||||||||||||||    
T  31827029 ctttctctctattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgt 31827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 51718684 - 51718563
Alignment:
Q  40 aaatgatatttgaacaactatttttt--acaactttctctctcatgttcacattannnnnnnac--tttctctctattgctttggtttttgtgtcactac 135  Q
    |||||||||||||||||| |||||||  |||||||||||||||||  ||||||||       ||  | ||||||||||  |||| |||||||||||||||    
T  51718684 aaatgatatttgaacaaccatttttttcacaactttctctctcatactcacattatctttttaccttctctctctattattttgatttttgtgtcactac 51718585  T
Q  136 ctcatttcctttataaaatttt 157  Q
     ||||||||||| |||| ||||    
T  51718584 ttcatttcctttgtaaagtttt 51718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 15470046 - 15469993
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||||||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  15470046 tctctctattgttttggtttttgcgctactacctcatttcctttataaaatttt 15469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 44519141 - 44519084
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||||||||||| ||||||||  | ||||||||||||||| |||||||||||||    
T  44519141 tctctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggtt 44519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 49065354 - 49065297
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    ||||||||||||||||||||||||| || ||| |||||| |||| |||||||||||||    
T  49065354 tctctctattgctttggtttttgtgccaatacttcattttctttgtaaaattttggtt 49065297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 9566990 - 9566891
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttct--ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||  ||||||||       |||||||  ||||||||||||||||||||||||| ||||  |||| || | |||||||||||||||    
T  9566990 acaactttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgt 9566891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 19055749 - 19055690
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| || || |||||||||||| ||||||||| |||||    
T  19055749 tctctctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgt 19055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 50726238 - 50726179
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||  ||||||||||||||    
T  50726238 tctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgt 50726179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 51571332 - 51571277
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||    
T  51571332 tctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgt 51571277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 14983787 - 14983913
Alignment:
Q  40 aaatgatatttgaacaactatttttta-caactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacc 136  Q
    |||||||||||| ||||| | |||||| |||||||||||||||| |||||||||       ||||  ||||||||||| ||| |||||||||||| || |    
T  14983787 aaatgatatttgtacaaccactttttaacaactttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaatatc 14983886  T
Q  137 tcatttcctttataaaattttggttgt 163  Q
    || ||| |||| | ||||| |||||||    
T  14983887 tctttttctttgtgaaattatggttgt 14983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 48103445 - 48103403
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcat 82  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  48103445 aaatgatatttgaacaactatttgtgacaactttctctctcat 48103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 36954674 - 36954771
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctc 138  Q
    |||||||||||| ||||| |||||| |||||||||| ||||||  ||||||||       ||||||||||| ||||||| ||| |||||||| ||||||    
T  36954674 aaatgatatttgtacaac-atttttgacaactttctttctcatactcacattatgtttttactttctctctcttgctttagttgttgtgtcaatacctc 36954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 48261221 - 48261270
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaa 153  Q
    ||||||||||||||||||||||||| || |||||| |||||||| |||||    
T  48261221 tctctctattgctttggtttttgtgccaatacctcttttcctttgtaaaa 48261270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 2269555 - 2269503
Alignment:
Q  111 attgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  2269555 attgctttggtttttgtgtcaataccttattttctaaataaaattttggttgt 2269503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 21401491 - 21401539
Alignment:
Q  116 tttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||| |||||||||| |||| |||||||||| |||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtt 21401539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 24981541 - 24981501
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggt 160  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  24981541 gtttttgtgtcaatacctcattttctttataaaattttggt 24981501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 30735368 - 30735328
Alignment:
Q  33 tttagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  30735368 tttagataaatgatatttgaacaaccattttttacaacttt 30735328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 2571713 - 2571776
Alignment:
Q  102 tttctctctattgctttgg-tttttgtgtcactacctcatttccttt-ataaaattttggttgt 163  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||||  |||||||||||||||    
T  2571713 tttctctctattgttttgtatttttgtgtcactacctcattttctttgttaaaattttggttgt 2571776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 3558890 - 3558974
Alignment:
Q  68 aactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    |||||||||||||||  ||||||||       |||||||||||||| |||| ||||||||  |||||| |||||| |||||||||    
T  3558890 aactttctctctcatactcacattatgtttttactttctctctattactttagtttttgtaccactacttcattttctttataaa 3558974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 3982016 - 3981957
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||| |||||||| || ||||||| |||| |||||||||| ||||    
T  3982016 tctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgt 3981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 10627800 - 10627741
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||| ||||||| ||| |||| ||||| ||||||||||||||| ||||    
T  10627800 tctctctattgttttgatttttgtatcaataccacattttctttataaaattttgtttgt 10627741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 27533474 - 27533415
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||| |||| ||||| ||||| |||||||||| |||| |||||||||||||||    
T  27533474 tctctttattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgt 27533415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 30735283 - 30735224
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||| |||||| ||  |||||||||||| ||||||||||||||| ||||    
T  30735283 tctctctattgttttagtttttatgctactacctcatttactttataaaattttgattgt 30735224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 37516600 - 37516667
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    |||||||||||||||||||||||||  |||||||| ||  |||||||| |||| |  |||||||||||    
T  37516600 actttctctctattgctttggttttcatgtcactatctactttcctttgtaaattaatggttgttaca 37516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 46907292 - 46907335
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||    
T  46907292 gtttttgtgtcaatacctcattttctttataaaattttgattgt 46907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 48470720 - 48470779
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||| |||| || || |||||||||||| |||||||||| ||||    
T  48470720 tctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgt 48470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 50775146 - 50775087
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||  || || ||| |||| ||||||| |||||||    
T  50775146 tctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgt 50775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 45640383 - 45640440
