View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13245_low_23 (Length: 364)
Name: NF13245_low_23
Description: NF13245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13245_low_23 |
 |  |
|
| [»] scaffold0691 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 319; Significance: 1e-180; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 2749034 - 2748688
Alignment:
| Q |
1 |
gttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctat |
100 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2749034 |
gttcttcttttgggacttcaataccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcatgccattttccattttctctctctcctat |
2748935 |
T |
 |
| Q |
101 |
gctaatgctgcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatt |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2748934 |
gctaatgctgcttgaagttccttgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatt |
2748835 |
T |
 |
| Q |
201 |
tcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattagcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
2748834 |
tcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccgcatctaggaggattggccctatgcattagcc |
2748735 |
T |
 |
| Q |
301 |
gaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2748734 |
gaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
2748688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 2855910 - 2856258
Alignment:
| Q |
2 |
ttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctatg |
101 |
Q |
| |
|
|||||||||||| |||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||| || |
|
|
| T |
2855910 |
ttcttcttttgggccttcaatgcctacaacttctgtttcttcaatgaaaagggaagacagtcgaggatcacgccatcttccattttctgtctctccactg |
2856009 |
T |
 |
| Q |
102 |
ctaatgct---gcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaa |
198 |
Q |
| |
|
| | || |||||| | |||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
2856010 |
cggtttctttggcttgaggatccttgctcgtgtgaaatttgaaagttatacctctggcttctttccttgattccacgaattgacaacttgatgtcctgaa |
2856109 |
T |
 |
| Q |
199 |
tttcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattag |
298 |
Q |
| |
|
| || ||||| || | |||| |||||||||||||||||||| | |||| || |||| |||||||||||||| || | ||||||||| |||||| || | |
|
|
| T |
2856110 |
tctctgatgcaattttatgatggggaatcaaagttttgattcggcttgtaaccttgttgactaaagatccacgtccatgaggattggccctatgtatcaa |
2856209 |
T |
 |
| Q |
299 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2856210 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
2856258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 5412924 - 5412597
Alignment:
| Q |
2 |
ttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctatg |
101 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||| || || ||||||||||||||||| |||||| ||||||||||| |||||| || |
|
|
| T |
5412924 |
ttcttcttttggaccttcaattcctacaacttctgtttctgtaatgaatagggaagacagtcgaggatctcgccatcttccattttctgtctctctactg |
5412825 |
T |
 |
| Q |
102 |
ctaatgctgcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaattt |
201 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| | |
|
|
| T |
5412824 |
ctgttgctgcttgaa------------------atttgaaagttatacctctcacttctttccttgattccacgaattgacaacttaatgtcctgaatct |
5412743 |
T |
 |
| Q |
202 |
cagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattagccg |
301 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||| | |||||||| ||||||||||||||| |
|
|
| T |
5412742 |
cagatgctatctgatgatggggaatcaaagttttgatcaagcttgcaatcttgcagactaaagatctgcatccaagaggattgaccctatgcattagccg |
5412643 |
T |
 |
| Q |
302 |
aaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5412642 |
atggtattcgtcaatgacatcttcaatgcgaaatgatgcttctctc |
5412597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 15 - 347
Target Start/End: Complemental strand, 2797386 - 2797051
Alignment:
| Q |
15 |
ccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttc--tctctctccta-tgctaatgctgc |
111 |
Q |
| |
|
||||||| ||| |||| | | ||||||||||||||||| ||||||||||||||||||| |||| ||| ||| || ||||||| || || | |||||| |
|
|
| T |
2797386 |
ccttcaaatccgacaattgcagtttcttcaataaaaagggaagacagtcgaggatcacaccatcttctattatccgtctctctactgctgttgttgctgc |
2797287 |
T |
 |
| Q |
112 |
ttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatttcagatgctat |
211 |
Q |
| |
|
|||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||| |
|
|
| T |
2797286 |
ttgatgatcctggtgtctgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgatatcttaatgttcttaatctcagatgctat |
2797187 |
T |
 |
| Q |
212 |
atgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattagccgaaggtattca |
311 |
Q |
| |
|
|| ||| ||| |||||| ||||||||| | ||||||||||||| |||||||||||| |||| ||||||| || ||||||||| ||| ||||||||||| |
|
|
| T |
2797186 |
ctggtgaagggaaatcaatgttttgattagacttgcaatcttgcagactaaagatccgcatcccggaggataggccctatgcatcagctgaaggtattca |
