View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13243_high_19 (Length: 254)
Name: NF13243_high_19
Description: NF13243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13243_high_19 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 37125264 - 37125095
Alignment:
| Q |
77 |
catcagagaatacaatagtataattgattgaccccaattctacctactgccaactcttatattctttcaaaaaccaacttttatatgtattgcattttcg |
176 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
37125264 |
catcagagaatacaatagtataattgattgaccccaattctacctactgccaacttttatattctttcaaaaacaaagttttatatgtattgtattttcg |
37125165 |
T |
|
| Q |
177 |
tcatataattaagcaagctagttatataatctaccactcgaaagctgcagaaatctggattataattttc |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37125164 |
tcatataattaagcaagctagttatataatctaccactcgaaagctgcagaaatctggattataattttc |
37125095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University