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttg 162  Q
    |||||||||||||||| |||||||| || || ||||||| |||| ||||||||||||||    
T  45640383 tctctctattgctttgatttttgtgccaatatctcattt-ctttgtaaaattttggttg 45640440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 50149029 - 50149087
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||||||||||||| |   |||||| |||| |||||||||| |||||    
T  50149029 tctctattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgtt 50149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 2571638 - 2571671
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  2571638 aaatgatatttgaacaaccattttttacaacttt 2571671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 3159379 - 3159412
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  3159379 aaatgatatttgaacaaccattttttacaacttt 3159412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 3826872 - 3826819
Alignment:
Q  40 aaatgatatttgaacaact-attttttacaactttctctctcatgttcacatta 92  Q
    |||||||||||| |||||| |||||| |||||||| |||||||| |||||||||    
T  3826872 aaatgatatttgtacaactaatttttaacaactttatctctcatattcacatta 3826819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 4857916 - 4857969
Alignment:
Q  31 attttagaaaaatgatatttgaacaa-ctattttttacaactttctctctcatg 83  Q
    |||||||| ||||||||||||||||| |  ||||| ||||||||||||||||||    
T  4857916 attttagagaaatgatatttgaacaatcactttttgacaactttctctctcatg 4857969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 8350264 - 8350231
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  8350264 aaatgatatttgaacaaccattttttacaacttt 8350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 37700184 - 37700151
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  37700184 aaatgatatttgaacaaccattttttacaacttt 37700151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 50726316 - 50726283
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||| ||||||||||||||||||||||    
T  50726316 aaatgatatttcaacaactattttttacaacttt 50726283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 51571418 - 51571471
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| | ||||| ||||||||||||||||| |||||||||    
T  51571418 aaatgatatttgtacaaccactttttgacaactttctctctcatattcacatta 51571471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 1603000 - 1603060
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttttta-caactttctctctcatgttcacatt 91  Q
    ||||||| || ||||||||| |||| ||||||||| ||||||||||||||||  |||||||    
T  1603000 ttttagataagtgatatttgtacaattattttttaacaactttctctctcatactcacatt 1603060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 9988033 - 9988093
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||| |||||||| || |  |||||||  ||| ||||||||||||||||    
T  9988033 tctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgtt 9988093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 11068460 - 11068492
Alignment:
Q  60 ttttttacaactttctctctcatgttcacatta 92  Q
    ||||| |||||||||||||||||||||||||||    
T  11068460 tttttgacaactttctctctcatgttcacatta 11068492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 38878892 - 38878844
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttata 150  Q
    ||||| |||||||||||| ||||||||||||||||| | || |||||||    
T  38878892 tttctttctattgctttgatttttgtgtcactacctaaatttctttata 38878844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 48256923 - 48256974
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||| | ||||||||||||||||| |||||||||    
T  48256923 aaatgatatttgtacaaccatttgt-acaactttctctctcatattcacatta 48256974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 49647225 - 49647193
Alignment:
Q  33 tttagaaaaatgatatttgaacaactatttttt 65  Q
    |||||| ||||||||||||||||||||||||||    
T  49647225 tttagagaaatgatatttgaacaactatttttt 49647193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 31249514 - 31249427
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||    
T  31249514 tctctctattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 31249427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 42768247 - 42768344
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| ||||||||  ||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  42768247 acaactttttctctcatactcacattatttttttactttctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgt 42768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 10731627 - 10731724
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaatattt 201  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||| |||| |||  |||||||| |||||||| || ||||||    
T  10731627 tctctctattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcacatatatcaatgttcaaataacacaactctatattt 10731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 29025341 - 29025400
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  29025341 tctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgt 29025400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 32501186 - 32501127
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32501186 tctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgt 32501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 27325839 - 27325893
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  27325839 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttg 27325893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 5277489 - 5277425
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacat 168  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  5277489 tctctctattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcacat 5277425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 11253532 - 11253476
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggt 160  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  11253532 tctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggt 11253476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 12898919 - 12898860
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||    
T  12898919 tctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgt 12898860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 34186688 - 34186747
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  34186688 tctctctattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgt 34186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 22719521 - 22719578
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||    
T  22719521 tctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggtt 22719578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 43397820 - 43397921
Alignment:
Q  64 ttacaactttctctctcatgttcacattannnnnnnactttctct--ctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||||||||||||||  ||||||||       |||||||||  ||||| |||||||||||||| ||||| ||||||| |||| |||||||||||||    
T  43397820 ttacaactttctctctcatactcacattatttttttactttctctttctattactttggtttttgtgccactatctcattttctttgtaaaattttggtt 43397919  T
Q  162 gt 163  Q
    ||    
T  43397920 gt 43397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 7271893 - 7271990
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| ||||||||  ||||||||       ||| ||||||||||||||||||||||||||||||| |||||||| |||  ||||||||| ||||    
T  7271893 acaactttatctctcatactcacattaattttttactctctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgt 7271990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 37449413 - 37449361
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  37449413 tctctattgctttggtttttgtgctactacctcatttcctttgtaaaattttg 37449361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 4054276 - 4054217