2797087 |
T |
 |
| Q |
312 |
tcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
2797086 |
tcaatgacatcttcaatgcgaaatgatgcttctctc |
2797051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 2769107 - 2768759
Alignment:
| Q |
2 |
ttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcc--ta |
99 |
Q |
| |
|
||||||| |||| ||||| | ||| |||| |||||||||||||||||| || ||||||| ||||||||||||||| ||||| ||||| |||||| || |
|
|
| T |
2769107 |
ttcttctcttgggccttccaatcctacaatttctgtttcttcaataaagagggaagacatccgaggatcacgccatcttccactttctgactctccacta |
2769008 |
T |
 |
| Q |
100 |
-tgctaatgctgcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaa |
198 |
Q |
| |
|
|| | ||||| |||| | |||| |||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
2769007 |
ctgttcctgctgtttgaggatccttgttcatgtgaagtttgaaagctatacctctcgcttctttccttgattccacgaattgacaacttaatgtcctgaa |
2768908 |
T |
 |
| Q |
199 |
tttcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattag |
298 |
Q |
| |
|
| || |||| || | |||||||||| |||||||||||||| | |||||||||||| || ||||||||| | ||| ||| |||||| |||||| | | |
|
|
| T |
2768907 |
tctctaatgcaattttatgacggggagtcaaagttttgattaggcttgcaatcttgaagattaaagatccgcgtctgggacgattggccctatgggtcaa |
2768808 |
T |
 |
| Q |
299 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2768807 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
2768759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 2759253 - 2758904
Alignment:
| Q |
1 |
gttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcc--t |
98 |
Q |
| |
|
||||||||||||| ||||||| ||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| | | |
|
|
| T |
2759253 |
gttcttcttttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgaggatcacgccatcttccattttctttctcttcggt |
2759154 |
T |
 |
| Q |
99 |
a-tgctaatgctgcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctga |
197 |
Q |
| |
|
| || | ||||| |||| | |||| |||| | |||||||||||||||||||||| | ||||||||||||||||| |||||| | || ||||| ||| |
|
|
| T |
2759153 |
agtgttgctgctgtttgaggatccttgttcatttgaaatttgaaagttatacctcacgcttctttccttgattccgtgaattgtcagcttgatgtcttga |
2759054 |
T |
 |
| Q |
198 |
atttcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcatta |
297 |
Q |
| |
|
|| || ||||| || | |||||||||||||||||||||||| | |||| ||||||| || || |||||| | | ||||||||||| | |||| || | |
|
|
| T |
2759053 |
atctctgatgcaattttgtgacggggaatcaaagttttgattgggcttgtaatcttgttgaatacagatccgctaccaggaggattggccgtatggatca |
2758954 |
T |
 |
| Q |
298 |
gccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||||||| |||||||||||| |
|
|
| T |
2758953 |
gccgaaggtattcgtcaattatatcttcaatgcgaaacgatgcttctctc |
2758904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 2807290 - 2806955
Alignment:
| Q |
17 |
ttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctatgctaatgctgcttgaa |
116 |
Q |
| |
|
||||| ||| |||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| |||| ||| |||||| |
|
|
| T |
2807290 |
ttcaaatcctacaatttctctttcttcaataaaaagggaagacagtcgaggatcacgccatcttccattttctgtctctctagtgctgttgcggcttgat |
2807191 |
T |
 |
| Q |
117 |
gttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatttcagatgctatatgat |
216 |
Q |
| |
|
| |||| |||| ||||||||||| |||||||||||||||||||||||||||||||| |||| || | |||||||| | || | |||||||||||||| |
|
|
| T |
2807190 |
gatccttgttcatgtgaaatttgtaagttatacctctcacttctttccttgattccgcgaaccgacaccttaatgtctcggatcttagatgctatatgat |
2807091 |
T |
 |
| Q |
217 |
gacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatcca---catctaggagga------ttggtcctatgcattagccgaaggta |
307 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| || | |||||||| |||| ||||||| || | | ||||||| |||||| |||| |
|
|
| T |
2807090 |
gacggggaatcaaagttttgaccaggcttgcaatcttgtagaatgaagatccaccgcatccaggaggactggattttgccatatgcatcagccgatggta |
2806991 |
T |
 |
| Q |
308 |
ttcatcaatgacatcttcaatgcgaaatgatgcttc |
343 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||| |
|
|
| T |
2806990 |
ttcatcgatgatatcttcaatgcgaaatgatgcttc |
2806955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 15 - 347
Target Start/End: Complemental strand, 2790392 - 2790048
Alignment:
| Q |
15 |
ccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttc--tctctctccta-tgctaatgctgc |
111 |
Q |
| |
|
||||||| ||| |||| | | ||||||||||| ||||| ||||||| ||||||||| ||||| ||| ||| || ||||||| || || | |||||| |
|
|
| T |
2790392 |
ccttcaaatccgacaattgcagtttcttcaatgaaaagggaagacaaccgaggatcatgccatcttctattgtccgtctctctactgctgttgctgctgc |
2790293 |
T |
 |
| Q |
112 |
ttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatttcagatgctat |
211 |
Q |
| |
|
|||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| |
|
|
| T |
2790292 |
ttgatgatcctggtgtctgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgatatcttaatgtttttaatctcagatgctat |
2790193 |
T |
 |
| Q |
212 |
atgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagat---ccacatctaggaggattg------gtcctatgcattagccga |
302 |
Q |
| |
|
|||||| |||||||||||||||||||| | ||||||||||||| || ||||||| | |||| || ||||||| | ||||||||| |||||| |
|
|
| T |
2790192 |
ctgatgatggggaatcaaagttttgattaggcttgcaatcttgcagaataaagattgacggcatccagaaggattggattttgccctatgcatgagccga |
2790093 |
T |
 |
| Q |
303 |
aggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
2790092 |
aggtattcatcgatgatatcttcaatgcgaaatgatgcttctctc |
2790048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 2838700 - 2839048
Alignment:
| Q |
2 |
ttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctccta-- |
99 |
Q |
| |
|
||||||| |||| ||||||| ||| |||| ||||||||||||||| ||||| |||||||||||||| || ||||| ||||||||||| |||||| |
|
|
| T |
2838700 |
ttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgagggtcgtgccatcttccattttctgcctctccagga |
2838799 |
T |
 |
| Q |
100 |
----tgctaatgctgcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcct |
195 |
Q |
| |
|
|| | |||||||||| | |||| |||| | |||||||||||||||||||||||| ||||||| ||||||||| || ||| | || ||||| | |
|
|
| T |
2838800 |
ctgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttcttttcttgattccgtgagttgtcagcttgatgtctt |
2838899 |
T |
 |
| Q |
196 |
gaatttcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcat |
295 |
Q |
| |
|
|||| || ||||| || | |||||||||||||||||||||||| ||||| | || ||| |||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
2838900 |
gaatctctgatgcaattttgtgacggggaatcaaagttttgattaaccttggagtcatgca---taaagatctgcatccaggaggattggccctatgcat |
2838996 |
T |
 |
| Q |
296 |
tagccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838997 |
tagtcgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
2839048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 2818596 - 2818247
Alignment:
| Q |
1 |
gttcttcttttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctat |
100 |
Q |
| |
|
|||||||| | || ||||||| ||| || | ||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||| |||||| |
|
|
| T |
2818596 |
gttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagacagtcgaggatcacgccatcctcctgtgtctgactctccaca |
2818497 |
T |
 |
| Q |
101 |
gctaatgct---gcttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctga |
197 |
Q |
| |
|
| |||| || || | |||| |||| || |||||||| |||||||||||||| |||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
2818496 |
tccgttgctttggcacgaggatccttgttcatgcgaaatttggaagttatacctctcgcttctttccttgattccacgaattgacaacttgatgtcctga |
2818397 |
T |
 |
| Q |
198 |
atttcagatgctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcatta |
297 |
Q |
| |
|
|| || ||||| || | || ||||||| ||||||| || ||| |||| |||||||| || ||||||| |||| |||| |||||||||||| || | |
|
|
| T |
2818396 |
atctctgatgcaatttcataacggggagtcaaagtcttcattaatcttggaatcttgcataccaaagatctgcatcctggagaattggtcctatggatca |
2818297 |
T |
 |
| Q |
298 |
gccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2818296 |
aaagaaggtattcatcaatgacatcttcaatgcgaaatgatgcatctctc |
2818247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 299 - 347
Target Start/End: Complemental strand, 2755782 - 2755734
Alignment:
| Q |
299 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2755782 |
ccgaaggtattcatcaatgacatcttcaatgcgaaatgatgcttctctc |
2755734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 10 - 343
Target Start/End: Original strand, 6260 - 6596
Alignment:
| Q |
10 |
ttggaccttcaattccaacaacttctgtttcttcaataaaaagagaagacagtcgaggatcacgccattttccattttctctctctcctatgctaatgct |
109 |
Q |
| |
|
|||| ||||| | ||| |||||||| ||||||||||||||||| | ||| | |||||||||||||||| ||||||||||| ||||||| |||| |||| |
|
|
| T |
6260 |
ttgggccttcgaatcctacaacttcagtttcttcaataaaaagggcagataatcgaggatcacgccatcttccattttctgcctctcctgtgctgctgct |
6359 |
T |
 |
| Q |
110 |
g---cttgaagttcctcgttcgtgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgataatttaatgtcctgaatttcagat |
206 |
Q |
| |
|
| ||||| | ||| |||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||| | || ||||||||||| |||||| |
|
|
| T |
6360 |
gacacttgatgatccaggttcatgtaaaatttgaaagttatacctttcacttctgtccttgattccacgaattgacagctttatgtcctgaatctcagat |
6459 |
T |
 |
| Q |
207 |
gctatatgatgacggggaatcaaagttttgatttgccttgcaatcttgccgactaaagatccacatctaggaggattggtcctatgcattagccgaaggt |
306 |
Q |
| |
|
||||| ||||| | | |||||||||||||||| | ||| ||||||||| |||||| ||||| |||| |||||| |||| |||||| || |||||||||| |
|
|
| T |
6460 |
gctatctgatgctgagaaatcaaagttttgattaggcttacaatcttgcagactaatgatccgcatccaggagggttggccctatggatcagccgaaggt |
6559 |
T |
 |
| Q |
307 |
attcatcaatgacatcttcaatgcgaaatgatgcttc |
343 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6560 |
attcatcaataacatcttcaatgcgaaatgatgcttc |
6596 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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