View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1324_low_29 (Length: 260)
Name: NF1324_low_29
Description: NF1324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1324_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 231
Target Start/End: Complemental strand, 28872335 - 28872145
Alignment:
| Q |
43 |
ataatctgtaatagacaaaccttcaaaataactacatttttctatcaaatcattgattaacataacaaagaactaaaattaaaacaattagaacatcaaa |
142 |
Q |
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| T |
28872335 |
ataatctgtaatagacaaaccttcaaaataactacatttttatatcaaatcattgattaacataacaaagaactaaaattaaaacaattagaacatcaaa |
28872236 |
T |
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| Q |
143 |
acactaat--nnnnnnnnnnnnnncgaagacagaaacagagtaatagcgaactcaaaaaactagtgagttaaagatgatgaaccttattga |
231 |
Q |
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|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28872235 |
acactaataaaaaaaaaataaaaacgaagatagaaacagagtaatagcgaactcaaaaaactagtgagttaaagatgatgaaccttattga |
28872145 |
T |
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