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||    
T  4054276 tctctttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgt 4054217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 36251408 - 36251466
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  36251408 tctctctattactttggtttt-gtgtcactacctcatttcctttgtaaaattttgattgt 36251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 36660440 - 36660381
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||| ||||    
T  36660440 tctctctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgt 36660381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 5740842 - 5740716
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactttctctct--attgctttggtttttgtgtcactacc 136  Q
    |||||||||||| ||||| | ||||| |||||||| ||||||||  ||||||||       |||||||||||  |||| |||||||||||||||  ||||    
T  5740842 aaatgatatttgtacaaccactttttgacaactttttctctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtcgatacc 5740743  T
Q  137 tcatttcctttataaaattttggttgt 163  Q
    || ||| |||| ||||||| |||||||    
T  5740742 tctttttctttgtaaaattatggttgt 5740716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 34639614 - 34639668
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||    
T  34639614 tctctctattactttggttattgtgtcactacctcattttatttgtaaaattttg 34639668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 39211056 - 39211150
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnac--tttctctctattgctttggtttttgtgtca 131  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||||||        ||  ||||||||||||| ||||||||||||||||    
T  39211056 aaatgatatttgaacaaccattttttgacaactttctctctcatactcacattttgtttttactttttctctctattgttttggtttttgtgtca 39211150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 43632332 - 43632290
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcattt 142  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  43632332 acttcctctctattgctttggtttttgtgtcaatacctcattt 43632290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 6511853 - 6511800
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatt 155  Q
    ||||||||||||  ||| |||||||||||| |||||| ||||||||||||||||    
T  6511853 tttctctctattattttagtttttgtgtcaatacctcttttcctttataaaatt 6511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 13106561 - 13106622
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtta 165  Q
    |||||||||||||||| ||||||||||| |||||| ||| |||| |||| || |||||||||    
T  13106561 tctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgtta 13106622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 13924025 - 13924078
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  13924025 aaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacatta 13924078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 23754696 - 23754636
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||| |||||| |||||||||||||||| |  ||||||| |||| ||||||||||||||||    
T  23754696 tctcactattgttttggtttttgtgtcaatcactcattttctttgtaaaattttggttgtt 23754636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 14233701 - 14233658
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcat 82  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  14233701 aaatgatatttgtacaactatttttttacaactttctctctcat 14233658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 37133848 - 37133793
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  37133848 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgt 37133793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 41776189 - 41776232
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcat 82  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  41776189 aaatgatatttgtacaactatttttgtacaactttctctctcat 41776232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 10902786 - 10902839
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||| |||||||| || ||| |||||| |||| |||||||||    
T  10902786 tctctctattgctttgatttttgtgccaatacatcattttctttgtaaaatttt 10902839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 11138908 - 11138953
Alignment:
Q  38 aaaaatgatatttgaacaactatttt-ttacaactttctctctcat 82  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||    
T  11138908 aaaaatgatatttgtacaactattttgtgacaactttctctctcat 11138953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 25987776 - 25987743
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  25987776 tctctctattgctttgatttttgtgtcactacct 25987743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 31249592 - 31249559
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  31249592 aaatgatatttgaacaaccattttttacaacttt 31249559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 37392185 - 37392132
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||    
T  37392185 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacatta 37392132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 38939246 - 38939193
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||  |||||||||||| ||||||||||||||||||  ||||||||    
T  38939246 aaatgatatttctacaactatttttgtacaactttctctctcatactcacatta 38939193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 44090968 - 44091001
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  44090968 tctctctattgctttgatttttgtgtcactacct 44091001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 4054354 - 4054322
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactt 72  Q
    |||||||||||||||||| ||||||||||||||    
T  4054354 aaatgatatttgaacaaccattttttacaactt 4054322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 11253619 - 11253579
Alignment:
Q  29 atattttagaaaaatgatatttgaacaactattttttacaa 69  Q
    |||||||| | |||||||||||||||||| |||||||||||    
T  11253619 atattttaaagaaatgatatttgaacaaccattttttacaa 11253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 34796461 - 34796522
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||||||| |||||||||||||||| ||| |  ||| | ||||||||||||||||||    
T  34796461 actttttctctattgttttggtttttgtgtcaatacat--ttttcgttataaaattttggttgt 34796522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 36816608 - 36816552
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||||||||||| ||||||||| | ||| |||||| ||||  |||||||||    
T  36816608 tttctctctattgctttgatttttgtgttaatacgtcattttctttgcaaaattttg 36816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 38578439 - 38578403
Alignment:
Q  33 tttagaaaaatgatatttgaacaactattttttacaa 69  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  38578439 tttagagaaatgatatttgaacaattattttttacaa 38578403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 42768182 - 42768126
Alignment:
Q  37 gaaaaatgatatttgaacaacta-ttttttacaactttctctctcatgttcacatta 92  Q
    ||||||||||||||| ||||||| ||||| |||| ||||||||||||  ||||||||    
T  42768182 gaaaaatgatatttgtacaactactttttgacaattttctctctcatactcacatta 42768126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 3937178 - 3937054
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctc 138  Q
    |||||||||||||||| ||||||| | |||||||||||||||||  ||||||||       ||||| |||||||| |||||||||||||| || ||||||    
T  3937178 aaatgatatttgaacatctattttgtgacaactttctctctcatactcacattatctttttactttatctctattactttggtttttgtgccaatacctc 3937079  T
Q  139 atttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||    
T  3937078 atttcctttataaaattttggttgt 3937054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 38073301 - 38073388
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||    
T  38073301 tctctctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 38073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 41989798 - 41989694
