View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1324_high_26 (Length: 250)
Name: NF1324_high_26
Description: NF1324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1324_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 45550132 - 45549896
Alignment:
| Q |
1 |
cattcaaattgcaaaggaaggacaaacaatcacaaacaagcatattaagatgagcaatgaaaagaagtcccgggaccatatcgtggttcaaaagtcaatt |
100 |
Q |
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| T |
45550132 |
cattcaaattgcaaaagaaggacaaacaatcacagacaagcatattaagatgagcaatgaaaagaagtctcgggaccatatcgtggttcaaaagtcaatt |
45550033 |
T |
|
| Q |
101 |
atctccaaagacagagggagagaaatgacacccaggaattcatcaaaacaatccaccattaatcttcagaagaagaagaggcaatcattcataaaccaac |
200 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
45550032 |
atctccaaagacggagggagagaaatgacacccaggaattcatcaaaacaatccaccattaatcttcagaagaagaagaagcaatcattcataaaccaac |
45549933 |
T |
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| Q |
201 |
ccaccccgttcaagatatcacgtggtgatctagatat |
237 |
Q |
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|||| |||||||||||||||||||||||||||||||| |
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| T |
45549932 |
ccacaccgttcaagatatcacgtggtgatctagatat |
45549896 |
T |
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