View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13248_low_13 (Length: 242)
Name: NF13248_low_13
Description: NF13248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13248_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 41771327 - 41771463
Alignment:
| Q |
8 |
tataagtgtttgtgtataatgcaaaagtgtttgaaaaatatatatttagggcctttataaatacatgtcattttatattgaaattgtagtatcagattca |
107 |
Q |
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| T |
41771327 |
tataagtgtttgtgta--atgcaaaagtgtttgaaaaatatatatttagggcctttataaatacatgtcattttatattaaaattgtagtatcagattca |
41771424 |
T |
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| Q |
108 |
agcaagcacaaggtcttggattcaaagtttctttctata |
146 |
Q |
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| T |
41771425 |
agcaagcacaaggtcttggattcaaagtttctttctata |
41771463 |
T |
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