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctc--tattgctttggtttttgtgtcactacct 137  Q
    ||||||||||| |||||| ||||||||||||||||||||||||  ||||||||       ||||||||||  ||||||||||||||||||| ||||||||    
T  41989798 aaatgatattttaacaaccattttttacaactttctctctcatactcacattatatttttactttctctctttattgctttggtttttgtgccactacct 41989699  T
Q  138 cattt 142  Q
    |||||    
T  41989698 cattt 41989694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 43942652 - 43942771
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||       ||||  ||||||||||||||||||||||||      ||||    
T  43942652 aaatgatatttgaacaactattttttacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgt-----cacct 43942746  T
Q  138 catttcctttataaaattttggttg 162  Q
    ||||| |||| ||||||||||||||    
T  43942747 cattttctttgtaaaattttggttg 43942771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 44895562 - 44895503
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  44895562 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 44895503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 38861177 - 38861270
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaagtcaat 197  Q
    ||||||||||| ||||||||||||| |||||||| |||| |||| |||||||||| |||| ||||||||| || ||||| |||||||| |||||    
T  38861177 tctctctattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcacatgtatgaatattcaaataacacaactcaat 38861270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 43025419 - 43025484
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttaca 167  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  43025419 tttctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttaca 43025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 22918159 - 22918100
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  22918159 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgt 22918100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 24614303 - 24614252
Alignment:
Q  107 ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24614303 ctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttg 24614252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 25192911 - 25192848
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  25192911 actttctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgt 25192848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 38956608 - 38956549
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  38956608 tctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgt 38956549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 45420123 - 45420017
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtc 130  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||       ||||  ||||||||||| |||| |||||||| |    
T  45420123 ttagagaaatgatatttgaacaactattttttgacaactttctctctcatattcacattatcattttactttctctctctattgttttgatttttgtgcc 45420024  T
Q  131 actacct 137  Q
    |||||||    
T  45420023 actacct 45420017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 32529884 - 32529787
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||| |||| || |       ||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||    
T  32529884 acaactttctctctcatattcagatgatctttttactttctctttattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgt 32529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 40112944 - 40112885
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||    
T  40112944 tctctctattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgt 40112885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 41189533 - 41189474
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||    
T  41189533 tctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgt 41189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 48062138 - 48062197
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  48062138 tctctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgt 48062197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 40417857 - 40417914
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||| ||||| ||||||| || |||| |||||||||||||||    
T  40417857 tctctattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgt 40417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 35072348 - 35072292
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||| ||||||||||| |  ||||||| |||||||||||||||||||||    
T  35072348 tctattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtt 35072292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 35628004 - 35627953
Alignment:
Q  110 tattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  35628004 tattgctttggtttttgtgtcaatacctctttttctttataaaattatggtt 35627953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 44189300 - 44189257
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttccttt 147  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  44189300 tctctctattactttggtttttgtgtcactaactcatttccttt 44189257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 45851192 - 45851138
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||    
T  45851192 tctctattgctttggtttttgtgtcact---tcatttcctttgtaaaattttagttgt 45851138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 46022241 - 46022198
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  46022241 gtttttgtgtcaatacctcattttctttataaaattttggttgt 46022198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 46578125 - 46578066
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||| |||||||| || |||||| |||| |||||||||||||||||||    
T  46578125 tctctctattgatttgatttttgtgccaatacctcgtttcttttataaaattttggttgt 46578066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 26749020 - 26749062
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcat 82  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  26749020 aaatgatatttgaacaacaatttttgacaactttctctctcat 26749062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 33057375 - 33057408
Alignment:
Q  33 tttagaaaaatgatatttgaacaactatttttta 66  Q
    ||||||||||||||||||||||||||||||||||    
T  33057375 tttagaaaaatgatatttgaacaactatttttta 33057408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 35207580 - 35207641
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| | ||||||||| ||| ||||||  ||| |||||||||||||||    
T  35207580 tttctctctattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgt 35207641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 27570353 - 27570401
Alignment:
Q  35 tagaaaaatgatatttgaacaactatttttt-acaactttctctctcat 82  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcat 27570401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 31445399 - 31445459
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||| ||||||||||| |  ||||||| |||| |||||||||| |||||    
T  31445399 tctctctattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgtt 31445459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 35098689 - 35098633
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||| ||||||||||| |  ||||||| || ||||||||||||||||||    
T  35098689 tctattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtt 35098633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 7701641 - 7701684
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  7701641 gtttttgtgtcaatacctcattttctttataaaactttggttgt 7701684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 44649322 - 44649259
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| || ||||||||||||||||| ||  | |||| |||||||||||||| |||||    
