View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13243_low_17 (Length: 257)
Name: NF13243_low_17
Description: NF13243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13243_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 242
Target Start/End: Original strand, 25017563 - 25017796
Alignment:
| Q |
9 |
gacatcatcagaagattgaatctcttgaagggtatcagtatttgtagcaaaagttacaaattttggagagagaaacttatggggtggcttcaatgtccaa |
108 |
Q |
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| T |
25017563 |
gacatcatcagaagattgaatctgttgaagggtatcagtatttgtagcaaaagttacaaattttggagagagaaacttatgcggtggcttcaatgtccaa |
25017662 |
T |
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| Q |
109 |
gaacaagaagaagcatagttaataatattggaagtggaagagagagagtgtgaagaatttggcttgaaacggttaatggtagctaatctgtggtagtgag |
208 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25017663 |
gaacaagaagaaccatagttaataatattggaagtggaagagagagagtgtgaagaatttggcttgaaacggttaatggtagctaatctgtggtagtgag |
25017762 |
T |
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| Q |
209 |
agagtttgaaattgaagagtggttcagagaaaac |
242 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
25017763 |
agagtttgaaattgaagagtggttcagagaaaac |
25017796 |
T |
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