T  44649322 actttctctcttttactttggtttttgtgtcaatatttaattttctttataaaattttagttgt 44649259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 47078313 - 47078254
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttt-ttacaactttctctctcatgttcacatta 92  Q
    ||||| |||||||||||||||| ||||||| | |||||||||||||||||  ||||||||    
T  47078313 ttagagaaatgatatttgaacatctattttatgacaactttctctctcatactcacatta 47078254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 24614388 - 24614358
Alignment:
Q  36 agaaaaatgatatttgaacaactatttttta 66  Q
    |||||||||||||||||||||||||||||||    
T  24614388 agaaaaatgatatttgaacaactatttttta 24614358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 25192952 - 25192919
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  25192952 aaatgatatttgaacaaccattttttacaacttt 25192919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 30064516 - 30064573
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    |||||||||||||||||||| ||||  ||||| ||| |||||| |||| |||||||||    
T  30064516 actttctctctattgctttgattttcatgtcaatacatcattttctttgtaaaatttt 30064573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 30941389 - 30941422
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  30941389 aaatgatatttgaacaaccattttttacaacttt 30941422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 34304754 - 34304721
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttttt 65  Q
    |||||||||||||||||||| |||||||||||||    
T  34304754 ttttagaaaaatgatatttgtacaactatttttt 34304721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 38547347 - 38547294
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||  ||||||||    
T  38547347 aaatgatatttgtacaactattttttgacaactttctttctcatactcacatta 38547294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 40113022 - 40112993
Alignment:
Q  40 aaatgatatttgaacaactattttttacaa 69  Q
    ||||||||||||||||||||||||||||||    
T  40113022 aaatgatatttgaacaactattttttacaa 40112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 44895640 - 44895607
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  44895640 aaatgatatttgaacaaccattttttacaacttt 44895607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 47391317 - 47391256
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| ||||| |||| ||||||||||| ||  |||||||||||||||||| ||| ||||    
T  47391317 tttctctttattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgt 47391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 47391382 - 47391345
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctct 77  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  47391382 aaatgatatttgaacaaccatttttaacaactttctct 47391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 17002422 - 17002470
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattt 156  Q
    |||||| ||||||||||||||||| |  ||||||| |||||||||||||    
T  17002422 tctattactttggtttttgtgtcaatcactcattttctttataaaattt 17002470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 17945149 - 17945197
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    ||||||||||||||||||||  ||||||||| ||  |||||||||||||    
T  17945149 tctctctattgctttggtttcggtgtcactatctactttcctttataaa 17945197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 22605437 - 22605469
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcacta 134  Q
    ||||||||||||| |||||||||||||||||||    
T  22605437 tttctctctattgttttggtttttgtgtcacta 22605469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 33578310 - 33578246
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    ||||||||||||||  |||||||||||| ||| |  ||||||| |||| ||||||||| ||||||    
T  33578310 actttctctctattattttggtttttgtatcaatcactcattttctttgtaaaattttagttgtt 33578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 36703861 - 36703813
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    ||||||||||||||| ||||  ||||||||| || ||||||||||||||    
T  36703861 tctctctattgctttagtttccgtgtcactatctaatttcctttataaa 36703813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 5080557 - 5080470
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||| ||||||||    
T  5080557 tctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcacatatatggatgttcaaataacacaa 5080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 8098587 - 8098500
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||| |||||||| ||||||||    
T  8098587 tctctctattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcacatatatgaatgttcaaataacacaa 8098500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 15974624 - 15974748
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctc--tctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||       | ||||||  |||||||||||||||||||||| ||||| |    
T  15974624 aaatgatatttgaacaac-atttgttacaactttctctctcatattcacattatctttttattttctctctctattgctttggtttttgtgttactactt 15974722  T
Q  138 catttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||||||||    
T  15974723 catttcctttgtaaaattttggttgt 15974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 552874 - 552933
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  552874 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 552933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 26595430 - 26595490
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  26595430 tctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtt 26595490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 32316918 - 32316859
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  32316918 tctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgt 32316859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 13689982 - 13689925
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  13689982 tctctattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgt 13689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 18737623 - 18737498
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacattannnnnnnactttctctct--attgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||||| |||||||| |||||| ||||||||  |  |||||       |||||||||||  |||| ||||||||||||| || |||||    
T  18737623 aaatgatatttgaacaaccattttttataactttttctctcatacttgcattatctttttactttctctctttattgttttggtttttgtgacaatacct 18737524  T
Q  138 catttcctttataaaattttggttgt 163  Q
    ||||| |||| |||||||||||||||    
T  18737523 cattttctttgtaaaattttggttgt 18737498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 31077877 - 31077934
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  31077877 tctctattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgt 31077934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 33430342 - 33430293
Alignment:
Q  114 gctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 33430293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 14818013 - 14818072
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  14818013 tctctttattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgt 14818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 5522667 - 5522569
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtt 164  Q
    |||||||| |||||||| |||||||||       |||||||||||||||||||||||||||||  | |||||  ||||||||||||| || ||||||||    
T  5522667 acaactttatctctcatattcacattatacttttactttctctctattgctttggtttttgtgctaatacctactttcctttataaatttatggttgtt 5522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 5694143 - 5694082
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||| ||||||    
T  5694143 tttctctctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgt 5694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 1156801 - 1156860
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||| ||||    
T  1156801 tctctctattactttggtttttgtgccactatctcatttcctttacaaaattttgattgt 1156860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 277070 - 277131
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  277070 tttctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgt 277131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 4820446 - 4820507
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||| ||||    
T  4820446 tttctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgt 4820507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 16199547 - 16199590
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  16199547 gtttttgtgtcaatacctcattttctttataaaattttggttgt 16199590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 17551368 - 17551310
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||| |||||||||||||    
T  17551368 tctctctattgttttggtttttgtgtcaatccctcattttctttat-aaattttggttgt 17551310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 22079553 - 22079494
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| ||| |||||| ||||  ||||||||||||||    
T  22079553 tctctctattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgt 22079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 34047468 - 34047527
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| || || ||| ||| |||| |||||||||||||||    
T  34047468 tctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgt 34047527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 32317001 - 32316963
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  32317001 tagagaaatgatatttgaacaactattttttacaacttt 32316963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 2242013 - 2241956
Alignment:
Q  106 tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||| | |||||||| |||| ||  |||||||||||    
T  2242013 tctctattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgt 2241956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 32644626 - 32644679
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  32644626 aaatgatatttgtacaactattttttgacaactttctctctcatactcacatta 32644679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 2060690 - 2060601
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtg 128  Q
    |||||||||||||| ||| ||||| | |||||||| ||||||||  ||||||||       || ||||||||||||||||||||||||||    
T  2060690 aaatgatatttgaataaccattttatgacaactttttctctcatactcacattatatttttaccttctctctattgctttggtttttgtg 2060601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 20998135 - 20998087
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    |||||||||||||||||||||||| ||| |||||||||| |||| ||||    
T  20998135 tctctctattgctttggtttttgtatcaatacctcattttctttgtaaa 20998087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 33603264 - 33603216
Alignment:
Q  110 tattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||| ||||||||||| |||||||||| |||| ||||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttg 33603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 3853297 - 3853238
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| || ||||||| |||| |||||| || |||||    
T  3853297 tctctctattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgt 3853238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 31883293 - 31883234
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||||||  ||||| ||| |||| ||||||| |||||||    
T  31883293 tctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgt 31883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 1156724 - 1156757
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  1156724 aaatgatatttgaacaaccattttttacaacttt 1156757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 5739749 - 5739708
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttat 149  Q
    |||||||||||| ||||||||||||||||| |||| ||||||    
T  5739749 tctattgctttgatttttgtgtcactacctaattttctttat 5739708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 8098663 - 8098630
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  8098663 aaatgatatttgaacaaccattttttacaacttt 8098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 9395394 - 9395341
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||  ||||||||    
T  9395394 aaatgatatttgtacaactatttttgtacaactttctctttcatactcacatta 9395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 14910258 - 14910291
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  14910258 tctctctattgctttgatttttgtgtcactacct 14910291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 22079631 - 22079598
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  22079631 aaatgatatttgaacaaccattttttacaacttt 22079598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 24900855 - 24900908
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatttt 157  Q
    ||||||||||||||||||||||||| || |  ||||||| |||| |||||||||    
T  24900855 tctctctattgctttggtttttgtgccaatcactcattttctttgtaaaatttt 24900908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 25811906 - 25811873
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  25811906 aaatgatatttgaacaaccattttttacaacttt 25811873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 30457429 - 30457462
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactatttttt 65  Q
    ||||||| ||||||||||||||||||||||||||    
T  30457429 ttttagagaaatgatatttgaacaactatttttt 30457462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 34047390 - 34047423
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  34047390 aaatgatatttgaacaaccattttttacaacttt 34047423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 35646426 - 35646551
Alignment:
Q  68 aactttctctctcatgttcacattannnnnnnactttctctctat--tgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtta 165  Q
    |||||||||||||||  ||||||||       |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |    
T  35646426 aactttctctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtca 35646525  T
Q  166 catgtatggatgttcaagtaacacaa 191  Q
    ||| |||||||||| || ||||||||    
T  35646526 catatatggatgtttaaataacacaa 35646551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 14923086 - 14923211
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcaca--ttannnnnnnactttctc--tctattgctttggtttttgtgtcactac 135  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||  | |       ||||||||  ||||||||||||||||||||| ||||||    
T  14923086 aaatgatatttgaacaaccattttttacaactttctctctcatactcacacatgatctttttactttctctctctattgctttggtttttgtgccactac 14923185  T
Q  136 ctcatttcctttataaaattttggtt 161  Q
    |||||||| ||| |||||||||||||    
T  14923186 ctcatttcttttgtaaaattttggtt 14923211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 33037599 - 33037660
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  33037599 tttctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgt 33037660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 26791274 - 26791175
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactt--tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| ||||||||       ||||  ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  26791274 acaactttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgt 26791175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 36739029 - 36739088
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  36739029 tctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgt 36739088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 28467440 - 28467384
Alignment:
Q  107 ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  28467440 ctctattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgt 28467384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 7287179 - 7287120
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  7287179 tctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgt 7287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 41321336 - 41321395
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  41321336 tctctctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgt 41321395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18258785 - 18258724
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  18258785 tttctctatatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 18258724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 1079982 - 1079855
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttc--tctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||| |||||||||       ||||||  ||| ||||||||||| ||||||| || |||||||||| |||| |||||||||  ||||    
T  1079982 acaactttctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgt 1079883  T
Q  164 tacatgtatggatgttcaagtaacacaa 191  Q
     |||| |||| |||||||| ||||||||    
T  1079882 cacatttatgaatgttcaaataacacaa 1079855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 1764305 - 1764364
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| |||||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  1764305 tctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgt 1764364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 7076558 - 7076499
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||||    
T  7076558 tctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgt 7076499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 14051305 - 14051246
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  14051305 tctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgt 14051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 28306122 - 28306063
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||    
T  28306122 tctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgt 28306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 1274439 - 1274497
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttg 162  Q
    |||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||    
T  1274439 tctctctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg 1274497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 1671627 - 1671682
Alignment:
Q  108 tctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  1671627 tctattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgt 1671682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 5168264 - 5168323
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| |||||||| ||||||||||||| |||| ||||||||| |||||    
T  5168264 tctctctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgt 5168323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 19521993 - 19521950
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttccttt 147  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  19521993 tctctctattgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 19844336 - 19844241
Alignment:
Q  68 aactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||| | |||||||       |||||||||||||||||||||||| |||| || |||||| ||| |||| ||||||| |||||||    
T  19844336 aactttctctctcatatccacattatgtttttactttctctctattgctttggtttgtgtgccaatacctctttttctttgtaaaattatggttgt 19844241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 13168601 - 13168662
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||| |||||| |||||||||||||| ||||| |||||||||||| |||||||||| ||||    
T  13168601 tttctttctattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgt 13168662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 43153125 - 43153064
Alignment:
Q  32 ttttagaaaaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    ||||||| |||||||||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  43153125 ttttagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcacatta 43153064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 6596408 - 6596460
Alignment:
Q  100 actttctctctattgctttggtttttgtgtcactacctcatttcctttataaa 152  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||| ||||    
T  6596408 actttctctctattgctttggtttttgtgttaatacctcattttctttgtaaa 6596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 2972405 - 2972464
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  | |||||||| ||||    
T  2972405 tctctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgt 2972464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 8686978 - 8687033
Alignment:
Q  110 tattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgtta 165  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtta 8687033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 17626083 - 17626126
Alignment:
Q  120 gtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  17626083 gtttttgtgtcaatacctcattttctttataaaattttggttgt 17626126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 18660840 - 18660899
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| || ||| ||||||||||| ||||| |||| ||||    
T  18660840 tctctctattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt 18660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 19522076 - 19522038
Alignment:
Q  35 tagaaaaatgatatttgaacaactattttttacaacttt 73  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19522076 tagaaaaatgatatttgaacaaccattttttacaacttt 19522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 8442173 - 8442226
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| |||| ||||||| |||||||||||||||||| |||||||||    
T  8442173 aaatgatatttgtacaattatttttgtacaactttctctctcatattcacatta 8442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 12203161 - 12203214
Alignment:
Q  40 aaatgatatttgaacaactattttt-tacaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  12203161 aaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacatta 12203214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 42175000 - 42175054
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttg 158  Q
    |||||||||||| ||||| | |||||||||||||  |||||||||||||||||||||    
T  42175000 tttctctctattcctttgatctttgtgtcactac--catttcctttataaaattttg 42175054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 7552995 - 7552898
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||   ||||||||       |||||||||||| ||| ||| ||||||||||| ||| |||||| ||||  ||||||||||||||    
T  7552995 acaactttctctctcacactcacattatgtttttactttctctctactgcattgatttttgtgtcaatacatcattttctttgcaaaattttggttgt 7552898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 8097333 - 8097384
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaatt 155  Q
    |||||||||||||||| ||||||||||| ||| || ||| ||||||||||||    
T  8097333 tctctctattgctttgatttttgtgtcaatacttctttttctttataaaatt 8097384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 16972155 - 16972104
Alignment:
Q  40 aaatgatatttgaacaactattttttacaactttctctctcatgttcacatt 91  Q
    ||||||||||| |||||| |||||||||||| ||||||||||| || |||||    
T  16972155 aaatgatattttaacaaccattttttacaaccttctctctcatatttacatt 16972104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 22649691 - 22649612
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctc--tattgctttggtttttgtgtcactacctcatttc 143  Q
    |||| ||||||||||||  ||||||||       ||||||||||  ||||||||| ||||||||||||||||||||||||    
T  22649691 acaattttctctctcatactcacattatctttttactttctctccatattgctttagtttttgtgtcactacctcatttc 22649612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 33958249 - 33958190
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||||||||||| || ||| ||| |||| |||| || |||||||    
T  33958249 tctctctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgt 33958190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 39591761 - 39591820
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||| ||||||| |  ||||||| |||| ||||| |||||||||    
T  39591761 tctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgt 39591820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 39592153 - 39592212
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||||||||||||||| ||||||| |  ||||||| |||| ||||| |||||||||    
T  39592153 tctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgt 39592212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 13309880 - 13309910
Alignment:
Q  35 tagaaaaatgatatttgaacaactatttttt 65  Q
    |||||||||||||||||||||||||||||||    
T  13309880 tagaaaaatgatatttgaacaactatttttt 13309910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 21210830 - 21210876
Alignment:
Q  37 gaaaaatgatatttgaacaacta-ttttttacaactttctctctcat 82  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  21210830 gaaaaatgatatttgaacaaccactttttgacaactttctctctcat 21210876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 5721885 - 5721856
Alignment:
Q  40 aaatgatatttgaacaactattttttacaa 69  Q
    ||||||||||||||||||||||||||||||    
T  5721885 aaatgatatttgaacaactattttttacaa 5721856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 7076428 - 7076461
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  7076428 aaatgatatttgaacaaccattttttacaacttt 7076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 13089771 - 13089738
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  13089771 tctctctattgctttgatttttgtgtcactacct 13089738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 14206403 - 14206456
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||    
T  14206403 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacatta 14206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 25561009 - 25560949
Alignment:
Q  102 tttctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    |||||||| ||||||| ||||||||||||| || ||| ||| |||||||||||| |||||||    
T  25561009 tttctctccattgcttcggtttttgtgtcaatatctc-ttttctttataaaattatggttgt 25560949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 28306200 - 28306167
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  28306200 aaatgatatttgaacaaccattttttacaacttt 28306167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 26686923 - 26686984
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgt 127  Q
    ||||||||||||||||| |||||||||       ||||||||||||||| |||| |||||||    
T  26686923 acaactttctctctcatattcacattatatttttactttctctctattgttttgatttttgt 26686984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 26956654 - 26956715
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttctctctattgctttggtttttgt 127  Q
    ||||||||||||||||| |||||||||       ||||||||||||||| |||| |||||||    
T  26956654 acaactttctctctcatattcacattatatttttactttctctctattgttttgatttttgt 26956715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 35233351 - 35233379
Alignment:
Q  43 tgatatttgaacaactattttttacaact 71  Q
    |||||||||||||||||||||||||||||    
T  35233351 tgatatttgaacaactattttttacaact 35233379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 35650039 - 35649991
Alignment:
Q  45 atatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    ||||||||||||||||||||| |||||||| ||||||||  ||||||||    
T  35650039 atatttgaacaactattttttgacaactttttctctcatactcacatta 35649991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 39807688 - 39807652
Alignment:
Q  119 ggtttttgtgtcactacctcatttcctttataaaatt 155  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  39807688 ggtttttgtgtcagtacctcatttcctttgtaaaatt 39807652  T

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Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 42446365 - 42446325
Alignment:
Q  34 ttagaaaaatgatatttgaacaactatttttt-acaacttt 73  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  42446365 ttagagaaatgatatttgaacaactattttttgacaacttt 42446325  T

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Target: scaffold0067 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 35604 - 35691
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacacaa 191  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||| ||||||| ||||| ||||||||    
T  35604 tctctctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacatatatggatattcaaataacacaa 35691  T

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Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 35526 - 35559
Alignment:
Q  40 aaatgatatttgaacaactattttttacaacttt 73  Q
    |||||||||||||||||| |||||||||||||||    
T  35526 aaatgatatttgaacaaccattttttacaacttt 35559  T

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Target: scaffold0199 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 8749 - 8808
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8749 tctctctgttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 8808  T

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Target: scaffold0056 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 76609 - 76550
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  76609 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 76550  T

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Target: scaffold0098 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 49336 - 49433
Alignment:
Q  66 acaactttctctctcatgttcacattannnnnnnactttct--ctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggtt 161  Q
    |||||||||||||||||  ||||||||       |||||||  |||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  49336 acaactttctctctcatactcacattatctttttactttctcactctattattttggtttttgtgtcactacctcatttcctttgtaaaattttggtt 49433  T

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Target: scaffold0519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 11863 - 11919
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggt 160  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  11863 tctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggt 11919  T

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Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 10953 - 10867
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgttacatgtatggatgttcaagtaacaca 190  Q
    ||||||||||  |||| ||||||||| |||||||||||| ||||||||||||||| |||| |||| || ||||||| || |||||||    
T  10953 tctctctattattttgatttttgtgttactacctcattttctttataaaattttgattgtcacatataaggatgtttaaataacaca 10867  T

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Target: scaffold0087 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 53351 - 53292
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacctcatttcctttataaaattttggttgt 163  Q
    ||||||| ||| ||| |||||||||||| || ||||||| ||||||||| ||||||||||    
T  53351 tctctcttttgttttagtttttgtgtcaatatctcattttctttataaatttttggttgt 53292  T

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Target: scaffold0618 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 8942 - 8909
Alignment:
Q  104 tctctctattgctttggtttttgtgtcactacct 137  Q
    |||||||||||||||| |||||||||||||||||    
T  8942 tctctctattgctttgatttttgtgtcactacct 8909  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 31657 - 31604
Alignment:
Q  40 aaatgatatttgaacaactatttttt-acaactttctctctcatgttcacatta 92  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||    
T  31657 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacatta 31604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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